View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19300_low_2 (Length: 401)

Name: NF19300_low_2
Description: NF19300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19300_low_2
NF19300_low_2
[»] chr6 (60 HSPs)
chr6 (23-384)||(6843110-6843476)
chr6 (109-321)||(7542440-7542662)
chr6 (59-316)||(30445565-30445831)
chr6 (77-316)||(17904376-17904627)
chr6 (89-316)||(20526856-20527081)
chr6 (47-316)||(22857949-22858218)
chr6 (47-226)||(19696579-19696759)
chr6 (149-321)||(19701961-19702138)
chr6 (149-316)||(22351951-22352122)
chr6 (146-226)||(5165911-5165989)
chr6 (105-301)||(3027908-3028104)
chr6 (105-232)||(12186126-12186253)
chr6 (149-300)||(17694950-17695105)
chr6 (150-296)||(12166246-12166397)
chr6 (47-316)||(16455421-16455691)
chr6 (177-316)||(30443347-30443484)
chr6 (120-232)||(25078626-25078738)
chr6 (47-232)||(12937190-12937374)
chr6 (86-232)||(15719776-15719921)
chr6 (122-232)||(26945277-26945388)
chr6 (128-321)||(24542750-24542948)
chr6 (148-243)||(7293926-7294021)
chr6 (149-316)||(13467563-13467733)
chr6 (86-232)||(31248752-31248894)
chr6 (172-232)||(1069840-1069899)
chr6 (172-232)||(2629006-2629065)
chr6 (120-232)||(11138441-11138555)
chr6 (173-232)||(3233852-3233910)
chr6 (86-232)||(12911482-12911627)
chr6 (153-232)||(13878729-13878806)
chr6 (153-232)||(13883477-13883554)
chr6 (153-232)||(16785921-16785998)
chr6 (153-232)||(26887327-26887404)
chr6 (122-226)||(28037800-28037905)
chr6 (153-232)||(35201429-35201506)
chr6 (148-226)||(11262596-11262672)
chr6 (197-300)||(17035983-17036092)
chr6 (245-318)||(3833313-3833385)
chr6 (172-232)||(26932682-26932742)
chr6 (172-232)||(4816352-4816411)
chr6 (172-232)||(13039888-13039947)
chr6 (172-232)||(13057328-13057387)
chr6 (172-232)||(15530243-15530302)
chr6 (172-232)||(15532802-15532861)
chr6 (172-232)||(19227529-19227588)
chr6 (172-232)||(25477408-25477467)
chr6 (197-232)||(3577659-3577694)
chr6 (173-232)||(22490774-22490832)
chr6 (197-227)||(25941651-25941681)
chr6 (172-232)||(5273336-5273396)
chr6 (172-232)||(19704689-19704749)
chr6 (172-232)||(33308991-33309051)
chr6 (172-232)||(33311260-33311320)
chr6 (149-185)||(3577588-3577624)
chr6 (172-232)||(3629985-3630044)
chr6 (172-232)||(3632059-3632118)
chr6 (172-232)||(9020060-9020119)
chr6 (172-232)||(15541261-15541320)
chr6 (149-185)||(25465998-25466034)
chr6 (172-232)||(32280130-32280189)
[»] chr5 (71 HSPs)
chr5 (106-380)||(13295679-13295963)
chr5 (144-316)||(29748362-29748534)
chr5 (86-316)||(17413202-17413431)
chr5 (87-316)||(2144599-2144830)
chr5 (142-316)||(15224860-15225037)
chr5 (163-295)||(34033681-34033813)
chr5 (146-316)||(31782553-31782728)
chr5 (149-316)||(16093390-16093561)
chr5 (123-232)||(32520536-32520645)
chr5 (105-226)||(15143570-15143691)
chr5 (146-316)||(10627274-10627450)
chr5 (47-226)||(4897833-4898013)
chr5 (47-191)||(15445263-15445408)
chr5 (148-312)||(4754173-4754335)
chr5 (45-221)||(35430288-35430466)
chr5 (122-222)||(36208684-36208785)
chr5 (150-316)||(26406573-26406743)
chr5 (149-300)||(22672762-22672917)
chr5 (166-321)||(25838014-25838174)
chr5 (172-232)||(695976-696035)
chr5 (245-321)||(13294690-13294766)
chr5 (172-232)||(16092321-16092380)
chr5 (172-232)||(20505962-20506021)
chr5 (171-227)||(42770870-42770925)
chr5 (153-232)||(2298104-2298181)
chr5 (149-243)||(28786394-28786487)
chr5 (149-227)||(11962532-11962608)
chr5 (149-300)||(17841348-17841504)
chr5 (153-300)||(35385555-35385706)
chr5 (245-321)||(5777797-5777874)
chr5 (122-218)||(34477123-34477219)
chr5 (122-218)||(34479488-34479584)
chr5 (172-232)||(6661307-6661366)
chr5 (172-232)||(6756593-6756652)
chr5 (172-232)||(20043149-20043208)
chr5 (172-308)||(24126875-24127014)
chr5 (152-243)||(25452485-25452575)
chr5 (172-232)||(31472734-31472793)
chr5 (153-232)||(1170813-1170890)
chr5 (152-227)||(25445503-25445576)
chr5 (172-227)||(31466099-31466153)
chr5 (149-316)||(1240340-1240511)
chr5 (171-232)||(38960250-38960311)
chr5 (172-277)||(9020273-9020376)
chr5 (172-232)||(1189730-1189789)
chr5 (172-232)||(2954516-2954575)
chr5 (172-232)||(6745167-6745226)
chr5 (172-232)||(6747404-6747463)
chr5 (172-232)||(10529220-10529279)
chr5 (172-232)||(18511333-18511392)
chr5 (172-308)||(20045029-20045168)
chr5 (172-232)||(39398114-39398173)
chr5 (172-232)||(39798146-39798205)
chr5 (197-232)||(2724001-2724036)
chr5 (173-232)||(18509440-18509498)
chr5 (172-226)||(18596750-18596803)
chr5 (105-232)||(40221621-40221747)
chr5 (172-232)||(10749799-10749859)
chr5 (172-232)||(15354694-15354754)
chr5 (172-232)||(15356970-15357030)
chr5 (172-232)||(23665143-23665203)
chr5 (172-232)||(23793384-23793444)
chr5 (172-232)||(31179491-31179551)
chr5 (172-232)||(31542834-31542894)
chr5 (172-232)||(31545179-31545239)
chr5 (172-232)||(10586931-10586990)
chr5 (172-232)||(25804124-25804183)
chr5 (172-232)||(27912635-27912694)
chr5 (172-232)||(34530787-34530846)
chr5 (172-232)||(39854582-39854641)
chr5 (149-185)||(42238307-42238343)
[»] chr2 (63 HSPs)
chr2 (21-321)||(10942479-10942793)
chr2 (21-321)||(10948348-10948662)
chr2 (85-319)||(30720646-30720891)
chr2 (122-368)||(43482926-43483185)
chr2 (100-321)||(26345580-26345811)
chr2 (99-227)||(41303082-41303209)
chr2 (146-232)||(28458924-28459009)
chr2 (101-316)||(43139366-43139579)
chr2 (148-316)||(35107286-35107452)
chr2 (101-232)||(40699448-40699579)
chr2 (142-243)||(17921761-17921862)
chr2 (123-331)||(27247974-27248196)
chr2 (122-232)||(15693977-15694089)
chr2 (86-211)||(13828378-13828503)
chr2 (142-226)||(20589771-20589854)
chr2 (172-316)||(11578230-11578373)
chr2 (244-375)||(41304585-41304724)
chr2 (149-300)||(17932562-17932717)
chr2 (122-277)||(27136195-27136350)
chr2 (86-232)||(39680047-39680189)
chr2 (173-296)||(7502918-7503052)
chr2 (148-232)||(34575207-34575290)
chr2 (85-277)||(18800348-18800537)
chr2 (149-232)||(20054864-20054945)
chr2 (172-316)||(20146730-20146874)
chr2 (149-243)||(27517738-27517831)
chr2 (149-316)||(17943449-17943620)
chr2 (153-300)||(30478922-30479073)
chr2 (149-316)||(37170851-37171022)
chr2 (258-316)||(39287198-39287256)
chr2 (86-232)||(39686985-39687127)
chr2 (153-226)||(45158316-45158389)
chr2 (172-232)||(15539596-15539655)
chr2 (142-218)||(30261863-30261939)
chr2 (148-316)||(35028566-35028732)
chr2 (153-232)||(2736207-2736284)
chr2 (153-232)||(2740943-2741020)
chr2 (153-232)||(17462438-17462515)
chr2 (153-232)||(45567411-45567488)
chr2 (197-316)||(12781366-12781491)
chr2 (197-300)||(22712661-22712770)
chr2 (142-232)||(28196712-28196800)
chr2 (105-300)||(33603922-33604122)
chr2 (89-186)||(41304487-41304583)
chr2 (77-232)||(6258843-6258995)
chr2 (176-232)||(17848519-17848574)
chr2 (172-232)||(17849192-17849251)
chr2 (172-232)||(19502132-19502191)
chr2 (197-277)||(27583484-27583563)
chr2 (172-232)||(34979700-34979759)
chr2 (172-232)||(42452856-42452915)
chr2 (270-321)||(7502866-7502917)
chr2 (172-227)||(13910165-13910219)
chr2 (197-232)||(22717370-22717405)
chr2 (172-227)||(22874210-22874264)
chr2 (198-243)||(33674551-33674597)
chr2 (172-232)||(35218083-35218143)
chr2 (172-232)||(36558984-36559044)
chr2 (172-232)||(36561261-36561321)
chr2 (172-232)||(45332301-45332361)
chr2 (172-232)||(40032179-40032238)
chr2 (172-232)||(42064590-42064649)
chr2 (172-232)||(42923630-42923689)
[»] chr3 (90 HSPs)
chr3 (46-316)||(27420645-27420915)
chr3 (86-312)||(36871335-36871561)
chr3 (67-227)||(23941845-23942007)
chr3 (86-321)||(13893368-13893609)
chr3 (53-316)||(7768564-7768828)
chr3 (122-316)||(23633450-23633642)
chr3 (86-300)||(25635391-25635605)
chr3 (172-316)||(23637017-23637161)
chr3 (47-218)||(46966645-46966816)
chr3 (49-232)||(11066670-11066850)
chr3 (86-263)||(1620495-1620670)
chr3 (149-316)||(29914052-29914223)
chr3 (122-232)||(14634510-14634621)
chr3 (171-316)||(1673966-1674111)
chr3 (122-322)||(13419869-13420069)
chr3 (149-316)||(47882981-47883152)
chr3 (172-232)||(13420305-13420364)
chr3 (122-227)||(26763045-26763154)
chr3 (172-308)||(31151347-31151483)
chr3 (149-227)||(27762085-27762161)
chr3 (172-308)||(28761548-28761686)
chr3 (149-300)||(47878270-47878425)
chr3 (149-300)||(54193153-54193309)
chr3 (149-324)||(10595133-10595312)
chr3 (149-300)||(10896933-10897088)
chr3 (77-213)||(27703195-27703331)
chr3 (172-232)||(561896-561955)
chr3 (149-232)||(4535616-4535697)
chr3 (172-232)||(6561889-6561948)
chr3 (122-222)||(11073033-11073132)
chr3 (122-227)||(17795342-17795447)
chr3 (172-232)||(18162742-18162801)
chr3 (122-227)||(19103782-19103887)
chr3 (204-316)||(31021295-31021407)
chr3 (172-232)||(38890119-38890178)
chr3 (172-232)||(39715548-39715607)
chr3 (77-232)||(7418066-7418218)
chr3 (153-232)||(10094177-10094254)
chr3 (153-232)||(10201057-10201134)
chr3 (204-308)||(24177278-24177383)
chr3 (172-227)||(24979791-24979845)
chr3 (153-232)||(27544275-27544352)
chr3 (149-232)||(38002871-38002952)
chr3 (172-227)||(53915615-53915669)
chr3 (149-243)||(54188499-54188592)
chr3 (149-227)||(10949359-10949435)
chr3 (172-222)||(11007634-11007683)
chr3 (154-321)||(16996782-16996953)
chr3 (172-232)||(38210449-38210509)
chr3 (142-195)||(42297754-42297807)
chr3 (172-232)||(1313488-1313547)
chr3 (172-232)||(3859607-3859666)
chr3 (172-232)||(4308400-4308459)
chr3 (172-232)||(4666593-4666652)
chr3 (172-232)||(5926883-5926942)
chr3 (172-232)||(9604726-9604785)
chr3 (172-232)||(12268083-12268142)
chr3 (172-232)||(28181101-28181160)
chr3 (172-232)||(43423582-43423641)
chr3 (172-232)||(45883018-45883077)
chr3 (172-232)||(53917783-53917842)
chr3 (173-232)||(1626803-1626861)
chr3 (149-300)||(5858474-5858627)
chr3 (197-232)||(6303312-6303347)
chr3 (197-232)||(10100236-10100271)
chr3 (172-227)||(10956146-10956200)
chr3 (197-232)||(16462205-16462240)
chr3 (197-243)||(20031463-20031510)
chr3 (197-232)||(22626129-22626164)
chr3 (284-376)||(23941671-23941772)
chr3 (172-227)||(28102121-28102175)
chr3 (101-232)||(36011906-36012035)
chr3 (172-232)||(455986-456046)
chr3 (172-232)||(458363-458423)
chr3 (172-232)||(746836-746896)
chr3 (172-232)||(6063564-6063624)
chr3 (172-232)||(6065914-6065974)
chr3 (172-232)||(10621648-10621708)
chr3 (335-376)||(15771343-15771384)
chr3 (128-180)||(15823725-15823778)
chr3 (172-232)||(25388984-25389044)
chr3 (172-232)||(28413150-28413210)
chr3 (172-232)||(35777500-35777560)
chr3 (172-232)||(3306840-3306899)
chr3 (172-232)||(5886278-5886337)
chr3 (172-232)||(25533521-25533580)
chr3 (172-232)||(27101300-27101359)
chr3 (338-378)||(27703470-27703510)
chr3 (172-232)||(47149014-47149073)
chr3 (172-232)||(51727126-51727185)
[»] chr7 (76 HSPs)
chr7 (92-316)||(6048895-6049120)
chr7 (47-301)||(26210581-26210836)
chr7 (144-232)||(16297118-16297205)
chr7 (47-300)||(13290470-13290723)
chr7 (144-316)||(11081532-11081702)
chr7 (155-272)||(12310119-12310236)
chr7 (125-376)||(8260435-8260693)
chr7 (172-309)||(11084408-11084543)
chr7 (49-243)||(2990627-2990822)
chr7 (173-316)||(7188563-7188706)
chr7 (45-316)||(6067193-6067471)
chr7 (142-232)||(40281469-40281558)
chr7 (149-316)||(25410042-25410213)
chr7 (149-316)||(30246882-30247053)
chr7 (172-227)||(24817475-24817529)
chr7 (149-321)||(44143965-44144141)
chr7 (105-232)||(6332328-6332455)
chr7 (149-316)||(25351265-25351436)
chr7 (149-316)||(25356959-25357130)
chr7 (122-189)||(6046644-6046712)
chr7 (172-232)||(9680929-9680988)
chr7 (172-232)||(25276250-25276309)
chr7 (149-232)||(2120901-2120982)
chr7 (149-348)||(42006541-42006746)
chr7 (149-243)||(44512624-44512717)
chr7 (172-232)||(4296055-4296114)
chr7 (172-232)||(11355367-11355426)
chr7 (172-232)||(20091666-20091725)
chr7 (172-232)||(22828754-22828813)
chr7 (172-232)||(24258572-24258631)
chr7 (172-232)||(27832754-27832813)
chr7 (172-308)||(39146108-39146247)
chr7 (153-232)||(3320153-3320230)
chr7 (153-232)||(3324901-3324978)
chr7 (153-232)||(7069782-7069859)
chr7 (153-232)||(7074789-7074866)
chr7 (172-227)||(24465651-24465705)
chr7 (153-232)||(25405395-25405472)
chr7 (172-232)||(42331118-42331179)
chr7 (149-316)||(21369553-21369725)
chr7 (86-232)||(21680136-21680280)
chr7 (197-300)||(22392502-22392605)
chr7 (197-300)||(34547008-34547117)
chr7 (172-275)||(42223223-42223326)
chr7 (205-316)||(44016814-44016932)
chr7 (172-232)||(7349393-7349453)
chr7 (172-232)||(9027313-9027373)
chr7 (172-301)||(21678102-21678234)
chr7 (172-232)||(22108176-22108236)
chr7 (172-225)||(22251671-22251723)
chr7 (172-314)||(24813620-24813761)
chr7 (172-232)||(40549936-40549996)
chr7 (172-232)||(443704-443763)
chr7 (172-232)||(3878686-3878745)
chr7 (172-232)||(7470143-7470202)
chr7 (172-232)||(9679168-9679227)
chr7 (172-232)||(40836863-40836922)
chr7 (172-227)||(7092333-7092387)
chr7 (197-232)||(15541140-15541175)
chr7 (47-117)||(6349024-6349093)
chr7 (172-232)||(1606489-1606549)
chr7 (172-232)||(2935377-2935437)
chr7 (172-232)||(7351772-7351832)
chr7 (284-321)||(12310263-12310300)
chr7 (172-232)||(22137187-22137247)
chr7 (172-232)||(40552214-40552274)
chr7 (248-316)||(44010952-44011021)
chr7 (172-232)||(13099597-13099656)
chr7 (172-232)||(18345650-18345709)
chr7 (172-232)||(20137230-20137289)
chr7 (176-232)||(20297471-20297526)
chr7 (172-232)||(21990259-21990318)
chr7 (172-232)||(24748703-24748762)
chr7 (172-232)||(26804681-26804740)
chr7 (172-232)||(28487662-28487721)
chr7 (172-232)||(37412248-37412307)
[»] chr1 (74 HSPs)
chr1 (86-321)||(14352965-14353208)
chr1 (90-243)||(13785311-13785464)
chr1 (86-226)||(13125495-13125635)
chr1 (47-316)||(28279280-28279551)
chr1 (122-316)||(27916510-27916705)
chr1 (86-232)||(26613277-26613423)
chr1 (105-232)||(155805-155931)
chr1 (99-316)||(46783055-46783278)
chr1 (47-232)||(16561565-16561751)
chr1 (149-316)||(4144782-4144953)
chr1 (149-350)||(2393381-2393588)
chr1 (172-277)||(15669517-15669620)
chr1 (142-316)||(49959052-49959236)
chr1 (142-232)||(30738724-30738813)
chr1 (172-322)||(18800696-18800846)
chr1 (143-315)||(37990682-37990864)
chr1 (99-232)||(43104258-43104392)
chr1 (150-316)||(14996952-14997122)
chr1 (149-316)||(21353445-21353616)
chr1 (172-232)||(38925601-38925660)
chr1 (149-243)||(2401320-2401413)
chr1 (172-316)||(8347396-8347540)
chr1 (149-243)||(25134061-25134154)
chr1 (172-227)||(42922334-42922388)
chr1 (105-318)||(8213582-8213806)
chr1 (153-300)||(9526394-9526545)
chr1 (171-232)||(14098092-14098152)
chr1 (172-232)||(6115226-6115285)
chr1 (172-232)||(16428752-16428811)
chr1 (172-232)||(17324759-17324818)
chr1 (172-232)||(20291556-20291615)
chr1 (172-232)||(31422996-31423055)
chr1 (172-232)||(39462618-39462677)
chr1 (172-232)||(50248695-50248754)
chr1 (153-232)||(2232599-2232676)
chr1 (149-316)||(3091205-3091377)
chr1 (142-232)||(15294928-15295016)
chr1 (171-308)||(9241208-9241348)
chr1 (172-232)||(9459539-9459599)
chr1 (172-232)||(9463366-9463426)
chr1 (172-277)||(14183715-14183818)
chr1 (171-224)||(17186250-17186302)
chr1 (340-385)||(20566954-20566999)
chr1 (172-232)||(2510447-2510506)
chr1 (172-232)||(10399951-10400010)
chr1 (172-232)||(12302628-12302687)
chr1 (172-232)||(13215180-13215239)
chr1 (172-232)||(18307208-18307267)
chr1 (172-232)||(18839686-18839745)
chr1 (172-232)||(25127971-25128030)
chr1 (172-232)||(25251398-25251457)
chr1 (172-232)||(39932172-39932231)
chr1 (172-232)||(41647019-41647078)
chr1 (172-232)||(47906369-47906428)
chr1 (172-232)||(50076795-50076854)
chr1 (172-232)||(50078944-50079003)
chr1 (172-232)||(50307669-50307728)
chr1 (172-232)||(51757630-51757689)
chr1 (258-321)||(13785490-13785553)
chr1 (173-232)||(26332613-26332671)
chr1 (172-232)||(16226266-16226326)
chr1 (172-232)||(16231662-16231722)
chr1 (172-232)||(23785938-23785998)
chr1 (172-225)||(40134050-40134102)
chr1 (172-232)||(47179812-47179872)
chr1 (172-232)||(6995823-6995882)
chr1 (172-232)||(16429056-16429115)
chr1 (172-224)||(17318994-17319045)
chr1 (172-232)||(20302558-20302617)
chr1 (172-232)||(28842594-28842653)
chr1 (172-232)||(28998376-28998435)
chr1 (172-232)||(29004092-29004151)
chr1 (122-191)||(30790473-30790544)
chr1 (172-232)||(31490012-31490071)
[»] chr8 (46 HSPs)
chr8 (86-380)||(33838958-33839273)
chr8 (91-243)||(13985121-13985271)
chr8 (122-322)||(31573796-31573996)
chr8 (86-232)||(31035272-31035417)
chr8 (86-222)||(31578313-31578449)
chr8 (47-222)||(6376153-6376328)
chr8 (131-232)||(13985893-13985993)
chr8 (148-232)||(17847680-17847763)
chr8 (149-351)||(23179660-23179869)
chr8 (150-316)||(30423123-30423295)
chr8 (172-316)||(27911081-27911228)
chr8 (172-316)||(27957500-27957647)
chr8 (47-277)||(31162320-31162551)
chr8 (149-316)||(33032566-33032737)
chr8 (47-275)||(3895932-3896162)
chr8 (172-308)||(14477351-14477490)
chr8 (172-232)||(30480624-30480683)
chr8 (149-232)||(9021206-9021287)
chr8 (149-316)||(3276256-3276427)
chr8 (150-232)||(15949536-15949617)
chr8 (85-232)||(16752559-16752702)
chr8 (146-316)||(2267119-2267294)
chr8 (99-227)||(11701013-11701132)
chr8 (86-232)||(28327910-28328052)
chr8 (172-232)||(27107018-27107077)
chr8 (152-232)||(28895504-28895582)
chr8 (215-316)||(31035136-31035238)
chr8 (172-232)||(41384899-41384958)
chr8 (153-243)||(590784-590873)
chr8 (153-232)||(16757370-16757447)
chr8 (197-300)||(29554930-29555039)
chr8 (171-232)||(1225321-1225381)
chr8 (142-195)||(33020995-33021048)
chr8 (172-232)||(3005753-3005812)
chr8 (172-232)||(4424173-4424232)
chr8 (172-232)||(14419312-14419371)
chr8 (172-232)||(15809373-15809432)
chr8 (172-277)||(25952629-25952734)
chr8 (149-185)||(26268331-26268367)
chr8 (172-232)||(32339464-32339523)
chr8 (197-232)||(17799569-17799604)
chr8 (172-226)||(15956118-15956171)
chr8 (172-232)||(43079757-43079817)
chr8 (172-232)||(15072865-15072925)
chr8 (172-232)||(28283340-28283399)
chr8 (172-232)||(33541509-33541568)
[»] chr4 (82 HSPs)
chr4 (86-316)||(9022372-9022603)
chr4 (86-301)||(9863791-9864007)
chr4 (86-232)||(54906740-54906887)
chr4 (142-316)||(38208774-38208948)
chr4 (86-226)||(16185871-16186010)
chr4 (47-316)||(28453752-28454020)
chr4 (53-316)||(10112937-10113201)
chr4 (87-232)||(3982213-3982359)
chr4 (172-316)||(19322761-19322905)
chr4 (99-227)||(3760106-3760234)
chr4 (101-227)||(40999000-40999126)
chr4 (47-232)||(31983524-31983709)
chr4 (172-300)||(18534954-18535082)
chr4 (85-232)||(38890260-38890406)
chr4 (146-316)||(16638738-16638913)
chr4 (45-226)||(5336775-5336956)
chr4 (142-226)||(47150986-47151069)
chr4 (149-321)||(36769385-36769562)
chr4 (149-316)||(4558222-4558394)
chr4 (123-188)||(2880972-2881036)
chr4 (144-316)||(5516338-5516521)
chr4 (125-214)||(23001477-23001566)
chr4 (86-300)||(18537510-18537724)
chr4 (151-300)||(25699677-25699830)
chr4 (145-232)||(4874573-4874659)
chr4 (149-321)||(15312223-15312399)
chr4 (149-243)||(16489339-16489432)
chr4 (149-300)||(4556158-4556313)
chr4 (149-316)||(4570006-4570177)
chr4 (149-316)||(31300336-31300507)
chr4 (149-316)||(36771307-36771479)
chr4 (77-232)||(55822267-55822418)
chr4 (86-232)||(12102239-12102385)
chr4 (172-232)||(2891444-2891503)
chr4 (172-232)||(6133025-6133084)
chr4 (172-232)||(13547307-13547366)
chr4 (172-232)||(24879142-24879201)
chr4 (172-232)||(24880604-24880663)
chr4 (86-300)||(26557666-26557882)
chr4 (149-232)||(7050356-7050437)
chr4 (149-316)||(47566404-47566576)
chr4 (245-316)||(54906641-54906712)
chr4 (171-316)||(8756372-8756518)
chr4 (35-243)||(15316948-15317154)
chr4 (172-232)||(12395966-12396025)
chr4 (172-232)||(16455394-16455453)
chr4 (172-232)||(19096036-19096095)
chr4 (172-232)||(40637227-40637286)
chr4 (172-232)||(48486472-48486531)
chr4 (149-243)||(4884864-4884957)
chr4 (153-243)||(8529257-8529346)
chr4 (153-232)||(11853551-11853628)
chr4 (149-321)||(13072080-13072256)
chr4 (149-243)||(16689039-16689132)
chr4 (152-300)||(18586894-18587046)
chr4 (122-227)||(25357794-25357904)
chr4 (197-300)||(15831069-15831178)
chr4 (172-232)||(9174266-9174326)
chr4 (172-232)||(9176594-9176654)
chr4 (172-232)||(16931909-16931969)
chr4 (172-232)||(16934263-16934323)
chr4 (122-277)||(41997599-41997755)
chr4 (172-232)||(12400928-12400987)
chr4 (172-232)||(13544112-13544171)
chr4 (172-232)||(14787552-14787611)
chr4 (172-232)||(18709284-18709343)
chr4 (142-226)||(22295316-22295399)
chr4 (172-232)||(24888949-24889008)
chr4 (172-232)||(26086097-26086156)
chr4 (172-232)||(36380502-36380561)
chr4 (172-232)||(47868554-47868613)
chr4 (172-232)||(56030597-56030656)
chr4 (267-318)||(3760040-3760091)
chr4 (284-321)||(23001618-23001655)
chr4 (172-232)||(44599958-44600018)
chr4 (172-232)||(14633472-14633530)
chr4 (172-232)||(16453462-16453521)
chr4 (172-232)||(17662366-17662425)
chr4 (172-232)||(22800983-22801042)
chr4 (172-232)||(33415609-33415668)
chr4 (172-232)||(37313187-37313246)
chr4 (172-232)||(38928298-38928357)
[»] scaffold0008 (1 HSPs)
scaffold0008 (86-243)||(57464-57622)
[»] scaffold0057 (1 HSPs)
scaffold0057 (172-301)||(16772-16901)
[»] scaffold0474 (1 HSPs)
scaffold0474 (122-243)||(10694-10818)
[»] scaffold0256 (1 HSPs)
scaffold0256 (197-316)||(16237-16362)
[»] scaffold0004 (1 HSPs)
scaffold0004 (149-300)||(188341-188496)
[»] scaffold0224 (1 HSPs)
scaffold0224 (172-227)||(15943-15997)
[»] scaffold0468 (1 HSPs)
scaffold0468 (172-232)||(1764-1823)
[»] scaffold0154 (1 HSPs)
scaffold0154 (172-232)||(11594-11653)
[»] scaffold0131 (2 HSPs)
scaffold0131 (173-232)||(15127-15185)
scaffold0131 (172-232)||(14503-14562)
[»] scaffold0006 (1 HSPs)
scaffold0006 (153-232)||(224821-224898)
[»] scaffold0209 (1 HSPs)
scaffold0209 (153-227)||(17089-17161)
[»] scaffold0025 (1 HSPs)
scaffold0025 (172-232)||(69412-69471)
[»] scaffold0005 (2 HSPs)
scaffold0005 (172-232)||(52119-52178)
scaffold0005 (172-232)||(183762-183820)
[»] scaffold0472 (1 HSPs)
scaffold0472 (172-232)||(6307-6367)
[»] scaffold0267 (1 HSPs)
scaffold0267 (172-232)||(149-209)
[»] scaffold0140 (2 HSPs)
scaffold0140 (172-232)||(22224-22284)
scaffold0140 (172-232)||(24499-24559)
[»] scaffold0031 (1 HSPs)
scaffold0031 (172-232)||(79293-79352)


Alignment Details
Target: chr6 (Bit Score: 298; Significance: 1e-167; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 23 - 384
Target Start/End: Complemental strand, 6843476 - 6843110
Alignment:
Q  23 agagaggagagaaaagaacattagaatttgtttactcagttcaatccaataccaacctactatgggg--agagagtaactctctgttccactataattta 120  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  6843476 agagaggagagaaaagaacatgagaacttgtttactcagttcaatccaataccgacctactatggggggagagagtaactctctgttccactataattta 6843377  T
Q  121 cgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccg---tgaccaagagact 217  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |   |||||||||||||    
T  6843376 tgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatctcttcctgctgtgaccaagagact 6843277  T
Q  218 caatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaat 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  6843276 caatcctaatggtgtgtgttcaaggtgattcaatcctaaccctagtgtttgttgccaagaaaattctctacaaaccatagttttattgttggcttctaat 6843177  T
Q  318 cctttttctactctttctttcatcttatacaagatctgaatttatagagaaatataaccctcagaat 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6843176 cctttttctactctttctttcatcttatacaggatctgaatttatagagaaatataaccctcagaat 6843110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 321
Target Start/End: Original strand, 7542440 - 7542662
Alignment:
Q  109 cactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtga 207  Q
    |||| ||||||  |||||||||||||||| ||| |||||||||||||| ||| | |||||||| ||||||||| ||||| || | ||| |||||||||||    
T  7542440 cactgtaatttttgagtaactttacaaagagatatcaaagggttacaaaaattagtcttcaaacctaattctatccaaattcccaaatctcttcccgtga 7542539  T
Q  208 ccaagagactcaatcctaatggtgtgtgttcaag----------gttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctag 297  Q
    ||||||||||||||| |||| |||| | | ||||          || ||||||||| ||||||||| ||||||||||||| |||| | |||||||||||     
T  7542540 ccaagagactcaatcataatagtgtttctccaagtgaatcaattgtgattcaatcccaaccctagtgtttgttgccaagagaattctttacaaacccta- 7542638  T
Q  298 ttttattgttggcttctaatcctt 321  Q
    |||||||||||||||||| |||||    
T  7542639 ttttattgttggcttctattcctt 7542662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 316
Target Start/End: Complemental strand, 30445831 - 30445565
Alignment:
Q  59 cagttcaatccaataccaacctactatgg-ggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaa 155  Q
    ||||||| ||||||||  ||||| ||||| |||||||| |  |||| |||||||||||||  | ||||||||||||||| ||  | ||||||||||||||    
T  30445831 cagttcagtccaatactgacctagtatggtggagagagcagttctccgttccactataatg-atgagtaactttacaaaagagatatcaaagggttacaa 30445733  T
Q  156 gaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaag-------agactcaatcctaatggtgtgtgttcaaggttattc 248  Q
    |||| | |||||||| ||||||||||||||||||| | || ||||| | ||||||||       |||    |||||||| |||| | | |||||| | ||    
T  30445732 gaattagtcttcaaacctaattctacccaaagtcttggatctcttcacatgaccaagagagaatagagaatatcctaatagtgtttctccaaggtgaatc 30445633  T
Q  249 aatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||  |||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  30445632 aatctcaaccgtagtgtttgttgccaagagaattatctacaaaccctagttttaatgttggcttctaa 30445565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 77 - 316
Target Start/End: Original strand, 17904376 - 17904627
Alignment:
Q  77 acctactatgggga-gagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaa 175  Q
    |||||||||||||| || |  |||||||  ||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||| | || ||| ||||    
T  17904376 acctactatggggaagataacaactctccattccactataatttt-gagtaactttacaaaagattccaaagggttacaagaatcagtgtttaaacctaa 17904474  T
Q  176 ttctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag------------gttattcaatcctaaccctagt 263  Q
    ||||| ||||| ||   ||| ||||||| ||||||||||| ||| ||||||| |||||||||||||            || ||||||||| |||| ||||    
T  17904475 ttctagccaaaatcctaaatctcttcccatgaccaagagattcagtcctaatagtgtgtgttcaaggtgaaccaaattgtgattcaatcccaaccttagt 17904574  T
Q  264 atttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     |||||||| |||| ||   |||||||||||||||||| ||||||||||||||    
T  17904575 gtttgttgcaaagagaaaactctacaaaccctagttttgttgttggcttctaa 17904627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 316
Target Start/End: Complemental strand, 20527081 - 20526856
Alignment:
Q  89 gagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaag 187  Q
    ||||||| | ||||| |||||||||||||  | || ||||||||||||| ||| ||||| |||||||||||| | |||||||| ||||||||||| ||||    
T  20527081 gagagagcagctctccgttccactataatg-atgaataactttacaaagagatatcaaaaggttacaagaattagtcttcaaacctaattctaccaaaag 20526983  T
Q  188 tctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatcta 287  Q
    |||  ||| |||||  |||||||||||||||||||||||| |||| | | |||||| | ||||||  ||||||||| ||||||| |||||  |   ||||    
T  20526982 tct-taatctcttcttgtgaccaagagactcaatcctaatagtgt-tttccaaggtgaatcaatctcaaccctagtgtttgttgtcaagagcaaactcta 20526885  T
Q  288 caaaccctagttttattgttggcttctaa 316  Q
    ||| ||||||||||  |||||| ||||||    
T  20526884 caacccctagtttttgtgttggtttctaa 20526856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 316
Target Start/End: Original strand, 22857949 - 22858218
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttc- 143  Q
    ||||||||||| ||||||  ||||||||  ||||| | | |||||||||| | |  || |||||||||||| | | ||||||||||||||||  || ||     
T  22857949 aatttgtttacacagttcggtccaatactgacctagtctgggggagagagcagccatccgttccactataa-tgatgagtaactttacaaagatatatca 22858047  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||||||||||||| | |||||||| |||| |||||| |||||||| ||| |||||  ||||||||||||||||||| |||| |||| |   ||||||    
T  22858048 aaagggttacaagaattagtcttcaaacctaaatctacctaaagtctc-aatctcttcttgtgaccaagagactcaatcataatagtgt-ttcccaaggt 22858145  T
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | ||||||  ||||||||| |||||| |||||| ||   ||||||||||||||||||  |||| ||||||||    
T  22858146 gaatcaatctcaaccctagtgtttgttaccaagagaaaattctacaaaccctagtttttgtgttagcttctaa 22858218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 19696759 - 19696579
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggg-gagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttc 143  Q
    ||||||||||| ||||||  ||||||||  ||||| | |||| ||||||| | || ||||||||||||||||  | || |||||||||||| ||  | ||    
T  19696759 aatttgtttacccagttcggtccaatactgacctagtctgggagagagagcagctatctgttccactataatg-atgaataactttacaaaagagatatc 19696661  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    ||||| |||||||||| | |||||||| ||||||||| |||||||||| ||| |||| | ||||| |||||||||||||||||    
T  19696660 aaaggattacaagaataagtcttcaaacctaattctaaccaaagtctc-aatctctttcagtgacaaagagactcaatcctaa 19696579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 321
Target Start/End: Original strand, 19701961 - 19702138
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| ||||||||  ||||||||||||| ||||| |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  19701961 gttacaagaatcagtcttcaaacataattctacccaa-gtctc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 19702058  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
         |||||| ||||||||| ||||||||||||| ||||| |||| |||| |||||||   ||||||||||||| ||||    
T  19702059 caaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacgctagtttgtatgttggcttctaaacctt 19702138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 22351951 - 22352122
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    |||||| |||||| |||||||| ||||||||||||||| |||| |   ||||||||||||||||||||||||||||||| ||| | |||||||||| |||    
T  22351951 gttacatgaatcagtcttcaaacctaattctacccaaa-tctc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgatt 22352048  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  22352049 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 22352122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 5165911 - 5165989
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||    
T  5165911 agggttacaagaatcattcttcaaacctaattctaccc-aagtc-ccaatctcttcccgtgaccaagagactcaatcctaa 5165989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 301
Target Start/End: Original strand, 3027908 - 3028104
Alignment:
Q  105 gttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcc 202  Q
    |||||||||||||  | ||||||||||||||| ||  | |||| ||||||||| ||| ||||| ||   |||||||||| ||||||||| ||| |||||     
T  3027908 gttccactataatg-atgagtaactttacaaaagagatatcaatgggttacaaaaataaatctccagc-ctaattctactcaaagtctc-aatctcttca 3028004  T
Q  203 cgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaattatctacaaaccctagttt 300  Q
    ||||||||||||||||||||||||| |||| |   |||||| | |||| || ||||||||| |||||||||||||  ||| | | |||||||||||||||    
T  3028005 cgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccccaaccctagtgtttgttgccaagagcaaactctatacaaaccctagttt 3028103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 12186126 - 12186253
Alignment:
Q  105 gttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcc 202  Q
    |||||||||||||  | ||||||||||||||| ||  | |||| | ||||||||||| | ||| |||| |||||| ||||||||||||| ||| ||||||    
T  12186126 gttccactataatg-atgagtaactttacaaaagagatatcaatgagttacaagaataagtctccaaacctaattgtacccaaagtctc-aatctcttcc 12186223  T
Q  203 cgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| ||||||||||||||||||| ||||    
T  12186224 cgtgaacaagagactcaatcctaatagtgt 12186253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 17694950 - 17695105
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  17694950 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 17695047  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| ||||||||| ||||||||||||| ||||| |||| ||||||||||||    
T  17695048 caaaacaatcccaaccctagt-tttgttgccaagagaaattctctataaaccctagttt 17695105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 296
Target Start/End: Original strand, 12166246 - 12166397
Alignment:
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt- 247  Q
    |||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||||||| | ||||||| || | |     
T  12166246 ttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatggtgctttgttcaacgtgaatc 12166343  T
Q  248 ----caatcctaaccctagtatttgttgccaaga-aaattatctacaaacccta 296  Q
        |||||| ||||||||| ||||||||||||| ||||| |||| ||||||||    
T  12166344 aaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacccta 12166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 316
Target Start/End: Original strand, 16455421 - 16455691
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataatttacgagtaactttacaaa--ggatttc 143  Q
    ||||||||||||||||||  ||||||||  ||||| ||| |||||||||| | | ||| |||||||||||| | | |||||| ||||||||   ||| ||    
T  16455421 aatttgtttactcagttcggtccaatactgacctagtatgggggagagagcagccctccgttccactataa-tgatgagtaattttacaaaagagatatc 16455519  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||||||||||||| |||| ||    |||||||||||||||||| | ||| |||| |||||| ||||||||| ||||||||  |||| |   ||||||    
T  16455520 aaagggttacaagaataaatc-tcccgcctaattctacccaaagtc-ccaatctctttccgtgagcaagagacttaatcctaacagtgt-ttcccaaggt 16455616  T
Q  244 tattcaatcctaaccctagtatttgttgcca--agaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | |||| |  ||||||||| || |||||||  |||||| | | ||||||||||||||||  ||||| |||||||    
T  16455617 gaatcaaccacaaccctagtgttcgttgccaagagaaaactctgtacaaaccctagtttttgtgttgacttctaa 16455691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 30443484 - 30443347
Alignment:
Q  177 tctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaag 276  Q
    |||||||||||||  |||| ||||||||||||||  |||||  |||||||| |||| | |||||||| | |||||   ||||||||| |||||||||||     
T  30443484 tctacccaaagtcctgaatctcttcccgtgaccagaagact--atcctaatagtgtttcttcaaggtgaatcaatatcaaccctagtgtttgttgccaac 30443387  T
Q  277 aaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | |||| |||||||| | |||||||  |||||||||||||    
T  30443386 agaattctctacaaatcatagttttgatgttggcttctaa 30443347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 25078626 - 25078738
Alignment:
Q  120 acgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagact 217  Q
    ||||||||||||||||| ||  | |||||||||||||||||| | |||||||| ||||||||||  ||| |||| ||| |||| ||||||||||||||||    
T  25078626 acgagtaactttacaaaagagatatcaaagggttacaagaataagtcttcaaacctaattctacttaaa-tctc-aatctctttccgtgaccaagagact 25078723  T
Q  218 caatcctaatggtgt 232  Q
    ||||| ||| |||||    
T  25078724 caatcttaacggtgt 25078738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 12937190 - 12937374
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaa 145  Q
    ||||||||||| | ||||  ||||| ||  ||||| | ||||||||||| | | ||| |||||||||||||  | |||||||||||||||| ||| | ||    
T  12937190 aatttgtttacccggttcgttccaaaacagacctagtctggggagagagcagccctccgttccactataatg-atgagtaactttacaaagagatattaa 12937288  T
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | |||||||||||| |  ||||||| ||||||||||| ||||| || ||| | ||| |||||| ||||||||||||| |||| ||||    
T  12937289 atggttacaagaattagccttcaaacctaattctaccaaaagtttc-aatctattctcgtgactaagagactcaatcttaatagtgt 12937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 15719921 - 15719776
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    ||||| |||| ||||||||||| |||||||||  | ||||||||||||||| ||  | |||| ||||||||||||| | ||| |    ||||||||||||    
T  15719921 ggggaaagagcaactctctgtttcactataatg-atgagtaactttacaaaagagatatcaatgggttacaagaataagtctcccgc-ctaattctaccc 15719824  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||| | ||| ||||||| ||||||||||||||||||||||| ||||    
T  15719823 aaagtccc-aatctcttcccatgaccaagagactcaatcctaatagtgt 15719776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 26945388 - 26945277
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||| | ||||||| ||| | ||| |||| |||||||||||||||||| | ||| ||||||||||||||||||||| |    
T  26945388 gagtaactttacaaaagagatatcaatgagttacaaaaataagtctacaaacctaattctacccaaagtccc-aatctcttcccgtgaccaagagactta 26945290  T
Q  220 atcctaatggtgt 232  Q
    |||||||| ||||    
T  26945289 atcctaatagtgt 26945277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 321
Target Start/End: Original strand, 24542750 - 24542948
Alignment:
Q  128 ctttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||||||| ||| |||||||||||||||||||||| || ||| ||||||||| ||||||||  |||| ||||| ||| |||| ||||||| |||||||    
T  24542750 ctttacaaagagatatcaaagggttacaagaatcaat-tttaaacctaattctatccaaagtcatgaatctcttctcgtaaccatgagactctatcctaa 24542848  T
Q  227 tggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcct 320  Q
      ||| | | |||||||| | |     |||||| ||||||||| ||||||||||||| || | |||| ||||| ||| |||  ||||||||||||| |||    
T  24542849 aagtgttttattcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaatctctataaaccatag-tttggtgttggcttctaaacct 24542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 7294021 - 7293926
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||||||||| | ||||||||  |||||| |||| |||||| |||| ||||  |||||||||||||||| ||| |||| |||| ||||||||||    
T  7294021 ggttacaagaattagtcttcaaaattaattccaccctaagtcttgaatctctttacgtgaccaagagactctatcttaatagtgtttgttcaaggt 7293926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 13467563 - 13467733
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||  ||||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  13467563 gttacaagaatcagtcttcaaacctaattctacc--aagtcac-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 13467659  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  ||||||| |||| ||||| |||| ||||||||||||   |||||||||||||    
T  13467660 caaaacaatcccaaccctagt-gttgttgcaaagataaattctctataaaccctagtttgtatgttggcttctaa 13467733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 31248752 - 31248894
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||||| ||||| | |||||||||||  | ||||  |||||||||| |||   || | ||| ||||||||| |||||||| |||||||||||||    
T  31248752 ggggagagagtagctctccgatccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcagtcttcaaacctaattctaccca 31248848  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  31248849 a-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 31248894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1069840 - 1069899
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||| || ||||||||||||||||||||| ||||    
T  1069840 ctaattctacccaaagtctc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 1069899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2629006 - 2629065
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  2629006 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 2629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 11138555 - 11138441
Alignment:
Q  120 acgagtaactttacaaag-gatttcaaagg--gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagac 216  Q
    |||||||||||||||||| ||| ||||| |  ||||||| ||| | ||||||||  |||||||||| |||||| | | | |||||||||||||||| |||    
T  11138555 acgagtaactttacaaagagatatcaaaagaggttacaataattagtcttcaaacataattctacctaaagtcccca-tctcttcccgtgaccaagtgac 11138457  T
Q  217 tcaatcctaatggtgt 232  Q
    ||||||||||| ||||    
T  11138456 tcaatcctaatagtgt 11138441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 3233852 - 3233910
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  3233852 taattctacccaaagcctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 3233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 12911482 - 12911627
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | | ||| |||||||||||||  | |||||||||||||||| ||| | ||| |||||||||||| |  ||||||| |||| |||||| |    
T  12911482 ggggagagagcagccctccgttccactataatg-atgagtaactttacaaagagatattaaatggttacaagaattagccttcaaacctaactctaccaa 12911580  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||| ||| | ||  |||||| ||||||||||||| |||| ||||    
T  12911581 aagtctc-aatctattatcgtgactaagagactcaatcttaatagtgt 12911627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 13878806 - 13878729
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  13878806 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 13878729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 13883554 - 13883477
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  13883554 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 13883477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 16785998 - 16785921
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  16785998 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 16785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 26887327 - 26887404
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  26887327 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 26887404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 28037800 - 28037905
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||||||||||||||||| |   || ||| |||||||||||||||||||| ||| | || |||||| |||| ||||||    
T  28037800 gagtaactttacaaaagagatatcaaagggttacaagaataagattttaaacctaattctacccaaagtctc-aatctatttccgtgaacaagggactca 28037898  T
Q  220 atcctaa 226  Q
    |||||||    
T  28037899 atcctaa 28037905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 35201429 - 35201506
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  35201429 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 35201506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 11262672 - 11262596
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    ||||| |||||| | |||||||| ||||||||||| ||| |||| ||| |||||| |||||||||||||||||||||||    
T  11262672 ggttataagaattagtcttcaaacctaattctacctaaa-tctc-aatctcttcctgtgaccaagagactcaatcctaa 11262596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 17036092 - 17035983
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||||  |||||||||||| ||||| |||| |    
T  17036092 tcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagagaaattctctata 17035994  T
Q  290 aaccctagttt 300  Q
    |||||||||||    
T  17035993 aaccctagttt 17035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 3833385 - 3833313
Alignment:
Q  245 attcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatc 318  Q
    ||||||||| ||||||| | |||||||| |||| |||| | ||||||| |||||||| ||||||||||||||||    
T  3833385 attcaatcccaaccctaatgtttgttgc-aagagaattctttacaaactctagttttcttgttggcttctaatc 3833313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 26932682 - 26932742
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  26932682 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 26932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4816352 - 4816411
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  4816352 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 4816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13039947 - 13039888
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| ||||||||| ||| ||||||||| ||||||||||| ||||||||| ||||    
T  13039947 ctaattctacgcaaagtctc-aatctcttcccgtaaccaagagacttaatcctaatagtgt 13039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13057387 - 13057328
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||| ||||    
T  13057387 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagacttaatcctaatagtgt 13057328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15530243 - 15530302
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||| |||||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  15530243 ctaattcaacccaaagcctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 15530302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15532802 - 15532861
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||| ||||||||||||||||||||||| ||||    
T  15532802 ctaattctaccaaaagtccc-aatctcttcccatgaccaagagactcaatcctaatagtgt 15532861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 19227529 - 19227588
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  19227529 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 19227588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25477467 - 25477408
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| |||| |||||||||||||||||||||||||| ||||    
T  25477467 ctaattctacccaaagcccc-aatctctttccgtgaccaagagactcaatcctaatagtgt 25477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 3577659 - 3577694
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3577659 tcttcccgtgaccaagagactcaatcctaatagtgt 3577694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 22490832 - 22490774
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| | ||| |||| |||| ||||||||||||||||||||| ||||    
T  22490832 taattctacccaaagtccc-aatctctttccgtaaccaagagactcaatcctaatagtgt 22490774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 25941681 - 25941651
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||||||||||||||    
T  25941681 tcttcccgtgaccaagagactcaatcctaat 25941651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5273336 - 5273396
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  5273336 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 5273396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 19704689 - 19704749
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  19704689 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 19704749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 33309051 - 33308991
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  33309051 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 33308991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 33311320 - 33311260
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  33311320 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 33311260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 3577588 - 3577624
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  3577588 gttacaagaatcagtcttcaaacctaattctacccaa 3577624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 3629985 - 3630044
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||| ||||||||||| ||||    
T  3629985 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagattcaatcctaatagtgt 3630044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 3632059 - 3632118
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| |||| |||| || |||||||||||||||||| ||||    
T  3632059 ctaattctacccaaagtccc-aatctctttccgtaacaaagagactcaatcctaatagtgt 3632118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 9020119 - 9020060
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||  | ||||||||||||||||||||| ||||    
T  9020119 ctaattctacccaaagtccc-aatctcttcctataaccaagagactcaatcctaatagtgt 9020060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15541261 - 15541320
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| |||||||||||| | ||| ||||| ||||||||||||||||||| ||||| ||||    
T  15541261 ctaatcctacccaaagtccc-aatctcttctcgtgaccaagagactcaattctaatagtgt 15541320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 25465998 - 25466034
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  25465998 gttacaagaatcagtcttcaaacctaattctacccaa 25466034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 32280189 - 32280130
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||  ||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  32280189 ctaattctacctgaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 32280130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 106 - 380
Target Start/End: Complemental strand, 13295963 - 13295679
Alignment:
Q  106 ttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgt 205  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||  ||    
T  13295963 ttccactataatttttgagtaactttacaaaagatttcaaagggttacaagaatcagtcttcaaacttaattctacccaaagtctcgaatctcttcatgt 13295864  T
Q  206 gaccaagagactcaatcctaatggtg-tgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttatt 304  Q
    || ||||||||||||||||||  ||| | |||||| ||| ||| ||||| ||| ||||| ||||||||||| | |||| | |||||||||||||||| ||    
T  13295863 gatcaagagactcaatcctaaaagtgttttgttcatggtgattgaatcccaactctagtgtttgttgccaaaagaattctatacaaaccctagttttgtt 13295764  T
Q  305 gttggcttctaatcc---tttttctactcttt------ctttcatcttatacaagatctgaatttatagagaaatataaccctca 380  Q
    |||||||| ||||||   ||||||||||||||       |||||||| ||| | ||| || ||||||||||||||| ||||||||    
T  13295763 gttggcttttaatccatgtttttctactctttacactcttttcatctgatataggatttgtatttatagagaaataaaaccctca 13295679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 29748534 - 29748362
Alignment:
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||| ||||||||||| | ||||||||| || |||||||||||||| ||||| | ||||||||||||||||||||||||||| | |||| | | ||||      
T  29748534 aaagagttacaagaattagtcttcaaatttagttctacccaaagtcccgaatctattcccgtgaccaagagactcaatcctattagtgtttctccaagac 29748435  T
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | ||||||||||||||| | ||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  29748434 gaatcaatcctaaccctactgtttgttgccaagagaattctctacaaaccctagttttcttgttggcttctaa 29748362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 86 - 316
Target Start/End: Original strand, 17413202 - 17413431
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | | |||||||||||||||||  | ||||||||||||||| ||  | |||||||||||||||||| | | |||||| |||||||||||     
T  17413202 ggggagagagcatccctctgttccactataatg-atgagtaactttacaaaagagatatcaaagggttacaagaataagttttcaaacctaattctacct 17413300  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaatta 283  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||| |||| |   |||||| | ||||||| ||||||||| |||||||||||||  |       
T  17413301 aaagtctc-aatctcttcccttgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaatcccaaccctagtgtttgttgccaagagcaaac 17413398  T
Q  284 tctacaaaccctagttttattgttggcttctaa 316  Q
    |||||||||| |||||||| || || |||||||    
T  17413399 tctacaaaccatagttttagtgctgccttctaa 17413431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 87 - 316
Target Start/End: Original strand, 2144599 - 2144830
Alignment:
Q  87 gggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaag-ggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    ||||||||| | | ||| |||||||||||||  | |||||||||||||||| ||| | |||  |||||||||||| | |||||||| ||||||| |||||    
T  2144599 gggagagagcagccctccgttccactataatg-atgagtaactttacaaagagatataaaaaaggttacaagaattagtcttcaaacctaattccaccca 2144697  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtat-ttgttgccaagaaaatta 283  Q
    |||||  |||| |||||||| ||||||||||||| |||||||| |||| | | |||||| | ||||||| ||||||||| | ||||||||||||  |       
T  2144698 aagtcctgaatctcttcccgcgaccaagagactccatcctaatagtgtttctccaaggtgaatcaatcccaaccctagtgtgttgttgccaagagcaaac 2144797  T
Q  284 tctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||||||||||||||| |||||||||||||    
T  2144798 tctacaaaccctagttttagtgttggcttctaa 2144830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 316
Target Start/End: Original strand, 15224860 - 15225037
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag 241  Q
    ||||| |||||||| ||| | |||||||| |||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||| |||| | ||||||    
T  15224860 tcaaatggttacaaaaattagtcttcaaacctaattttacccaaagtctcgaatctcttcccatgaccaaaagactttatcctaatagtgtttcttcaag 15224959  T
Q  242 gttattcaatcctaaccctagtatttgttgccaagaaaattatctacaa---accctagttttattgttggcttctaa 316  Q
    || | |||||| |||||||||| ||||||||||||| | || |||||||   |||||||||||  |||||||||||||    
T  15224960 gtgaatcaatcataaccctagtgtttgttgccaagagagttctctacaagccaccctagttttgatgttggcttctaa 15225037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 34033681 - 34033813
Alignment:
Q  163 tcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctag 262  Q
    ||||||||  |||||||||||||| ||  |||| |||||||| |||||||||||||||||||||| |||| | | |||||| | ||||||| ||| ||||    
T  34033681 tcttcaaacttaattctacccaaaatcctgaatctcttcccgcgaccaagagactcaatcctaatagtgtttctccaaggtaaatcaatcccaacgctag 34033780  T
Q  263 tatttgttgccaagaaaattatctacaaaccct 295  Q
    | ||||||||||||| |||||||||||||||||    
T  34033781 tgtttgttgccaagagaattatctacaaaccct 34033813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 316
Target Start/End: Original strand, 31782553 - 31782728
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggtt 244  Q
    |||||||||||||| | |||||||| ||||||||||||||  |  | ||| ||||||||||||||||||||||||||||||  ||| | ||||||||||     
T  31782553 agggttacaagaattagtcttcaaacctaattctacccaa--ttcccaatctcttcccgtgaccaagagactcaatcctaacagtgttttgttcaaggtg 31782650  T
Q  245 att-----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | |     |||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||   |||||||||||||    
T  31782651 aatcaaaacaatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaa 31782728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 16093390 - 16093561
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattc 248  Q
    ||||||||||||| |||||||||||||||||||| || ||| |  |  | ||||||||||||||||||||||||||||| |||| | |||||||| | ||    
T  16093390 gttacaagaatcagtcttcaaatctaattctacctaa-gtcccagactt-ttcccgtgaccaagagactcaatcctaatagtgttttttcaaggtgaatc 16093487  T
Q  249 aa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||     ||| ||||||||| ||||||||||||| |||||||||| ||||||||||||   |||||||||||||    
T  16093488 aaaaagatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaa 16093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 32520645 - 32520536
Alignment:
Q  123 agtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatc 222  Q
    |||||||||||||| |||| ||||||||||||||||||| | |||||| ||||||||||||||||||  |||| ||||||||| | | ||||||||||||    
T  32520645 agtaactttacaaaagattccaaagggttacaagaatcagttttcaaacctaattctacccaaagtcatgaatctcttcccgtaatcgagagactcaatc 32520546  T
Q  223 ctaatggtgt 232  Q
     |||| ||||    
T  32520545 ttaatagtgt 32520536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 15143691 - 15143570
Alignment:
Q  105 gttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcc 202  Q
    |||||||||||||  | ||||||||||||||| ||  | |||||||||||||||||| | |||||||| ||||||||||||||| || | ||| ||||||    
T  15143691 gttccactataatg-atgagtaactttacaaaagagatatcaaagggttacaagaataagtcttcaaacctaattctacccaaaatc-caaatctcttcc 15143594  T
Q  203 cgtgaccaagagactcaatcctaa 226  Q
    ||||||||||||||||||||||||    
T  15143593 cgtgaccaagagactcaatcctaa 15143570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 10627450 - 10627274
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggtt 244  Q
    |||||||||||||||| |||||||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||||||  ||| | ||||||||||     
T  10627450 agggttacaagaatcagtcttcaaacctaattctacccta-gtctc-aatctcttcccgtgaccaagagactcaatcctaacagtgttttgttcaaggtg 10627353  T
Q  245 att------caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | |      |||||||||||||||| |||||||| |||| ||||| |||| |||| |||||||   |||||||||||||    
T  10627352 aatcaaaaacaatcctaaccctagtgtttgttgctaagagaaattctctataaacactagtttgtatgttggcttctaa 10627274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 4898013 - 4897833
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaa-ag-gatttc 143  Q
    ||||||||||| ||||||| || |||||  ||||| ||||||| ||| || | | | ||||||| |||||||  | |||||||||||||| || ||| ||    
T  4898013 aatttgtttacccagttcagtcgaatactgacctagtatgggggagaaagcagcccactgttccgctataatg-atgagtaactttacaatagagatatc 4897915  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    ||| |||||||||||||| |||||||  |||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||    
T  4897914 aaatggttacaagaatcagtcttcaagcctaattctacccaaagtcac-aatctcttcccgtgaccaagatactcaatcctaa 4897833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 15445263 - 15445408
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttca 144  Q
    ||||||||||| ||||||| ||||||||  ||||| | |||| |||||| | | ||  |||||||||||||  | ||||||||||||||| ||  | |||    
T  15445263 aatttgtttacccagttcagtccaatactgacctagtctgggaagagagcagcccttcgttccactataatg-atgagtaactttacaaaagagatatca 15445361  T
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctc 191  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||    
T  15445362 aagggttacaagaatcattcttcaaacctaattctactcaaagtctc 15445408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 312
Target Start/End: Complemental strand, 4754335 - 4754173
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttatt 247  Q
    |||||||||||| |  ||||||| ||||||||| |||||||| | ||| |||||| ||||||||||| |||||| ||||| |||| | |||||||| | |    
T  4754335 ggttacaagaattagccttcaaacctaattctatccaaagtcac-aatctcttccagtgaccaagaggctcaattctaatagtgttt-ttcaaggtgaat 4754238  T
Q  248 caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggctt 312  Q
    |||||  ||||||||| |||||||||||||  |   ||||||||||||||| ||  |||||||||    
T  4754237 caatctcaaccctagtgtttgttgccaagagcaaactctacaaaccctagtgtttgtgttggctt 4754173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 35430466 - 35430288
Alignment:
Q  45 agaatttgtttactcagttcaatccaataccaacctactatgg-ggagagagtaactctctgttccactataatttacgagtaactttacaaag-gattt 142  Q
    ||||||||||||  ||||||| ||||||||  ||||||| |   ||||| || | || || |||||||||||||  | |||||||||||||||| ||| |    
T  35430466 agaatttgtttatccagttcagtccaatactgacctactctaaaggagataggagctttccgttccactataatg-atgagtaactttacaaagagatat 35430368  T
Q  143 caaaggg-ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaat 221  Q
    |||| |  |||||||||||| |||||||| |||||||||||||||| | ||||| |||||||  ||||||||||||||||    
T  35430367 caaaagaattacaagaatcagtcttcaaacctaattctacccaaagacccgaatctcttccctagaccaagagactcaat 35430288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 36208785 - 36208684
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||| ||||||||||||| | ||| |||| |||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  36208785 gagtaactttacaaaagagatatcaatgggttacaagaataagtctacaaacctaattctacccaaagtctc-aatctcttcccgttaccaagagactca 36208687  T
Q  220 atc 222  Q
    |||    
T  36208686 atc 36208684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 316
Target Start/End: Original strand, 26406573 - 26406743
Alignment:
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt- 247  Q
    |||||||||| | |||||||| |||||||||| ||| ||||| ||| |||||| |||||||||||||||||||||||   || | |||||||||| | |     
T  26406573 ttacaagaattagtcttcaaacctaattctactcaa-gtctc-aatctcttcctgtgaccaagagactcaatcctaacaatgttttgttcaaggtgaatc 26406670  T
Q  248 ----caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
        |||||  ||||||||| ||||||||||||| |||| |||| ||||||||||||  ||||||| ||||||    
T  26406671 aaaacaatctcaaccctagtgtttgttgccaagagaattctctataaaccctagtttgtttgttggtttctaa 26406743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 22672917 - 22672762
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| |   ||||| ||||||||||||||||||||||||| ||| | |||||||||| | |    
T  22672917 gttacaagaatcagtcttcaaacctaattctacccaa-gtctc-agcctcttctcgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 22672820  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  22672819 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 22672762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 25838174 - 25838014
Alignment:
Q  166 tcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgt-gttcaaggttattcaa-----tcctaaccc 259  Q
    ||||||||||||||| ||||| |||||||| | | ||||||||||||||||||  ||||||| |||| | ||||||||| | ||||     ||  |||||    
T  25838174 tcaaatctaattctaaccaaa-tctcgaatttgtccccgtgaccaagagactctctcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccc 25838076  T
Q  260 tagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||| |||||| |||||| |||| |||| ||||| ||||||  |||||||||||||| ||||    
T  25838075 tagtgtttgttaccaagagaattctctataaaccatagtttctttgttggcttctaaacctt 25838014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 696035 - 695976
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  696035 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 695976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 13294766 - 13294690
Alignment:
Q  245 attcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    ||||||||| |||||||||  |||||||||||| |||| ||||||||| |||||||| |||||| ||| ||||||||    
T  13294766 attcaatcccaaccctagtgcttgttgccaagagaattctctacaaactctagttttgttgttgacttttaatcctt 13294690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16092321 - 16092380
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  16092321 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 16092380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 20505962 - 20506021
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  20505962 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 20506021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 42770925 - 42770870
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  42770925 tctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcagtcctaat 42770870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 2298104 - 2298181
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||||| |   ||||||||||||||||||||||||||||||| ||||    
T  2298104 caagaatcagtcttcaaacctaattctacccaa-gtctc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 2298181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 28786487 - 28786394
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    |||||||||||||||||||||| |||||||| ||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  28786487 gttacaagaatcaatcttcaaacctaattctgcccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 28786394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 11962532 - 11962608
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| |   |||||||||||||||||||| ||||||||||    
T  11962532 gttacaagaatcagtcttcaaacctaattctacccaa-gtctc-agcctcttcccgtgaccaagagacacaatcctaat 11962608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 17841348 - 17841504
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||| |||| || |   ||||||||||||| ||||||||||||||||| ||| | |||||||||| | |    
T  17841348 gttacaagaatcagtcttcaaacctaattctaccc-aagt-tccagcctcttcccgtgacctagagactcaatcctaatagtgctttgttcaaggtgaat 17841445  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||  ||||||||||||  ||||||||| ||||| |||| ||||||||||||    
T  17841446 caaaacaatctcaaccctagtattgtttgccaagagaaattctctataaaccctagttt 17841504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 300
Target Start/End: Original strand, 35385555 - 35385706
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt---- 247  Q
    ||||||||| |||||||| ||||||||||| |||||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |        
T  35385555 caagaatcagtcttcaaacctaattctacc-aaagtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaatcaaa 35385652  T
Q  248 -caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
     |||||| |||||||| | |||||||||||| ||||| |||| ||||||||||||    
T  35385653 acaatcccaaccctag-agttgttgccaagagaaattctctataaaccctagttt 35385706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 5777797 - 5777874
Alignment:
Q  245 attcaatcctaaccctagtatttgttgccaagaaaatta-tctacaaaccctagttttattgttggcttctaatcctt 321  Q
    ||||||||| ||||||| ||||||||| ||||| ||  | ||||||||| |||||||| |||||||||||||||||||    
T  5777797 attcaatcccaaccctactatttgttgtcaagagaaaaactctacaaactctagttttgttgttggcttctaatcctt 5777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 34477123 - 34477219
Alignment:
Q  122 gagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc 218  Q
    ||||||| |||||||| ||  |||| ||||||||||||| | ||| |||| |||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  34477123 gagtaacgttacaaagagaaatcaatgggttacaagaataagtctccaaacctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactc 34477219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 34479488 - 34479584
Alignment:
Q  122 gagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc 218  Q
    ||||||| |||||||| ||  |||| ||||||||||||| | ||| |||| |||||||||||||||||||| ||| |||||| || ||||||||||||    
T  34479488 gagtaacgttacaaagagaaatcaatgggttacaagaataagtctccaaacctaattctacccaaagtctc-aatctcttcctgtaaccaagagactc 34479584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6661307 - 6661366
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||    
T  6661307 ctaattgtacccaaaatctc-aatttcttcccgtgaccaagagactcaatcctaatagtgt 6661366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6756652 - 6756593
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||| ||||    
T  6756652 ctaattctacccaaagtctc-aatctcttcccgtaaccaagatactcaatcctaatagtgt 6756593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20043208 - 20043149
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  20043208 ctaattctatccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 20043149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 24127014 - 24126875
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatc--ctaaccctagtatttgt 269  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||| |||| |   |||||| | ||||||  | |||||||||||||||    
T  24127014 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagacttaatcctaatagtgt-ttcccaaggtcaatcaatcttcaaaccctagtatttgt 24126917  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttg 308  Q
    || |||||   ||| | | |||||||||||||||| ||||||    
T  24126916 tgacaagagacaaactctatacaaaccctagttttgttgttg 24126875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 25452575 - 25452485
Alignment:
Q  152 acaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    |||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  25452575 acaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 25452485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 31472734 - 31472793
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||||||||||||||||||||||||||| ||||    
T  31472734 ctaattctaccaaaagtccc-aatctcttcccgtgaccaagagactcaatcctaatagtgt 31472793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 1170890 - 1170813
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  1170890 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 1170813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 25445576 - 25445503
Alignment:
Q  152 acaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||| |||||||| |||||||||||||| ||| | |   |||||||||||||||||||||||||||||||    
T  25445576 acaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaat 25445503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 31466099 - 31466153
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||    
T  31466099 ctaattctacccaaagtc-caaatctcttcccgtaaccaagagactcaatcctaat 31466153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 1240511 - 1240340
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| ||||||||||||||| || | |   |||||||||| | |||||||||||||||||| ||| | |||||||||| | |    
T  1240511 gttacaagaatcagtcttcaaacctaattctacccaaa-tc-ccagcctcttcccgtgcctaagagactcaatcctaatagtgttttgttcaaggtgaat 1240414  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  ||||||| |||| ||| |||||| ||||||||||||   |||||||||||||    
T  1240413 caaaacaatcccaaccctagt-gttgttgcaaagagaaaatatctataaaccctagtttgtatgttggcttctaa 1240340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 38960250 - 38960311
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  38960250 tctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 38960311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 9020376 - 9020273
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| |||||||| |||| |||| | | |||||| | ||||    ||||||||| |||||||    
T  9020376 ctaattctacccaaag-ctccaatctcttcccgtgaccaagaaactcaatcttaatagtgt-tttccaaggtgaatcaacttcaaccctagtgtttgttg 9020279  T
Q  272 ccaaga 277  Q
    ||||||    
T  9020278 ccaaga 9020273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1189730 - 1189789
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||| || |||||||||||||||| |||| ||||    
T  1189730 ctaattctacccaaagtctc-aatctcttcctgtaaccaagagactcaatcataatagtgt 1189789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2954575 - 2954516
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||| ||| || |||||||||||||||||| ||||    
T  2954575 ctaattctacccaaagtctc-aatctcttctcgtaactaagagactcaatcctaatagtgt 2954516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6745226 - 6745167
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||| ||||    
T  6745226 ctaattctacccaaagtccc-aacctcttcccgtaaccaagagactcaatcctaatagtgt 6745167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6747463 - 6747404
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | ||||||||| ||||||||||||||||||||| ||||    
T  6747463 ctaattctacccaaagtccc-agtctcttcccgtaaccaagagactcaatcctaatagtgt 6747404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 10529220 - 10529279
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  10529220 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 10529279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 18511333 - 18511392
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  18511333 ctaattctatccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 18511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 20045168 - 20045029
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    |||||||||||||||||| | ||| ||||||||  |||||||||||||||| |||| |||| |   |||||| | |||| |||  ||||||||| |||||    
T  20045168 ctaattctacccaaagtccc-aatctcttcccggaaccaagagactcaatcataatagtgt-ttcccaaggtgaatcaaccctcaaaccctagtgtttgt 20045071  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttg 308  Q
    ||||||||   ||| | | |||||||||||||||| ||||||    
T  20045070 tgccaagagacaaactctatacaaaccctagttttgttgttg 20045029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39398114 - 39398173
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| || ||| |||| |||| ||||||||||||||||||||| ||||    
T  39398114 ctaattctacccaaagt-tccaatctctttccgtaaccaagagactcaatcctaatagtgt 39398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39798205 - 39798146
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  39798205 ctaattctacccaaagccac-aatctcttcccgtaaccaagagactcaatcctaatagtgt 39798146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 2724036 - 2724001
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2724036 tcttcccgtaaccaagagactcaatcctaatggtgt 2724001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 18509440 - 18509498
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| | | | ||||||||| ||||||||||||||||||||| ||||    
T  18509440 taattctacccaaagtccc-attctcttcccgtaaccaagagactcaatcctaatagtgt 18509498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 18596803 - 18596750
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||||||| ||||||| | ||| ||||||||| ||||||||||||||||||||    
T  18596803 ctaattctactcaaagtccc-aatctcttcccgtaaccaagagactcaatcctaa 18596750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 40221747 - 40221621
Alignment:
Q  105 gttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcc 202  Q
    |||||||||||||  | ||||||||||||||| ||  | |||| ||||||||||||| | |||||    ||||||||||| |||||| | ||| ||||||    
T  40221747 gttccactataatg-atgagtaactttacaaaagagatatcaatgggttacaagaataagtcttccgc-ctaattctaccaaaagtccc-aatctcttcc 40221651  T
Q  203 cgtgaccaagagactcaatcctaatggtgt 232  Q
     || ||||||||||||||||||||| ||||    
T  40221650 tgtaaccaagagactcaatcctaatagtgt 40221621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 10749859 - 10749799
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  10749859 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 10749799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15354694 - 15354754
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  15354694 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 15354754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15356970 - 15357030
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  15356970 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 15357030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23665203 - 23665143
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  23665203 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 23665143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 23793384 - 23793444
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  23793384 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 23793444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 31179491 - 31179551
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  31179491 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 31179551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 31542894 - 31542834
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  31542894 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 31542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 31545239 - 31545179
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc-aatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||| ||||||||| ||||    
T  31545239 ctaattctacccaaagtccc-aatttcttcccgtaaccaagagactctaatcctaatagtgt 31545179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 10586990 - 10586931
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||| |||| | ||||||||| ||||||||| ||||    
T  10586990 ctaattctacccaaagtctc-aatctctttccgtaagcaagagactgaatcctaatagtgt 10586931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25804183 - 25804124
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||| ||| ||||||||||||||||||||| ||||    
T  25804183 ctaattctacccaaagcccc-aatctcttctcgtaaccaagagactcaatcctaatagtgt 25804124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 27912694 - 27912635
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||| ||| ||||||||||||||||||||| ||||    
T  27912694 ctaattctacccaaagtctc-agcctcttcacgtaaccaagagactcaatcctaatagtgt 27912635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34530787 - 34530846
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| ||||||| | ||| |||||||||  |||||||||||||||||||| ||||    
T  34530787 ctaattctactcaaagtc-ctaatctcttcccgtagccaagagactcaatcctaatagtgt 34530846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39854641 - 39854582
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| || | | ||||||||| |||| |||||||||||||||| ||||    
T  39854641 ctaattctacccaaagt-tccagtctcttcccgtaaccatgagactcaatcctaatagtgt 39854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 42238343 - 42238307
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  42238343 gttacaagaatcagtcttcaaacctaattctacccaa 42238307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 21 - 321
Target Start/End: Original strand, 10942479 - 10942793
Alignment:
Q  21 cgagagaggagagaaaagaacattaga--atttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataat 117  Q
    ||||||||||||||||| ||||  |||  ||||||||||  |||||  ||||||||  ||||||| | ||||||| |  | ||||  |||||||||||||    
T  10942479 cgagagaggagagaaaaaaacacaagagaatttgtttacctagttcggtccaatactgacctactctaggggagacaccagctcttcgttccactataat 10942578  T
Q  118 ttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagact 217  Q
    | | |||||| |||||||||||||  ||||||||||||||||||||| |||||  ||||||||||||||||| ||||| |||||||||||| ||||||||    
T  10942579 tgatgagtaattttacaaaggattcaaaagggttacaagaatcaatcctcaaacataattctacccaaagtcccgaatttcttcccgtgacaaagagact 10942678  T
Q  218 caatcctaatggtgtgtgttcaagg-----------ttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgt 306  Q
    |||||||||| |||| | |||||||           | ||||| ||  ||||||||| ||||||||||||| |||| ||||||| ||||||| |||||||    
T  10942679 caatcctaatagtgtttcttcaaggtgaaacaatgataattcattcacaaccctagtgtttgttgccaagagaattctctacaatccctagtattattgt 10942778  T
Q  307 tggcttctaatcctt 321  Q
    |||||||||||||||    
T  10942779 tggcttctaatcctt 10942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 21 - 321
Target Start/End: Original strand, 10948348 - 10948662
Alignment:
Q  21 cgagagaggagagaaaagaacattaga--atttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataat 117  Q
    ||||||||||||||||| ||||  |||  ||||||||||  |||||  ||||||||  ||||||| | ||||||| |  | ||||  |||||||||||||    
T  10948348 cgagagaggagagaaaaaaacacaagagaatttgtttacctagttcggtccaatactgacctactctaggggagacaccagctcttcgttccactataat 10948447  T
Q  118 ttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagact 217  Q
    | | |||||| |||||||||||||  ||||||||||||||||||||| |||||  ||||||||||||||||| ||||| |||||||||||| ||||||||    
T  10948448 tgatgagtaattttacaaaggattcaaaagggttacaagaatcaatcctcaaacataattctacccaaagtcccgaatttcttcccgtgacaaagagact 10948547  T
Q  218 caatcctaatggtgtgtgttcaagg-----------ttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgt 306  Q
    |||||||||| |||| | |||||||           | ||||| ||  ||||||||| ||||||||||||| |||| ||||||| ||||||| |||||||    
T  10948548 caatcctaatagtgtttcttcaaggtgaaacaatgataattcattcacaaccctagtgtttgttgccaagagaattctctacaatccctagtattattgt 10948647  T
Q  307 tggcttctaatcctt 321  Q
    |||||||||||||||    
T  10948648 tggcttctaatcctt 10948662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 85 - 319
Target Start/End: Original strand, 30720646 - 30720891
Alignment:
Q  85 tggggagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    ||||| ||||||| ||||||| |||||||||||||   |||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||    
T  30720646 tggggggagagtagctctctggtccactataattttttagtaactttacaaaagatttcaaagggttacaagaattagtcttcaaacctaattctaccca 30720745  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag-----------gttattcaatcctaaccctagtatttgttgcc 273  Q
    ||||| ||||| ||||| |||| | |||||||||||||||||| |||| | | ||||           || ||||||||  ||||||||| |||| ||||    
T  30720746 aagtcacgaatctcttctcgtgccaaagagactcaatcctaatagtgtttctccaagatgaatcaatagtgattcaatctcaaccctagtgtttggtgcc 30720845  T
Q  274 aagaaaattatctacaaaccctagttttattgttggcttctaatcc 319  Q
    |||| |||| ||||||||||||||||||| ||||||||| ||||||    
T  30720846 aagagaattctctacaaaccctagttttagtgttggcttataatcc 30720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 122 - 368
Target Start/End: Original strand, 43482926 - 43483185
Alignment:
Q  122 gagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaat 221  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||| ||||||||  |||| |||| | |||||||||||  |||||    
T  43482926 gagtaactttacaaaggatttcaaagggttacaagaatcactcttcaaacttaaatctatccaaagtcatgaatctctttcggtgaccaagagtttcaat 43483025  T
Q  222 cctaatggtgtgtgttcaagg-----------ttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggc 310  Q
    ||||||| ||| |||||||||           | ||||||||| ||||||| | |||||||  |||| ||   ||||||||||||| |||||||||||||    
T  43483026 cctaatgttgtttgttcaaggtgaaacaatgataattcaatcccaaccctaatgtttgttgataagataaaactctacaaaccctaattttattgttggc 43483125  T
Q  311 ttctaatcc---tttttctactctttctttcatcttatacaagatctgaatttatagagaa 368  Q
    ||| |||||   |||||||||| | | |||||||| ||||| ||||||||||||| |||||    
T  43483126 ttcgaatccttatttttctact-tatttttcatctgatacatgatctgaatttattgagaa 43483185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 321
Target Start/End: Complemental strand, 26345811 - 26345580
Alignment:
Q  100 tctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatct 199  Q
    |||| ||||||||||||||   ||||||||||| ||| |||| ||| ||||| ||||||||| ||||||||  ||||||||||||||||||||||| |||    
T  26345811 tctccgttccactataattattgagtaactttataaaagattccaatgggtttcaagaatcagtcttcaaacttaattctacccaaagtctcgaatctct 26345712  T
Q  200 tcccgtgaccaagagactcaatcctaatggtgtgtg---------ttcaa-ggttattcaatcctaaccctagtatttgttgccaagaaaattatctaca 289  Q
    | |||||||||||||||||||||||||| |||| ||          |||| |||  |||||||  ||||||| | |||||| |||||| || | ||||||    
T  26345711 ttccgtgaccaagagactcaatcctaatagtgtttgctaaggtgaatcaacggtgtttcaatctcaaccctaatgtttgttaccaagagaaatctctaca 26345612  T
Q  290 aaccctagttttattgttggcttctaatcctt 321  Q
    || ||||||||| |||||||||||||||||||    
T  26345611 aatcctagttttgttgttggcttctaatcctt 26345580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 41303082 - 41303209
Alignment:
Q  99 ctctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatc 198  Q
    |||||||||||||||||||  | ||||||||||||||| |||| |||| ||||||| |||||| ||||||||  ||||||||||||||||| ||||| ||    
T  41303082 ctctctgttccactataatg-atgagtaactttacaaaagattccaaaaggttacatgaatcagtcttcaaacataattctacccaaagtcccgaatctc 41303180  T
Q  199 ttcccgtgaccaagagactcaatcctaat 227  Q
    |||| |||||||||||||| |||||||||    
T  41303181 ttcctgtgaccaagagacttaatcctaat 41303209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 28458924 - 28459009
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||    
T  28458924 agggttacaagaatcagtcttcaaacctaattctacccaaagtc-ccaatatctttccgtgaccaagagactcaatcctaatagtgt 28459009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 316
Target Start/End: Complemental strand, 43139579 - 43139366
Alignment:
Q  101 ctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatct 199  Q
    |||||| ||||||||||  | |||||||||||||||| ||  ||||| |||||||| ||| | |||| | | ||||||||||| |||||||| |||||||    
T  43139579 ctctgtaccactataatg-atgagtaactttacaaagagaaatcaaaaggttacaataattagtctttagacctaattctacctaaagtctc-aatatct 43139482  T
Q  200 tcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagtt 299  Q
    ||||||||||||||||||||||||||||  ||| |   |||| | | ||||||  ||||||||| |||||||||||||  |   ||||||||||| ||||    
T  43139481 tcccgtgaccaagagactcaatcctaataatgt-ttcccaagatgaatcaatctcaaccctagtgtttgttgccaagagcaaactctacaaacccaagtt 43139383  T
Q  300 ttattgttggcttctaa 316  Q
    ||  |||||||||||||    
T  43139382 tttgtgttggcttctaa 43139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 316
Target Start/End: Complemental strand, 35107452 - 35107286
Alignment:
Q  148 ggttacaagaatcaatcttcaaa-tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttat 246  Q
    |||||||||||| | |||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||  ||| |  ||||||| |     
T  35107452 ggttacaagaataagtcttcaaaatctaattctacccaaagtcac-aatctcttcccgtgaccaagagactcaatcctaataatgt-ttctcaaggtgaa 35107355  T
Q  247 tcaatcctaaccctagtatttgttgccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||| |||||   | |||||||||||||  ||| | | |||||||||||||||| |||||| |||||||    
T  35107354 tcaatcccaaccc---tgtttgttgccaagagcaaactctatacaaaccctagttttcttgttgacttctaa 35107286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 40699579 - 40699448
Alignment:
Q  101 ctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatc 198  Q
    |||||||||||||||||  | ||||||||||||||| ||  | ||||||| |||||| ||| | |||||||| |||||||||||||||||| | ||| ||    
T  40699579 ctctgttccactataatg-atgagtaactttacaaaagagatatcaaaggattacaaaaataagtcttcaaacctaattctacccaaagtccc-aatctc 40699482  T
Q  199 ttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||| ||||||||||||||||||||||||| ||||    
T  40699481 ttctcgtgaccaagagactcaatcctaatagtgt 40699448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 17921862 - 17921761
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag 241  Q
    |||||||||| ||||||||| | || ||| |||||||||||||||||| ||||| |||||| || ||||||||||||||||||||| |||| | ||||||    
T  17921862 tcaaagggttgcaagaatcagttttaaaacctaattctacccaaagtcccgaatctcttcctgtaaccaagagactcaatcctaatagtgtttcttcaag 17921763  T
Q  242 gt 243  Q
    ||    
T  17921762 gt 17921761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 331
Target Start/End: Original strand, 27247974 - 27248196
Alignment:
Q  123 agtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatc 222  Q
    |||||||||||||| |||| ||||| ||||||||| ||  | |||||| ||||||||||||||||||  | || ||||||||||||||||||||||||||    
T  27247974 agtaactttacaaaagattccaaagagttacaagagtctgt-ttcaaacctaattctacccaaagtcctggatctcttcccgtgaccaagagactcaatc 27248072  T
Q  223 c--taatggtgtgtgttcaa-----------ggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttgg 309  Q
    |  ||||  ||| | | |||           ||| ||||||||  | || |||| ||||||||||||| ||||||||||||||| ||| ||| |||||||    
T  27248073 ctataataatgtttctccaaagtgaatcaatggtgattcaatctcacccgtagtgtttgttgccaagagaattatctacaaaccttagctttgttgttgg 27248172  T
Q  310 cttctaatcct--ttttctactct 331  Q
    |||||||||||  |||||||||||    
T  27248173 cttctaatccttgttttctactct 27248196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 15694089 - 15693977
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | ||||| |||||||||||| | |||||||| |||||||||||||||||| | ||| |||||| ||||||||||||||      
T  15694089 gagtaactttacaaaagagatatcaaaaggttacaagaattagtcttcaaacctaattctacccaaagtcccaaatctcttcctgtgaccaagagacttt 15693990  T
Q  220 atcctaatggtgt 232  Q
    |||||||| ||||    
T  15693989 atcctaatagtgt 15693977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 13828378 - 13828503
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||||| ||  |||||||||||||||| | |||||| |||||||| ||  | |||||||| ||||||||| | ||||||||  |||||||||||    
T  13828378 ggggagagagtagctaactgttccactataatt-atgagtaattttacaaaagagatatcaaagggctacaagaataagtcttcaaacataattctaccc 13828476  T
Q  184 aaagtctcgaatatcttcccgtgaccaa 211  Q
    ||||||| |||| |||||||||||||||    
T  13828477 aaagtct-gaatctcttcccgtgaccaa 13828503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 20589854 - 20589771
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||| |||||| |||||| | ||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  20589854 tcaatgggttaaaagaataagtctccaaacctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaa 20589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 316
Target Start/End: Original strand, 11578230 - 11578373
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||| |   | |||| | |||| || ||||||||  |||||||    
T  11578230 ctaattctacccaaagtccc-aatctcttcccgtgaccaagagactcaatcctaatagtgt-ttcccgaggtgaatcaaccccaaccctag--tttgttg 11578325  T
Q  272 ccaag---aaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||   |||||| | |||||||||||||||| |||||| |||||||    
T  11578326 ccaagagaaaaattctatacaaaccctagtttttttgttgacttctaa 11578373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 375
Target Start/End: Original strand, 41304585 - 41304724
Alignment:
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcc----tttttctactcttt----ct 335  Q
    ||||||||| |||||||| | ||||||||||| | ||   | |||||||||||||||| |||||||||||||| ||    |||||||||||| |    ||    
T  41304585 tattcaatcttaaccctaatgtttgttgccaatagaaaactttacaaaccctagttttgttgttggcttctaaacccttgtttttctactctctacaact 41304684  T
Q  336 ttcatcttatacaagatctgaatttatagagaaatataac 375  Q
    ||||||| || ||||||||| |||||||||||||||||||    
T  41304685 ttcatctaatgcaagatctgtatttatagagaaatataac 41304724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 17932717 - 17932562
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  17932717 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 17932620  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  17932619 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 17932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 27136195 - 27136350
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||| | ||||||||||| | ||| |||| |||||||||| ||||||| | ||| |||| |||||||||||||| |||    
T  27136195 gagtaactttacaaaagagatatcaatgagttacaagaataagtctccaaacctaattctactcaaagtccc-aatttctttccgtgaccaagagattca 27136293  T
Q  220 atcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga 277  Q
    |||||||| |||| | | |||| | | |||| || ||||||||| |||||||||||||    
T  27136294 atcctaatagtgt-tttccaagatgaatcaaccccaaccctagtgtttgttgccaaga 27136350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 39680189 - 39680047
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | ||||| |||||||||||||  | ||||  |||||||||| |||   || | ||| |||||||||||||||||| |||||||||||||    
T  39680189 ggggagagagcagctctccgttccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcaatcttcaaacctaattctaccca 39680093  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | ||||| |   ||||| ||||||||||||||||||||||||| ||||    
T  39680092 a-gtctc-agcctcttctcgtgaccaagagactcaatcctaatagtgt 39680047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 7503052 - 7502918
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaa-----------ggttattcaatcctaacccta 261  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||| | | |||           ||| ||||||||| |||||||    
T  7503052 taattctacccaaagtctcaaatctcttcccttgaccaagatactcaatcctaatagtgtttctccaaggtggatcaatggtgattcaatcccaacccta 7502953  T
Q  262 gtatttgttgccaagaaaattatctacaaacccta 296  Q
    || ||||||| ||||| |||| |||||||||||||    
T  7502952 gtgtttgttgtcaagagaattctctacaaacccta 7502918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 34575207 - 34575290
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| |||||| | |||||||| |||||||||||||||||| ||||| | |||||| ||||||||||||| |||||||| ||||    
T  34575207 ggttataagaattagtcttcaaacctaattctacccaaagtcccgaatct-ttcccgagaccaagagactccatcctaatagtgt 34575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 277
Target Start/End: Original strand, 18800348 - 18800537
Alignment:
Q  85 tggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacc 182  Q
    ||||||||||||| | ||| ||| |||||||||  ||||||||||||||||| ||  | |||| ||||||||||||| | ||| |    |||||||||||    
T  18800348 tggggagagagtagccctccgtttcactataatg-acgagtaactttacaaaagagatatcaatgggttacaagaataagtctccctc-ctaattctacc 18800445  T
Q  183 caaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga 277  Q
    ||||| | | ||| |||||| |||||||||||||||||||||||| |||| |   |||||| | |||| || ||||||||| |||||||||||||    
T  18800446 caaagcccc-aatctcttcctgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaa-cccaaccctagtgtttgttgccaaga 18800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 20054864 - 20054945
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  20054864 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 20054945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 316
Target Start/End: Original strand, 20146730 - 20146874
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    ||||||||||||||| |||| ||| | ||||||||||||||||||||||||||| |  ||| |   |||||| | ||||||| |||| |||| |||||||    
T  20146730 ctaattctacccaaaatctc-aatcttttcccgtgaccaagagactcaatcctactattgt-ttcccaaggtgaatcaatcccaaccatagtgtttgttg 20146827  T
Q  272 ccaa--gaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||  | ||| | | |||||||||||||||| |||||| |||||||    
T  20146828 ccaagggcaaactctatacaaaccctagttttcttgttgacttctaa 20146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 27517738 - 27517831
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  27517738 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 27517831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 17943620 - 17943449
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||| | |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  17943620 gttacaagaattagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgatttgttcaaggtgaat 17943523  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||| ||||||   |||||||||||||    
T  17943522 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccatagtttgtatgttggcttctaa 17943449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 30479073 - 30478922
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt---- 247  Q
    ||||||||| |||||||| |||||||||||||| ||| | | | ||||||||||| ||||||||||||||||||| ||| | |||||||||| | |        
T  30479073 caagaatcagtcttcaaacctaattctacccaa-gtccc-agtctcttcccgtgatcaagagactcaatcctaatagtgctttgttcaaggtgaatcaaa 30478976  T
Q  248 -caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
     |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  30478975 acaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 30478922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 37170851 - 37171022
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||| ||||| |||||||| |||||||||||||| ||| | |   ||||||| ||||||||||||||||||||||| ||| | |||||||||| |||    
T  37170851 gttacaaaaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccatgaccaagagactcaatcctaatagtgctttgttcaaggtgatt 37170948  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||| ||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  37170949 caaaacaatcccaaccctggt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 37171022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 39287256 - 39287198
Alignment:
Q  258 cctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||| |||||||| |||| |||| |||||||||||||||||| ||||||||||||||    
T  39287256 cctagtgtttgttgctaagagaattctctacaaaccctagttttcttgttggcttctaa 39287198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 39687127 - 39686985
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | ||||| |||||||||||||  | ||||  |||||||||| |||   || | ||| ||||||||| |||||||| |||||||||||||    
T  39687127 ggggagagagcagctctccgttccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcagtcttcaaacctaattctaccca 39687031  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  39687030 a-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 39686985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 45158389 - 45158316
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    ||||||||||| ||||||  ||||||||| |||||||  |||| |||||||||||||||||||||  |||||||    
T  45158389 caagaatcaatattcaaacataattctactcaaagtcctgaatctcttcccgtgaccaagagactatatcctaa 45158316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15539596 - 15539655
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||| ||||    
T  15539596 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagaatcaatcctaatagtgt 15539655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 30261863 - 30261939
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc 218  Q
    |||||| ||||||||||| | |||| ||| ||||||||||||||||||  |||| ||||||||| | ||||||||||    
T  30261863 tcaaagagttacaagaattagtcttgaaacctaattctacccaaagtcctgaatttcttcccgtaatcaagagactc 30261939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 316
Target Start/End: Complemental strand, 35028732 - 35028566
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttatt 247  Q
    |||||||||||| | | ||||||  |||||||||||||||| || ||| ||||| ||||| |||||||||||||| |||| |||| | | ||| |  | |    
T  35028732 ggttacaagaattagtattcaaacataattctacccaaagtgtc-aatctcttctcgtgatcaagagactcaatcataatagtgt-tttccaatgcgaat 35028635  T
Q  248 caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||  ||||||||| |||||| ||||||  |   ||||||||||| | |||||||||||| ||||||    
T  35028634 caatctcaaccctagtgtttgttaccaagagcaaactctacaaacccaaattttattgttggattctaa 35028566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 2736284 - 2736207
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| ||||||||||| |||||| | |   ||||||||||||||||||||||||||||||| ||||    
T  2736284 caagaatcagtcttcaaacctaattctacc-aaagtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 2736207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 2741020 - 2740943
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||| ||| |||||||||||||| ||| | ||  ||||||||||||||||||||||||||||||| ||||    
T  2741020 caagaatcagtctttaaacctaattctacccaa-gtccc-aacctcttcccgtgaccaagagactcaatcctaatagtgt 2740943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 17462515 - 17462438
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  17462515 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 17462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 45567488 - 45567411
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  45567488 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 45567411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 12781366 - 12781491
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||| ||||| | |     |||||| |||||||||  |||||||||||| ||||| |||| |    
T  12781366 tcttcccgtgaccaagagactcaatcctaatagtgctttgtttaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagagaaattctctata 12781464  T
Q  290 aaccctagttttattgttggcttctaa 316  Q
    ||||||||||| | |||||| ||||||    
T  12781465 aaccctagtttgaatgttggtttctaa 12781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 22712661 - 22712770
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||| | |||||||||||| ||||| |||| |    
T  22712661 tcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctag-agttgttgccaagagaaattctctata 22712759  T
Q  290 aaccctagttt 300  Q
    |||||||||||    
T  22712760 aaccctagttt 22712770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 28196800 - 28196712
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||| ||||||||||||| |||||||    |||||||||||||||| ||| ||| ||||||| | ||||||||||||||||||||| ||||    
T  28196800 tcaatgggttacaagaataaatcttccgc-ctaattctacccaaagcctc-aatctcttcccataaccaagagactcaatcctaatagtgt 28196712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 300
Target Start/End: Complemental strand, 33604122 - 33603922
Alignment:
Q  105 gttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttccc 203  Q
    |||||||||||||  | ||||||||||||||||  || ||||| ||||| |||||| | |||||||| |||||||| || |||||||| |||  ||||||    
T  33604122 gttccactataatg-atgagtaactttacaaagatatatcaaaaggttagaagaattagtcttcaaacctaattcttcctaaagtctc-aatcacttccc 33604025  T
Q  204 gtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctag 297  Q
     ||||||| |||||||||  |||| ||| | |||||||||| | |     |||||| ||||||| | ||||||||||| | || | |||| |||||||||    
T  33604024 atgaccaaaagactcaattataatagtgttttgttcaaggtgaatcaaaacaatcccaaccctaatgtttgttgccaaaagaaatctctataaaccctag 33603925  T
Q  298 ttt 300  Q
    |||    
T  33603924 ttt 33603922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 41304487 - 41304583
Alignment:
Q  89 gagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaa 186  Q
    |||| |||| ||||| ||||||||||||   | ||||||||||| ||| |||| |||| |||||||||||||| ||||||||  |||||||| |||||    
T  41304487 gagaaagtagctctccgttccactataacg-atgagtaactttagaaaagattccaaaaggttacaagaatcagtcttcaaacataattctatccaaa 41304583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 232
Target Start/End: Original strand, 6258843 - 6258995
Alignment:
Q  77 acctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatcta 174  Q
    ||||| ||||||||||||| | | ||| ||| |||||||||  | ||||||||||||||| ||  | |||| ||||||||||||| | ||| | |  |||    
T  6258843 acctagtatggggagagagcagccctccgtttcactataata-atgagtaactttacaaaagagatatcaatgggttacaagaataagtctcccac-cta 6258940  T
Q  175 attctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| | | |   ||||||||| ||||||||||||||||||||| ||||    
T  6258941 attctacccaaagccccaa---tcttcccgtaaccaagagactcaatcctaatagtgt 6258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 17848574 - 17848519
Alignment:
Q  176 ttctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  17848574 ttctacccaaagcctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 17848519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 17849251 - 17849192
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||| |||| |||||||||||||||| |||| ||||    
T  17849251 ctaattctacccaaagtctc-aatctcttaccgtaaccaagagactcaatcttaatagtgt 17849192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 19502132 - 19502191
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  19502132 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 19502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 27583484 - 27583563
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga 277  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||| | ||| ||| |||| |||| || ||||||||||    
T  27583484 tcttcccgtgaccaagagactcaatcctaatagtgt-tttccaaggtgaatcactcccaaccttagtgttcgttgccaaga 27583563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34979700 - 34979759
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||| ||||    
T  34979700 ctaattctaccgaaagtc-cgaatctcttcccgtaaccaagagactcaatcttaatagtgt 34979759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 42452915 - 42452856
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  42452915 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 42452856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 7502917 - 7502866
Alignment:
Q  270 tgccaagaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||||||| |||| |||||||||||||||||| ||||| |||||| ||||||    
T  7502917 tgccaagataattctctacaaaccctagttttgttgtttgcttctgatcctt 7502866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 13910165 - 13910219
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||||||||| || | | ||||||||| |||||||||||||||||||||    
T  13910165 ctaattctacccaaagt-tccagtctcttcccgtaaccaagagactcaatcctaat 13910219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 22717370 - 22717405
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22717370 tcttcccgtgaccaagagactcaatcctaatagtgt 22717405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 22874264 - 22874210
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||||||    
T  22874264 ctaattctaccgaaagcctc-aatctcttcccgtgactaagagactcaatcctaat 22874210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 33674551 - 33674597
Alignment:
Q  198 cttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  33674551 cttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 33674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 35218083 - 35218143
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  35218083 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 35218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 36558984 - 36559044
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  36558984 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 36559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 36561261 - 36561321
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  36561261 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 36561321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 45332301 - 45332361
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  45332301 ctaattctacccaaagtc-ctaatctcttcccgtaaccaagagactccaatcctaatagtgt 45332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 40032179 - 40032238
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||  |||||| || ||||||||||||||||||||| ||||    
T  40032179 ctaattctacccaaagtc-ctaacctcttcctgtaaccaagagactcaatcctaatagtgt 40032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 42064649 - 42064590
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  42064649 ctaattctatccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 42064590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 42923630 - 42923689
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||| | ||||||||||||||||||||| ||||    
T  42923630 ctaattctacccaaagcccc-aatctcttcccataaccaagagactcaatcctaatagtgt 42923689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 46 - 316
Target Start/End: Complemental strand, 27420915 - 27420645
Alignment:
Q  46 gaatttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaaaggatttca 144  Q
    ||||||||||||  |||||  ||||| ||  ||||||||||||| |||||| |||||| ||||||| ||||||  | ||||||||||||||| |||| ||    
T  27420915 gaatttgtttacctagttcggtccaaaactgacctactatgggggagagagcaactctatgttccattataatg-atgagtaactttacaaaagattcca 27420817  T
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggtt 244  Q
    ||||||||||||||||| |||||||| |||||| |||| |||  ||||||| ||||||||||||||||||||| | | ||||| || | | | ||  ||     
T  27420816 aagggttacaagaatcagtcttcaaacctaattataccgaaaacctcgaatctcttcccgtgaccaagagactgagttctaatagtatttctccagcgtg 27420717  T
Q  245 attcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | ||||||| |||| |||| |||||||||||||||||| ||||||||||||| |||| ||| ||||||||||    
T  27420716 aatcaatcccaaccatagtgtttgttgccaagaaaattctctacaaaccctaattttgttgctggcttctaa 27420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 312
Target Start/End: Original strand, 36871335 - 36871561
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | | ||| |||||||||||||  | || ||||||||||||| |||  ||||||||| ||||||| | |||||||| |||||||||||||    
T  36871335 ggggagagagcagccctccgttccactataatg-atgattaactttacaaagagataacaaagggttgcaagaataagtcttcaaacctaattctaccca 36871433  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaatt 282  Q
    ||||| | ||| |||| ||||||||||||||||||||| |||  |||| | | |||||| | |||||||||||||| || |||||||||||||  ||| |    
T  36871434 aagtc-ccaatctctttccgtgaccaagagactcaatcttaacagtgt-tttccaaggtgaatcaatcctaaccctggtgtttgttgccaagagcaaact 36871531  T
Q  283 atctacaaaccctagttttattgttggctt 312  Q
     | ||||| |||||||||| ||||||||||    
T  36871532 ctatacaagccctagttttcttgttggctt 36871561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 23942007 - 23941845
Alignment:
Q  67 tccaataccaacctactatgg-ggagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatct 165  Q
    ||||||||  ||||||||||| |||||||| ||||||  | |||||||||||||  ||||||||||||||| |||| |||| |||||||||||| | | |    
T  23942007 tccaatactgacctactatggaggagagagcaactcttcgctccactataatttttgagtaactttacaaaagattccaaacggttacaagaataagtat 23941908  T
Q  166 tcaaatctaattctacccaaagtctcgaatatcttcccgtgacc-aagagactcaatcctaat 227  Q
    ||||| ||||||||||||||| || ||||| | ||||||||||| |||||||| || ||||||    
T  23941907 tcaaacctaattctacccaaattcccgaatcttttcccgtgaccaaagagacttaagcctaat 23941845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 321
Target Start/End: Complemental strand, 13893609 - 13893368
Alignment:
Q  86 ggggagagagtaactctctgttccactataatt-tacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | |||||||||||||||||||  || ||||  |||||||||| ||| |  | ||||||||||||||| |||||||| |||||| |||||    
T  13893609 ggggagagagaagctctctgttccactataatgatatgagtttctttacaaagagatattga-gggttacaagaatcagtcttcaaacctaattttaccc 13893511  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggt-gtgtgttcaaggttatt------caatcctaaccctagtatttgttgccaag 276  Q
     ||||||| ||| ||||||||||||||||||||||||| |||| |||  | |||||||||| | |      |||||| ||||||||| ||||||||||||    
T  13893510 -aagtctc-aatctcttcccgtgaccaagagactcaattctaacggtattttgttcaaggtgaatcaaaaacaatcccaaccctagtgtttgttgccaag 13893413  T
Q  277 aaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    | |||| |||| |||||||||||||  ||||| ||||||| ||||    
T  13893412 agaattctctataaaccctagtttttatgttgacttctaaacctt 13893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 316
Target Start/End: Complemental strand, 7768828 - 7768564
Alignment:
Q  53 tttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaaagg-atttcaaagggt 150  Q
    ||||| || ||| |||||||||  ||||| ||||||| || ||||||| ||  |||||||||||||  | ||||||||||||||||| || | ||| |||    
T  7768828 tttacccaattcgatccaatactgacctagtatgggggagggagtaacccttcgttccactataata-atgagtaactttacaaaggtatattaaaaggt 7768730  T
Q  151 tacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaa 250  Q
    ||||||||| | |||||||| |||||||||| |||||| || ||| |   ||||||| ||||||||||||||||||| |||| | | |||||| | ||||    
T  7768729 tacaagaattagtcttcaaacctaattctactcaaagt-tccaattttagcccgtgagcaagagactcaatcctaatagtgt-tttccaaggtgaatcaa 7768632  T
Q  251 tcctaaccctag--tatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||  |||| |||  | ||||||||||||| |||| |||||||||| |||||||  |||||||||||||    
T  7768631 tctcaaccttagtttgtttgttgccaagagaattctctacaaaccttagttttgatgttggcttctaa 7768564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 23633642 - 23633450
Alignment:
Q  122 gagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaa 220  Q
    |||||||||||||||| ||| |||  ||||||||||||| | |||||    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23633642 gagtaactttacaaagagatatcatcgggttacaagaataagtcttccgc-ctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaa 23633545  T
Q  221 tcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||| ||||   |||  ||| | |||| || ||||||||| |||||||||||||  |||   | |||||||||||||||| ||||||||||||||    
T  23633544 tcctaatagtgt---ttcccggtaaatcaaccccaaccctagtgtttgttgccaagagcaaacactatacaaaccctagttttcttgttggcttctaa 23633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 300
Target Start/End: Complemental strand, 25635605 - 25635391
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag--gatttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| ||| ||||||| ||| |||||  | |||||||||||||||   ||| |||| ||||||||||||| | |||||    ||||||||||||    
T  25635605 ggggagagagcaaccctctgtttcaccataatg-atgagtaactttacaaaatagatatcaatgggttacaagaataagtcttccgc-ctaattctaccc 25635508  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaat 281  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| |||| |   |||||| |  |||||| ||||||||| |||||||||||||  |||     
T  25635507 aaagtctc-aatctcttcccgtgaccaagagactaaatcctaatagtgt-ttcccaaggtgaaccaatcccaaccctagtgtttgttgccaagagcaaac 25635410  T
Q  282 tatctacaaaccctagttt 300  Q
    ||| |||||||||||||||    
T  25635409 tatatacaaaccctagttt 25635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 316
Target Start/End: Complemental strand, 23637161 - 23637017
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| |||| |  ||||||| | |||| || ||||||||| |||||||    
T  23637161 ctaattctacccaaagtc-ctaatatcttcccatgaacaagagactcaatcctaatagtgt-ttctcaaggtaaatcaacccaaaccctagtgtttgttg 23637064  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||  | | | | |||||||||||||||| ||||||||||||||    
T  23637063 ccaagagcagactctatacaaaccctagttttcttgttggcttctaa 23637017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 46966645 - 46966816
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaa 145  Q
    ||||||||||  || |||| |||||||   ||||||| ||||||||| | | |||||||||||||||||||  | ||||  |||||||||| ||| ||||    
T  46966645 aatttgtttatccaattcagtccaatattgacctactctggggagagggcagctctctgttccactataatg-atgagtttctttacaaagagatatcaa 46966743  T
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc 218  Q
    | |||||||| ||| | |||||||| |||||||||||||||||| ||||| | || |||||| ||||||||||    
T  46966744 atggttacaataattagtcttcaaacctaattctacccaaagtcccgaatctttttccgtgagcaagagactc 46966816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 232
Target Start/End: Complemental strand, 11066850 - 11066670
Alignment:
Q  49 tttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagg 148  Q
    ||||||||| ||||||  | ||||||  ||||||| |||  |||||| | |||| ||||||||||||||  | |||||||| ||||||  ||| |||| |    
T  11066850 tttgtttacccagttcggttcaatactgacctactctgga-agagagcagctctatgttccactataatg-atgagtaactatacaaaacattccaaatg 11066753  T
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
     |||||||||||| | |||||| |||||||||||||||||| ||||| ||||||||||| ||| ||| ||||||||||| ||||    
T  11066752 tttacaagaatcagt-ttcaaacctaattctacccaaagtcccgaatctcttcccgtgatcaaaagattcaatcctaatagtgt 11066670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 86 - 263
Target Start/End: Original strand, 1620495 - 1620670
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | | ||| |||||||||||||  | |||||| ||||||||| ||| |||||||||||||||||  |  ||||||| |||||||||||||    
T  1620495 ggggagagagcagccctccgttccactataatg-atgagtaagtttacaaagagatatcaaagggttacaagaactagccttcaaacctaattctaccca 1620593  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagt 263  Q
    ||||| | ||| ||||||||||||||| ||||  ||||||||| |||| | | |||||| | ||||||| |||||||||    
T  1620594 aagtc-ccaatctcttcccgtgaccaaaagacctaatcctaatagtgt-tttccaaggtgaatcaatcccaaccctagt 1620670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 29914052 - 29914223
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  29914052 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 29914149  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  |||||||||||| ||||| |||| |||||||||||| | |||||||||||||    
T  29914150 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgaatgttggcttctaa 29914223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 14634510 - 14634621
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | ||||||| |||||||||||| |||||||| ||||| |||||||||||||| ||| ||||| |||||| ||||||| ||    
T  14634510 gagtaactttacaaaagagatatcaaaggtttacaagaatcagtcttcaaacctaatgctacccaaagtctc-aatctcttctcgtgactaagagacaca 14634608  T
Q  220 atcctaatggtgt 232  Q
    |||||||| ||||    
T  14634609 atcctaatagtgt 14634621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 316
Target Start/End: Complemental strand, 1674111 - 1673966
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgtt 270  Q
    |||| |||||||||||||| | ||| ||||||||||| ||||||||||||||||||| |||| |   || ||| | ||||||||||||||||| ||||||    
T  1674111 tctatttctacccaaagtccc-aatctcttcccgtgatcaagagactcaatcctaatagtgt-ttcccatggtgaatcaatcctaaccctagtgtttgtt 1674014  T
Q  271 gccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||||  ||| ||| ||||||| |||||||| |||||  |||||||    
T  1674013 gccaagagcaaactatatacaaacactagttttcttgttaacttctaa 1673966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 322
Target Start/End: Complemental strand, 13420069 - 13419869
Alignment:
Q  122 gagtaactttacaaag-gatttcaaagg-gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    |||||||||||||||| ||| |||||   ||||||| ||| | ||||| || | ||||||||||||| | | |||| |||| ||||||||||||||||      
T  13420069 gagtaactttacaaagagatatcaaaaatgttacaaaaattattcttccaaccaaattctacccaaaattt-gaatctctttccgtgaccaagagacttg 13419971  T
Q  220 atcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcc 319  Q
    |||||||| |||| |   |||||| | ||||||| ||||||||| |||||||||||||  |   |||||||||||||||||| |||||||||| ||| ||    
T  13419970 atcctaatagtgtttcc-caaggtgaatcaatcccaaccctagtgtttgttgccaagagcaaactctacaaaccctagttttcttgttggcttttaaacc 13419872  T
Q  320 ttt 322  Q
    |||    
T  13419871 ttt 13419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 47882981 - 47883152
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  47882981 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 47883078  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||| ||||  |||||||||||| |||||||||| ||||||||||||   |||||||||||||    
T  47883079 caaaacaatcccaaccatagt-gttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaa 47883152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13420305 - 13420364
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  13420305 ctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaatagtgt 13420364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 26763154 - 26763045
Alignment:
Q  122 gagtaactttacaaag-gatttc---aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagact 217  Q
    |||||||||||||||| ||| ||   |||||||||||| ||| || ||||||| |||||||||||| ||||||||||| ||||||| | |||||||||||    
T  26763154 gagtaactttacaaagagatatcaaaaaagggttacaataattaaacttcaaacctaattctacccgaagtctcgaatttcttcccataaccaagagact 26763055  T
Q  218 caatcctaat 227  Q
      ||||||||    
T  26763054 ttatcctaat 26763045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 31151483 - 31151347
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||| | ||| | ||||||||||||||||||||||||||||| |||| |   |||||| | |||| || |||||| || |||||||    
T  31151483 ctaattctacccaaagtccc-aatcttttcccgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccccaaccctggtgtttgttg 31151386  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttg 308  Q
    ||||||  ||| | | |||||||||||||||| ||||||    
T  31151385 ccaagagcaaactctatacaaaccctagttttcttgttg 31151347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 27762085 - 27762161
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | ||  |||||||||||||||||||||||||||||||    
T  27762085 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-aacctcttcccgtgaccaagagactcaatcctaat 27762161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 28761548 - 28761686
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    ||||||||||| |||||||| |||||||||| || ||||||||||||||||||||| |||| | | |||||| | ||||  ||  |||||| || |||||    
T  28761548 ctaattctacctaaagtctc-aatatcttcctgtaaccaagagactcaatcctaatagtgt-tttccaaggtgaatcaactctcaaacccttgtgtttgt 28761645  T
Q  270 tgccaaga--aaattatctacaaaccctagttttattgttg 308  Q
    ||||||||  ||| ||| |||||||||||||||| ||||||    
T  28761646 tgccaagagcaaactatatacaaaccctagttttgttgttg 28761686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 47878270 - 47878425
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  47878270 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 47878367  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  47878368 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 47878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 54193309 - 54193153
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  54193309 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 54193212  T
Q  248 ------caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
          |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  54193211 caaaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 54193153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 324
Target Start/End: Original strand, 10595133 - 10595312
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    |||| |||||||| |||||||| |||||||||||||| ||||| |   ||||||||||||||||||||| ||||||||| ||| | |||||| ||| | |    
T  10595133 gttataagaatcagtcttcaaacctaattctacccaa-gtctc-agcctcttcccgtgaccaagagacttaatcctaatagtgctttgttcatggtgaat 10595230  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatccttttt 324  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||| |||||| |||||||    
T  10595231 caaaacaatccaaaccctagt-gttgttgccaagataaattctctataaaccctagtttgtatgttggtttctaaaccttttt 10595312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 10897088 - 10896933
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||| ||||| | |   ||||||||||||||||||| ||||||||||| ||| | |||||||||| | |    
T  10897088 gttacaagaatcagtcttcaaacctaattctaccc-aagtc-ccagcctcttcccgtgaccaagagaatcaatcctaatagtgctttgttcaaggtgaat 10896991  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  10896990 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 10896933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 27703195 - 27703331
Alignment:
Q  77 acctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatcta 174  Q
    ||||||||||||| |||||| |  ||||| ||||||||||||| | ||||  |||||||||| ||| |||||| ||||||| ||||||| |||||| |||    
T  27703195 acctactatgggggagagagcatgtctcttttccactataatt-atgagtttctttacaaagagatatcaaagagttacaaaaatcaat-ttcaaaccta 27703292  T
Q  175 attctacccaaagtctcgaatatcttcccgtgaccaaga 213  Q
    ||||||  |||||||  |||| ||| |||||||||||||    
T  27703293 attctattcaaagtcctgaatctctccccgtgaccaaga 27703331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 561896 - 561955
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||| ||||    
T  561896 ctaattctacccaaagtctc-aatctcttcacgtgaccaagagactaaatcctaatagtgt 561955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 4535697 - 4535616
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| |||||||| ||||||||||||||  |  | ||  ||||||||| |||||||||||||||||||| |||||    
T  4535697 gttacaagaatcagtcttcaaacctaattctacccaa--ttcccaacctcttcccgtaaccaagagactcaatcctaacggtgt 4535616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6561948 - 6561889
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  6561948 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 6561889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 11073132 - 11073033
Alignment:
Q  122 gagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaat 221  Q
    |||||||||||||||  ||| |||| | |||||||||||| | || ||  ||||||||||| |||||| | ||| ||||| |||||||||||||||||||    
T  11073132 gagtaactttacaaaacattccaaatgtttacaagaatcagttttgaac-ctaattctacctaaagtcccaaatctcttctcgtgaccaagagactcaat 11073034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 17795447 - 17795342
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||| ||||||||||||| | |||||    |||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  17795447 gagtaactttacaaaagagatatcaatgggttacaagaataagtcttccgc-ctaattctacccaaagcctc-aatctctttccgtgaccaagagactca 17795350  T
Q  220 atcctaat 227  Q
    ||||||||    
T  17795349 atcctaat 17795342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18162801 - 18162742
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  18162801 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 18162742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 19103887 - 19103782
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | |||| ||||||||||||| | |||||    |||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  19103887 gagtaactttacaaaagagatatcaatgggttacaagaataagtcttccgc-ctaattctacccaaagcctc-aatctctttccgtgaccaagagactca 19103790  T
Q  220 atcctaat 227  Q
    ||||||||    
T  19103789 atcctaat 19103782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 31021295 - 31021407
Alignment:
Q  204 gtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttat 303  Q
    |||| ||||||||||||||||||| |||| | | |||||| | ||||||| ||||||||| ||||||| | ||   |   |||||||||||||||||||     
T  31021295 gtgatcaagagactcaatcctaatagtgtttctccaaggtgaatcaatcccaaccctagtgtttgttgactagggcaaactctacaaaccctagttttag 31021394  T
Q  304 tgttggcttctaa 316  Q
     ||||||||||||    
T  31021395 ggttggcttctaa 31021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 38890178 - 38890119
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  38890178 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 38890119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39715607 - 39715548
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  39715607 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 39715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 7418218 - 7418066
Alignment:
Q  77 acctactatggggagagagtaactctctgttccactataatt-tacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatcta 174  Q
    ||||||||||||||||||| | |||||||||||||| ||||  || ||||  |||||||||| ||| |  |   | ||||||||||| |||||||| |||    
T  7418218 acctactatggggagagagcagctctctgttccactctaatgatatgagtttctttacaaagagatattga---gatacaagaatcagtcttcaaaccta 7418122  T
Q  175 attctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | |||| |||| ||| | ||| ||||||||||||||| |||||||||| |||||||||    
T  7418121 actctagccaa-gtccc-aatctcttcccgtgaccaatagactcaatcataatggtgt 7418066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 10094177 - 10094254
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  10094177 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 10094254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 10201057 - 10201134
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  10201057 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 10201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 24177383 - 24177278
Alignment:
Q  204 gtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaattatctacaaaccctagtttt 301  Q
    |||||||||||||||||||||||| |||| | | |||||| | |||| || |||| |||| |||||||||||||  ||| | | ||||||||||||||||    
T  24177383 gtgaccaagagactcaatcctaatagtgt-tttccaaggtgaatcaaccccaaccttagtgtttgttgccaagagcaaactctatacaaaccctagtttt 24177285  T
Q  302 attgttg 308  Q
     ||||||    
T  24177284 cttgttg 24177278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 24979845 - 24979791
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||    
T  24979845 ctaattctacccaaagtctc-aatctctttccgtaaccaagagactcaatcctaat 24979791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 27544352 - 27544275
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| || || |   ||||||||||||||||||||||||||||||| ||||    
T  27544352 caagaatcagtcttcaaacctaattctacccaa-gt-tccacgctcttcccgtgaccaagagactcaatcctaatagtgt 27544275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 38002952 - 38002871
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| ||||||||  ||||||||||||| ||| | |   |||||||||||||||||||||||| |||||||||||    
T  38002952 gttacaagaatcagtcttcaaacttaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaaacctaatggtgt 38002871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 53915615 - 53915669
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||    
T  53915615 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaat 53915669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 54188592 - 54188499
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||| ||||| | |   ||||||||||||||||||||||||| ||||| ||| | ||||||||||    
T  54188592 gttacaagaatcagtcttcaaacctaattctaccc-aagtc-ccagcctcttcccgtgaccaagagactcaattctaatagtgctttgttcaaggt 54188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 10949359 - 10949435
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||||||| |||||||| ||||||| |||||| || || |   |||||||||||||||||||||||||||||||    
T  10949359 gttacaagaatcagtcttcaaacctaattcaacccaa-gt-tccagcctcttcccgtgaccaagagactcaatcctaat 10949435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 11007634 - 11007683
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatc 222  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  11007634 ctaattctacccaaagtctc-aatctcttcctgtgaccaagagactcaatc 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 321
Target Start/End: Complemental strand, 16996953 - 16996782
Alignment:
Q  154 aagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttattcaa-- 250  Q
    |||||| | |||||||| ||||||||||||||| || | ||| |||| |||||||||||||||||||||||||  ||| | | ||| |||| | ||||      
T  16996953 aagaattagtcttcaaacctaattctacccaaa-tccc-aatttctttccgtgaccaagagactcaatcctaacagtgttttattctaggtgaatcaaaa 16996856  T
Q  251 ---tcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
       | | ||||||||| ||| || |||||| |||| |||| ||||||||||||  |||||||||||||| ||||    
T  16996855 catttccaaccctagtgtttattaccaagagaattctctataaaccctagtttgtttgttggcttctaaacctt 16996782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 38210509 - 38210449
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  38210509 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 38210449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 42297754 - 42297807
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaat 195  Q
    |||||||||||||||||||| |||||||| |||||||||| |||| || |||||    
T  42297754 tcaaagggttacaagaatcagtcttcaaacctaattctacacaaaatcccgaat 42297807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 1313547 - 1313488
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| || |||||||||||||||||| ||||    
T  1313547 ctaattctacccaaagtccc-aatctcttcccgtaactaagagactcaatcctaatagtgt 1313488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3859666 - 3859607
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  3859666 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 3859607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4308400 - 4308459
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||| ||||    
T  4308400 ctaattctacccaaagtccc-aacctcttcccgtaaccaagagactcaatcctaatagtgt 4308459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4666652 - 4666593
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||||||| |||| ||||    
T  4666652 ctaattctacccaaagtctc-aatctcttcccgtaacctagagactcaatcataatagtgt 4666593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5926883 - 5926942
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  5926883 ctaattctaccaaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 5926942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9604726 - 9604785
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||  |||| |||| ||||||||||||||||||||| ||||    
T  9604726 ctaattctacccaaagtctc-aacctctttccgtaaccaagagactcaatcctaatagtgt 9604785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12268083 - 12268142
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  12268083 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 12268142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28181160 - 28181101
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| | ||| ||||||||| ||||| ||||||||||||||||||||    
T  28181160 ctaattctatccaaagtccc-aatctcttcccgtaaccaatagactcaatcctaatggtgt 28181101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 43423582 - 43423641
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  43423582 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 43423641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 45883077 - 45883018
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||| ||||    
T  45883077 ctaattctacccaaagtccc-aacctcttcccgtaaccaagagactcaatcctaatagtgt 45883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 53917783 - 53917842
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| || | ||| ||||||||| ||||||||||||||||||||| ||||    
T  53917783 ctaattctacccaaaatccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 53917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 1626803 - 1626861
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| | ||| ||| ||||| ||||||||||||||||||||| ||||    
T  1626803 taattctacccaaagtccc-aatctctccccgtaaccaagagactcaatcctaatagtgt 1626861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 5858627 - 5858474
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||| ||||| | |   ||||||||||||||  ||||||||||||||| ||| | |||||||||| | |    
T  5858627 gttacaagaatcagtcttcaaacctaattctaccc-aagtc-ccagcctcttcccgtgacca--agactcaatcctaatagtgttttgttcaaggtgaat 5858532  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  5858531 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 5858474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 6303347 - 6303312
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6303347 tcttcccgtgaccaagagactcaatcctaatagtgt 6303312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 10100236 - 10100271
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10100236 tcttcccgtgaccaagagactcaatcctaatagtgt 10100271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 10956146 - 10956200
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||| |   ||||||||| |||||||||||||||||||||    
T  10956146 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaat 10956200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 16462240 - 16462205
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16462240 tcttcccgtgaccaagagactcaatcctaatagtgt 16462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 20031463 - 20031510
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  20031463 tcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 20031510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 22626129 - 22626164
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22626129 tcttcccgtgaccaagagactcaatcctaatagtgt 22626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 23941772 - 23941671
Alignment:
Q  284 tctacaaaccctagttttattgttggcttctaatcc--tttttctactcttt--ctttcatcttatac-----aagatctgaatttatagagaaatataa 374  Q
    |||||||||||||||||| |||||||||||||| ||  |||||||||||| |   |||||||| ||||     |||||||| ||||||||| ||||||||    
T  23941772 tctacaaaccctagttttgttgttggcttctaaacccgtttttctactctctacttttcatctgatacaagataagatctgtatttatagaaaaatataa 23941673  T
Q  375 cc 376  Q
    ||    
T  23941672 cc 23941671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 28102121 - 28102175
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||||||||||    
T  28102121 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaat 28102175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 36012035 - 36011906
Alignment:
Q  101 ctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatc 198  Q
    |||||||||||||||  | | ||||||| ||||||| ||  | |||| ||||||||||||| | ||| | || |||||||||||||||||| | ||| ||    
T  36012035 ctctgttccactata--tgatgagtaacgttacaaaagagatatcaatgggttacaagaataagtctcccaa-ctaattctacccaaagtcac-aatctc 36011940  T
Q  199 ttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||| ||||||| | ||||||||||| ||||    
T  36011939 ttcccgtaaccaagatattcaatcctaatagtgt 36011906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 456046 - 455986
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  456046 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 458423 - 458363
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  458423 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 746896 - 746836
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  746896 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 746836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6063564 - 6063624
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  6063564 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 6063624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6065914 - 6065974
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  6065914 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 6065974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 10621648 - 10621708
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  10621648 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 10621708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 15771343 - 15771384
Alignment:
Q  335 tttcatcttatacaagatctgaatttatagagaaatataacc 376  Q
    |||||| | ||||| |||||||||||||||||||||||||||    
T  15771343 tttcatttgatacaggatctgaatttatagagaaatataacc 15771384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 15823725 - 15823778
Alignment:
Q  128 ctttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattcta 180  Q
    |||||||||| ||| |||||||||||||||||| | |||||||| |||||||||    
T  15823725 ctttacaaagagatgtcaaagggttacaagaattagtcttcaaacctaattcta 15823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25389044 - 25388984
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  25389044 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 25388984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 28413150 - 28413210
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagac-tcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||| ||||||||||| ||||    
T  28413150 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagacttcaatcctaatagtgt 28413210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35777560 - 35777500
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  35777560 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 35777500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3306899 - 3306840
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||  ||| |||||||| | || ||||||||||||||||||||| ||||    
T  3306899 ctaattctacccaaaa-ctccaatatctttctgtaaccaagagactcaatcctaatagtgt 3306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 5886337 - 5886278
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||| |||||| ||||    
T  5886337 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaaccctaatagtgt 5886278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25533580 - 25533521
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||| ||||||||||||||| ||||    
T  25533580 ctaattctacccaaagtctc-agcctcttcccgtaaccaaaagactcaatcctaatagtgt 25533521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27101300 - 27101359
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | |||||| || ||||||||||||||||||||| ||||    
T  27101300 ctaattctacccaaagtccc-attctcttcctgtaaccaagagactcaatcctaatagtgt 27101359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 27703470 - 27703510
Alignment:
Q  338 catcttatacaagatctgaatttatagagaaatataaccct 378  Q
    ||||| |||||||||||| |||||||| |||||||||||||    
T  27703470 catctaatacaagatctgtatttatagtgaaatataaccct 27703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 47149014 - 47149073
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||||| |||| ||||    
T  47149014 ctaattctacccaaagaccc-aatctcttcccgtaaccaagagactcaatcataatagtgt 47149073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 51727126 - 51727185
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   |||| |||| ||||||||||||||||||||| ||||    
T  51727126 ctaattctacccaaagtctc-agcctcttaccgtaaccaagagactcaatcctaatagtgt 51727185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 316
Target Start/End: Complemental strand, 6049120 - 6048895
Alignment:
Q  92 agagtaactctctgttccactata-atttacgagtaactttacaaagg-atttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtc 189  Q
    |||| ||||||| ||||||||||| | | | ||||||||||||||||| || ||||||||||| ||||||   |||||||| ||||||||| ||||||||    
T  6049120 agagcaactctccgttccactatataatgatgagtaactttacaaagggatatcaaagggttataagaatacgtcttcaaacctaattctatccaaagtc 6049021  T
Q  190 tcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctaca 289  Q
    || ||||||||| ||||||||||||| ||||||||||| |||| | |||||||| | ||||||| || |||||| ||||||||||||| |||| | ||||    
T  6049020 tc-aatatcttctcgtgaccaagagattcaatcctaatagtgtttcttcaaggtgaatcaatcccaaacctagtgtttgttgccaagagaattctttaca 6048922  T
Q  290 aaccctagttttattgttggcttctaa 316  Q
    ||||||||||||  |||||||||||||    
T  6048921 aaccctagttttgatgttggcttctaa 6048895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 301
Target Start/End: Complemental strand, 26210836 - 26210581
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataatttacgagtaactttacaaag--gatttc 143  Q
    ||||||||||| ||||||| |||||||| ||||||||   |||||||||| | ||||| |||| | ||||||  | |||||||||| ||||   |  |      
T  26210836 aatttgtttacccagttcagtccaatactaacctactccaggggagagagaagctctccgttctattataatg-atgagtaactttccaaacatgtatca 26210738  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||| ||||| |||| |||| ||||||||||||||||||||| || | | | ||||||    
T  26210737 aaagggttacaagaatcagtcttcaaacctaattctaccgaaagtcccgaatctctttccgttaccaagagactcaatcctaatagtatttctccaaggt 26210638  T
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagtttt 301  Q
     | ||||||  |||||||||  |||||||||||| |||| ||||||||||||||||||    
T  26210637 gaatcaatcacaaccctagt-gttgttgccaagagaattctctacaaaccctagtttt 26210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 16297118 - 16297205
Alignment:
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  16297118 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaatagtgt 16297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 47 - 300
Target Start/End: Original strand, 13290470 - 13290723
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatg-gggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttca 144  Q
    ||||||||||| ||||||  ||||||||  ||| | | || ||||||| ||| ||||||||||| |||||||  | |||||||||||||||| ||| |||    
T  13290470 aatttgtttacccagttcggtccaatactgaccaagtctgagggagagtgtagctctctgttccgctataatg-atgagtaactttacaaagagatatca 13290568  T
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggtt 244  Q
    || |||||||||||| | |||||||| ||||||||||||| ||| || |||||||||| |||||||||||||| ||| ||||| |||| | |  |||||     
T  13290569 aaaggttacaagaattattcttcaaacctaattctacccagagt-tctaatatcttcctgtgaccaagagactaaattctaatagtgtttctcgaaggtg 13290667  T
Q  245 attcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttt 300  Q
    | ||| ||| || |||||| ||||||||||||| ||   |||||||||||||||||    
T  13290668 aatcactcccaagcctagtgtttgttgccaagagaaaactctacaaaccctagttt 13290723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 11081702 - 11081532
Alignment:
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||||||||||||| | |||||||| |||||| ||| |||| || | ||| ||||||||||| ||||||||||||||||||| |||| |   ||| ||    
T  11081702 aaagggttacaagaattagtcttcaaacctaattttacacaaaatc-ctaatctcttcccgtgatcaagagactcaatcctaatagtgtttcc-caaagt 11081605  T
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | ||||||  ||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  11081604 gaatcaatctcaaccctagtgtttgttgccaagagaattctctacaaaccctagttttgttgttggcttctaa 11081532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 12310119 - 12310236
Alignment:
Q  155 agaatcaatcttcaaatctaattctacccaaagtctcgaa-tatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcc 253  Q
    ||||||| ||||||||  ||||| |||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| |||||||||| | |||||||    
T  12310119 agaatcagtcttcaaacataattatacccaaagt-tcgaaatctcttcccgtgaccaagagactcaatcctaatagtgtttgttcaaggtgaatcaatcc 12310217  T
Q  254 taaccctagtatttgttgc 272  Q
     ||||||||| ||||||||    
T  12310218 caaccctagtgtttgttgc 12310236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 376
Target Start/End: Complemental strand, 8260693 - 8260435
Alignment:
Q  125 taactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcct 224  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| | |||||||  |||| ||   ||| ||||||||||||||||| ||||||||||    
T  8260693 taactttataaaggatttcaaagggctacaagaatcaatcttcaaacccaattctatacaaaatccaaaatctcttcccgtgaccaagacactcaatcct 8260594  T
Q  225 aatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctag--ttttattgttggcttctaatcc--- 319  Q
    ||| | || | | |||||    | ||||| |||||| || |||||| |||| | |  | ||||||||||||||  |||| |||||||| ||||||||       
T  8260593 aatagggtttatacaagg----tgaatcccaaccctcgtgtttgtttccaacagagatctctacaaaccctagtttttttttgttggcatctaatccttg 8260498  T
Q  320 tttttctactct------ttctttcatcttatacaagatctgaatttatagagaaatataacc 376  Q
    ||||||||||||       | |||||||| ||||| ||| |||||||||||||||||| ||||    
T  8260497 tttttctactctctacacctttttcatctgatacatgatttgaatttatagagaaataaaacc 8260435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 309
Target Start/End: Complemental strand, 11084543 - 11084408
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||| |||||||||| |||||| ||||| ||||||||||||||||||||||||| |||| |   |||||| | ||||||  ||||||| | |||||||    
T  11084543 ctaattttacccaaagt-tcgaatctcttctcgtgaccaagagactcaatcctaatagtgtttcc-caaggtaaatcaatctcaaccctattgtttgttg 11084446  T
Q  272 ccaagaaaattatctacaaaccctagttttattgttgg 309  Q
    |||||| |||| |||||||||||||||||| |||||||    
T  11084445 ccaagagaattttctacaaaccctagttttcttgttgg 11084408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 2990627 - 2990822
Alignment:
Q  49 tttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttac-gagtaactttacaaaggatttcaaa 146  Q
    ||||||||| ||||||  ||||||||| ||||||| ||||| || ||| ||||||| |||| ||| ||||||   ||||||||||||||| |||| ||||    
T  2990627 tttgtttacccagttcggtccaataccgacctactctgggggagggagcaactctccgttctactctaattttttgagtaactttacaaaagattccaaa 2990726  T
Q  147 gggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||| ||||||||||  ||||||| ||| ||||| ||||| || ||||| |||||  |||||||||| ||||||||||||  |||| | ||||||||    
T  2990727 gggtgacaagaatcaggcttcaaacctatttcta-ccaaaatcccgaatctcttcatgtgaccaagatactcaatcctaacagtgtttattcaaggt 2990822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 316
Target Start/End: Complemental strand, 7188706 - 7188563
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgc 272  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| |||| | | |||||| | |||| || ||||||||| ||||||||    
T  7188706 taattctacccaaagtctc-aatctattcccgtgaccaagagactcaatcctaatagtgt-tttccaaggtgaatcaaccccaaccctagtgtttgttgc 7188609  T
Q  273 caaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||  |||   | ||||||||||| ||||||||||| |||||||    
T  7188608 caagagcaaaccctatacaaaccctatttttattgttgacttctaa 7188563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 316
Target Start/End: Original strand, 6067193 - 6067471
Alignment:
Q  45 agaatttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaacttt-acaaag-gatt 141  Q
    ||||||||||||| |||| |  ||||||||  ||||| ||||||| |||||| | ||||| ||| |||||||||  ||||||  |||| |||||| |||     
T  6067193 agaatttgtttacccagtccggtccaatactgacctagtatgggggagagagcagctctccgtttcactataatg-acgagttccttttacaaagagata 6067291  T
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaa 240  Q
    ||| ||| |||||||||| | |||||||| ||||||||| | |||||||| ||| ||||||||||||||||||||| |||||||    || | |||||||    
T  6067292 tcagaggattacaagaattagtcttcaaacctaattctatc-aaagtctc-aatctcttcccgtgaccaagagactaaatcctatcaatgttttgttcaa 6067389  T
Q  241 ggttatt------caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||| | |      |||||| ||||||||| |||||| |||||| |||| |||| ||||||||||||  ||||||||||||||    
T  6067390 ggtgaatcaaaaacaatcccaaccctagtgtttgttaccaagagaattctctataaaccctagtttgtttgttggcttctaa 6067471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 40281469 - 40281558
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | |||||||| ||||||| ||| |||||||| ||| ||||||||||||||| |||||||||||||| |||||    
T  40281469 tcaaagggttacaagaataagtcttcaaacctaattccaccaaaagtctc-aatctcttcccgtgaccaacagactcaatcctaacggtgt 40281558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 25410213 - 25410042
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  25410213 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 25410116  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  25410115 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 25410042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 30247053 - 30246882
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||  |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  30247053 gttacaagaatcggtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 30246956  T
Q  248 caa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||     ||| |||| |||| || |||||||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  30246955 caaaacaatcccaaccgtagtgtt-gttgccaagagaaattctctataaaccctagttttgttgttggcttctaa 30246882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 24817475 - 24817529
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  24817475 ctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaat 24817529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 321
Target Start/End: Original strand, 44143965 - 44144141
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||| || |||||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  44143965 gttacaagaatcagtcttcaaacctaattctgcc-aaagtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 44144062  T
Q  248 -----caatcctaaccctagtatttgttgccaag-aaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
         ||||| ||||||||||  ||||||||||| |||||| |||| ||||||||||||   ||||||||||||| ||||    
T  44144063 caaaacaatcataaccctagt-gttgttgccaagaaaaattctctataaaccctagtttgtatgttggcttctaaacctt 44144141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 6332455 - 6332328
Alignment:
Q  105 gttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcc 202  Q
    |||||||||||||  | ||||||||||||||| ||  | | |||||||||||||||| | |||||||  ||||||||||| |||||||| ||| |||||     
T  6332455 gttccactataatg-atgagtaactttacaaaagagatattaaagggttacaagaataagtcttcaagcctaattctacctaaagtctc-aatctcttct 6332358  T
Q  203 cgtgaccaagagactcaatcctaatggtgt 232  Q
     ||||||||||||||||||| |||| ||||    
T  6332357 tgtgaccaagagactcaatcttaatagtgt 6332328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 25351436 - 25351265
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  25351436 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 25351339  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  25351338 caaaacaatctcaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 25351265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 25357130 - 25356959
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  25357130 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 25357033  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  25357032 caaaacaatctcaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 25356959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 6046712 - 6046644
Alignment:
Q  122 gagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtc 189  Q
    |||||||||||||||| ||| ||||||| |||||||||| | |||||||| ||||||||||||||||||    
T  6046712 gagtaactttacaaagagatatcaaaggtttacaagaataagtcttcaaacctaattctacccaaagtc 6046644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 9680988 - 9680929
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  9680988 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 9680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25276309 - 25276250
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  25276309 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 25276250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 2120982 - 2120901
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  2120982 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 2120901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 42006746 - 42006541
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||| ||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  42006746 gttacaaaaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 42006649  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcc---tttttctactctttctttc 338  Q
         |||||| |||||||||  || ||||||||| ||||| |||| ||||| ||||||  |||||||||||||| ||   ||||||||| | || ||||    
T  42006648 caaaacaatcccaaccctagt-gttcttgccaagagaaattttctataaaccatagtttgtttgttggcttctaaaccctgtttttctacacatt-tttc 42006551  T
Q  339 atcttataca 348  Q
    ||||||||||    
T  42006550 atcttataca 42006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 44512624 - 44512717
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  44512624 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 44512717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4296055 - 4296114
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  4296055 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 4296114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 11355426 - 11355367
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||| || ||||||||||||||||||||| ||||    
T  11355426 ctaattctacccaaagtctc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 11355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 20091666 - 20091725
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| | ||||||||| ||||    
T  20091666 ctaattctacccaaagtctc-aatctcttcccgtgaccaagagatttaatcctaatagtgt 20091725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 22828754 - 22828813
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||| ||||    
T  22828754 ctaattctacccaaagtctc-aatctcttcccataaccaagagactcaatcctaatagtgt 22828813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24258631 - 24258572
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||| ||||    
T  24258631 ctaattctatccaaagtctc-aatcttttcccgtgaccaagagactcaatcctaatagtgt 24258572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27832754 - 27832813
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||| ||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  27832754 ctaattttacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 27832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 39146108 - 39146247
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaa--tcctaaccctagtatttgt 269  Q
    ||||||||||||||||| || ||| ||||||||| |||||||||||||||| |||| |||| | | |||||| | ||||  | | ||||||||| |||||    
T  39146108 ctaattctacccaaagt-tccaatctcttcccgtaaccaagagactcaatcataatagtgt-tttccaaggtgaatcaaccttcaaaccctagtgtttgt 39146205  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttg 308  Q
    ||||||||   ||| | | |||||||||||||||| ||||||    
T  39146206 tgccaagagacaaactctatacaaaccctagttttgttgttg 39146247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 3320153 - 3320230
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  3320153 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 3320230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 3324901 - 3324978
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  3324901 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 3324978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 7069859 - 7069782
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  7069859 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 7069782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 7074866 - 7074789
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  7074866 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 7074789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 24465705 - 24465651
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||    
T  24465705 ctaattctacccaaagtccc-aatctcttcccatgaccaagagactcaatcctaat 24465651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 25405472 - 25405395
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  25405472 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 25405395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 42331118 - 42331179
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtg--accaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||| ||||    
T  42331118 ctaattctacccaaagtctc-aatctcttcccgtgtaaccaagagactcaatcctaatagtgt 42331179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 21369725 - 21369553
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    |||||| |||||| |||||||| |||||| ||||||| ||| | ||| |||| |||| ||||||||||||||||||||| ||| | |||||||||| | |    
T  21369725 gttacatgaatcagtcttcaaacctaattttacccaa-gtccc-aatctctttccgtaaccaagagactcaatcctaatagtgttttgttcaaggtgaat 21369628  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  ||||||| | ||||||||||||| || || |||| ||||||||||||   |||||||||||||    
T  21369627 caaaacaatctcaaccctaatgtttgttgccaagagaatttctctataaaccctagtttgtatgttggcttctaa 21369553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 21680280 - 21680136
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | ||||||||| |||||||  | | ||||||| ||||||| ||  | |||  ||||||||||||| ||||| |   |||||||||||||    
T  21680280 ggggagagagcagctctctgtttcactata--tgatgagtaaccttacaaaagagatatcattgggttacaagaataaatctcccg-tctaattctaccc 21680184  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||| | ||| |||||| || ||||||||||||||||||||| ||||    
T  21680183 aaagtccc-aatctcttccggtaaccaagagactcaatcctaatagtgt 21680136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 22392605 - 22392502
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgcca--agaaaattatctacaaaccc 294  Q
    ||||||||||||||||||||||||||||||| |||| |   |||||| | |||| || ||||||||| ||||||||||  || ||||| | |||||||||    
T  22392605 tcttcccgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaa-cccaaccctagtgtttgttgccaatagcaaattctatacaaaccc 22392508  T
Q  295 tagttt 300  Q
    ||||||    
T  22392507 tagttt 22392502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 34547008 - 34547117
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||||  |||||||||||| ||||| |||| |    
T  34547008 tcttcccgtgaccaagagactcaatcctaatagtgctctgttcaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagagaaattctctata 34547106  T
Q  290 aaccctagttt 300  Q
    |||||||||||    
T  34547107 aaccctagttt 34547117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 42223326 - 42223223
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    ||||||||| |||||| ||| ||| ||||||||| ||||||||||||||||||||| |||| | | |||||| | |||| |||  ||||||||| |||||    
T  42223326 ctaattctatccaaag-ctccaatctcttcccgtaaccaagagactcaatcctaatagtgt-tttccaaggtgaatcaaccctcaaaccctagtgtttgt 42223229  T
Q  270 tgccaa 275  Q
    ||||||    
T  42223228 tgccaa 42223223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 44016814 - 44016932
Alignment:
Q  205 tgaccaagagactcaatcctaatggtg-tgtgttcaaggttattcaa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctag 297  Q
    |||| |||||||||||||||||| ||| | |||||||||| | ||||     ||| ||||||||| ||||||||||||| ||||| |||| |||||||||    
T  44016814 tgactaagagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaaccctag 44016913  T
Q  298 ttttattgttggcttctaa 316  Q
    |||   |||||||||||||    
T  44016914 tttgtatgttggcttctaa 44016932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 7349393 - 7349453
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  7349393 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 7349453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9027313 - 9027373
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  9027313 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 9027373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 301
Target Start/End: Complemental strand, 21678234 - 21678102
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    ||||| |||||||||||| | ||||||||| ||| ||||||||||||||||||||| |||| |   |||||| | |||| |||  ||||||||| |||||    
T  21678234 ctaatgctacccaaagtccc-aatatcttctcgtaaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccctcaaaccctagtgtttgt 21678137  T
Q  270 tgccaaga---aaattatctacaaaccctagtttt 301  Q
    ||||||||   ||| | | ||||||||||||||||    
T  21678136 tgccaagagacaaactctatacaaaccctagtttt 21678102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 22108236 - 22108176
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  22108236 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 22108176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 22251671 - 22251723
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatccta 225  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||    
T  22251671 ctaattctacccaaagcctc-aatctcttcccgtaaccaagagactcaatccta 22251723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 314
Target Start/End: Original strand, 24813620 - 24813761
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||| | |||  |||||||| ||||||||||||||||||||| |||  |   |||||| | |||| || ||||||||| ||| |||    
T  24813620 ctaattctacccaaagtccc-aatcacttcccgtcaccaagagactcaatcctaatagtg-cttcccaaggtgaatcaa-cccaaccctagtgtttcttg 24813716  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttggcttct 314  Q
    ||||||  ||| | | |||||||||||||||| |||||| |||||    
T  24813717 ccaagagcaaactctatacaaaccctagttttcttgttgacttct 24813761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 40549996 - 40549936
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  40549996 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 40549936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 443763 - 443704
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| | ||||||||||||||||||| ||||    
T  443763 ctaattctacccaaagtccc-aatctcttcccgtaatcaagagactcaatcctaatagtgt 443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3878745 - 3878686
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  3878745 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 3878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 7470143 - 7470202
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  7470143 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 7470202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 9679227 - 9679168
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||| ||| ||||||||||||||||||||| ||||    
T  9679227 ctaattctacccaaagtccc-aatctcttcacgtaaccaagagactcaatcctaatagtgt 9679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 40836863 - 40836922
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  40836863 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 40836922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 7092333 - 7092387
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||||||||||    
T  7092333 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaat 7092387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 15541140 - 15541175
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15541140 tcttcccgtgaccaagagactcaatcctaatagtgt 15541175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 6349093 - 6349024
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataat 117  Q
    ||||||||||| |||||| ||| ||||| |||||| | ||||||||||| ||||||| |||||||| ||||    
T  6349093 aatttgtttacccagttcgatctaatactaacctagt-tggggagagagcaactctccgttccactgtaat 6349024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 1606549 - 1606489
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  1606549 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 1606489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2935437 - 2935377
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  2935437 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 2935377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 7351772 - 7351832
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  7351772 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 7351832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 12310263 - 12310300
Alignment:
Q  284 tctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  12310263 tctacaaaccctagttttgttgttgacttctaatcctt 12310300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 22137247 - 22137187
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  22137247 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 22137187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 40552274 - 40552214
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  40552274 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 40552214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 44010952 - 44011021
Alignment:
Q  248 caatcctaaccctagtatttgttgccaag-aaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||||| ||||||||| |||||||||||| |||||| |||| ||||| ||||||   |||||||||||||    
T  44010952 caatcccaaccctagtgtttgttgccaagaaaaattctctataaaccatagtttgtatgttggcttctaa 44011021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13099597 - 13099656
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||||| |||| ||||    
T  13099597 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcttaatagtgt 13099656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18345709 - 18345650
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||| ||| ||||||||||||||||||||| ||||    
T  18345709 ctaattctacccaaagtctc-agcctcttcacgtaaccaagagactcaatcctaatagtgt 18345650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 20137230 - 20137289
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| | |||||||||||||| |||| ||||    
T  20137230 ctaattctacccaaagtccc-aatctcttcccgtaatcaagagactcaatcttaatagtgt 20137289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 20297526 - 20297471
Alignment:
Q  176 ttctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  20297526 ttctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 20297471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 21990318 - 21990259
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| ||||| ||| ||| ||||||||| ||||||||||||||| ||||| ||||    
T  21990318 ctaattctactcaaagcctc-aatctcttcccgtaaccaagagactcaattctaatagtgt 21990259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24748762 - 24748703
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||  |||||||||||||||| |||| ||||    
T  24748762 ctaattctacccaaagtccc-aatctcttcccggaaccaagagactcaatcgtaatagtgt 24748703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 26804740 - 26804681
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||| ||||||||| ||||    
T  26804740 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactaaatcctaatagtgt 26804681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28487721 - 28487662
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| |||||| || ||||||||||||||||||||| ||||    
T  28487721 ctaattctacccaaagcccc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 28487662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 37412248 - 37412307
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | |||||| || ||||||||||||||||||||| ||||    
T  37412248 ctaattctacccaaagtccc-agtctcttcctgtaaccaagagactcaatcctaatagtgt 37412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 321
Target Start/End: Complemental strand, 14353208 - 14352965
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    |||||||||||  ||||  |||||||||||||  | || |||||||||||| ||||||||||||||||||||||  |  |||||| ||||||||||||||    
T  14353208 ggggagagagtggctcttcgttccactataatg-atgaataactttacaaaagatttcaaagggttacaagaat--agtttcaaacctaattctacccaa 14353112  T
Q  186 agtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaa-----------ggttattcaatcctaaccctagtatttgttgcca 274  Q
    |||||||||| |||| |||||||||||||||| ||||||||| |||| | | |||           ||| ||||||||  || |||||| ||||||||||    
T  14353111 agtctcgaatctctttccgtgaccaagagactaaatcctaatagtgtttctccaaggtgaatcaatggtgattcaatctcaaacctagtgtttgttgcca 14353012  T
Q  275 agaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    ||| || | |||||||||||||||||| |||||||||||||||||||    
T  14353011 agagaaatctctacaaaccctagttttgttgttggcttctaatcctt 14352965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 13785311 - 13785464
Alignment:
Q  90 agagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtc 189  Q
    |||||| | ||||| |||||||| ||||||  ||||||||||||||| |||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  13785311 agagagcagctctccgttccactgtaatttttgagtaactttacaaaagattccaaagggttataagaatcagtcttcaaacctaattctacccaaagtc 13785410  T
Q  190 tcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
     ||||| ||||   |||||||||| ||||||||||||| |||| |||| |||||    
T  13785411 ccgaatctctttttgtgaccaagaaactcaatcctaattgtgtttgtttaaggt 13785464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 13125495 - 13125635
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||| ||||| ||||||| |||||||||||||  | ||||||||||||||| ||  | |||||||||||||||||| | |||||||| ||||||||||||    
T  13125495 ggggggagagcaactctccgttccactataatg-atgagtaactttacaaaagagatatcaaagggttacaagaataagtcttcaaacctaattctaccc 13125593  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||| | ||| ||||||| |||||||||| |||||||||||    
T  13125594 aaagtc-ccaatctcttcccttgaccaagagcctcaatcctaa 13125635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 316
Target Start/End: Complemental strand, 28279551 - 28279280
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaaccta--ctatggggagagagtaactctctgttccactataatttacgagtaactttacaaaggattt-- 142  Q
    ||||||||||| |||||| ||| |||||  |||||  ||| ||||| |||  |||||||  ||||||||||||  | ||||||||||||||| ||  |      
T  28279551 aatttgtttacccagttcgatctaatactgacctagtctagggggaaagaacaactctcaattccactataatg-atgagtaactttacaaaagagatgc 28279453  T
Q  143 caaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaagg 242  Q
    ||| | ||||||||||| | |||||||| ||||||||||| |||||| | ||| |||||||||||||||||  |||||||||||| |||| | | |||||    
T  28279452 caatgagttacaagaattagtcttcaaacctaattctaccaaaagtccc-aatctcttcccgtgaccaagaagctcaatcctaatagtgtttctccaagg 28279354  T
Q  243 ttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
      | ||||||| ||||||||| ||||||| |||||  |   ||||||||||||| |||| || |||||||||||    
T  28279353 ggaatcaatcccaaccctagtgtttgttgtcaagagcaaactctacaaaccctaattttgttattggcttctaa 28279280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 27916705 - 27916510
Alignment:
Q  122 gagtaactttacaaag-gatttcaaag--ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactc 218  Q
    |||||||||||||||| ||| ||||||  ||||| |||||| | |||||||| ||||||| |||||||||| | ||| |||||  |||||||||||||||    
T  27916705 gagtaactttacaaagagatatcaaagaaggttaaaagaattagtcttcaaacctaattccacccaaagtcac-aatctcttcatgtgaccaagagactc 27916607  T
Q  219 aatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||| ||||| |||| | | |||||| | ||||| | ||||||||| |||||||||||||  |   |||||||||||||||||| ||| ||||||||||    
T  27916606 aattctaatagtgttt-tccaaggtgaatcaattccaaccctagtgtttgttgccaagagcaaactctacaaaccctagttttcttgctggcttctaa 27916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 26613277 - 26613423
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | |||||||||||||||||||  |  ||||||||| |||| ||  | |||||||||||||||||| | |||||||| ||||||||||||    
T  26613277 ggggagagagaagctctctgttccactataatg-attagtaactttccaaaagagatatcaaagggttacaagaataagtcttcaaacctaattctaccc 26613375  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||| ||| ||| |||||| ||||||||| |||||||||| ||| ||||    
T  26613376 aaagcctc-aatctcttcctgtgaccaagtgactcaatccgaatagtgt 26613423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 155931 - 155805
Alignment:
Q  105 gttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttccc 203  Q
    |||||||||||||  | |||||||||||||||| |||  |||| |||||||||||| | |||||||| ||||||||| |||||||| | ||| |||||||    
T  155931 gttccactataatg-atgagtaactttacaaagagataacaaaaggttacaagaattactcttcaaacctaattctatccaaagtccc-aatctcttccc 155834  T
Q  204 gtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||| ||||||||||| ||||    
T  155833 gtgaccaagagattcaatcctaatagtgt 155805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 99 - 316
Target Start/End: Complemental strand, 46783278 - 46783055
Alignment:
Q  99 ctctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatat 197  Q
    |||||||||||||||||||  | ||||  |||||||||  ||| |||||||||||||||||| | |||||||| |||||||||||||||||   |||| |    
T  46783278 ctctctgttccactataatg-atgagtttctttacaaaaagatatcaaagggttacaagaattagtcttcaaacctaattctacccaaagttctgaatct 46783180  T
Q  198 cttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttattca-----atcctaaccctagtatttgttgccaagaaaattatctacaaa 291  Q
    ||||  ||||||||||| ||| |||||||  ||| | |||||||||| | |||     |||  ||||||||| |||||||| |||| |||| |||| |||    
T  46783179 cttcatgtgaccaagagtctctatcctaacagtgctttgttcaaggtgaatcaaaacgatctcaaccctagtgtttgttgcaaagataattctctataaa 46783080  T
Q  292 ccctagttttattgttggcttctaa 316  Q
    || ||||||  ||||||||||||||    
T  46783079 ccatagtttgtttgttggcttctaa 46783055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 232
Target Start/End: Complemental strand, 16561751 - 16561565
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaaccta--ctatggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--ttt 142  Q
    ||||||||||| ||||||  ||||||||  |||||  ||||||| |||||| ||| || ||||||||| ||||  | ||||||||||||||| ||  | |    
T  16561751 aatttgtttacacagttcggtccaatactgacctagtctatggg-agagagcaaccctttgttccactgtaatg-atgagtaactttacaaaagagatat 16561654  T
Q  143 caaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| | |||||||| ||| |||||||||||||||| ||| | || ||||| |||||||||| ||||||||| ||||    
T  16561653 caaagggttacaagaataagtcttcaaacctatttctacccaaagtctc-aatctatttccgtggccaagagacttaatcctaatagtgt 16561565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 4144782 - 4144953
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    |||||||||||||||||||||| |||||||||||||| ||| | | | ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  4144782 gttacaagaatcaatcttcaaacctaattctacccaa-gtccc-agtctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 4144879  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  ||||||||| ||| ||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  4144880 caaaacaatctcaaccctagtgttt-ttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 4144953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 350
Target Start/End: Original strand, 2393381 - 2393588
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctc-gaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttat 246  Q
    ||||||||||||| ||||||||||||||||||||| ||||| | || ||  ||||||||||||||||||||||||||||| ||| | |||||||||| |     
T  2393381 gttacaagaatcagtcttcaaatctaattctaccc-aagtcccagacta--ttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaa 2393477  T
Q  247 t-----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcct--ttttctactctttctttc 338  Q
    |     |||||| |||||||||  || ||||||||| ||||| |||| ||||| ||||||   ||||||||||||| |||  ||||||||||| | ||||    
T  2393478 tcaaaacaatcccaaccctagt-gttattgccaagagaaattctctataaaccttagtttgcatgttggcttctaaaccttgttttctactctgtttttc 2393576  T
Q  339 atcttatacaag 350  Q
    |||| |||||||    
T  2393577 atctgatacaag 2393588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 15669517 - 15669620
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |   |||||| | |||| || ||||||||| |||||||    
T  15669517 ctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccccaaccctagtgtttgttg 15669614  T
Q  272 ccaaga 277  Q
    ||||||    
T  15669615 ccaaga 15669620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 316
Target Start/End: Complemental strand, 49959236 - 49959052
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag 241  Q
    ||||||||||| |||||||| | |||||| |||||| || |||||||||||||| ||||| | ||||||||||||||| ||||||| |||| | | ||||    
T  49959236 tcaaagggttaaaagaatcagt-ttcaaacctaattttatccaaagtctcgaatctcttctcatgaccaagagactcattcctaatagtgtttctccaag 49959138  T
Q  242 -----------gttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
               || ||||||| | ||||||| | |||||||||||||  ||| |||||||||| ||||||| ||||||||||||||    
T  49959137 gtgaatcaatagtgattcaattccaaccctaatgtttgttgccaagaggattctctacaaaccatagttttgttgttggcttctaa 49959052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 30738724 - 30738813
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | |||||||| ||||||||||||||| || | ||| ||||||  ||||||||||||||||||||||| ||||    
T  30738724 tcaaagggttacaagaataagtcttcaaacctaattctacccaaaatc-ccaatctcttcctatgaccaagagactcaatcctaatagtgt 30738813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 322
Target Start/End: Original strand, 18800696 - 18800846
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    ||||||||||||||||| || ||| ||| ||||||||| ||||||||||||||||| |||| |  ||| ||| | |||| || ||||||||||||||| |    
T  18800696 ctaattctacccaaagt-tcaaatctctacccgtgacctagagactcaatcctaatagtgt-ttctcagggtgaatcaaccccaaccctagtatttgtgg 18800793  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttggcttctaatccttt 322  Q
    ||||||  ||| | | |||||||| ||||||| |||||| ||||||| |||||    
T  18800794 ccaagagcaaactctatacaaaccgtagttttcttgttgacttctaaaccttt 18800846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 37990864 - 37990682
Alignment:
Q  143 caaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaa-- 240  Q
    |||||| |||||||||||  ||| |||| ||||||||||||||| | |||||| ||||| ||||| ||||||||||||| ||||| |||| | | |||      
T  37990864 caaaggattacaagaatcggtctacaaacctaattctacccaaaatttcgaatctcttctcgtgatcaagagactcaattctaatagtgtttctccaaag 37990765  T
Q  241 ---------ggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttcta 315  Q
             ||| ||||||||| ||||||||| ||||||||| ||| || | |||||||| ||||||||| |||||||||||||    
T  37990764 taaattaatggtgattcaatcc-aaccctagtgtttgttgccgagagaaatctctacaaatcctagttttgttgttggcttcta 37990682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 43104392 - 43104258
Alignment:
Q  99 ctctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaa-tcttcaaatctaattctacccaaagtctcgaat 195  Q
    ||||| |||||||||||||  | ||||||||||||||| ||  | |||||||||||||||||  || |||||||| ||||||||||||||||| || |||    
T  43104392 ctctccgttccactataatg-atgagtaactttacaaaagagatatcaaagggttacaagaaaaaaatcttcaaacctaattctacccaaagtttc-aat 43104295  T
Q  196 atcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
     |||||| |||||||| ||||||||| ||||| ||||    
T  43104294 gtcttcctgtgaccaaaagactcaattctaatagtgt 43104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 316
Target Start/End: Complemental strand, 14997122 - 14996952
Alignment:
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt- 247  Q
    |||||||||| | |||||||| |||||||||||| ||||||| ||| |||||| || ||||||||||||||||||||  ||| | |||||||||| | |     
T  14997122 ttacaagaattagtcttcaaacctaattctaccc-aagtctc-aatctcttccagtaaccaagagactcaatcctaacagtgttttgttcaaggtgaata 14997025  T
Q  248 ----caatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
        |||||| ||||||||| ||| || |||||| |||| | || ||||||||||||  ||||||||||||||    
T  14997024 aaaacaatcccaaccctagtgtttattaccaagagaattctttataaaccctagtttgtttgttggcttctaa 14996952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 21353445 - 21353616
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtg-tgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  21353445 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgcgttgttcaaggtgaat 21353542  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  ||||| |||||| ||||| |||| ||||||||||||   |||||||||||||    
T  21353543 caaaacaatcccaaccctagt-gttgttaccaagagaaattctctataaaccctagtttgtatgttggcttctaa 21353616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 38925601 - 38925660
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  38925601 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 38925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 2401320 - 2401413
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  2401320 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 2401413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 316
Target Start/End: Original strand, 8347396 - 8347540
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||||||||||| |||| |||| |  | ||||| | |||| ||||||| | || |||||||    
T  8347396 ctaattctactcaaagtctc-aatctcttcccgtgatcaagagactcaatcataatagtgtttcct-aaggtgaatcaaccctaaccttggtgtttgttg 8347493  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||  ||  | | |||||||||||||||| |||||| |||||||    
T  8347494 ccaagagcaatctctatacaaaccctagttttcttgttgacttctaa 8347540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 25134154 - 25134061
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  25134154 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgatttgttcaaggt 25134061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 42922388 - 42922334
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  42922388 ctaattctacccaaagtccc-aatctcttcccgtgaccaagagactcaatcctaat 42922334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 318
Target Start/End: Original strand, 8213582 - 8213806
Alignment:
Q  105 gttccactataatttacgagtaactttacaaaggatttcaa-agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttccc 203  Q
    |||||||||||||  | ||||||||||||||| |||| ||| ||||||||| |||| | |||||||| ||||||||| |||||||| ||||| |||| |     
T  8213582 gttccactataatg-atgagtaactttacaaaagattccaatagggttacatgaattagtcttcaaacctaattctatccaaagtcccgaatctctttct 8213680  T
Q  204 gtgaccaagagactcaatcctaatggtgtgtgt----------tcaa-ggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaac 292  Q
    |   |||| ||||| ||||||||| |||| |||          |||| ||| ||||||||  ||| ||||| ||||||| ||||| |||| ||||||||     
T  8213681 ggtgccaatagactaaatcctaatagtgtttgtctaaggtgaatcaatggtgattcaatctcaacactagtgtttgttgtcaagagaattctctacaaat 8213780  T
Q  293 cctagttttattgttggcttctaatc 318  Q
    | |||||||| || ||||||||||||    
T  8213781 cttagttttagtgctggcttctaatc 8213806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 9526545 - 9526394
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt---- 247  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |        
T  9526545 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatcaaa 9526448  T
Q  248 -caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
     |||||| |||||||| | |||||||||||| ||||| |||| ||||||||||||    
T  9526447 acaatcccaaccctag-agttgttgccaagagaaattctctataaaccctagttt 9526394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 14098092 - 14098152
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  14098092 tctaattctacccaaag-ctctaatctcttcccgtaaccaagagactcaatcctaatagtgt 14098152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6115226 - 6115285
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||||||||||| ||||    
T  6115226 ctaattctacccaaagtctc-aatctcttcatgtgaccaagagactcaatcctaatagtgt 6115285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16428811 - 16428752
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  16428811 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 16428752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 17324759 - 17324818
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  17324759 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 17324818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20291615 - 20291556
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||||||||| ||||    
T  20291615 ctaattctacccaaagtc-ctagtctcttcccgtgaccaagagactcaatcctaatagtgt 20291556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 31422996 - 31423055
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||| ||||    
T  31422996 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaattctaatagtgt 31423055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39462677 - 39462618
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  39462677 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 39462618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 50248695 - 50248754
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||||| | |||||| || ||||||||||||||||||||| ||||    
T  50248695 ctaattctacccaaagtctcga-tctcttcctgtaaccaagagactcaatcctaatagtgt 50248754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 2232676 - 2232599
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  2232676 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 2232599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 316
Target Start/End: Original strand, 3091205 - 3091377
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||| | ||||||||  ||||||||| ||| ||||| ||| |||||| || |||||||||||||||||||  |||| | |||||||||| | |    
T  3091205 gttacaagaattagtcttcaaacttaattctactcaa-gtctc-aatctcttcctgttaccaagagactcaatcctagcggtgttttgttcaaggtgaat 3091302  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  ||||||||| |||||| |||||| ||||| |||| ||||||||||||   |||||||||||||    
T  3091303 caaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccctagtttgtatgttggcttctaa 3091377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 15294928 - 15295016
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||| ||||||||||||| ||||| | |  |||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||| ||||    
T  15294928 tcaatgggttacaagaataaatctcccac-ctaattctacccaaagtccc-aacctcttcccgtaaccaagagactcaatcctaatagtgt 15295016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 9241208 - 9241348
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttg 268  Q
    ||||||||||||||||| | | ||| ||||| ||| |||||||||||||||||||||  ||| | | |||||| | |||| |||  ||||||||| ||||    
T  9241208 tctaattctacccaaagcccc-aatctcttctcgtaaccaagagactcaatcctaataatgt-tttccaaggtgaatcaaccctcaaaccctagtgtttg 9241305  T
Q  269 ttgccaaga---aaattatctacaaaccctagttttattgttg 308  Q
    |||||||||   ||| | | |||||||||||||||| ||||||    
T  9241306 ttgccaagagacaaactctatacaaaccctagttttgttgttg 9241348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9459539 - 9459599
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagac-tcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||    
T  9459539 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagacttcaatcctaatagtgt 9459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9463366 - 9463426
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagac-tcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||    
T  9463366 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagacttcaatcctaatagtgt 9463426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 14183715 - 14183818
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    ||||||||||||||| | || ||| ||||||||| |||||||||||||||  |||| |||| | | |||||| | |||| || ||||||||| |||||||    
T  14183715 ctaattctacccaaaat-tctaatctcttcccgtaaccaagagactcaattataatagtgt-tttccaaggtgaatcaaccccaaccctagtgtttgttg 14183812  T
Q  272 ccaaga 277  Q
    ||||||    
T  14183813 ccaaga 14183818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 17186250 - 17186302
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcct 224  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||||||||||||    
T  17186250 tctaattctacccaaagt-tcaaatctcttcccgtaaccaagagactcaatcct 17186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 20566954 - 20566999
Alignment:
Q  340 tcttatacaagatctgaatttatagagaaatataaccctcagaata 385  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||    
T  20566954 tcttatacaggatctgtatttatagagaaatataaccctcaaaata 20566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2510447 - 2510506
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||| ||||||||||||||| ||||    
T  2510447 ctaattctacccaaagtc-caaatctcttcccgtaaccaaaagactcaatcctaatagtgt 2510506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 10399951 - 10400010
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  10399951 ctaattctaccgaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 10400010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12302628 - 12302687
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  12302628 ctaattctacctaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 12302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13215239 - 13215180
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||||| |||| ||||    
T  13215239 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcataatagtgt 13215180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18307267 - 18307208
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  18307267 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 18307208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18839745 - 18839686
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| | | ||||| ||| ||||||||||||||||||||| ||||    
T  18839745 ctaattctacccaaagtctc-attctcttctcgtaaccaagagactcaatcctaatagtgt 18839686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25128030 - 25127971
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||||||||||||| ||| ||||    
T  25128030 ctaattctaccaaaagtctc-aatctcttcccgtaaccaagagactcaatccaaatagtgt 25127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 25251398 - 25251457
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||    
T  25251398 ctaattctacccaaagtccc-aatctcttcccgtaaccgagagactcaatcctaatagtgt 25251457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39932231 - 39932172
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| | | ||||||||| ||||||||| ||||||||||| ||||    
T  39932231 ctaattctacccaaagtctc-agtctcttcccgtaaccaagagattcaatcctaatagtgt 39932172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41647078 - 41647019
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||    
T  41647078 ctaattctacccaaagtcgc-aatctcttcccgtaaccaagtgactcaatcctaatagtgt 41647019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 47906428 - 47906369
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  47906428 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 47906369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 50076795 - 50076854
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| || | ||| ||||||||| ||||||||||||||||||||| ||||    
T  50076795 ctaattctacccaaattccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 50076854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 50078944 - 50079003
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||| ||||    
T  50078944 ctaattctacccaaagtc-caaatctcttcccgtaaccaagagacttaatcctaatagtgt 50079003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 50307669 - 50307728
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  50307669 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 50307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 51757689 - 51757630
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  51757689 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 51757630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 13785490 - 13785553
Alignment:
Q  258 cctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||||| ||||||||||||| || | |||||||||||||||| | ||| || ||||||||||||    
T  13785490 cctagtgtttgttgccaagagaaatctctacaaaccctagttatgttgctgacttctaatcctt 13785553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 26332613 - 26332671
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||| ||||    
T  26332613 taattctacacaaagtctc-aatctcttctcgtgaccaagagactaaatcctaatagtgt 26332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16226326 - 16226266
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  16226326 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 16226266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16231722 - 16231662
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||| ||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  16231722 ctaattctacccaaaggctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 16231662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23785998 - 23785938
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  23785998 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 23785938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 40134102 - 40134050
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatccta 225  Q
    |||||| ||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  40134102 ctaattttacccaaaacctc-aatctcttcccgtgaccaagagactcaatccta 40134050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 47179872 - 47179812
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  47179872 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 47179812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6995823 - 6995882
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| |||||||||||||||| |||| ||||    
T  6995823 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcttaatagtgt 6995882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16429115 - 16429056
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| || | ||| ||||||||| ||||| ||||||||||||||| ||||    
T  16429115 ctaattctacccaaattccc-aatctcttcccgtaaccaaaagactcaatcctaatagtgt 16429056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 17319045 - 17318994
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcct 224  Q
    |||||||||||||||||| | ||| | ||||||| ||||||||||||||||||    
T  17319045 ctaattctacccaaagtccc-aatctgttcccgtaaccaagagactcaatcct 17318994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20302617 - 20302558
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | ||||||| | ||||||||||||||||||||| ||||    
T  20302617 ctaattctacccaaagtc-ctagtctcttcccataaccaagagactcaatcctaatagtgt 20302558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28842653 - 28842594
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||| ||||||||||||||| ||||    
T  28842653 ctaattctacccaaagtctc-agcctcttcccgtaaccaatagactcaatcctaatagtgt 28842594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 28998376 - 28998435
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| |||||| || ||||||||||||||||||||| ||||    
T  28998376 ctaattctacccaaagcccc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 28998435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 29004092 - 29004151
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| |||||| || ||||||||||||||||||||| ||||    
T  29004092 ctaattctacccaaagcccc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 29004151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 30790473 - 30790544
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctc 191  Q
    ||||||||||||||| ||  | |||| ||||||||||||| | ||| |||| |||||||||| |||||||||    
T  30790473 gagtaactttacaaaagagatatcaatgggttacaagaataagtctccaaacctaattctacacaaagtctc 30790544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 31490071 - 31490012
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||||| ||| ||||||||| ||||||| | ||||||||||| ||||    
T  31490071 ctaattctatccaaagtctc-aatctcttcccgtaaccaagaaattcaatcctaatagtgt 31490012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 380
Target Start/End: Original strand, 33838958 - 33839273
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    |||||||||| |  |||| |||||||||||| ||   |||||||||||||| |||| ||||||||||||||||| | |||||||| ||||||||||||||    
T  33838958 ggggagagagcagttctccgttccactataacttttaagtaactttacaaaagattccaaagggttacaagaattagtcttcaaacctaattctacccaa 33839057  T
Q  186 agtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaa-----------ggttattcaatcctaaccctagtatttgttgcca 274  Q
    ||||| |||| ||||||  ||||||||||||||||||||||| |||| | |||||           ||| |||||||   ||||||||| ||||||||||    
T  33839058 agtcttgaatctcttcc--tgaccaagagactcaatcctaatagtgtttcttcaaggtgaatcaatggtgattcaatttcaaccctagtgtttgttgcca 33839155  T
Q  275 agaaaattatctacaaaccctagttttattgttggcttctaatcctt------------tttctactctttctttcatcttatacaagatctgaatttat 362  Q
    ||| ||   | |||||| |||||||||||| ||||||| ||||||||            | |||||||| | |||||||| ||| |||||||| ||||||    
T  33839156 agagaaaactttacaaatcctagttttattcttggcttataatccttgtttttctctactctctactctatttttcatctgataaaagatctgtatttat 33839255  T
Q  363 agagaaatataaccctca 380  Q
    ||||||||| ||||||||    
T  33839256 agagaaataaaaccctca 33839273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 91 - 243
Target Start/End: Original strand, 13985121 - 13985271
Alignment:
Q  91 gagagtaactctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtct 190  Q
    ||||| |||||||||||||||||||||  | | ||||||||| ||  |||| ||||||||||||||||||| | |||||| ||||||||||||||||||     
T  13985121 gagagcaactctctgttccactataatg-aggggtaactttataagagattccaaagggttacaagaatcagt-ttcaaacctaattctacccaaagtcc 13985218  T
Q  191 cgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    ||||| |||||| |||||||||||||||||||||||| |||| | ||||||||    
T  13985219 cgaatctcttcctgtgaccaagagactcaatcctaatagtgttttttcaaggt 13985271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 322
Target Start/End: Original strand, 31573796 - 31573996
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | ||||||  |||||||||| | |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31573796 gagtaactttacaaaagagatatcaaagaattacaagaattagtcttcaaacctaattctacccaaagtctc-aatctcttcccgtgaccaagagactca 31573894  T
Q  220 atcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatcc 319  Q
    |||||||  |||| |   |||||| | ||||||| |||| |||| ||||||||||||| ||   |||||||| |||||||||  ||||||||||||| ||    
T  31573895 atcctaacagtgt-ttcccaaggtgaatcaatcccaaccatagtgtttgttgccaagagaaaactctacaaatcctagttttcgtgttggcttctaaacc 31573993  T
Q  320 ttt 322  Q
    |||    
T  31573994 ttt 31573996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 31035417 - 31035272
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | | ||| |||||||||||||  | |||||||||||||||| ||| |||||||||||||||||| | |||||||| ||||||||||| |    
T  31035417 ggggagagagcagccctccgttccactataatg-atgagtaactttacaaagagatatcaaagggttacaagaataagtcttcaaacctaattctaccta 31035319  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||| ||| |||||| ||||||||||||||||||| ||| |||||    
T  31035318 aagtctc-aatctcttcctgtgaccaagagactcaatcataacggtgt 31035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 31578313 - 31578449
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| |  |||| |||||||||||||  | ||||||||||||||| ||  | ||||| |||||||||||| | |||||||| ||||||||||||    
T  31578313 ggggagagagcagttctccgttccactataatg-atgagtaactttacaaaagagatatcaaaaggttacaagaattagtcttcaaacctaattctaccc 31578411  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatc 222  Q
    |||||| | ||| ||||||| ||||||||||||||||||    
T  31578412 aaagtc-ccaatctcttcccatgaccaagagactcaatc 31578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 222
Target Start/End: Complemental strand, 6376328 - 6376153
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatg-gggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttca 144  Q
    |||||||||||| |||||  ||||||||  ||||| | || ||||||||| | |  ||||||||||||||||  | |||||||||||||||| ||| |||    
T  6376328 aatttgtttactaagttcggtccaatactgacctagtctgagggagagagcagccttctgttccactataatg-atgagtaactttacaaagagatatca 6376230  T
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatc 222  Q
    || ||| |||||||| | |||||||| ||||||||||  |||||||| ||| |||||  |||||||||||||||||||    
T  6376229 aaaggtaacaagaattagtcttcaaacctaattctacataaagtctc-aatctcttcatgtgaccaagagactcaatc 6376153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 13985893 - 13985993
Alignment:
Q  131 tacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggt 230  Q
    |||||| |||| ||||||||||||||||||| | |||||| |||||| ||||||||||| ||||| |||||||||||  ||||| |||||||||||| ||    
T  13985893 tacaaaagattccaaagggttacaagaatcagt-ttcaaaactaattatacccaaagtcccgaatctcttcccgtgattaagagtctcaatcctaatagt 13985991  T
Q  231 gt 232  Q
    ||    
T  13985992 gt 13985993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 17847763 - 17847680
Alignment:
Q  148 ggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||| | |||||||| |||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||| ||||    
T  17847763 ggttacaagaattagtcttcaaacctaattctacccaaagtctc-aatctcttcccgtgatcaagagattcaatcctaatagtgt 17847680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 351
Target Start/End: Original strand, 23179660 - 23179869
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||| |||| |||||| | |   |||||| |||||||||||||||||||||||| ||| | |||||||||| | |    
T  23179660 gttacaagaatcagtcttcaaacctaattttacc-aaagtcac-agcctcttccggtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 23179757  T
Q  248 caa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcc---tttttctactctttctttc 338  Q
    |||     ||| ||||||||| || |||||||||| ||||| |||| ||||||||||||   ||||||||||||| ||   |||||||||||||  ||||    
T  23179758 caaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctactcttcttttc 23179856  T
Q  339 atcttatacaaga 351  Q
    |||| ||||||||    
T  23179857 atctgatacaaga 23179869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 316
Target Start/End: Complemental strand, 30423295 - 30423123
Alignment:
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt- 247  Q
    |||||| ||| | |||||||| ||||||||| ||||||| || ||| |||||||| |||||||||||||||||||||  ||| | |||||||||| | |     
T  30423295 ttacaaaaattagtcttcaaacctaattctatccaaagt-tccaatctcttcccgcgaccaagagactcaatcctaaaagtgttttgttcaaggtgaatc 30423197  T
Q  248 ----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
        |||||  | ||||||| ||||||||||||| ||||| |||| ||||||||||||  ||||||||||||||    
T  30423196 aaaacaatctcagccctagtgtttgttgccaagagaaattctctataaaccctagtttgtttgttggcttctaa 30423123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 316
Target Start/End: Complemental strand, 27911228 - 27911081
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||| |   |||||| | |||| |||  ||||||||| |||||    
T  27911228 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccctcaaaccctagtgtttgt 27911131  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||||   ||| | | |||||||||||||||| |||||| |||||||    
T  27911130 tgccaagagacaaactctatacaaaccctagttttgttgttgccttctaa 27911081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 316
Target Start/End: Complemental strand, 27957647 - 27957500
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||| |   |||||| | |||| |||  ||||||||| |||||    
T  27957647 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaaccctcaaaccctagtgtttgt 27957550  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||||   ||| | | |||||||||||||||| |||||| |||||||    
T  27957549 tgccaagagacaaactctatacaaaccctagttttgttgttgccttctaa 27957500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 277
Target Start/End: Complemental strand, 31162551 - 31162320
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactat---ggggagagagtaactctctgttccactataatttacgagtaactttacaaa--ggatt 141  Q
    ||||||||||| ||||||  ||||||||  ||||| | |   |||||||||| | | |||||||||||||||| | | |||||| ||||||||   |||     
T  31162551 aatttgtttacccagttcggtccaatactgacctagtctgggggggagagagcagccctctgttccactataa-tgatgagtaattttacaaaagagata 31162453  T
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag 241  Q
    |||| | ||||||||||| | |||||  | |||||||||||||||||| | ||| |||||| |||||||||||||||||||||||| |||| |   ||||    
T  31162452 tcaatgagttacaagaataagtcttc-cacctaattctacccaaagtc-ccaatctcttccggtgaccaagagactcaatcctaatagtgt-ttcccaag 31162356  T
Q  242 gttattcaatcctaaccctagtatttgttgccaaga 277  Q
    || | |||| ||||||  |||| |||||||||||||    
T  31162355 gtgaatcaaccctaacgttagtgtttgttgccaaga 31162320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 33032737 - 33032566
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  33032737 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 33032640  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||  |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  33032639 caaaacaatctcaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 33032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 275
Target Start/End: Complemental strand, 3896162 - 3895932
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaaagga--tttc 143  Q
    |||||||||||||| ||| |||||||||  | ||||||||||| |||||| | |  || |||| ||| ||||  | ||||||||||||||| ||  | ||    
T  3896162 aatttgtttactcaattcgatccaatactgatctactatgggggagagagcagccatccgttctactttaatg-atgagtaactttacaaaagagatatc 3896064  T
Q  144 a-aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaagg 242  Q
    | ||| ||||||||||| ||| |||||| |||||| ||| ||||||| | ||| |||||||||||| |||||||||||||  ||| |||| | | ||| |    
T  3896063 ataagagttacaagaattaattttcaaacctaattatactcaaagtccc-aatttcttcccgtgacgaagagactcaatcgcaatagtgtttctccaaag 3895965  T
Q  243 ttattcaatcctaaccctagtatttgttgccaa 275  Q
    | | ||||||| ||||||| | |||||||||||    
T  3895964 tgaatcaatcccaaccctattgtttgttgccaa 3895932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 14477490 - 14477351
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| | || |   |||||| | |||| |||  ||||||||| |||||    
T  14477490 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagcgt-ttcccaaggtgaatcaaccctcaaaccctagtgtttgt 14477393  T
Q  270 tgccaaga---aaattatctacaaaccctagttttattgttg 308  Q
    ||||||||   ||| | | |||||||||||||||| ||||||    
T  14477392 tgccaagagacaaactttatacaaaccctagttttgttgttg 14477351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 30480624 - 30480683
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||    
T  30480624 ctaattctacccaaagcctc-aatctcttcccgtgaccaagagactcaatcctaatagtgt 30480683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 9021206 - 9021287
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  9021206 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 9021287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 3276427 - 3276256
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||| ||||| | |   ||||||| ||||||||||||||||||||||| ||| | |||||||||| | |    
T  3276427 gttacaagaatcagtcttcaaacctaattctaccc-aagtc-ccagcctcttcccatgaccaagagactcaatcctaatagtgctttgttcaaggtaaat 3276330  T
Q  248 -----caatcctaaccctagtatttgttgccaag-aaaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||| | | ||||||| ||| |||||| |||| |||||||||||||  |||||||||||||    
T  3276329 caaaacaatcccaaccct-ggagttgttgcaaagaaaaattctctataaaccctagtttttgtgttggcttctaa 3276256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 15949617 - 15949536
Alignment:
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| | |||||||| |||||| ||||||| ||| ||||| |||||||||||||||||||||  |||||||| ||||    
T  15949617 ttacaagaattagtcttcaaacctaattttacccaa-gtcccgaatctcttcccgtgaccaagagactatatcctaatagtgt 15949536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 16752559 - 16752702
Alignment:
Q  85 tggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    ||||||||||||| ||||| | |||||||||||  | ||||  |||||||||| |||   || | ||| ||||||||| |||||||| ||||||||||||    
T  16752559 tggggagagagtagctctccgatccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcagtcttcaaacctaattctaccc 16752655  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    || ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  16752656 aa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 16752702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 316
Target Start/End: Original strand, 2267119 - 2267294
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggtt 244  Q
    |||||||||||||| | |||||||| |||||||||||| ||||| | ||| |||||  |||||||||||||||||||||||  ||| | ||||||| ||     
T  2267119 agggttacaagaattagtcttcaaacctaattctaccc-aagtc-ctaatctcttcatgtgaccaagagactcaatcctaacagtgttttgttcaacgtg 2267216  T
Q  245 att-----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | |     |||||  |||| |||| ||||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  2267217 aatcaaaacaatctcaaccgtagtgtttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 2267294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 11701013 - 11701132
Alignment:
Q  99 ctctctgttccactataatttacgagtaactttacaaaggatttcaaa-gggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatat 197  Q
    ||||| |||||||||||| | | ||||||||||||||| |||| |||| ||||||||||||| | |||||||||||||||  ||| ||||         |    
T  11701013 ctctccgttccactataact-atgagtaactttacaaaagattccaaaagggttacaagaattagtcttcaaatctaatttcacctaaag---------t 11701102  T
Q  198 cttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||||||| |||||    
T  11701103 cttcccgtgaccaagagactcaattctaat 11701132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 28328052 - 28327910
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | ||||| |||||||||||||  | ||||  |||||||||| |||   || | ||| ||||||||| |||||||| |||||||||||||    
T  28328052 ggggagagagcagctctccgttccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcagtcttcaaacctaattctaccca 28327956  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    | ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  28327955 a-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 28327910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27107018 - 27107077
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  27107018 ctaattctacccaaagtcac-aatctcttcccgtaaccaagagactcaatcctaatagtgt 27107077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 28895582 - 28895504
Alignment:
Q  152 acaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  28895582 acaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 28895504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 31035238 - 31035136
Alignment:
Q  215 actcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaattatctacaaaccctagttttattgttggctt 312  Q
    |||||||||||||||||| |   |||||| | ||||||| ||||||||| |||||||||||||  ||| | | |||||||||||||||| |||||| |||    
T  31035238 actcaatcctaatggtgtttcc-caaggtgaatcaatcccaaccctagtgtttgttgccaagagcaaactctatacaaaccctagttttcttgttgactt 31035140  T
Q  313 ctaa 316  Q
    ||||    
T  31035139 ctaa 31035136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41384958 - 41384899
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||| ||| ||| ||||||||| ||||||||||||||||||||||||||    
T  41384958 ctaattctacctaaag-ctccaatctcttcccgtaaccaagagactcaatcctaatggtgt 41384899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 590873 - 590784
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  590873 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 590784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 16757370 - 16757447
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  16757370 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 16757447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 29554930 - 29555039
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||||  |||||||||||| ||||| |||| |    
T  29554930 tcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagagaaattctctaaa 29555028  T
Q  290 aaccctagttt 300  Q
    |||||||||||    
T  29555029 aaccctagttt 29555039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 1225381 - 1225321
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  1225381 tctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 1225321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 33020995 - 33021048
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaat 195  Q
    |||||||||||||||||||| |||||||| |||||||||| |||| || |||||    
T  33020995 tcaaagggttacaagaatcagtcttcaaacctaattctacacaaaatcccgaat 33021048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 3005753 - 3005812
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| |||| |||||||||||||||||||| ||||| ||||    
T  3005753 ctaattctacccaaagtccc-aatctctttccgtgaccaagagactcaatgctaatagtgt 3005812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4424232 - 4424173
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  4424232 ctaattctatccaaag-ctccaatctcttcccgtaaccaagagactcaatcctaatagtgt 4424173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 14419312 - 14419371
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||||| |||| ||||    
T  14419312 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcttaatagtgt 14419371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 15809432 - 15809373
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | ||||||||| ||||||||||||||||||||| ||||    
T  15809432 ctaattctacccaaagtc-ctagtttcttcccgtaaccaagagactcaatcctaatagtgt 15809373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 25952734 - 25952629
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgt 269  Q
    |||||||||||||| ||||| ||| ||||| ||| |||||||||||||||||||||  ||| | | |||||| | |||| |||  ||||||||| |||||    
T  25952734 ctaattctacccaatgtctc-aatttcttctcgtaaccaagagactcaatcctaatattgt-tttccaaggtgaatcaaccctcaaaccctagtgtttgt 25952637  T
Q  270 tgccaaga 277  Q
    ||||||||    
T  25952636 tgccaaga 25952629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 26268331 - 26268367
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaa 185  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26268331 gttacaagaatcagtcttcaaatctaattctacccaa 26268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 32339523 - 32339464
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  32339523 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 32339464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 17799569 - 17799604
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17799569 tcttcccgtgaccaagagactcaatcctaatagtgt 17799604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 15956171 - 15956118
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||| ||||||||||    
T  15956171 ctaattctacccaaagtccc-aatctcttcccgtgaccaaaagattcaatcctaa 15956118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 43079817 - 43079757
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  43079817 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 43079757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 15072925 - 15072865
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | |   ||||| ||| ||||||||||||||||||||| ||||    
T  15072925 ctaattctacccaaagtcccaaccctcttctcgtaaccaagagactcaatcctaatagtgt 15072865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 28283340 - 28283399
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||| ||||||||||| ||||    
T  28283340 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagattcaatcctaatagtgt 28283399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 33541509 - 33541568
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||| ||||||||||||| ||||    
T  33541509 ctaattctaccaaaagtccc-aatctcttcccgtaaccaagatactcaatcctaatagtgt 33541568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 86 - 316
Target Start/End: Complemental strand, 9022603 - 9022372
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaa-ag-ggttacaagaatcaatcttcaaatctaattctacc 182  Q
    |||||||||| | | || ||||||||||||||  | |||||||||||||||| ||| |||| || |||||||||||| | |||||||| ||||||| |||    
T  9022603 ggggagagagcagccctttgttccactataatg-atgagtaactttacaaagagatatcaatagaggttacaagaattagtcttcaaacctaattcaacc 9022505  T
Q  183 caaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaatt 282  Q
    ||||||||| ||| ||||||||||||||||| | || ||||||||  ||| | | |||||| | ||||||| |||| |||| ||||||||||||| ||||    
T  9022504 caaagtctc-aatctcttcccgtgaccaagaaattctatcctaatactgtttctccaaggtgaatcaatcccaaccatagtgtttgttgccaagagaatt 9022406  T
Q  283 atctacaaaccctagttttattgttggcttctaa 316  Q
     ||||||||||||||||||  ||||| |||||||    
T  9022405 ctctacaaaccctagttttgatgttgacttctaa 9022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 301
Target Start/End: Complemental strand, 9864007 - 9863791
Alignment:
Q  86 ggggagagagtaactctctgttccactataat--ttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacc 182  Q
    |||||||||| | ||||| |||||||||||||  | | |||||||||||||||| ||| ||||| |||||||||||| | ||||||||  ||||||||||    
T  9864007 ggggagagagcagctctccgttccactataatgatgatgagtaactttacaaagagatatcaaaaggttacaagaattagtcttcaaacttaattctacc 9863908  T
Q  183 caaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaagaaaatt 282  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||| | || |   |||||| | |||| || |||| |||| |||||||||||||| |      
T  9863907 caaagtctc-aatctcttcccgtgaccaaaagactcaatcctaatagggt-ttcccaaggtgaatcaaacccaaccttagtgtttgttgccaagaacaaa 9863810  T
Q  283 atctacaaaccctagtttt 301  Q
     ||||||||||||||||||    
T  9863809 ctctacaaaccctagtttt 9863791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 54906887 - 54906740
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | || || |||||| ||||| ||  |||||||||||||||| ||| |||||| ||||||||||||| |||||||| ||||||||||| |    
T  54906887 ggggagagagcagctttccgttccattataacttttgagtaactttacaaagagatatcaaagagttacaagaatcagtcttcaaacctaattctaccta 54906788  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||| |||| |||||| |||||||||||||||||| ||||| ||||    
T  54906787 aagtcttgaatctcttccagtgaccaagagactcaattctaatagtgt 54906740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 316
Target Start/End: Original strand, 38208774 - 38208948
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaag 241  Q
    |||||||||||||| ||||||||||||||  ||| |||||| |||||||||||| |||||  |||||||| |||||||||| |||| |||| | | ||||    
T  38208774 tcaaagggttacaataatcaatcttcaaacttaaatctacctaaagtctcgaatctcttcttgtgaccaaaagactcaatcttaatagtgtttctccaag 38208873  T
Q  242 gttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | | ||||||  ||||||||| ||||||||||||| |||| ||||||||| |||| | |  |||||||||||||    
T  38208874 atgaatcaatctcaaccctagtgtttgttgccaagagaattttctacaaacgctagatatgatgttggcttctaa 38208948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 16185871 - 16186010
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagg-atttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | | |||||||||||||||||  | ||||||||||||||||  || |||||||||| ||||||| | |||||||| |||||||||||||    
T  16185871 ggggagagagcagccctctgttccactataatg-atgagtaactttacaaagatatatcaaagggttgcaagaataagtcttcaaacctaattctaccca 16185969  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||| || ||| ||||||||||||||||||||||||||||||    
T  16185970 aagt-tccaatctcttcccgtgaccaagagactcaatcctaa 16186010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 316
Target Start/End: Complemental strand, 28454020 - 28453752
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatgggg-agagagtaactctctgttccactataatttacgagtaactttacaaagga--tttc 143  Q
    ||||||||||| ||||||  |||||||| |||||| | ||||| ||||||||  |||| |||||||||||||  | ||||||||||||||| ||  | ||    
T  28454020 aatttgtttacccagttcggtccaatactaacctagtctgggggagagagtagttctccgttccactataatg-atgagtaactttacaaaagagatatc 28453922  T
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    ||| | |||||||||| | |||||||  |||||||||||||| ||| | ||| ||||||||| ||||||||||||||||||||  |||| |   ||||||    
T  28453921 aaaagtttacaagaattagtcttcaac-ctaattctacccaaggtc-caaatctcttcccgtaaccaagagactcaatcctaacagtgt-ttcccaaggt 28453825  T
Q  244 tattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
     | ||||||| ||||||||| ||| |||||||||  |   ||| ||||||||||||||| |||||||||||||    
T  28453824 gaatcaatcccaaccctagtgtttcttgccaagagcaaactctgcaaaccctagttttagtgttggcttctaa 28453752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 316
Target Start/End: Complemental strand, 10113201 - 10112937
Alignment:
Q  53 tttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaag-gg 149  Q
    ||||| ||||||  |||||||| |||||| | | |||||||||| | |||||  ||||||||||||  |  |||||| |||||||| ||| |||||  ||    
T  10113201 tttacccagttcggtccaatactaacctagtcttggggagagagcagctctccattccactataatg-attagtaacattacaaagagatatcaaaaagg 10113103  T
Q  150 ttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatctt-cccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattc 248  Q
    |||||||||| | ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||| |||| |||| |  | ||||| | ||    
T  10113102 ttacaagaattagtcttcaaatctaattctacccaaagtc-ctaatctcttccccgtgaccaagagactcaatcataatagtgtttcct-aaggtgaatc 10113005  T
Q  249 aatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||  ||||||||| |||||||||||||  |   ||||||||||||||||||  |||||||||||||    
T  10113004 aatctcaaccctagtgtttgttgccaagagcaaactctacaaaccctagtttttgtgttggcttctaa 10112937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 3982213 - 3982359
Alignment:
Q  87 gggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    ||||||||| | | ||| |||||||||||||  | ||||||||||||||| ||  | |||||| ||||||||||||| ||||||||  ||||||||||||    
T  3982213 gggagagagcagccctccgttccactataatg-atgagtaactttacaaaagagatatcaaagtgttacaagaatcagtcttcaaacttaattctaccca 3982311  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| | ||| ||||||||||||||||| ||||||||||||| ||||    
T  3982312 aagtcccaaatctcttcccgtgaccaagaaactcaatcctaatagtgt 3982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 316
Target Start/End: Complemental strand, 19322905 - 19322761
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |   |||||| | |||| || ||||||||| |||||||    
T  19322905 ctaattctacccaaagtctc-aatctcttcccgtgaccaagagactcaatcctaatagtgt-ttcccaaggtgaatcaacccaaaccctagtgtttgttg 19322808  T
Q  272 ccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||  ||| | | |||||||||||||||| |||||| |||||||    
T  19322807 ccaagagcaaactctatacaaaccctagttttcttgttgacttctaa 19322761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 3760234 - 3760106
Alignment:
Q  99 ctctctgttccactataatttacgagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatc 198  Q
    ||||| |||||||||||||||  |||||||||||| || |||| |||||| || ||||||| |  ||||||| |||||||||||||||||    ||| ||    
T  3760234 ctctccgttccactataatttttgagtaactttacgaaagattccaaaggattgcaagaattagccttcaaaactaattctacccaaagtgctaaatctc 3760135  T
Q  199 ttcccgtgaccaagagactcaatcctaat 227  Q
    || ||||||||||||||||||||||||||    
T  3760134 tttccgtgaccaagagactcaatcctaat 3760106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 40999000 - 40999126
Alignment:
Q  101 ctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatc 198  Q
    ||||||||||||||||   | ||||||||||||||| ||  | |||||||||||||| |  || ||| |||| |||||||||||||||||||||| | ||    
T  40999000 ctctgttccactataacg-atgagtaactttacaaaagagatatcaaagggttacaaaacacagtctccaaacctaattctacccaaagtctcga-tctc 40999097  T
Q  199 ttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||||||||||||||    
T  40999098 ttcccgtgaccaagagactcaatcctaat 40999126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 31983524 - 31983709
Alignment:
Q  47 aatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaag--gatttca 144  Q
    ||||||||||| |||||   || |||||  ||||| ||| ||||||||| | | ||| |||||||||||||  | |||||| ||||||||   ||| |||    
T  31983524 aatttgtttacccagtttggtctaatacttacctagtattgggagagagcagccctccgttccactataatg-atgagtaattttacaaaaaagatatca 31983622  T
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||| ||| | |||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||| |||| |||| ||||    
T  31983623 aagggttacaaaaataagtcttcaaacctaattctacccaaagtctc-aatctcttcccatgaccaagagacttaatcttaatagtgt 31983709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 18534954 - 18535082
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||| |  ||||||| | |||| || ||||||||| |||||||    
T  18534954 ctaattctacccaaagtctc-aatctcttctcgtgaccaagagactcaatcctaatagtgt-ttctcaaggtgaatcaaccccaaccctagtgtttgttg 18535051  T
Q  272 ccaaga--aaattatctacaaaccctagttt 300  Q
    ||||||  ||| | | |||||||||||||||    
T  18535052 ccaagagcaaactctatacaaaccctagttt 18535082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 38890260 - 38890406
Alignment:
Q  85 tggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacc 182  Q
    ||||||||||| | | |||||||||||||||||  | ||||||||||||||| ||  | |||| ||||||||||||| | ||| |   ||||||||||||    
T  38890260 tggggagagagcagccctctgttccactataatg-atgagtaactttacaaaagagatatcaatgggttacaagaataagtctccct-tctaattctacc 38890357  T
Q  183 caaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||| ||||    
T  38890358 caaagtctc-aatctcttcccgtgatcaagagactcaatcctaatagtgt 38890406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 16638913 - 16638738
Alignment:
Q  146 agggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggtt 244  Q
    |||||||||||||||| |||||||| || ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||  ||| | |||| |||||     
T  16638913 agggttacaagaatcagtcttcaaacctcattctaccc-aagtctc-aatctcttcctgtgaccaagagactcaatcctaacagtgttttgtttaaggtg 16638816  T
Q  245 att-----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    | |     |||||| ||||||||| |||||||| |||| ||||| |||| ||||||||||||   |||||||||||||    
T  16638815 aatcaaaacaatcccaaccctagtgtttgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaa 16638738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 5336775 - 5336956
Alignment:
Q  45 agaatttgtttactcagttcaatccaataccaacctactat-ggggagagagtaactctctgttccactataatttacgagtaacttt-acaaag-gatt 141  Q
    |||||||||||| |||||||| |||||||   ||||||||| |||||||||| | ||||| |||||||||||||  | || |  |||| |||||| |||     
T  5336775 agaatttgtttaatcagttcagtccaatattgacctactataggggagagagcagctctccgttccactataatg-atgaatttcttttacaaagagata 5336873  T
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    | | ||| |||||||||| | |||||||| |||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||    
T  5336874 taagaggattacaagaattagtcttcaaacctaattctacccaa-gtccc-aatctcttcccgtgaccaagagactcaatcctaa 5336956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 47150986 - 47151069
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    |||||||||||||||||| | |||||||| ||||||||||||||| |||| ||| |||||  |||||||||||||||||||||||    
T  47150986 tcaaagggttacaagaataagtcttcaaacctaattctacccaaattctc-aatctcttcatgtgaccaagagactcaatcctaa 47151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 321
Target Start/End: Complemental strand, 36769562 - 36769385
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgt-gttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||| |   ||||||||||||||||| |||| |||||||| |||| | ||||||||| | |    
T  36769562 gttacaagaatcagtcttcaaacctaattttacccaa-gtctc-agcctcttcccgtgaccaagaaactcgatcctaatagtgttttgttcaaggtgaat 36769465  T
Q  248 caa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||     ||| ||||||||| ||||||||||||| ||||| ||| |||||||||||||   ||||||||||||| ||||    
T  36769464 caaaacaatcccaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgttggcttctaaacctt 36769385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 4558394 - 4558222
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  4558394 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtaaat 4558297  T
Q  248 ca-----atcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||     | || | ||||||| ||||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  4558296 caaaaacaacccagccctagtgtttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 4558222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 2881036 - 2880972
Alignment:
Q  123 agtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagt 188  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  2881036 agtaactttacaaaggatt-caaagggttacaagaatcagtcttcaaacctaattctaccgaaagt 2880972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 316
Target Start/End: Original strand, 5516338 - 5516521
Alignment:
Q  144 aaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaa--- 240  Q
    |||| ||||||||| | | ||||||||  ||||||||| ||||||||||||| ||||||||||| |||||||| ||| ||||||||||| | | |||       
T  5516338 aaagagttacaagagttagtcttcaaacttaattctacgcaaagtctcgaatctcttcccgtgagcaagagacccaaacctaatggtgtttctccaagat 5516437  T
Q  241 --------ggttattcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
            | | ||||||||| ||||||||| ||||||||||| | || | ||||||||||||| |||| ||||||| ||||||    
T  5516438 gaatcaatgatgattcaatcccaaccctagtgtttgttgccaaaagaaatctctacaaaccctatttttgttgttggattctaa 5516521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 23001477 - 23001566
Alignment:
Q  125 taactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagag 214  Q
    |||||||||||| ||||||||| |||||||| ||||  |||||||| ||||||||||| |||||| ||||| ||||||| | ||||||||    
T  23001477 taactttacaaaagatttcaaatggttacaataatcggtcttcaaacctaattctacctaaagtcccgaatctcttcccataaccaagag 23001566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 300
Target Start/End: Original strand, 18537510 - 18537724
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | | ||| |||||||||||||  | ||||||||||||||| ||  | |||| ||||||||||||| | ||| |    |||||||||||     
T  18537510 ggggagagagcagccctccgttccactataatg-atgagtaactttacaaaagagatatcaatgggttacaagaataagtctcccgc-ctaattctacca 18537607  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttgccaaga--aaat 281  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||| |  | ||||| | |||| || |||||||||  ||||||||||||  |||     
T  18537608 aaagtctc-aatctcttcccgtgaccaagagactcaatcctaatagtgtttcct-aaggtgaatcaaccccaaccctagtggttgttgccaagagcaaac 18537705  T
Q  282 tatctacaaaccctagttt 300  Q
    | | |||||||||||||||    
T  18537706 tctatacaaaccctagttt 18537724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 25699830 - 25699677
Alignment:
Q  151 tacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-- 247  Q
    ||||||||||| |||||||| ||||||||||| |||||| | | | ||||||||||||||||||||||||||||||| ||| | |||||||||| | |      
T  25699830 tacaagaatcagtcttcaaacctaattctacc-aaagtccc-agtctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatca 25699733  T
Q  248 ---caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
       |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  25699732 aaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 25699677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 4874573 - 4874659
Alignment:
Q  145 aagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| | ||||||||| |||||| |||||||||  ||||| |||||||||||||||||||||| ||| |||| ||||    
T  4874573 aagggttacaagaattagtcttcaaatataattc-acccaaagttacgaatctcttcccgtgaccaagagactctatcttaatagtgt 4874659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 321
Target Start/End: Complemental strand, 15312399 - 15312223
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |  ||||||||||||||||| |||||||||||||| ||| | |||||||||| | |    
T  15312399 gttacaagaatcagtcttcaaacctaattctacccaa-gtcac-agcatcttcccgtgaccaagcgactcaatcctaatagtgctttgttcaaggtgaat 15312302  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||   |||||| |||||| ||||    
T  15312301 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaacctt 15312223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 16489432 - 16489339
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | | | ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  16489432 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agtctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 16489339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 4556158 - 4556313
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| ||||||||||| |||||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  4556158 gttacaagaatcagtcttcaaacctaattctacc-aaagtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 4556255  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  4556256 cgaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 4556313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 4570177 - 4570006
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | ||  |||||||||||||||||||||| |||||||| ||| | |||||||||| | |    
T  4570177 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-aacctcttcccgtgaccaagagactcgatcctaatagtgttttgttcaaggtgaat 4570080  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||   ||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  4570079 caaaacaatcccaaccctagt-gatgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaa 4570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 31300507 - 31300336
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  31300507 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaat 31300410  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
         |||||| |||||||||  ||||||| |||| ||||| |||| |||||||||||| | |||||| ||||||    
T  31300409 caaaacaatcccaaccctagt-gttgttgcaaagagaaattctctataaaccctagtttgaatgttggtttctaa 31300336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 36771479 - 36771307
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgt-gttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||| |||||||||||||||||| |||| |||| | ||||||||| | |    
T  36771479 gttacaagaatcagtcttcaaacctaattctacccaa-gtcac-agcctcttcccatgaccaagagactcaatcataatagtgttttgttcaaggtgaat 36771382  T
Q  248 caa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||     ||  ||||||||| ||||||||||||| ||||| ||| |||||||||||||   |||||||||||||    
T  36771381 caaaacaatctcaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgttggcttctaa 36771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 55822418 - 55822267
Alignment:
Q  77 acctactatggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaa 175  Q
    ||||| ||||||||||||| | ||||| | |||||||||||  | ||||  |||||||||| |||   || | ||| ||||||||| |||||||| ||||    
T  55822418 acctagtatggggagagagcagctctccgatccactataatgaatgagtttctttacaaagagat---aatgagtttcaagaatcagtcttcaaacctaa 55822322  T
Q  176 ttctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||| ||||| |   ||||||||||||||||||||||||||||||| ||||    
T  55822321 ttctacccaa-gtctc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 55822267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 12102385 - 12102239
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | | ||| |||||||||||||  | ||||||||||||||| ||  | |||  ||||||||||||| | ||| |||| ||||||||||||    
T  12102385 ggggagagagcagccctccgttccactataatg-atgagtaactttacaaaagagatatcagtgggttacaagaataagtctccaaacctaattctaccc 12102287  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| || ||| | ||||| ||||||||| ||||||||||||| ||||    
T  12102286 aaagt-tccaatcttttcccatgaccaagatactcaatcctaatagtgt 12102239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2891503 - 2891444
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  2891503 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 2891444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6133084 - 6133025
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  6133084 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 6133025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13547366 - 13547307
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  13547366 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 13547307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24879201 - 24879142
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  24879201 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 24879142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24880663 - 24880604
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  24880663 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 24880604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 300
Target Start/End: Complemental strand, 26557882 - 26557666
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctaccca 184  Q
    |||||||||| | ||||| ||||||||||||   | |||||||||||||||| ||| ||||| ||    |||||| | | |||||| ||||||| |||||    
T  26557882 ggggagagagcagctctccgttccactataacg-atgagtaactttacaaagagatatcaaaagg----aagaattagttttcaaacctaattccaccca 26557788  T
Q  185 aagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaagaa 278  Q
    |||||| |||| | |||||||||||| ||||||  |||||||| ||| | |||| ||||| | |     |||||| ||||||||| |||||||||||||     
T  26557787 aagtcttgaatcttttcccgtgaccatgagactatatcctaatagtgttttgtttaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagag 26557688  T
Q  279 aattatctacaaaccctagttt 300  Q
    || | |||| ||||||||||||    
T  26557687 aaatctctataaaccctagttt 26557666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 7050356 - 7050437
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  7050356 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 7050437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 316
Target Start/End: Complemental strand, 47566576 - 47566404
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    |||| |||||||  |||||||| ||||||||||||||| ||  |  | |||||| |||||||||||||||||||||||| ||| | ||||||| || | |    
T  47566576 gttaaaagaatcggtcttcaaacctaattctacccaaattccag--tctcttcctgtgaccaagagactcaatcctaatagtgctttgttcaatgtgaat 47566479  T
Q  248 caa-----tcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    |||     ||  ||||||||| ||||||||||||| ||||| |||| ||||||||||||   |||||||||||||    
T  47566478 caaaacaatctcaaccctagtgtttgttgccaagataaattctctataaaccctagtttgtatgttggcttctaa 47566404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 54906712 - 54906641
Alignment:
Q  245 attcaatcctaaccctagtatttgttgccaagaaaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||||| ||||||||| |||||||| |||| ||   | |||||||||||||||||||||||||||||||    
T  54906712 attcaatcccaaccctagtgtttgttgcaaagagaaaactttacaaaccctagttttattgttggcttctaa 54906641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 316
Target Start/End: Original strand, 8756372 - 8756518
Alignment:
Q  171 tctaattctacccaaagtctcgaatatcttcccgtgacc-aagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgt 269  Q
    ||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||||| | |||| |   |||||| | |||| || ||||||||| |||||    
T  8756372 tctaattctactcaaagtctc-aatctcttcccgtgaccaaagagactcaatcctagtagtgt-ttcccaaggtgaatcaaccccaaccctagtgtttgt 8756469  T
Q  270 tgccaaga--aaattatctacaaaccctagttttattgttggcttctaa 316  Q
    ||||||||  ||| | | |||||| |||| |||| |||||| |||||||    
T  8756470 tgccaagagcaaactctatacaaatcctaattttcttgttgacttctaa 8756518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 15317154 - 15316948
Alignment:
Q  35 aaagaacattagaatttgtttactcagttcaatccaataccaacctactatggggagagagtaactctctgttccactataatt-tacgagtaactttac 133  Q
    ||||||||  ||||||||||||| ||||||  || |||    ||||| | ||||||||||| | |||||||||||||||||||  || ||||  ||||||    
T  15317154 aaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctggggagagagcagctctctgttccactataatgatatgagtttctttac 15317055  T
Q  134 aaag-gatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg- 231  Q
    |||| ||| |  |   ||||||||||| | |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| |||     
T  15317054 aaagagatattga---gttacaagaattagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgc 15316960  T
Q  232 tgtgttcaaggt 243  Q
    | ||||||||||    
T  15316959 tttgttcaaggt 15316948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12395966 - 12396025
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  12395966 ctaattctacccaaagtcac-aatctcttcccgtaaccaagagactcaatcctaatagtgt 12396025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16455453 - 16455394
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||| || ||||||||||||||||||||| ||||    
T  16455453 ctaattctacccaaagtctc-aatctcttcctgtaaccaagagactcaatcctaatagtgt 16455394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 19096095 - 19096036
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  19096095 ctaattctacccaaag-ctctaatctcttcccgtaaccaagagactcaatcctaatagtgt 19096036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 40637286 - 40637227
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||    
T  40637286 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactcgatcctaatagtgt 40637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 48486531 - 48486472
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  48486531 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 48486472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 4884957 - 4884864
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| || ||| ||||||| ||||| |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  4884957 gttacaagaatcagtcttcaaacctgattatacccaa-gtctc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 4884864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 8529346 - 8529257
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  8529346 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggt 8529257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 11853628 - 11853551
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  11853628 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 11853551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 321
Target Start/End: Original strand, 13072080 - 13072256
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| ||||||||||||||| || | |   |||||| ||||||||||||||||||| |||| ||| | |||||||||| | |    
T  13072080 gttacaagaatcagtcttcaaacctaattctacccaaa-tcac-agcctcttccagtgaccaagagactcaatcataatagtgatttgttcaaggtgaat 13072177  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttttattgttggcttctaatcctt 321  Q
         |||||| |||||||||   ||||||||||| ||||| |||| ||||||||||||   ||||||||||||| ||||    
T  13072178 caaaacaatcccaaccctagt-gatgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaacctt 13072256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 16689039 - 16689132
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggt 243  Q
    ||||||||||||| |||||||| |||||||||||| ||||| | |   |||||| |||||||||||||||||||||||| ||| | ||||||||||    
T  16689039 gttacaagaatcagtcttcaaacctaattctaccc-aagtc-ccagcctcttcctgtgaccaagagactcaatcctaatagtgctttgttcaaggt 16689132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 18587046 - 18586894
Alignment:
Q  152 acaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt--- 247  Q
    ||||||| || |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |       
T  18587046 acaagaaccagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatcaa 18586949  T
Q  248 --caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
      |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  18586948 aacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 18586894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 25357904 - 25357794
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctac----ccaaagtctcgaatatcttcccgtgaccaagaga 215  Q
    ||||||||||||||| ||  | |||||||||||||||||| | ||||||||  ||||||||     |||||||| | ||| ||||||| |||||||||||    
T  25357904 gagtaactttacaaaagagatatcaaagggttacaagaataagtcttcaaacttaattctatatatccaaagtccc-aatctcttcccatgaccaagaga 25357806  T
Q  216 ctcaatcctaat 227  Q
    ||||||||||||    
T  25357805 ctcaatcctaat 25357794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 15831178 - 15831069
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaag-aaaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||||  ||||||||||| |||||| |||| |    
T  15831178 tcttcccgtgaccaagagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagaaaaattttctata 15831080  T
Q  290 aaccctagttt 300  Q
    |||||||||||    
T  15831079 aaccctagttt 15831069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9174266 - 9174326
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagac-tcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||    
T  9174266 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagacttcaatcctaatagtgt 9174326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9176594 - 9176654
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  9176594 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 9176654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16931909 - 16931969
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  16931909 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 16931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16934263 - 16934323
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  16934263 ctaattctacccaaagtctc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 16934323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 41997755 - 41997599
Alignment:
Q  122 gagtaactttacaaagga--tttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactca 219  Q
    ||||||||||||||| ||  | | |||||||||||||||| | ||| | |  ||||||||||||||| |||| ||| | ||||||| || ||||||||||    
T  41997755 gagtaactttacaaaagagatattaaagggttacaagaataagtctcccac-ctaattctacccaaaatctc-aatcttttcccgtaactaagagactca 41997658  T
Q  220 atcctaatggtgtgtgttcaaggttattcaatcct--aaccctagtatttgttgccaaga 277  Q
    |||||||| |||| | | |||||| | |||| |||  ||||||||| |||||||||||||    
T  41997657 atcctaatagtgt-tttccaaggtgaatcaaccctcaaaccctagtgtttgttgccaaga 41997599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12400928 - 12400987
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||||| |||| ||||    
T  12400928 ctaattctacccaaagtcac-aatctcttcccgtaaccaagagactcaatcttaatagtgt 12400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13544171 - 13544112
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||| ||| ||||||||||||||||||||| ||||    
T  13544171 ctaattctacccaaagtccc-aatctcttcacgtaaccaagagactcaatcctaatagtgt 13544112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 14787552 - 14787611
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  14787552 ctaattctatccaaagtcac-aatctcttcccgtaaccaagagactcaatcctaatagtgt 14787611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 18709284 - 18709343
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||||||| |||||| ||||    
T  18709284 ctaattctacccaaagtcgc-aatctcttcccgtaaccaagagactcaaccctaatagtgt 18709343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 22295399 - 22295316
Alignment:
Q  142 tcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaa 226  Q
    ||||||||||||| |||| | |||||||  |||||| ||| |||||| || ||| |||| |||||||||||||||| ||||||||    
T  22295399 tcaaagggttacaggaataagtcttcaaccctaattatactcaaagtttc-aatctctttccgtgaccaagagactaaatcctaa 22295316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24889008 - 24888949
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | ||||||||| ||||||||||||||||||||| ||||    
T  24889008 ctaattctacccaaagtc-ctagtctcttcccgtaaccaagagactcaatcctaatagtgt 24888949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 26086097 - 26086156
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| ||||||||| ||||||||||||||||||||| ||||    
T  26086097 ctaattctacccaaagcccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 26086156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 36380561 - 36380502
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| |||||| || ||||||| ||||||||||||| ||||    
T  36380561 ctaattctacccaaagtctc-aatctcttccggtaaccaagatactcaatcctaatagtgt 36380502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 47868613 - 47868554
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  47868613 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 47868554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 56030656 - 56030597
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| ||| ||| ||||||||| ||||||| ||||||||||||| ||||    
T  56030656 ctaattctacccaaag-ctccaatctcttcccgtaaccaagaaactcaatcctaatagtgt 56030597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 3760091 - 3760040
Alignment:
Q  267 tgttgccaagaaaattatctacaaaccctagttttattgttggcttctaatc 318  Q
    ||||| ||||| |||||||||||||||||| |||| |||||||||| |||||    
T  3760091 tgttgtcaagataattatctacaaaccctatttttgttgttggcttttaatc 3760040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 23001618 - 23001655
Alignment:
Q  284 tctacaaaccctagttttattgttggcttctaatcctt 321  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  23001618 tctataaaccctagttttatggttggcttctaatcctt 23001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 44599958 - 44600018
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  44599958 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagactccaatcctaatagtgt 44600018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 14633530 - 14633472
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| |||||| || ||||||||||||||||||||| ||||    
T  14633530 ctaattctacccaaagtccc-aatctcttcc-gtaaccaagagactcaatcctaatagtgt 14633472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16453521 - 16453462
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||| |||||||||||| | ||| ||||| ||| ||||||||||||||||||||| ||||    
T  16453521 ctaatactacccaaagtccc-aatctcttctcgtaaccaagagactcaatcctaatagtgt 16453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 17662366 - 17662425
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | | | |||||| || ||||||||||||||||||||| ||||    
T  17662366 ctaattctacccaaagtccc-agtctcttcctgtaaccaagagactcaatcctaatagtgt 17662425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 22800983 - 22801042
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| | ||||||||||||||||||| ||||    
T  22800983 ctaattctacccaaagtctc-agcctcttcccgtaatcaagagactcaatcctaatagtgt 22801042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 33415609 - 33415668
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||||||| ||| |||| ||||    
T  33415609 ctaattctacccaaagcctc-aatctcttcccgtaaccaagagactcgatcttaatagtgt 33415668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 37313187 - 37313246
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| || | ||| |||| |||| ||||||||||||||||||||| ||||    
T  37313187 ctaattctacccaaaatccc-aatctctttccgtaaccaagagactcaatcctaatagtgt 37313246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 38928298 - 38928357
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||| | | ||| | ||||||| ||||||||||||||||||||| ||||    
T  38928298 ctaattctacccaaagcccc-aatcttttcccgtaaccaagagactcaatcctaatagtgt 38928357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 57464 - 57622
Alignment:
Q  86 ggggagagagtaactctctgttccactataatttacgagtaactttacaaag--gatttcaaagggttacaagaatcaatcttcaaatctaattctaccc 183  Q
    |||||||||| | |||||||||||| |||| || | |||||||||||||||   ||| ||||||||||||||||||  ||||||||| ||||||| ||||    
T  57464 ggggagagagcagctctctgttccattata-ttaatgagtaactttacaaaatagatatcaaagggttacaagaatagatcttcaaacctaattccaccc 57562  T
Q  184 aaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggt 243  Q
    |||||| ||||| ||||||  ||||||||||| ||||||||||| |||| | ||||||||    
T  57563 aaagtcccgaatctcttccaatgaccaagagattcaatcctaatagtgttttttcaaggt 57622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 301
Target Start/End: Original strand, 16772 - 16901
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgtgtgttcaaggttattcaatcctaaccctagtatttgttg 271  Q
    |||||||||||||||||||| ||| ||||||||| |||||| |||||||||||||| |||| |  | ||||| | ||||||| ||||||||| |||||||    
T  16772 ctaattctacccaaagtctc-aatctcttcccgtcaccaagtgactcaatcctaatagtgtttcct-aaggtgaatcaatcccaaccctagtgtttgttg 16869  T
Q  272 ccaaga--aaattatctacaaaccctagtttt 301  Q
    ||||||  ||| | | ||||||||||||||||    
T  16870 ccaagagcaaactctatacaaaccctagtttt 16901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 10818 - 10694
Alignment:
Q  122 gagtaactttacaaaggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaagtctcgaata---tcttcccgtgaccaagagactc 218  Q
    ||||||||||||||| |||||||||||||||||||||| | |||| |||  ||| ||||||||||||||| ||||   | |||  |||| ||||||||||    
T  10818 gagtaactttacaaaagatttcaaagggttacaagaattagtctttaaacttaagtctacccaaagtctcaaataatcttttcttgtgagcaagagactc 10719  T
Q  219 aatcctaatggtgtgtgttcaaggt 243  Q
    |||  |||| |||| ||||||||||    
T  10718 aatagtaatagtgtttgttcaaggt 10694  T

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Target: scaffold0256 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 16362 - 16237
Alignment:
Q  197 tcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt-----caatcctaaccctagtatttgttgccaaga-aaattatctaca 289  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| | |     |||||| |||||||||  |||||||||||| ||||| |||| |    
T  16362 tcttcccgtgaccaagagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagt-gttgttgccaagagaaattctctata 16264  T
Q  290 aaccctagttttattgttggcttctaa 316  Q
    ||||||||||| | |||||||||||||    
T  16263 aaccctagtttgaatgttggcttctaa 16237  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 188341 - 188496
Alignment:
Q  149 gttacaagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtg-tgtgttcaaggttatt 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||| | |||||||||| | |    
T  188341 gttacaagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgttttgttcaaggtgaat 188438  T
Q  248 -----caatcctaaccctagtatttgttgccaaga-aaattatctacaaaccctagttt 300  Q
         |||||| |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  188439 caaaacaatcccaaccctagt-gttgttgccaagagaaattctctataaaccctagttt 188496  T

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Target: scaffold0224 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 15943 - 15997
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  15943 ctaattctacccaaagtccc-aatctcttcccgtgaccaagagactcaatcctaat 15997  T

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Target: scaffold0468 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1764 - 1823
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||| ||||    
T  1764 ctaattctacccaaagtccc-aatctcttcccgtgaccaagaaactcaatcctaattgtgt 1823  T

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Target: scaffold0154 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 11594 - 11653
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  11594 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactcaatcctaatagtgt 11653  T

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Target: scaffold0131 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 15185 - 15127
Alignment:
Q  173 taattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| |||| |||| |||| ||||||||||||||||||||| ||||    
T  15185 taattctacccaaagtct-gaatctctttccgtaaccaagagactcaatcctaatagtgt 15127  T

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Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 14503 - 14562
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||||| |   ||||||||| ||||||||||| ||||||||| ||||    
T  14503 ctaattctacccaaagtctc-agcctcttcccgtaaccaagagactaaatcctaatagtgt 14562  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 224898 - 224821
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   ||||||||||||||||||||||||||||||| ||||    
T  224898 caagaatcagtcttcaaacctaattctacccaa-gtccc-agcctcttcccgtgaccaagagactcaatcctaatagtgt 224821  T

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Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 17089 - 17161
Alignment:
Q  153 caagaatcaatcttcaaatctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaat 227  Q
    ||||||||| |||||||| |||||||||||||| ||| | |   |||||||||||||||||||||||||||||||    
T  17089 caagaatcagtcttcaaacctaattctacccaa-gtc-ctagcttcttcccgtgaccaagagactcaatcctaat 17161  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 69412 - 69471
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||| ||||    
T  69412 ctaattctacccaaagtccc-aacctcttcccgtaaccaagagactcaatcctaatagtgt 69471  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 52178 - 52119
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||| |||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  52178 ctaattctatccaaagtcac-aatctcttcccgtaaccaagagactcaatcctaatagtgt 52119  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 183762 - 183820
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| |||||| || ||||||||||||||||||||| ||||    
T  183762 ctaattctacccaaagtccc-aatctcttcc-gtaaccaagagactcaatcctaatagtgt 183820  T

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Target: scaffold0472 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6367 - 6307
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagac-tcaatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||| ||||||||||| ||||    
T  6367 ctaattctacccaaagtc-ccaatctcttcccgtaaccaagagacttcaatcctaatagtgt 6307  T

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Target: scaffold0267 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 209 - 149
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||||| ||| ||||| ||| ||||||||||| |||||||||| ||||    
T  209 ctaattctacccaaagtctc-aatctcttcacgtaaccaagagactccaatcctaatagtgt 149  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 22284 - 22224
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  22284 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 22224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24559 - 24499
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagact-caatcctaatggtgt 232  Q
    |||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||| ||||    
T  24559 ctaattctacccaaagtccc-aatctcttcccgtaaccaagagactccaatcctaatagtgt 24499  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 79352 - 79293
Alignment:
Q  172 ctaattctacccaaagtctcgaatatcttcccgtgaccaagagactcaatcctaatggtgt 232  Q
    ||||||||||||||| |||| |   ||||||||| ||||||||||||||||||||| ||||    
T  79352 ctaattctacccaaattctc-agcctcttcccgtaaccaagagactcaatcctaatagtgt 79293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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