View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19297_high_49 (Length: 253)
Name: NF19297_high_49
Description: NF19297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19297_high_49 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37741950 - 37742187
Alignment:
| Q |
1 |
cacttcactacaaccttcaacaattgcaggcacaacaactttagcatcacaagccatagcatcattgataagattgctatgattaagatttgaagcagcg |
100 |
Q |
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| T |
37741950 |
cacttcactacaaccttcaacaattgcaggcacaacaactttagcatcacaagccatagcatcattgataagattgctatgatcaagatttgaagcagca |
37742049 |
T |
|
| Q |
101 |
taatgccacacatcttcaccatgaaccttctcaaatgaaggatttccattaaccaaaacacgatcacttagactaagccaaggtgctaccattacaggac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37742050 |
taatgccacacatcttcaccatgaaccttctcaaatgaaggatttccattaaccaaaacacgatcacttagactaagccaaggtgctaccattacaggac |
37742149 |
T |
|
| Q |
201 |
tactctctaataaaagaaaagcagccatgctatgttca |
238 |
Q |
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|||||||||||||||||| |||| |||||||||||||| |
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| T |
37742150 |
tactctctaataaaagaatagcaaccatgctatgttca |
37742187 |
T |
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