View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19307_high_7 (Length: 462)
Name: NF19307_high_7
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 1 - 447
Target Start/End: Original strand, 38513979 - 38514425
Alignment:
| Q |
1 |
ctcccttcaaaaggaaagcgactccagatggaataaaatcacgaataaagacttggtcataattcaaaacattggtactgtttggatcctttgcagcaat |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38513979 |
ctcccttcaataggaaagcgactccagatggaataaaatcacgaataaagacctggtcataattcaaaacattggtactgtttggatcctttgcagcaat |
38514078 |
T |
|
| Q |
101 |
agttccaataggattcccacaataattaactacagactccctcagtagatcccacgcttcttcctcaatagagttgaggctaattgtaccaagatttttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38514079 |
agttccaataggattcccacaataattaactacagactccctcagtagatcccatgcttcttcctcaatagagttgaggctaattgtaccaagatttttc |
38514178 |
T |
|
| Q |
201 |
gtgacagtcccatttgtaacattagatgacaaaacctctttttcctgttccaacagttgaacatcttcaaactctaaagaagactttgcactcatcacat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38514179 |
gtgacagtcccatttgtaacattagatgacaaaacctctttttcctgttccaacagttgaacatcttcaaactctaaagaagactttgcactcatcacat |
38514278 |
T |
|
| Q |
301 |
tgctaaccagactagatttttcaacatcactcgcaaacctagatccattaccgtctcctgaagttatgccactcacattttcagccttttggcatttaca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38514279 |
tgctaaccagactagatttttcaacatcactcgcaaacctagatccattaccgtctcctgaagttatgccactcacattttcagccttttggcatttaca |
38514378 |
T |
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| Q |
401 |
tgtctgcaaccatggatgactataggtcttatagtcacagaaactga |
447 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38514379 |
tgtctgcaaccatggatgactataggtcttatagtcacagaaactga |
38514425 |
T |
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