View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19296_low_24 (Length: 237)
Name: NF19296_low_24
Description: NF19296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19296_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18768118 - 18768338
Alignment:
| Q |
1 |
ttagacggttcatgttttacatttgatttgatatattaaagtataaactctaatatttattcaacttgagatttgnnnnnnnggtgaacaactattgaga |
100 |
Q |
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| T |
18768118 |
ttagacggttcatgttttacatttgatttgatatattaaagtataaactctaatatttattcaacttgagatttgtttttttggtgaacaactattgaga |
18768217 |
T |
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| Q |
101 |
tctgttgattgcagcaatgaattttttggccggactgcaacagtgtgccataattggcatttcctgccccatactttctgataattatttttagggcccg |
200 |
Q |
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| T |
18768218 |
tctgttgattgcagcaatgaattttttggccggactgcagcagtgtgccataattggcatttcctgccccatactttctgataattatttttagggcccg |
18768317 |
T |
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| Q |
201 |
ccattgtcttcacctatatag |
221 |
Q |
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||||||||||||||||||||| |
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| T |
18768318 |
ccattgtcttcacctatatag |
18768338 |
T |
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