View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1930_low_13 (Length: 243)
Name: NF1930_low_13
Description: NF1930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1930_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 29207335 - 29207461
Alignment:
| Q |
24 |
aatatattataatagatatagatgttgatcataacaattaacaattcataacaattaacaatcgatctgccttcaacaatnnnnnnnnncaattaacaat |
123 |
Q |
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| T |
29207335 |
aatatattataatagatacagatgttgatcataataattaataattcataacaattaacaatcgatctgccttcaacaataaaa------aaaacacaat |
29207428 |
T |
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| Q |
124 |
tgatctagagcctacagcatgatcctcgtggcc |
156 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
29207429 |
tgatctagagcctacagcatgatcctcgtggcc |
29207461 |
T |
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