View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19311_low_6 (Length: 222)
Name: NF19311_low_6
Description: NF19311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19311_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11613647 - 11613426
Alignment:
| Q |
1 |
gcttgattgaaacgatgaattggtattcggtggacgaataccaggcgaattatgcaactcatgttggtttccagaaccaggtaatcctctctgcataaag |
100 |
Q |
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| T |
11613647 |
gcttgattgaaacgatgaattggtattcagtggacgaataccaggcgaattatgcaactcatgttggtttccagaaccaggtaatcctctctgcataaag |
11613548 |
T |
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| Q |
101 |
tatgatgcagaaccggataatgccgccatttggtcccctcgatccatgcatttaaattcaagtcccttcacaatctttgacaaccaaaattaaacttccc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
11613547 |
tatgatgcagaaccggataatgccgccatttggtcccctcgatccatgcatttaaattcaagtcccttcacaatctttgacaaccaaaattgaacttccc |
11613448 |
T |
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| Q |
201 |
tttaatattcagcaatccaaac |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
11613447 |
tttaatattcagcaatccaaac |
11613426 |
T |
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