View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19297_high_2 (Length: 527)
Name: NF19297_high_2
Description: NF19297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19297_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 8 - 512
Target Start/End: Original strand, 34501379 - 34501897
Alignment:
| Q |
8 |
cgaagaatatcgactaggagataccgaattccagagcctctagataaacttcctacaaaggaaatagtgccagatctagcagatgcggcatttccaggat |
107 |
Q |
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| T |
34501379 |
cgaagaaaatcgactaggagataccgaattccagagcctctagataaacttcctacaaaggaaatagtgccagatctagcagatgcggcatttccaggat |
34501478 |
T |
|
| Q |
108 |
atgaagcagaccacaagcaaattccactcctgcatcagtaaacccaagtccagttaacaaaaaatccaatgacccaacaattgacactgtacaaccgagc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34501479 |
atgaagcagaccacaagcaaattccactcctgcatcagtaaacccaagtccagttaacaaaaaatccaatgacccaacaattgacattgtacaaccgagc |
34501578 |
T |
|
| Q |
208 |
acaaagacagaaactcacttgctaccaacagcaagcatcctcccaccattaggcctccactctaacacattaacatctctctgagactcgttggttaaaa |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501579 |
acaaagacagaaactcacttgctaccaacagcaagcatcctcccaccattaggcctccactctaacacattaacatctctctgagactcgttggttaaaa |
34501678 |
T |
|
| Q |
308 |
taatcgaatccttcccatctatttaaagtgtgaaactataagtgctaaaatcaaagcaaacactatccataac------taacaataacaaaagagcatt |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
34501679 |
taatcgaatccttcccatctatttaaagtgtgaaactataagtgctaaaatcaaagcaaacactatccataactaacaataacaataacaaaagagcatt |
34501778 |
T |
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| Q |
402 |
gttatttggcacgg-aaaaatccgcaccgaacatgcacaaagagattnnnnnnncaat-------ataaacaaacatggtgaggatggttttgaaacatt |
493 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |
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| T |
34501779 |
gttatttggcacggaaaaaatccgcaccgaacatgcacaaagagattaaaaaaacaatcagactgataaacatacatggtgaggatggttttgaaacatt |
34501878 |
T |
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| Q |
494 |
tacagcaatgggcataaac |
512 |
Q |
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||||||||| ||||||||| |
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| T |
34501879 |
tacagcaattggcataaac |
34501897 |
T |
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