View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19311_low_3 (Length: 259)
Name: NF19311_low_3
Description: NF19311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19311_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 11613443 - 11613215
Alignment:
| Q |
18 |
atattcagcaatccaaacttaaccacctatatctgtgacatgtaaaatcaatgacaaaggaacaaatgcacaagtcagaaaaccatgaaatcaatgaaat |
117 |
Q |
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| T |
11613443 |
atattcagcaatccaaacttaaccacctatctctgtgacatgtaaaatcaatgacaaaggaacaaatgcacaagtcagaaaaccatgaaatcaatgaaat |
11613344 |
T |
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| Q |
118 |
ccaatatgcaggcacaaacaagagtgtcaagaagtgcttaaaatttaaccatataatcaatgacagcagtttgataaaattagccacaaatcgtacaaat |
217 |
Q |
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| T |
11613343 |
ccaatatgcaggcacaaacaagagtgtcaagaagtgcttaaaatttaaccatataatcaatgacagcagtttgataaaattagccacaaatcgtacaaat |
11613244 |
T |
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| Q |
218 |
aaaaactgaaaagatagaacaaataaagt |
246 |
Q |
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| T |
11613243 |
aaaaactgaaaagatagaacaaataaagt |
11613215 |
T |
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