View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19307_low_30 (Length: 254)
Name: NF19307_low_30
Description: NF19307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19307_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 2608006 - 2608137
Alignment:
| Q |
116 |
tcatacacgaataaaacctctaaaaaacacacccaaagatgatttcaaatttaaaagaaaatagatgaagaagcaagagttggatgaacaagtattcctc |
215 |
Q |
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| T |
2608006 |
tcatacacaaataaaacctctcaaaaacacacctaaatatcatttctaatttaaaagaaaatagatgatgaagcaagagttggatgaacaagtattcctc |
2608105 |
T |
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| Q |
216 |
ttataggacaattaagcacttttttccctttg |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
2608106 |
ttataggacaattaagcacttttttccctttg |
2608137 |
T |
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