View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19307_low_29 (Length: 254)
Name: NF19307_low_29
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 9567654 - 9567888
Alignment:
| Q |
1 |
gttctgctgatagagaacgataatgattgttgtttatgtttggaacaattttcaagcatcagtccaccgtagatcatatgacacaattccatacaataga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
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| T |
9567654 |
gttctgctgatagagaacgataatgattgttgtttacgtttggaacaattttcaagcatcggtccaccgtagatcatgtgacacaattccatacaataga |
9567753 |
T |
|
| Q |
101 |
agagcttactaccagcctctacaagtgtaataatatgcataaaaactgtattgtaactggtctggcaacttaaagtgcatgtttgtgttgagaccatcgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9567754 |
agagcttactaccagcctctacaagtgtaataatatgcataaaaactgtattgtaactggtctggcaacttaaagtgcatgtttgtgttgagaccatcgt |
9567853 |
T |
|
| Q |
201 |
aacataattcctgcactaggcagagaattgcaaac |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
9567854 |
aacataattcctgcactaggcagagaattgcaaac |
9567888 |
T |
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