View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1929_low_11 (Length: 386)
Name: NF1929_low_11
Description: NF1929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1929_low_11 |
 | |
|
| [»] scaffold0590 (1 HSPs) |
| | |
|
| [»] scaffold0275 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0053 (1 HSPs) |
| | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 327; Significance: 0; HSPs: 28)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 40 - 370
Target Start/End: Complemental strand, 34975390 - 34975060
Alignment:
| Q |
40 |
caggatagcttacgaaaacaatttatagcttatactttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34975390 |
caggatagcttacgaaaacaatttatagcttatactttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
34975291 |
T |
|
| Q |
140 |
gcaaacacttaattaagctgataatccaaacattagtgttattatctatctagttaaaagggtataaaataacataccataaatatatccagcaagatca |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34975290 |
acaaacacttaattaagctgataatccaaacattagtgttattatctatctagttaaaagggtataaaataacataccataaatatatccagcaagatca |
34975191 |
T |
|
| Q |
240 |
cggtatctaatatgtcttgtcccaccaaattcatgaagcatagcaataagagcatttgcataaagtgaaattgcagttgcaagaatcaaaccaacaacac |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34975190 |
cggtatctaatatgtcttgtcccaccaaattcatgaagcatagcaataagagcatttgcataaagtgaaattgcagttgcaagaatcaaaccaacaacac |
34975091 |
T |
|
| Q |
340 |
caccaatccaacccaaaggaaccataatggt |
370 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
34975090 |
caccaatccaacccaaaggaaccataatggt |
34975060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7319471 - 7319399
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||||||||| || |||||||||| || |||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
7319471 |
tgtctataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttata |
7319399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14295571 - 14295499
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| ||| | |||||||||||||||||||| |||||||||||| |
|
|
| T |
14295571 |
tgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttata |
14295499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 37063165 - 37063205
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37063165 |
actttattttatcttttgttatagaaatagtttatacataa |
37063205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 7096218 - 7096263
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
7096218 |
actttattttatcttttgttatagaaatagcttatacataagcact |
7096263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 11095560 - 11095605
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11095560 |
actttattgtatcatttgttatagaaatagtttatacataatcact |
11095605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 12407751 - 12407792
Alignment:
| Q |
72 |
tactttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
12407751 |
tactttattttatcttttgttatagaaatagcttatacataa |
12407792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 13224406 - 13224326
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaag |
156 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||| |||| || ||||||| ||||||||||| | |||| ||||| |
|
|
| T |
13224406 |
tttattttatcttttgttatagaaatagcttatacataagcacttctatgataactg-ttatgctgcaagcgcttatttaag |
13224326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18906407 - 18906338
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagctt |
70 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| ||||| || ||| ||||||||| ||||||| |||||||||| |
|
|
| T |
18906407 |
tgtccataagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaacagtttatagctt |
18906338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 6593279 - 6593239
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
6593279 |
actttattttatcttttgttatagaaattgtttatacataa |
6593239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 28586857 - 28586897
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
28586857 |
actttattttatcttttgttatagaaatagtgtatacataa |
28586897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 108
Target Start/End: Complemental strand, 7853637 - 7853602
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttata |
108 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7853637 |
actttattttatcttttgttatagaaatagtttata |
7853602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 42583128 - 42583089
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
42583128 |
actttatttcatcttttgttatagaaataccttatacata |
42583089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 20982226 - 20982324
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctgataatccaaaca |
171 |
Q |
| |
|
||||||||| ||| |||||||||||||||| |||||||||| |||| | || |||| |||||||| || |||||||| ||| || | ||||||||| |
|
|
| T |
20982226 |
actttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatccaaaca |
20982324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 10303780 - 10303747
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagttta |
106 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
10303780 |
actttattttatcttttgttatagaaatagttta |
10303747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 10391366 - 10391266
Alignment:
| Q |
41 |
aggatagcttacgaaaacaatttatagcttatact--ttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgc |
138 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| |||||| ||||||||||||| |||||| |||||| ||| |||| | || |||| || |||||| |
|
|
| T |
10391366 |
aggatagcttataaaaacaaattatagcttatatgacttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtgtttatgc |
10391267 |
T |
|
| Q |
139 |
t |
139 |
Q |
| |
|
| |
|
|
| T |
10391266 |
t |
10391266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 11054166 - 11054125
Alignment:
| Q |
72 |
tactttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
11054166 |
tactttattttatcttttattatagaaatagcttatacataa |
11054125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 11835256 - 11835211
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||| |||| |||||||||||| |||| |
|
|
| T |
11835256 |
actttattttatcttttgttataaaaatggtttatacataaacact |
11835211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 12460094 - 12460131
Alignment:
| Q |
76 |
ttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
12460094 |
ttattttatcttttgttatagaaatagcttatacataa |
12460131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 35095874 - 35095907
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagttta |
106 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
35095874 |
actttattttatcttttgttatagaaatagttta |
35095907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 35135753 - 35135798
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| |||| |
|
|
| T |
35135753 |
actttattttatcttttgttatagaaatatcttatacataaacact |
35135798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 14714943 - 14714975
Alignment:
| Q |
86 |
ttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
14714943 |
ttttgttatagaaatagcttatacataatcact |
14714975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15074754 - 15074822
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagct |
69 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||| || ||| ||| |||| |||||||| |||||||| |
|
|
| T |
15074754 |
tgtccataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagct |
15074822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 32172632 - 32172592
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
32172632 |
acttcattttatcttttgttgtagaaatagtttatacataa |
32172592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 34690853 - 34690813
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
34690853 |
actttattttatcttttgttatagaaatagcgtatacataa |
34690813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 35960393 - 35960353
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
35960393 |
actttattttatcttttattatagaaatagtttatgcataa |
35960353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 36638715 - 36638687
Alignment:
| Q |
83 |
atcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36638715 |
atcttttgttatagaaatagtttatacat |
36638687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 39128618 - 39128578
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||| ||| |||||||||| |
|
|
| T |
39128618 |
actttattttatcttttgttatagaattagcttatacataa |
39128578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 28)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34035198 - 34035262
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttat |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34035198 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaacttat |
34035262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6231821 - 6231893
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| ||||| |
|
|
| T |
6231821 |
tgtccataaactgttttcagcttatttctataagttcttcaggttagcttacgaaaacagcttatagattata |
6231893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 24857621 - 24857691
Alignment:
| Q |
89 |
tgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctg |
159 |
Q |
| |
|
||||||||||||||||||||||||| |||| | || || | |||||||| | ||| ||||||||||||||| |
|
|
| T |
24857621 |
tgttatagaaatagtttatacataaacacttatatgattagtgcttatgatacaagcacttaattaagctg |
24857691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 37842365 - 37842431
Alignment:
| Q |
6 |
ataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttat |
72 |
Q |
| |
|
|||||| |||||||||||| || |||||||| ||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
37842365 |
ataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat |
37842431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 7028271 - 7028231
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
7028271 |
actttattttatcttttgctatagaaatagtttatacataa |
7028231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 23895313 - 23895249
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||| ||| | || |||| ||||||||| |
|
|
| T |
23895313 |
tttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgct |
23895249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 50319271 - 50319231
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
50319271 |
actttattttatcttttgttatagaaatagcttatacataa |
50319231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 112
Target Start/End: Original strand, 37842446 - 37842485
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
37842446 |
actttatttcatcttttgctatagaaatagcttatacata |
37842485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 4025075 - 4025037
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
4025075 |
tttatttcatcttttgttacagaaatagtttataaataa |
4025037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 37591409 - 37591371
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
37591409 |
tttattttatcttttattatagaaatagtttatacataa |
37591371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 871024 - 870979
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
871024 |
acttaattttatcttttgttataaaaatagtttatacataagcact |
870979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 7120129 - 7120084
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||| |||| |||| |
|
|
| T |
7120129 |
actttatttgatcttttgttatataaatagtttatatataagcact |
7120084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 37175961 - 37176006
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| | |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
37175961 |
actttattttacctttggttatagaaatagtttatatataatcact |
37176006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 39270516 - 39270561
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||| ||||| ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
39270516 |
acttaatttcctcttttgttgtggaaatagtttatacataatcact |
39270561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39347972 - 39348041
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagctt |
70 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| ||||| || |||||||| ||| |||||||| ||||||||| |
|
|
| T |
39347972 |
tgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagctt |
39348041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 172668 - 172708
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
172668 |
actttatgttatcttttgttatagaaatagcttatacataa |
172708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 1725205 - 1725241
Alignment:
| Q |
76 |
ttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
1725205 |
ttattttatcttttattatagaaatagtttatacata |
1725241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 4276727 - 4276763
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatac |
109 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
4276727 |
actttatattatcttttgttatagaaatagtttatac |
4276763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 4549845 - 4549805
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
4549845 |
actttattttatcttttgttatagaaatagcttgtacataa |
4549805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 4700157 - 4700197
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
4700157 |
actttattttatcttttgttatagaaatagcttgtacataa |
4700197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 5756777 - 5756813
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatac |
109 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
5756777 |
actttatatcatcttttgttatagaaatagcttatac |
5756813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 6074453 - 6074417
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatac |
109 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
6074453 |
actttatatcatcttttgttatagaaatagcttatac |
6074417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 6659677 - 6659637
Alignment:
| Q |
78 |
atttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||| |||| |
|
|
| T |
6659677 |
attttatcttttgctatagaaatagtttatacataagcact |
6659637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 17420182 - 17420142
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||||||||| |
|
|
| T |
17420182 |
actttattttatcttttcttataaaaatagtttatacataa |
17420142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 26184730 - 26184690
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
26184730 |
actttattttaccttttcttatagaaatagtttatacataa |
26184690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 34290296 - 34290228
Alignment:
| Q |
6 |
ataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttatac |
74 |
Q |
| |
|
||||| ||||||||||||| || ||||||| ||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
34290296 |
ataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac |
34290228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 36151596 - 36151636
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||| ||||||| |||||||||| |
|
|
| T |
36151596 |
actttattttatcttttgttattgaaatagcttatacataa |
36151636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 48748674 - 48748713
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
48748674 |
actttatttcatcttttg-tatagaaatagcttatacataa |
48748713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 370
Target Start/End: Complemental strand, 31320849 - 31320701
Alignment:
| Q |
222 |
atatatccagcaagatcacggtatctaatatgtcttgtcccaccaaattcatgaagcatagcaataagagcatttgcataaagtgaaattgcagttgcaa |
321 |
Q |
| |
|
||||||||||||||||| | ||||||||| ||||||||||| ||| ||||||| ||||||||||| |||||||| ||||| |||||||| || | |||| |
|
|
| T |
31320849 |
atatatccagcaagatctctgtatctaatgtgtcttgtccctccatattcatggagcatagcaatgagagcattagcatagagtgaaatcgccgcagcaa |
31320750 |
T |
|
| Q |
322 |
gaatcaaaccaacaacaccaccaatccaacccaaaggaaccataatggt |
370 |
Q |
| |
|
||| | |||||| ||||| || | ||| |||| |||||||||||||| |
|
|
| T |
31320749 |
gaacaagaccaactacacctcctacccatcccagtggaaccataatggt |
31320701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 25776177 - 25776072
Alignment:
| Q |
6 |
ataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttat---actttatttcatcttttgttatagaaatag |
102 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| ||| || | |||| |||||||| |||||||| || | ||||||||||||||||||||| |||||| |
|
|
| T |
25776177 |
ataagctgttttcagcttacttccataagttcttcaagacaacttatgaaaacaacttatagctaatttaaatttatttcatcttttgttataaaaatag |
25776078 |
T |
|
| Q |
103 |
tttata |
108 |
Q |
| |
|
||||| |
|
|
| T |
25776077 |
cttata |
25776072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 24605107 - 24605152
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
24605107 |
actttatttcatcttttgttatagaaataacttatacataaacact |
24605152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 2128342 - 2128382
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
2128342 |
actttattttatcttttgttatagaaatagcttatacataa |
2128382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 48597690 - 48597766
Alignment:
| Q |
83 |
atcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctg |
159 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| | ||||||| || || |||| || | ||||||||||||| |
|
|
| T |
48597690 |
atcttttgttatagaaatagtttaaacataagcacttacataataagtgattgtgctataagcgcttaattaagctg |
48597766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 1395650 - 1395611
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
1395650 |
actttattttatcttttgttatagaaatagcttatacata |
1395611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 25183071 - 25183117
Alignment:
| Q |
64 |
atagcttatactttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
25183071 |
atagctta-actttatttaatcttttgttataaaaatagtttatacat |
25183117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 33883007 - 33882969
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
33883007 |
actttattttatcttttgttatagaaataatttatacat |
33882969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 2304336 - 2304377
Alignment:
| Q |
77 |
tatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
2304336 |
tattttatcttttattatagaaatagcttatacataatcact |
2304377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 20192697 - 20192742
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||| |||||| |||||||||| |||| |
|
|
| T |
20192697 |
actttattttatcttttgttatataaatagcttatacataagcact |
20192742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 41028942 - 41028987
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| |||| |
|
|
| T |
41028942 |
actttattttttcttttgttatagaaatagcttatacataagcact |
41028987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 905061 - 905097
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatac |
109 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
905061 |
actttattttatcttttgttatagaaatagcttatac |
905097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 13804753 - 13804717
Alignment:
| Q |
87 |
tttgttatagaaatagtttatacataatcactcaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
13804753 |
tttgttatagaaatagtttatacataaacacttaaat |
13804717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 23793567 - 23793528
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
23793567 |
actttattttatcttttgttata-aaatagtttatacataa |
23793528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30923903 - 30923935
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataa |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
30923903 |
tgtctataagctgttttcagcttatttctataa |
30923935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 33725888 - 33725952
Alignment:
| Q |
10 |
gctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttatac |
74 |
Q |
| |
|
|||||||||| |||| ||||||||| || |||||||| ||| |||||| |||||||||||||| |
|
|
| T |
33725888 |
gctgttttcatcttatttctataagctttccaggatagtttataaaaacagtttatagcttatac |
33725952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 34958307 - 34958267
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||| ||||| |
|
|
| T |
34958307 |
actttattttatcttgtgttatagaaatagtttattcataa |
34958267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 35394792 - 35394832
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
35394792 |
actttattttatcttttattatagaaatagattatacataa |
35394832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 36445711 - 36445671
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
36445711 |
actttattttctcttttgttatagaaatagcttatacataa |
36445671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 40122843 - 40122883
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||| ||||||| |||||||||| |
|
|
| T |
40122843 |
actttattttatcttttgttattgaaatagcttatacataa |
40122883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 52450143 - 52450183
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
52450143 |
actttatttcatcttttgttatagaaattgcttatgcataa |
52450183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 753295 - 753393
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctgataatccaaaca |
171 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||| || | || | || |||| || ||||||| ||||||||||||||| || | ||||||||| |
|
|
| T |
753295 |
actttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataaatgtttatgctataaacacttaattaagttgtttatccaaaca |
753393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 25511606 - 25511569
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25511606 |
actttatttcatcttttgttatagaaataatttataca |
25511569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 30496683 - 30496638
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||| |||| |
|
|
| T |
30496683 |
actttattttatattttgttatagaaatagtttatacataaacact |
30496638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 1417243 - 1417203
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
1417243 |
actttattttatcttttgttatataaatagtttatacataa |
1417203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44151485 - 44151557
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| ||||| || ||| ||||| ||| |||||||| |||||||||||| |
|
|
| T |
44151485 |
tgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttata |
44151557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 110
Target Start/End: Complemental strand, 46086420 - 46086389
Alignment:
| Q |
79 |
tttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
46086420 |
tttcatcttttgttatagaaatagtttataca |
46086389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 47007025 - 47006982
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
47007025 |
tttatttgatcttttgttatagaaaaagtttatacataagcact |
47006982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 107
Target Start/End: Complemental strand, 1792472 - 1792438
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttat |
107 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1792472 |
actttatttcatcatttgttatagaaatagtttat |
1792438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 27492772 - 27492734
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
27492772 |
tttatttgaacttttgttatagaaatagtttatacataa |
27492734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 28178948 - 28178910
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
28178948 |
actttattttatcttttgttatagaaatagcttatacat |
28178910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 33894599 - 33894557
Alignment:
| Q |
76 |
ttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
33894599 |
ttattttatcttttgttatagaaatagcttatacataagcact |
33894557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 2727452 - 2727489
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
2727452 |
ctttattttatcttttgttatagaaatagtctatacat |
2727489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3610745 - 3610818
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttatac |
74 |
Q |
| |
|
|||| |||||| ||||||||||| ||||||||| | ||||||| |||||||||||| ||||||||||||| |
|
|
| T |
3610745 |
tgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttatac |
3610818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 5373204 - 5373159
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
5373204 |
actttattttatcttttgttatagaaatagcatatacataagcact |
5373159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 35808999 - 35809040
Alignment:
| Q |
77 |
tatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
35808999 |
tattttatcttttgttatagaaatagcttatacataaacact |
35809040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 43152993 - 43153030
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
43152993 |
actttattttatcttttgttatagaaatagcttataca |
43153030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 5272911 - 5272951
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
5272911 |
acttaattttatcttttgttatataaatagtttatacataa |
5272951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 29574692 - 29574732
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
29574692 |
actttatttcatcttttgtcataaaaatagcttatacataa |
29574732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 31341173 - 31341133
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
31341173 |
actttattttatcttttgttatacaaatagcttatacataa |
31341133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 35536086 - 35536046
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
35536086 |
actttattttatcttatgttatagaaatagcttatacataa |
35536046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 42656494 - 42656454
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
42656494 |
actttattttatcttttgttatagaaatagcttatatataa |
42656454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 44241911 - 44241851
Alignment:
| Q |
14 |
ttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttatac |
74 |
Q |
| |
|
||||||||||| ||||||||| | ||| ||||||||| |||||||| |||||| |||||| |
|
|
| T |
44241911 |
ttttcagcttatttctataagctattcaagatagcttatgaaaacaacttataggttatac |
44241851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 49060519 - 49060479
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
49060519 |
actttattttattttttgttatagaaatagcttatacataa |
49060479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 14482181 - 14482136
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14482181 |
actttattttatcttttgttatagaaatagtttatacataagcact |
14482136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 112
Target Start/End: Original strand, 39392752 - 39392791
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39392752 |
actttattttatcttttgttatagaaatagtttatacata |
39392791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 39561554 - 39561612
Alignment:
| Q |
9 |
agctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatag |
67 |
Q |
| |
|
|||||||||||||||| ||| ||||| || ||| |||||||||||||||||| |||||| |
|
|
| T |
39561554 |
agctgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatag |
39561612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 12972833 - 12972752
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaag |
156 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||||||||| |||| | || |||| |||||||||| || | |||||||||| |
|
|
| T |
12972833 |
tttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgcttaattaag |
12972752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 42597381 - 42597340
Alignment:
| Q |
72 |
tactttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
42597381 |
tactttattttatcttttgttatagaaatagcttatacataa |
42597340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 26215475 - 26215435
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
26215475 |
actttattttatcttttgttatagaaatagcttatacataa |
26215435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 4558777 - 4558722
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataa |
128 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |||| | ||||||| |
|
|
| T |
4558777 |
actttattttatcttttattatagaaatagcttatacataaacacttacataataa |
4558722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 102
Target Start/End: Complemental strand, 25867065 - 25867036
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
25867065 |
actttatttcatcttttgttatagaaatag |
25867036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 40598944 - 40598985
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataat |
114 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| ||||||||||| |
|
|
| T |
40598944 |
actttattccatcttttgttttagaaatagcttatacataat |
40598985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 7646033 - 7645973
Alignment:
| Q |
11 |
ctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagctta |
71 |
Q |
| |
|
|||||||||||||| ||| ||||| || |||| ||||||| |||||||| |||||||||| |
|
|
| T |
7646033 |
ctgttttcagcttatttccataagctttacaggttagcttatgaaaacaacttatagctta |
7645973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 37353340 - 37353379
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
37353340 |
actttattt-atcttttgttatagaaatagtttgtacataa |
37353379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 4471149 - 4471084
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| ||||| |||| | ||||||| |||||||||| |
|
|
| T |
4471149 |
ctttattttatcttttgttataaaaatagtttatgcataagcacttatataataattgcttatgct |
4471084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 26520320 - 26520360
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26520320 |
actttatttcatcttttgttatagaaacagtttatacataa |
26520360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 41050675 - 41050637
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41050675 |
acttcatttcatcttttgttatagaaatagtttatacat |
41050637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 21593102 - 21593147
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
21593102 |
actttattttatctttagttatagaaatagtttatacataagcact |
21593147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 21683570 - 21683615
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21683570 |
actttatcttatcttttgttatagaaatagtttatacataaacact |
21683615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 51044550 - 51044595
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
51044550 |
actttattttatcttttgttatagaaatagcttatacataaacact |
51044595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 6364128 - 6364088
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
6364128 |
actttattttatcttttgttatagaaatagcttatacataa |
6364088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 30338683 - 30338723
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30338683 |
actttattctatcttttgttatagaaatagtttatacataa |
30338723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 41088364 - 41088280
Alignment:
| Q |
72 |
tactttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaag |
156 |
Q |
| |
|
|||||||||| |||||||||| | ||||||||||||||||| |||| | || | || | ||||||||||||| |||||||||| |
|
|
| T |
41088364 |
tactttattttatcttttgttgtgaaaatagtttatacataagcacttatatgaaaaatatttatgctgcaaacgcttaattaag |
41088280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 45128406 - 45128441
Alignment:
| Q |
78 |
atttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |
|
|
| T |
45128406 |
attttatcttttgttatagaaatagtttatacataa |
45128441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 44319928 - 44319863
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| | |||| | || |||| |||||||||| |
|
|
| T |
44319928 |
actttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataagtgcttatgct |
44319863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 4798650 - 4798695
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
4798650 |
actttattttatcttttgatatagaaatagcttatacataagcact |
4798695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 8422928 - 8423025
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctgataatccaaac |
170 |
Q |
| |
|
||||||||| ||||||| ||||| |||||| |||||||||| ||| | || ||| || ||||||| ||||||||||||||| || | |||||||| |
|
|
| T |
8422928 |
actttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataaacacttaattaagttgtttatccaaac |
8423025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 24929472 - 24929435
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
24929472 |
actttattttatcttttgttatagaaatagttcataca |
24929435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 47970297 - 47970252
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||| |||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
47970297 |
acttcattttatcttttgttatagaaatagcttatacataagcact |
47970252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 54277405 - 54277442
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
54277405 |
actttattttatcttttgttatagaagtagtttataca |
54277442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 54325128 - 54325165
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
54325128 |
actttattttatcttttgtaatagaaatagtttataca |
54325165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 54575679 - 54575720
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataat |
114 |
Q |
| |
|
||||| ||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
54575679 |
actttgttttatcttttgttatagaaaaagtttatacataat |
54575720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 11264278 - 11264214
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||||||||||||||| | || ||| |||||||||| |
|
|
| T |
11264278 |
tttattttatcttttattagtgaaatagtttatacataatcacttatatgatatgtgcttatgct |
11264214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 18630659 - 18630619
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
18630659 |
actttattttatcttttgttattgaaatagtttatgcataa |
18630619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 20936093 - 20936129
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatac |
109 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
20936093 |
actttattttatcttttgttatagaaatagtctatac |
20936129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 24370963 - 24371027
Alignment:
| Q |
6 |
ataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagctt |
70 |
Q |
| |
|
|||||| |||||||||||| |||||||| | | ||||||||||| |||||||| ||||||||| |
|
|
| T |
24370963 |
ataagccgttttcagcttatttctataaactatttaggatagcttatgaaaacaacttatagctt |
24371027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 25487636 - 25487676
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
25487636 |
actttattttattttttgttatagaaatagcttatacataa |
25487676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 45128323 - 45128387
Alignment:
| Q |
9 |
agctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||||||||||||||| ||| ||||| || |||| || ||| ||||||||||||||||||||| |
|
|
| T |
45128323 |
agctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttatagcttata |
45128387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50800035 - 50800106
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
|||||||||||||||||||||||| ||| | ||||| || ||||||||| ||||||| |||||||||||| |
|
|
| T |
50800035 |
tgtctataagctgttttcagcttatttcca-aagttctccatgatagcttaagaaaacagcttatagcttata |
50800106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 33068655 - 33068750
Alignment:
| Q |
76 |
ttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctgataatccaaaca |
171 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||| || | | | |||| ||||||||| |||||||||||||||||| | ||||||||| |
|
|
| T |
33068655 |
ttattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacacttaattaagctgttcatccaaaca |
33068750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 507199 - 507154
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
507199 |
actttattttatcttttgttatagaaataatttatacataagcact |
507154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 7354181 - 7354145
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacat |
111 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7354181 |
tttattttatcttttgttatagaaatagtttatacat |
7354145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 31420919 - 31420851
Alignment:
| Q |
91 |
ttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctg |
159 |
Q |
| |
|
|||||||||||| ||||| |||| |||| | ||||||| || ||||||| |||||||||||||||||| |
|
|
| T |
31420919 |
ttatagaaatagcttataaataaacacttatataataaatgattatgctataaacacttaattaagctg |
31420851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 3169338 - 3169381
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||| |||| |
|
|
| T |
3169338 |
tttatttcatcttttgttatagaaataggttacacataagcact |
3169381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 8349755 - 8349838
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaag |
156 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||| || |||| | || |||| || ||||||| || | |||||||||| |
|
|
| T |
8349755 |
actttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaattaag |
8349838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 2514681 - 2514636
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |||| |
|
|
| T |
2514681 |
actttattttatcttttattatagaaatagcttatacataagcact |
2514636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 20671956 - 20672001
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
20671956 |
actttattttatcttttgatctagaaatagcttatacataatcact |
20672001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 24774737 - 24774692
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| |||| |||| |
|
|
| T |
24774737 |
actttattttatattttgttatagaaatagtttatatataagcact |
24774692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 29269875 - 29269838
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttataca |
110 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
29269875 |
actttattttatcttctgttatagaaatagtttataca |
29269838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 31337986 - 31337917
Alignment:
| Q |
89 |
tgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagct |
158 |
Q |
| |
|
||||||||||||||||||||||||| ||| | | ||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
31337986 |
tgttatagaaatagtttatacataagtacttatacaataagcgcttatgctataaacatttaattaagct |
31337917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 31461647 - 31461594
Alignment:
| Q |
83 |
atcttttgttatagaaatagtttatacataatcactcaaataataactgcttat |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| | | ||||| ||||||| |
|
|
| T |
31461647 |
atcttttgttatagaaatagcttatacataagcacttatacaataagtgcttat |
31461594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 31668789 - 31668842
Alignment:
| Q |
86 |
ttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| | || |||| |||||||||| |
|
|
| T |
31668789 |
ttttgttatagaaatagcttatacataagcacttatatgataattgcttatgct |
31668842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 33911372 - 33911417
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||||||||| |||||| |||||||||| |||| |
|
|
| T |
33911372 |
actttatttgatcttttgttataaaaatagattatacataaacact |
33911417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 430467 - 430507
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
430467 |
actttatttcatctttttatatagaaatagcttatacataa |
430507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 4420596 - 4420556
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||| ||| |||||||||| |
|
|
| T |
4420596 |
actttattttatcttttgttatagaagtagcttatacataa |
4420556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 6310315 - 6310355
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||||||| |
|
|
| T |
6310315 |
actttacttcatcttttgttatagaaattgattatacataa |
6310355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 24836290 - 24836330
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
24836290 |
actttattttatcttttgttatagaaataacttatacataa |
24836330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 29274320 - 29274360
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
29274320 |
actttattttatcttttgctatagaaatagcttatacataa |
29274360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 33787836 - 33787876
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||||| |
|
|
| T |
33787836 |
actttgttttatattttgttatagaaatagtttatacataa |
33787876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 12215786 - 12215740
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactc |
119 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
12215786 |
actttattttatcttttgttgtagaaatagtttatacataagcactc |
12215740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 41240968 - 41241033
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgc |
138 |
Q |
| |
|
||||||||| || ||||||||||| |||||||||||||||| |||||| || ||| ||||||||| |
|
|
| T |
41240968 |
actttattttatattttgttataggaatagtttatacataaccactcacatggtaagtgcttatgc |
41241033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32821874 - 32821806
Alignment:
| Q |
1 |
tgtctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagct |
69 |
Q |
| |
|
|||| ||||||||||||||| ||| ||||||||| | | ||||||||||| ||||||| ||||||||| |
|
|
| T |
32821874 |
tgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatagct |
32821806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 37034023 - 37033983
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
37034023 |
actttattttatctttttttatagaaatagtttatacataa |
37033983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 5133750 - 5133711
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
5133750 |
ctttattttatcttttgttatagaaatagcttatacataa |
5133711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 15173505 - 15173466
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacata |
112 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15173505 |
actttatttcatcttttgttatagaaataacttatacata |
15173466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 118
Target Start/End: Original strand, 26522725 - 26522760
Alignment:
| Q |
83 |
atcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26522725 |
atcttttgttatagaaatagtttatacataagcact |
26522760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 38239642 - 38239725
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaag |
156 |
Q |
| |
|
|||| |||| |||||||||||||||||||| |||||||||| |||| | || || | |||||||||| ||| |||||||||| |
|
|
| T |
38239642 |
acttgattttatcttttgttatagaaatagcttatacataaacacttacatgatgagtgcttatgctacaagtgcttaattaag |
38239725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 5045248 - 5045298
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcactcaaat |
123 |
Q |
| |
|
||||||||| ||||||||||||| |||||| |||||||||| |||| |||| |
|
|
| T |
5045248 |
actttattttatcttttgttataaaaatagcttatacataaacacttaaat |
5045298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 42974319 - 42974233
Alignment:
| Q |
85 |
cttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctgcaaacacttaattaagctgataatccaaaca |
171 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| | || |||| || ||||||| || | |||||||||| || | ||||||||| |
|
|
| T |
42974319 |
cttttgttatagaaatagtttatacacaagcactaatatgataagtgtttatgctataagctcttaattaagttgcttatccaaaca |
42974233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 11393747 - 11393812
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||||| |||| |||| |||| || ||||||| |
|
|
| T |
11393747 |
ctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgct |
11393812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 11410408 - 11410473
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgct |
139 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||||| |||| |||| |||| || ||||||| |
|
|
| T |
11410408 |
ctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgct |
11410473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 11513960 - 11513891
Alignment:
| Q |
4 |
ctataagctgttttcagcttaattctataagtttgtcaggatagcttacgaaaacaatttatagcttata |
73 |
Q |
| |
|
||||||||| ||||||||||| ||| | ||||| || ||||||||| |||||||| |||||||||||| |
|
|
| T |
11513960 |
ctataagctattttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttata |
11513891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 13864629 - 13864584
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| | |||||||||||||||||| |||||||||| |||| |
|
|
| T |
13864629 |
actttattttaccttttgttatagaaatagcttatacataaacact |
13864584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 14277985 - 14278030
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| || ||| |||||||||||||||||||||||| |||| |
|
|
| T |
14277985 |
actttatttaatgtttagttatagaaatagtttatacataagcact |
14278030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 25609775 - 25609730
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |||| |
|
|
| T |
25609775 |
actttattttatcttttcttatagaaatagcttatacataagcact |
25609730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 31461417 - 31461372
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||| |||| |
|
|
| T |
31461417 |
actttattttatcttttgttatagaaatagcttatatataaccact |
31461372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 41809345 - 41809374
Alignment:
| Q |
84 |
tcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
41809345 |
tcttttgttatagaaatagtttatacataa |
41809374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 13866868 - 13866828
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
|||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
13866868 |
acttaattttatcttttgctatagaaatagtttatacataa |
13866828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 17952792 - 17952832
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
17952792 |
actttattttatcttttgttatagaaatagcttatatataa |
17952832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 32098399 - 32098439
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataa |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
32098399 |
actttattttatcttttgttatagaaatagcttatatataa |
32098439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 34054993 - 34055037
Alignment:
| Q |
74 |
ctttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
34054993 |
ctttattttatcttttgttatagaaatagcctatacataagcact |
34055037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0590 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0590
Description:
Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 1165 - 1210
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
1165 |
actttattttatcttttgttatagaaatagcttatacataagcact |
1210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0275
Description:
Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 2810 - 2765
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
2810 |
actttattttatcttttgttatagaaatagcttatacataagcact |
2765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 6741 - 6791
Alignment:
| Q |
86 |
ttttgttatagaaatagtttatacataatcactcaaataataactgcttat |
136 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | || |||| ||||||| |
|
|
| T |
6741 |
ttttgttatagaaatagtttatacataagcacttatatgataagtgcttat |
6791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 116660 - 116710
Alignment:
| Q |
86 |
ttttgttatagaaatagtttatacataatcactcaaataataactgcttat |
136 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | || |||| ||||||| |
|
|
| T |
116660 |
ttttgttatagaaatagtttatacataagcacttatatgataagtgcttat |
116710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 20158 - 20113
Alignment:
| Q |
73 |
actttatttcatcttttgttatagaaatagtttatacataatcact |
118 |
Q |
| |
|
||||||||| |||||| |||||||||||||| ||||||||| |||| |
|
|
| T |
20158 |
actttattttatctttggttatagaaatagtatatacataagcact |
20113 |
T |
|
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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 23888 - 23855
Alignment:
| Q |
75 |
tttatttcatcttttgttatagaaatagtttata |
108 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
23888 |
tttatttcatcttttgttatagaaatagcttata |
23855 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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