View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19307_low_12 (Length: 414)
Name: NF19307_low_12
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 393
Target Start/End: Original strand, 36866415 - 36866807
Alignment:
| Q |
1 |
ccacttaacaaaatcattagtagtaatgaactaactcttctcatcgcataaagaacacctcgaaagctgttgtattcgtttaaatttgattccaaagaca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36866415 |
ccacttaacaaaatcattagtagtaatgaactaactcttctcatcgcgtaaagaacacctcgaaagctgttgtattcgtttaaatttgattccaaagaca |
36866514 |
T |
|
| Q |
101 |
tgttctggtttagactttgagacaatgcttgaattcttgtttccatcatgcttttattttcttcttccattcctataatctccctttgacaaatgttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36866515 |
tgttctggtttagactttgagacaatgcttgaattcttgtttccatcatgcttttattttcttcttccattcctataatctccctttgacaaatgttcat |
36866614 |
T |
|
| Q |
201 |
tgctctaataacctgcatataaaatatgtatgtatgttagacatgttgaataaacttgattgagtttttccaatacataaagcttttaaaagaatttgta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36866615 |
tgctctaataacctgcatataaaatatgtatgtatgttagacatgttgaataaacttgattgagtttttccaatacataaagcttttaaaagaatttgta |
36866714 |
T |
|
| Q |
301 |
acaaaaaacaaaagcttttgacagaactttggagcataattttatacctctaaaaaagggatttggattgaccaaagtcacaatccggtcagt |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36866715 |
acaaaaaacaaaagcttttgacagaactttggagcataattttatacctctaaaaaagggatttggattgaccaaagtcacaatccggtcagt |
36866807 |
T |
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