View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19303_low_27 (Length: 299)
Name: NF19303_low_27
Description: NF19303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19303_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 289
Target Start/End: Complemental strand, 13851560 - 13851287
Alignment:
| Q |
16 |
aagacaactagaataacacagagcaatacttcgattttatcaatgaaacattatttgacattaaccaggaattttttaactctttataattttctttaag |
115 |
Q |
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| T |
13851560 |
aagacaactagaataacacagagcaatacttcgattttatcaatgaaacattatttgacattaaccaggaattttttaactctttataattttctttaag |
13851461 |
T |
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| Q |
116 |
cacagaaccactctctatacactaagccaacttaaacttgtaactattgttcaaaaacagaatttgaaaaagagtaactgaacattttggttatctaaat |
215 |
Q |
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| T |
13851460 |
cacagaaccactctctatacactaagccaacttaaacttgtaactattgttcaaaaacagaatttgaaaaagagtaactgaacattttggttatctaaat |
13851361 |
T |
|
| Q |
216 |
tctatagcaggacgatttaatcctccaaatttacgaaatgaagttgataacagaaaatcaatttagtccctttg |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13851360 |
tctatagcaggacgatttaatcctccaaatttacgaaatgaagttgataacagaaaatcaatttagtccctttg |
13851287 |
T |
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