View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19303_low_33 (Length: 251)
Name: NF19303_low_33
Description: NF19303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19303_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 12691630 - 12691860
Alignment:
| Q |
1 |
aaagggaatactatttcagcaagaacactaacagcaaatgttcatcttctatgtggtaataatttctaaactcatatttatttttgtaatgctacctaca |
100 |
Q |
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| T |
12691630 |
aaagggaatactatttcagcaagaacactaacagcaaatgttcatcttctatgtggtaataatttctaaactcatatttatttttgtcatgctacctaca |
12691729 |
T |
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| Q |
101 |
tttggtaacccttctcgaattttaaaaatgttgagacaaagatttctttttcttatttatcattcttaaacaaaacatcaacagataaagaaaaaaccag |
200 |
Q |
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| T |
12691730 |
tttggtaacccttctcgaattttaaaaatgttgaatcaaagatttctttttcttatttatc-ctcttaaacaaaacatcaacagataaagaaaaaaccag |
12691828 |
T |
|
| Q |
201 |
tgaatcaattgtttatttgttacagataatgg |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
12691829 |
tgaatcaattgtttatttgttacagataatgg |
12691860 |
T |
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