View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19305_low_51 (Length: 258)
Name: NF19305_low_51
Description: NF19305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19305_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 35108260 - 35108490
Alignment:
| Q |
18 |
aacctgaaggtattattacttttatcatatgtttgtaacattgtttatttgtggattcttaaacatttataacatgatctgctacttcaacattaggtgt |
117 |
Q |
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| T |
35108260 |
aacctgaaggtattattacttttatcatatgtttgaaacattgtttatttgtggattcttaaacatttataacatgatctgctacttcaacattaggtgt |
35108359 |
T |
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| Q |
118 |
tgaaaaaagaataagctaaaggggttggcttttcttgaaataaaaagatcaatagcacatttactctgcatgttctaaatgtcattttgttatttaaatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
35108360 |
tgaaaaaagaataagctaaaggggttggcttttcttgaaataaaaagatcaatagcacatttactctgcatgttgtaaatgtcattttgttatttaaatg |
35108459 |
T |
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| Q |
218 |
cacaagtattaatatattcttcttctcactc |
248 |
Q |
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|||||||||||||||||||||||||| |||| |
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| T |
35108460 |
cacaagtattaatatattcttcttcttactc |
35108490 |
T |
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