View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19298_high_11 (Length: 334)
Name: NF19298_high_11
Description: NF19298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19298_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 36422680 - 36423005
Alignment:
| Q |
1 |
ttcaacaaagaagctctagactgcaacatcttctctggatggtgcacctcaaagaaccgttttcaatcttcaaatccaatccacaaaccatccttctcca |
100 |
Q |
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| T |
36422680 |
ttcaacaaagaagctctagactgcaacatcttctctggatggtgcacctcaaagaaccgttttcaatcttcaaatccaatccacaaaccatccttctcca |
36422779 |
T |
|
| Q |
101 |
ctcgccatcaacaaccaaaccatgaatccgatgaacctcgccaccctttagaccctctaaccatccaagaattcaacaaagttcgtgcgatcctctcgac |
200 |
Q |
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| T |
36422780 |
ctcgccgtcaacaaccaaaccatgaatccgatgaacctcgccaccctttagaccctctaaccatccaagaattcaacaaagttcgtgcgatcctctcgac |
36422879 |
T |
|
| Q |
201 |
acaccctctttttaagtcctcaaacagttacactctcaattccattgttctagaagaaccagacaaagaacttgtcctcaaatggaaaaatggtcaacca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36422880 |
acaccctctttttaagtcctcaaacagttacactctcaattccattgttctagaagaaccagacaaagaacttgtcctcaaatggaaaaatggtcaacca |
36422979 |
T |
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| Q |
301 |
ttacttcctaggaaagcctctgtggt |
326 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36422980 |
ttacttcctaggaaagcctctgtggt |
36423005 |
T |
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