View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19307_high_6 (Length: 465)
Name: NF19307_high_6
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 16 - 455
Target Start/End: Original strand, 36344064 - 36344503
Alignment:
| Q |
16 |
aaatgaagacatataaaagacaataatgctgccagaaaatagcatggaaactttcaagaccaaaaacaaacaaaatcactaatattcttagcggtcaatg |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36344064 |
aaatgaagacatataaaagacaataatgctgccagaaaatagcatggaaactttcaagaccaaaaacaaacaaaatcactaatattcttagcggtcaatg |
36344163 |
T |
|
| Q |
116 |
tcacaagcagattgaaacattaacatgtgacatcaaaaaggacaaacttgggatgataaatcaaaatatattttgtgactattgcaactattgcaatcca |
215 |
Q |
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| T |
36344164 |
tcacaagcagattgaaacattaacatgtgacatcaaaaaggacaaacttgggatgataaatcaaaatatattttgtgactattgcaactattgcaatcca |
36344263 |
T |
|
| Q |
216 |
agagccccctatccccgctgacaagcttagattcctcgcagttacgataacccctctttatttagtcacataatcttattcgtttaatcttaatcggatg |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36344264 |
agagccccctatccccgctgacaagcttagattcctcgcagttacgataacccctctttatttagtcacataatcttagtcgtttaatcttaatcggatg |
36344363 |
T |
|
| Q |
316 |
gctctaaaacataatatttagtcgtttaatcttaatcggatgactctaaaacataccatcaaaatgtgaaacatctaaatataaccggattgtccaaatt |
415 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
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| T |
36344364 |
gctctaaaacataatatttagtcgtttaatcttaataggatgactctaaaacataccattaaaatgtgaaacgtctaaatataaccggattgtccaaatt |
36344463 |
T |
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| Q |
416 |
cgcaacagcgtgattcaatgagtgtaagctattccctttg |
455 |
Q |
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| T |
36344464 |
cgcaacagcgtgattgaatgagtttaagctattccctttg |
36344503 |
T |
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