View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19299_high_11 (Length: 327)
Name: NF19299_high_11
Description: NF19299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19299_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 7360213 - 7360496
Alignment:
| Q |
16 |
acaaataccaacatatttgttcctaacaaattttcaaaatcatcccgtgtaatgtttctgtcagatgtgaccgagaaaccatcaacttttaaatccaata |
115 |
Q |
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| T |
7360213 |
acaaataccaacatatttgttcctaacaaattttcaaaatcatcccgtgtaatgtt-------------accgagaaaccatcaacttttaaatccaata |
7360299 |
T |
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| Q |
116 |
tcatatgaatgtcctcgaacgttattgtacattcaccgttggaagaataaatgtgtgcatctcaggtcgccggtgttcaagtaatgcacctgttgcaatc |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
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| T |
7360300 |
tcatatgaatgtcctcgaacgttattgtacattcaccgttggaagaataaatgtgtgcatctcaggtcgccagtgttcaagcaatgcacctgttgcaatc |
7360399 |
T |
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| Q |
216 |
taatttgaaatttgttattttcgttggcatcaaaagaccgacttgctctacatatagagatatgcaacaaaaaatgcgccttattttcacgtcttat |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |
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| T |
7360400 |
taatttgaaatttgttattttcgttggcatcaaaagaccgacttgctctacatatagagatatgcaacaaaaaatacgccttattttaacgacttat |
7360496 |
T |
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