View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19307_high_36 (Length: 227)
Name: NF19307_high_36
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_high_36 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 26901752 - 26901973
Alignment:
| Q |
1 |
catacacaatcataattccgcaaaaacacaattaatcataagttaattatcgtcatcatcatcatttagtaaattaattttagttactgttgaattttaa |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26901752 |
catacacaatcataatcccgcaaaaacacaattattcataagttaattatcgtcatcatcatcatttagtaaattaattttagttactgttgaattttaa |
26901851 |
T |
|
| Q |
101 |
catgataatagcagaattaaattacagttaattattgacgaaagtagttagttagttatcaggtacggcggcggatcctcaccggagatttgtagaaatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26901852 |
catgataatagcagaattaaattacagttaattattgacgaaagtagttagttagttatccggtacggcggcggatcctcaccggagatttgtagaaatg |
26901951 |
T |
|
| Q |
201 |
catgatcgacggactgagatat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
26901952 |
catgatcgacggactgagatat |
26901973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University