View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19301_high_45 (Length: 244)
Name: NF19301_high_45
Description: NF19301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19301_high_45 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 18132859 - 18132642
Alignment:
| Q |
18 |
actaaaagccaataaataatgcgaacttatcacataagctcgatatataataaattgtcttagtgattgtcaattagaaatccatatggcaatttctaaa |
117 |
Q |
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| T |
18132859 |
actaaaagccaataaataatgcgaacttatcacataagctcgatatataataaattgtcttagtgattgtcaattagaaatccatatggcaattactaaa |
18132760 |
T |
|
| Q |
118 |
agccaaaatgt----------acataaacaagaaaatatccatggcataaaatagcaccatagtgtcatctaaatacaccaaaatgaatagattgttcat |
207 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
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| T |
18132759 |
agccaaaatgtaccaaaattaacataaacaagaaaatatccatggcataaaatagcaacatagtgtcatctaaatacaccaaaatgaatcgattgttcat |
18132660 |
T |
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| Q |
208 |
catgacatcttctaatcc |
225 |
Q |
| |
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||||||||||||| |||| |
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| T |
18132659 |
catgacatcttcttatcc |
18132642 |
T |
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