View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19313_low_4 (Length: 322)

Name: NF19313_low_4
Description: NF19313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19313_low_4
NF19313_low_4
[»] chr2 (38 HSPs)
chr2 (63-239)||(28652593-28652770)
chr2 (171-282)||(21335265-21335376)
chr2 (171-282)||(21315475-21315586)
chr2 (70-295)||(149487-149718)
chr2 (171-295)||(21369235-21369359)
chr2 (171-282)||(23610568-23610679)
chr2 (218-309)||(34491212-34491303)
chr2 (251-309)||(357903-357961)
chr2 (251-309)||(21080941-21080999)
chr2 (88-282)||(23801351-23801549)
chr2 (70-163)||(1383771-1383864)
chr2 (100-282)||(45535796-45535978)
chr2 (251-309)||(21915646-21915704)
chr2 (251-309)||(25184211-25184269)
chr2 (263-309)||(34858164-34858210)
chr2 (263-309)||(34873226-34873272)
chr2 (229-306)||(40912320-40912397)
chr2 (70-241)||(19647074-19647246)
chr2 (175-282)||(28344987-28345092)
chr2 (256-309)||(27484461-27484514)
chr2 (61-156)||(25184020-25184115)
chr2 (71-128)||(14183620-14183677)
chr2 (72-156)||(14179854-14179938)
chr2 (186-282)||(20005970-20006065)
chr2 (100-156)||(45535666-45535722)
chr2 (100-163)||(12626551-12626614)
chr2 (186-241)||(25584302-25584357)
chr2 (229-295)||(17307486-17307552)
chr2 (70-156)||(21915464-21915550)
chr2 (276-309)||(18240824-18240857)
chr2 (229-282)||(24516186-24516239)
chr2 (70-159)||(28345159-28345248)
chr2 (229-281)||(5031129-5031181)
chr2 (99-151)||(18388368-18388420)
chr2 (251-295)||(22501993-22502037)
chr2 (251-295)||(22509927-22509971)
chr2 (229-281)||(24780840-24780892)
chr2 (218-282)||(36734450-36734512)
[»] chr1 (40 HSPs)
chr1 (55-281)||(22145666-22145896)
chr1 (70-295)||(8306444-8306672)
chr1 (171-282)||(28476733-28476844)
chr1 (176-309)||(24007197-24007330)
chr1 (171-282)||(12710809-12710920)
chr1 (191-282)||(38056671-38056762)
chr1 (198-282)||(50544841-50544925)
chr1 (175-278)||(24719514-24719616)
chr1 (61-163)||(17901921-17902023)
chr1 (73-163)||(21239162-21239252)
chr1 (203-292)||(17901783-17901872)
chr1 (126-282)||(34392662-34392821)
chr1 (191-282)||(8275988-8276079)
chr1 (70-163)||(6834006-6834102)
chr1 (218-309)||(12327715-12327806)
chr1 (100-282)||(21188033-21188215)
chr1 (218-309)||(51336468-51336559)
chr1 (251-309)||(29763604-29763662)
chr1 (251-309)||(50001498-50001556)
chr1 (76-163)||(35894945-35895032)
chr1 (218-292)||(6834165-6834239)
chr1 (93-163)||(7052132-7052202)
chr1 (126-235)||(40390047-40390157)
chr1 (251-309)||(46197717-46197775)
chr1 (221-282)||(635003-635064)
chr1 (70-163)||(24723579-24723672)
chr1 (170-281)||(20588576-20588690)
chr1 (170-281)||(20593114-20593228)
chr1 (86-156)||(21243863-21243933)
chr1 (263-309)||(21995636-21995682)
chr1 (218-282)||(35895088-35895152)
chr1 (186-282)||(39061278-39061373)
chr1 (218-282)||(45499531-45499595)
chr1 (227-282)||(7703121-7703175)
chr1 (218-281)||(16401902-16401963)
chr1 (61-156)||(46197871-46197966)
chr1 (100-163)||(44822249-44822312)
chr1 (62-155)||(38056800-38056893)
chr1 (229-281)||(19676711-19676763)
chr1 (229-281)||(21046049-21046101)
[»] chr6 (29 HSPs)
chr6 (63-239)||(25601371-25601545)
chr6 (186-282)||(21683074-21683169)
chr6 (191-295)||(19825472-19825576)
chr6 (171-282)||(15998831-15998942)
chr6 (172-281)||(20410512-20410619)
chr6 (218-292)||(29045260-29045334)
chr6 (209-282)||(23658069-23658142)
chr6 (70-163)||(29045104-29045197)
chr6 (187-282)||(34140455-34140548)
chr6 (196-282)||(18982539-18982625)
chr6 (229-309)||(27329953-27330033)
chr6 (229-309)||(27390693-27390773)
chr6 (61-156)||(25921833-25921927)
chr6 (187-282)||(34153071-34153164)
chr6 (175-282)||(10446162-10446270)
chr6 (251-309)||(15173425-15173483)
chr6 (263-309)||(28103420-28103466)
chr6 (100-282)||(1818822-1819005)
chr6 (251-309)||(15900626-15900684)
chr6 (132-241)||(24506155-24506265)
chr6 (263-309)||(27852240-27852286)
chr6 (263-309)||(20733216-20733262)
chr6 (229-282)||(30673401-30673454)
chr6 (62-118)||(12942963-12943019)
chr6 (229-282)||(15890711-15890764)
chr6 (70-163)||(35057384-35057477)
chr6 (229-281)||(7827972-7828024)
chr6 (229-281)||(23150287-23150339)
chr6 (62-118)||(28288669-28288725)
[»] scaffold0125 (1 HSPs)
scaffold0125 (74-282)||(28396-28604)
[»] chr3 (56 HSPs)
chr3 (70-295)||(50350802-50351029)
chr3 (171-282)||(17208466-17208577)
chr3 (175-282)||(14520392-14520499)
chr3 (71-282)||(29907477-29907692)
chr3 (71-282)||(29948643-29948858)
chr3 (71-282)||(29997797-29998012)
chr3 (191-295)||(14641534-14641638)
chr3 (70-282)||(3527156-3527368)
chr3 (209-282)||(14152398-14152471)
chr3 (209-281)||(5215627-5215699)
chr3 (218-282)||(22841278-22841342)
chr3 (170-281)||(54875474-54875586)
chr3 (70-163)||(6805046-6805139)
chr3 (229-309)||(24177708-24177788)
chr3 (218-274)||(45803338-45803394)
chr3 (170-282)||(6156651-6156763)
chr3 (170-281)||(17684835-17684947)
chr3 (251-309)||(36528889-36528947)
chr3 (170-295)||(6159345-6159471)
chr3 (100-282)||(3160626-3160808)
chr3 (170-282)||(14442115-14442228)
chr3 (251-309)||(15446840-15446898)
chr3 (170-281)||(17669698-17669810)
chr3 (263-309)||(37641476-37641522)
chr3 (209-270)||(2247877-2247938)
chr3 (209-282)||(15566724-15566797)
chr3 (181-282)||(2841505-2841607)
chr3 (218-282)||(12917305-12917369)
chr3 (80-152)||(12917443-12917515)
chr3 (251-306)||(16979934-16979989)
chr3 (251-309)||(3263935-3263993)
chr3 (263-309)||(14967218-14967264)
chr3 (263-307)||(52465345-52465389)
chr3 (70-282)||(48631172-48631384)
chr3 (263-309)||(52988830-52988876)
chr3 (62-163)||(45803456-45803557)
chr3 (100-156)||(13522474-13522530)
chr3 (269-309)||(31223824-31223864)
chr3 (171-282)||(24547142-24547253)
chr3 (181-282)||(21845651-21845751)
chr3 (218-282)||(25202125-25202187)
chr3 (218-282)||(48043477-48043539)
chr3 (176-269)||(50755266-50755360)
chr3 (62-118)||(54521596-54521652)
chr3 (219-282)||(24548953-24549016)
chr3 (71-156)||(16979753-16979838)
chr3 (229-282)||(40807996-40808049)
chr3 (229-282)||(44274418-44274471)
chr3 (62-118)||(3803647-3803703)
chr3 (62-118)||(12305896-12305952)
chr3 (218-282)||(16050916-16050980)
chr3 (229-281)||(17044966-17045018)
chr3 (229-281)||(17047126-17047178)
chr3 (229-281)||(17541434-17541486)
chr3 (229-281)||(22306583-22306635)
chr3 (9-45)||(24177969-24178005)
[»] scaffold1186 (1 HSPs)
scaffold1186 (171-282)||(1962-2073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (171-282)||(186195-186306)
[»] chr4 (41 HSPs)
chr4 (171-282)||(14631077-14631188)
chr4 (171-282)||(25513793-25513904)
chr4 (171-282)||(26446149-26446260)
chr4 (188-282)||(16296897-16296991)
chr4 (126-282)||(15239815-15239972)
chr4 (188-275)||(35660915-35661002)
chr4 (70-239)||(26921550-26921715)
chr4 (100-282)||(9622357-9622542)
chr4 (191-282)||(9638972-9639063)
chr4 (171-282)||(2424386-2424497)
chr4 (213-281)||(33186887-33186955)
chr4 (209-281)||(12424290-12424364)
chr4 (100-282)||(14477502-14477684)
chr4 (170-282)||(55583136-55583249)
chr4 (251-309)||(15008985-15009043)
chr4 (70-209)||(16296711-16296852)
chr4 (251-309)||(14186980-14187038)
chr4 (251-309)||(40620554-40620612)
chr4 (152-239)||(45314124-45314212)
chr4 (263-309)||(10057695-10057741)
chr4 (126-235)||(20150722-20150832)
chr4 (221-282)||(13847193-13847254)
chr4 (70-163)||(14549490-14549583)
chr4 (70-163)||(19434778-19434871)
chr4 (70-163)||(35660728-35660821)
chr4 (218-282)||(10273372-10273436)
chr4 (61-156)||(10694371-10694466)
chr4 (209-267)||(15747787-15747845)
chr4 (209-270)||(17143002-17143063)
chr4 (103-282)||(18462896-18463076)
chr4 (93-156)||(54798029-54798092)
chr4 (62-155)||(9638841-9638934)
chr4 (209-282)||(12623297-12623369)
chr4 (229-282)||(15115222-15115275)
chr4 (228-281)||(35811376-35811429)
chr4 (126-198)||(3838027-3838099)
chr4 (229-281)||(11425943-11425995)
chr4 (229-281)||(25091653-25091705)
chr4 (62-118)||(36038644-36038700)
chr4 (62-118)||(49547106-49547162)
chr4 (229-281)||(53630474-53630526)
[»] chr8 (40 HSPs)
chr8 (171-281)||(18816295-18816405)
chr8 (176-309)||(12577826-12577959)
chr8 (171-281)||(21514633-21514743)
chr8 (187-282)||(36732411-36732506)
chr8 (171-282)||(4380616-4380727)
chr8 (209-295)||(22208249-22208335)
chr8 (100-282)||(21676592-21676773)
chr8 (100-282)||(22610266-22610448)
chr8 (170-282)||(21399657-21399770)
chr8 (170-282)||(21794150-21794263)
chr8 (218-277)||(22483775-22483834)
chr8 (251-309)||(19880844-19880902)
chr8 (251-309)||(23479104-23479162)
chr8 (131-282)||(21678845-21678995)
chr8 (196-282)||(21676499-21676583)
chr8 (251-308)||(17158936-17158993)
chr8 (209-281)||(22258306-22258378)
chr8 (218-282)||(22345153-22345217)
chr8 (218-282)||(22356813-22356877)
chr8 (170-281)||(18834366-18834474)
chr8 (251-309)||(26454730-26454788)
chr8 (209-270)||(18023567-18023628)
chr8 (209-270)||(38184923-38184984)
chr8 (209-309)||(41680105-41680204)
chr8 (251-309)||(16198858-16198916)
chr8 (126-231)||(21697509-21697615)
chr8 (126-235)||(22966707-22966817)
chr8 (266-307)||(22237024-22237065)
chr8 (61-156)||(12037290-12037385)
chr8 (100-163)||(20879343-20879406)
chr8 (175-282)||(23884116-23884222)
chr8 (218-282)||(22483927-22483990)
chr8 (219-295)||(36305988-36306063)
chr8 (61-156)||(25657640-25657735)
chr8 (70-163)||(22483620-22483713)
chr8 (61-156)||(16198667-16198762)
chr8 (100-163)||(20517175-20517238)
chr8 (100-163)||(22344993-22345056)
chr8 (100-163)||(22356653-22356716)
chr8 (251-295)||(20022026-20022070)
[»] chr7 (60 HSPs)
chr7 (171-282)||(15575648-15575759)
chr7 (171-282)||(43745598-43745709)
chr7 (187-282)||(708428-708523)
chr7 (175-282)||(47095398-47095505)
chr7 (61-282)||(13315081-13315302)
chr7 (187-295)||(19195570-19195677)
chr7 (171-282)||(20252181-20252292)
chr7 (171-282)||(18874664-18874774)
chr7 (209-282)||(8513752-8513825)
chr7 (71-163)||(19282887-19282979)
chr7 (171-282)||(4690662-4690773)
chr7 (219-282)||(38299738-38299801)
chr7 (209-282)||(8488093-8488166)
chr7 (218-282)||(16250221-16250285)
chr7 (171-282)||(48212726-48212839)
chr7 (170-295)||(58399-58522)
chr7 (209-281)||(43276744-43276815)
chr7 (71-163)||(47975010-47975102)
chr7 (218-281)||(25943256-25943319)
chr7 (170-281)||(15720719-15720831)
chr7 (70-163)||(12754784-12754877)
chr7 (70-155)||(38295442-38295527)
chr7 (126-282)||(36300640-36300796)
chr7 (175-282)||(8930764-8930872)
chr7 (251-309)||(16549977-16550035)
chr7 (251-309)||(16615627-16615685)
chr7 (263-309)||(19485945-19485991)
chr7 (251-309)||(29052154-29052212)
chr7 (266-311)||(46579729-46579774)
chr7 (218-282)||(13744509-13744573)
chr7 (218-282)||(33556104-33556168)
chr7 (175-282)||(15700734-15700840)
chr7 (228-282)||(3287743-3287797)
chr7 (175-282)||(18570592-18570700)
chr7 (263-309)||(30820123-30820169)
chr7 (100-241)||(42565872-42566014)
chr7 (224-281)||(19283051-19283108)
chr7 (70-163)||(708640-708733)
chr7 (171-244)||(16186855-16186928)
chr7 (209-270)||(34958325-34958386)
chr7 (61-156)||(16550128-16550223)
chr7 (61-156)||(16615439-16615534)
chr7 (93-163)||(14274086-14274156)
chr7 (209-270)||(831861-831922)
chr7 (209-270)||(1197041-1197102)
chr7 (268-309)||(36685118-36685159)
chr7 (213-277)||(15700887-15700951)
chr7 (72-156)||(32160326-32160410)
chr7 (229-295)||(12127149-12127215)
chr7 (70-156)||(19195032-19195118)
chr7 (229-282)||(20214147-20214200)
chr7 (229-282)||(20586352-20586405)
chr7 (99-156)||(48274353-48274410)
chr7 (229-281)||(8851159-8851211)
chr7 (229-281)||(12372274-12372326)
chr7 (229-281)||(12465260-12465312)
chr7 (251-295)||(13147458-13147502)
chr7 (62-118)||(16108021-16108077)
chr7 (62-118)||(23664285-23664341)
chr7 (99-163)||(37539317-37539381)
[»] chr5 (34 HSPs)
chr5 (171-282)||(18744816-18744927)
chr5 (171-281)||(23199207-23199317)
chr5 (187-282)||(16063709-16063804)
chr5 (70-277)||(21398800-21399010)
chr5 (171-282)||(660732-660841)
chr5 (171-277)||(1627071-1627178)
chr5 (187-282)||(6551289-6551384)
chr5 (251-307)||(17011750-17011806)
chr5 (181-282)||(32607315-32607417)
chr5 (251-309)||(31456982-31457040)
chr5 (70-163)||(36508862-36508955)
chr5 (263-309)||(10774636-10774682)
chr5 (126-235)||(24068126-24068236)
chr5 (70-233)||(21503979-21504144)
chr5 (175-295)||(21398630-21398752)
chr5 (218-309)||(30616603-30616694)
chr5 (263-309)||(21554275-21554321)
chr5 (263-309)||(21556921-21556967)
chr5 (251-309)||(29448862-29448920)
chr5 (218-282)||(20313266-20313328)
chr5 (117-157)||(31621859-31621899)
chr5 (61-156)||(17011559-17011654)
chr5 (100-163)||(17875927-17875990)
chr5 (266-309)||(26832658-26832701)
chr5 (70-156)||(265878-265964)
chr5 (218-276)||(31621965-31622023)
chr5 (229-282)||(21300043-21300096)
chr5 (276-309)||(22240891-22240924)
chr5 (276-309)||(22241887-22241920)
chr5 (276-309)||(22242883-22242916)
chr5 (276-309)||(22243879-22243912)
chr5 (229-282)||(31622117-31622170)
chr5 (229-277)||(22111828-22111876)
chr5 (72-156)||(29448682-29448766)
[»] scaffold0505 (1 HSPs)
scaffold0505 (126-281)||(4832-4988)
[»] scaffold0878 (1 HSPs)
scaffold0878 (175-282)||(3421-3528)
[»] scaffold0676 (2 HSPs)
scaffold0676 (187-282)||(2839-2934)
scaffold0676 (70-163)||(2654-2747)
[»] scaffold0056 (1 HSPs)
scaffold0056 (171-282)||(18217-18328)
[»] scaffold0139 (2 HSPs)
scaffold0139 (61-309)||(23377-23614)
scaffold0139 (186-282)||(40160-40258)
[»] scaffold0231 (1 HSPs)
scaffold0231 (175-282)||(17520-17627)
[»] scaffold0247 (1 HSPs)
scaffold0247 (175-281)||(1022-1128)
[»] scaffold0017 (2 HSPs)
scaffold0017 (152-278)||(26650-26776)
scaffold0017 (93-282)||(23476-23666)
[»] scaffold0061 (2 HSPs)
scaffold0061 (62-282)||(14585-14806)
scaffold0061 (62-282)||(23643-23864)
[»] scaffold0261 (1 HSPs)
scaffold0261 (70-231)||(6468-6627)
[»] scaffold0220 (1 HSPs)
scaffold0220 (191-282)||(13911-14002)
[»] scaffold0853 (1 HSPs)
scaffold0853 (171-281)||(2454-2566)
[»] scaffold0328 (1 HSPs)
scaffold0328 (191-295)||(18626-18731)
[»] scaffold0007 (2 HSPs)
scaffold0007 (99-282)||(16418-16605)
scaffold0007 (102-282)||(18700-18885)
[»] scaffold0203 (1 HSPs)
scaffold0203 (171-295)||(17926-18050)
[»] scaffold0369 (1 HSPs)
scaffold0369 (171-282)||(15615-15725)
[»] scaffold0516 (1 HSPs)
scaffold0516 (171-282)||(5304-5415)
[»] scaffold0594 (2 HSPs)
scaffold0594 (70-163)||(2080-2173)
scaffold0594 (218-282)||(2236-2300)
[»] scaffold0148 (1 HSPs)
scaffold0148 (70-282)||(8681-8897)
[»] scaffold0213 (2 HSPs)
scaffold0213 (186-282)||(19164-19260)
scaffold0213 (186-228)||(19118-19160)
[»] scaffold0031 (1 HSPs)
scaffold0031 (100-282)||(127342-127527)
[»] scaffold0431 (1 HSPs)
scaffold0431 (209-281)||(5611-5685)
[»] scaffold0058 (2 HSPs)
scaffold0058 (100-282)||(59655-59837)
scaffold0058 (251-309)||(6390-6448)
[»] scaffold1256 (1 HSPs)
scaffold1256 (196-282)||(2199-2285)
[»] scaffold0138 (3 HSPs)
scaffold0138 (251-309)||(21119-21177)
scaffold0138 (251-309)||(34134-34192)
scaffold0138 (61-156)||(20928-21023)
[»] scaffold0004 (5 HSPs)
scaffold0004 (218-292)||(66061-66135)
scaffold0004 (70-156)||(66205-66290)
scaffold0004 (213-282)||(111344-111413)
scaffold0004 (218-282)||(75926-75990)
scaffold0004 (218-281)||(73076-73139)
[»] scaffold0149 (2 HSPs)
scaffold0149 (70-163)||(21380-21473)
scaffold0149 (251-282)||(21633-21664)
[»] scaffold0515 (1 HSPs)
scaffold0515 (251-309)||(5051-5109)
[»] scaffold0337 (1 HSPs)
scaffold0337 (93-282)||(3068-3257)
[»] scaffold0306 (1 HSPs)
scaffold0306 (251-309)||(5051-5109)
[»] scaffold0174 (4 HSPs)
scaffold0174 (220-282)||(5445-5507)
scaffold0174 (175-295)||(19801-19922)
scaffold0174 (218-281)||(11605-11668)
scaffold0174 (266-309)||(13674-13717)
[»] scaffold0120 (1 HSPs)
scaffold0120 (126-235)||(29208-29318)
[»] scaffold0057 (2 HSPs)
scaffold0057 (251-309)||(69825-69883)
scaffold0057 (61-156)||(69979-70074)
[»] scaffold0379 (1 HSPs)
scaffold0379 (175-281)||(10893-10999)
[»] scaffold0026 (2 HSPs)
scaffold0026 (70-163)||(21962-22055)
scaffold0026 (117-163)||(9912-9958)
[»] scaffold0577 (1 HSPs)
scaffold0577 (263-311)||(9093-9141)
[»] scaffold0086 (1 HSPs)
scaffold0086 (218-282)||(35185-35249)
[»] scaffold0730 (1 HSPs)
scaffold0730 (70-282)||(6504-6716)
[»] scaffold0555 (2 HSPs)
scaffold0555 (175-295)||(8732-8853)
scaffold0555 (100-163)||(8916-8979)
[»] scaffold0032 (1 HSPs)
scaffold0032 (188-295)||(61834-61940)
[»] scaffold0462 (1 HSPs)
scaffold0462 (251-309)||(11245-11303)
[»] scaffold0436 (2 HSPs)
scaffold0436 (251-309)||(8982-9040)
scaffold0436 (72-156)||(8802-8886)
[»] scaffold0071 (1 HSPs)
scaffold0071 (251-309)||(15294-15352)
[»] scaffold0046 (2 HSPs)
scaffold0046 (251-309)||(21749-21807)
scaffold0046 (61-156)||(21903-21998)
[»] scaffold0034 (2 HSPs)
scaffold0034 (251-309)||(29188-29246)
scaffold0034 (61-156)||(29342-29437)
[»] scaffold0414 (1 HSPs)
scaffold0414 (171-281)||(11160-11271)
[»] scaffold0298 (1 HSPs)
scaffold0298 (209-270)||(365-426)
[»] scaffold0108 (1 HSPs)
scaffold0108 (209-282)||(6398-6471)
[»] scaffold0217 (1 HSPs)
scaffold0217 (99-282)||(28583-28766)
[»] scaffold0153 (2 HSPs)
scaffold0153 (263-306)||(5331-5374)
scaffold0153 (263-306)||(12351-12394)
[»] scaffold0098 (1 HSPs)
scaffold0098 (170-282)||(40047-40160)
[»] scaffold0021 (2 HSPs)
scaffold0021 (100-282)||(16977-17158)
scaffold0021 (100-282)||(26508-26689)
[»] scaffold0083 (1 HSPs)
scaffold0083 (251-309)||(1959-2017)
[»] scaffold0632 (1 HSPs)
scaffold0632 (229-309)||(1165-1245)
[»] scaffold0162 (2 HSPs)
scaffold0162 (171-231)||(23932-23992)
scaffold0162 (248-280)||(23893-23925)
[»] scaffold0048 (1 HSPs)
scaffold0048 (218-282)||(68725-68789)
[»] scaffold0035 (2 HSPs)
scaffold0035 (218-282)||(43786-43848)
scaffold0035 (229-282)||(39094-39145)
[»] scaffold0819 (1 HSPs)
scaffold0819 (263-309)||(5400-5446)
[»] scaffold0104 (2 HSPs)
scaffold0104 (263-309)||(14991-15037)
scaffold0104 (263-309)||(17011-17057)
[»] scaffold0180 (1 HSPs)
scaffold0180 (209-270)||(10576-10636)
[»] scaffold0205 (1 HSPs)
scaffold0205 (218-282)||(5615-5677)
[»] scaffold0686 (1 HSPs)
scaffold0686 (266-309)||(1475-1518)
[»] scaffold0439 (1 HSPs)
scaffold0439 (93-156)||(12104-12167)
[»] scaffold0394 (1 HSPs)
scaffold0394 (100-282)||(7513-7695)
[»] scaffold0156 (1 HSPs)
scaffold0156 (263-309)||(16638-16684)
[»] scaffold1800 (1 HSPs)
scaffold1800 (70-282)||(446-660)
[»] scaffold0113 (1 HSPs)
scaffold0113 (70-162)||(35332-35424)
[»] scaffold0092 (1 HSPs)
scaffold0092 (186-282)||(38441-38536)
[»] scaffold0256 (1 HSPs)
scaffold0256 (93-152)||(1971-2030)
[»] scaffold1941 (1 HSPs)
scaffold1941 (229-282)||(138-191)
[»] scaffold0112 (1 HSPs)
scaffold0112 (229-282)||(2889-2942)
[»] scaffold0040 (1 HSPs)
scaffold0040 (70-163)||(106280-106373)
[»] scaffold1633 (1 HSPs)
scaffold1633 (229-281)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (229-281)||(468-520)
[»] scaffold0064 (1 HSPs)
scaffold0064 (251-295)||(58768-58812)
[»] scaffold0037 (1 HSPs)
scaffold0037 (251-283)||(117805-117837)
[»] scaffold0036 (1 HSPs)
scaffold0036 (229-281)||(78185-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (229-281)||(24131-24183)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 28652770 - 28652593
Alignment:
Q  63 ccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 162  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28652770 ccctaagcccaaattttatagaaaactcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaa 28652671  T
Q  163 ttgaactcaatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccctttttcaaaatta 239  Q
    || || ||||||||||| |||| ||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||    
T  28652670 ttaaattcaatctaaccctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 21335376 - 21335265
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21335376 aatctaaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21335277  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  21335276 cccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 21315586 - 21315475
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| ||||| ||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21315586 aatctaacaataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21315487  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  21315486 cccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 70 - 295
Target Start/End: Complemental strand, 149718 - 149487
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||| |||||   ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |  |    
T  149718 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattt 149619  T
Q  170 caa--tctaaccataatctctataacaccaaaactaacaaaa--actacaaggttaaaccc---tttttcaaaattatacaacccattattagagaaagc 262  Q
     ||  || |||| |||| ||||||||| ||||||||||||||  || || | |||||||||   ||||| | ||||||||||| ||||||||||||||||    
T  149618 taatttcaaaccctaatttctataacatcaaaactaacaaaacgacaac-atgttaaaccccttttttttagaattatacaactcattattagagaaagc 149520  T
Q  263 tagtcccacccttaccttagtattgatgatcgg 295  Q
    |||| |||||||||||||||  | |||||||||    
T  149519 tagttccacccttaccttagattagatgatcgg 149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 21369235 - 21369359
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  21369235 aatctaaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtccca 21369334  T
Q  271 cccttaccttagtattgatgatcgg 295  Q
    ||||||||||||  | |||||||||    
T  21369335 cccttaccttagattagatgatcgg 21369359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 23610568 - 23610679
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||| ||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  23610568 aatctaaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtccca 23610667  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  23610668 cccttaccttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 34491303 - 34491212
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattatt-agagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||| ||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34491303 gttaaaccctttttcagaattatacaactcgttatttagagaa-gctagtcccacccttaccttagtattgatgatcggcggtctctctccct 34491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 357903 - 357961
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  357903 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 357961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 21080999 - 21080941
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21080999 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 21080941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 282
Target Start/End: Original strand, 23801351 - 23801549
Alignment:
Q  88 ctcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaatct---aaccataat 184  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||| ||||||  |  | ||| |   || | ||||    
T  23801351 ctctacctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaatcaattttaattttaaaaacctaat 23801450  T
Q  185 ctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
     |||  |  | ||||| ||| |||| | ||||   ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23801451 ttctcaacaatcaaaattaataaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 23801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 1383864 - 1383771
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 45535796 - 45535978
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||| ||||||  || | |||| ||| | |||  ||||||||| ||     
T  45535796 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaatcaaattgcaatttaaacctaacttctataacaacag 45535895  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    || || ||| ||| ||||| ||||||||||||||| |||||||  || | | |||| |||| | ||||||||||||||||||||    
T  45535896 aattatcaacaacaacaagattaaaccctttttcagaattata-gactcgtgattaaagaaggttagtcccacccttaccttag 45535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 21915646 - 21915704
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  21915646 attagagaaagttagtcacacccttactttagtattgatgatcggcggtctctctccct 21915704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 25184211 - 25184269
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25184211 attagagaaagttagtctcacccttaccttagtattgatgattggcggtctctctccct 25184269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 34858210 - 34858164
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34858210 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 34858164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 34873272 - 34873226
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34873272 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 34873226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 40912320 - 40912397
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctc 306  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggttgtctctctc 40912397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 19647074 - 19647246
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||| ||||  | |||||  ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||  ||| ||||||  |  |    
T  19647074 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaatcaattt 19647173  T
Q  170 -caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattata 241  Q
     |||| ||||| |||  ||||||  | ||||||||  || ||||||||| ||||||||||||||| |||||||    
T  19647174 gcaatttaaccctaacttctatacaatcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 28345092 - 28344987
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| ||||||||| | |||||||||||| | ||| | |||||||| |||| | ||| ||||| ||||||||||||||||||||||| ||||||    
T  28345092 taaccctaatttctataacatcgaaactaacaaaa-caacatg-ttaaacccctttttagaatcatacagcccattattagagaaagctagtcacaccct 28344995  T
Q  275 taccttag 282  Q
    || |||||    
T  28344994 tatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 27484514 - 27484461
Alignment:
Q  256 agaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  27484514 agaaagttagtctcacccttaccttagtattgatgatcggtggtatctctccct 27484461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 25184020 - 25184115
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  |||||||||| |||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  25184020 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtctgaacttcaattcttatgttaattcattgaattacctactcttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 14183677 - 14183620
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattatta 128  Q
    |||||||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||||    
T  14183677 ccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattatta 14183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 14179938 - 14179854
Alignment:
Q  72 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||| |||| |||| || ||||| ||||||| |||| ||||||||||||||||| | || |||||  ||||| |||||||||    
T  14179938 caaatttgataggaaacactacctatgattattccacaacctgaacaccaattattaacctagttcatcagattatctactcttt 14179854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 20006065 - 20005970
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| ||||| ||  || ||| ||||  ||||||||||||||| ||||||| | | ||| |||| |||| ||||||||||||||||||||||    
T  20006065 tctataacatcaaaattattaacaacaacaaaattaaaccctttttcagaattataga-ctcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 45535666 - 45535722
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| ||||    
T  45535666 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacacttt 45535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 12626614 - 12626551
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| ||||| ||   ||||||||| |||||||||||||||| ||||||    
T  12626614 ttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaat 12626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 25584357 - 25584302
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattata 241  Q
    ||||||||| |||||||| ||  ||| ||||||||||||||||||||| |||||||    
T  25584357 tctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 17307486 - 17307552
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||  | |||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 17307552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 21915464 - 21915550
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    |||||||||||||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| |||||||| |||||    
T  21915464 cccaaattttataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctattcttt 21915550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 18240824 - 18240857
Alignment:
Q  276 accttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| ||||||||||||||    
T  18240824 accttagtattgatgatcgacggtctctctccct 18240857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 24516186 - 24516239
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  24516186 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 28345248 - 28345159
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaa 159  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || || | ||||| | ||| | |||||||||||||||||| |||||||    
T  28345248 cccaaatttgataggaaacttaacctatgattattctacaacctcaataacaattttcaccatgattcattggattacctacacttttaa 28345159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 18388420 - 18388368
Alignment:
Q  99 attattctacaatctgaacaccaattattaccttaattcattggattacctac 151  Q
    |||| ||||||| ||||||| ||||| |||  |||||||||||||||||||||    
T  18388420 attactctacaacctgaacatcaatttttatattaattcattggattacctac 18388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 22501993 - 22502037
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  22501993 attagagaaagttagtcccacccttaccttagattagatgatcgg 22502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 22509927 - 22509971
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  22509927 attagagaaagttagtcccacccttaccttagattagatgatcgg 22509971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 36734512 - 36734450
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||| | ||||||| ||||||||||||||||| | || |||||||||||||||||    
T  36734512 gttaaaccctattttagaattata-aacccattattagagaa-gttaatcccacccttaccttag 36734450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 281
Target Start/End: Complemental strand, 22145896 - 22145666
Alignment:
Q  55 tcataaaaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactct 154  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| |||| |||||||  |||||| |||||||||| |||||||||||||||||||||||     
T  22145896 tcatacaaccctaaccccaaattttgtagaaaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactcc 22145797  T
Q  155 tttaacaattgaactcaa---tctaaccataatctctataacac-caaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccatt 250  Q
    || ||||||| || |  |   ||||||| |||| | | |||  | |||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  22145796 ttcaacaattcaattttaatttctaaccttaatttatctaatcctcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccatt 22145697  T
Q  251 attagagaaagctagtcccacccttacctta 281  Q
    ||||||||||| |||||||||||||||||||    
T  22145696 attagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 70 - 295
Target Start/End: Original strand, 8306444 - 8306672
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||| |||||   ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |  |    
T  8306444 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattt 8306543  T
Q  170 caa--tctaaccataatctctataacaccaaaactaacaaaa--actacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctag 265  Q
     ||  || |||| |||| ||||||||| ||||||||||||||  || || | ||||||||| |||| | |||||||||||||||||||||||||||||||    
T  8306544 taatttcaaaccctaatttctataacatcaaaactaacaaaacgacaac-atgttaaacccctttttagaattatacaacccattattagagaaagctag 8306642  T
Q  266 tcccacccttaccttagtattgatgatcgg 295  Q
    |||||| ||||||||||  | |||||||||    
T  8306643 tcccactcttaccttagattagatgatcgg 8306672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 28476844 - 28476733
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  28476844 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtccca 28476745  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  28476744 cccttaccttag 28476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 24007330 - 24007197
Alignment:
Q  176 aaccataatctctataacaccaaaactaacaaaaactacaa-ggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    |||| |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaatc-attatcagagaaagctagtcccaccct 24007232  T
Q  275 taccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||| ||||||||||||||    
T  24007231 taccttagtatagatgatcgacggtctctctccct 24007197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 12710809 - 12710920
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  12710809 aatctaaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtccca 12710908  T
Q  271 cccttaccttag 282  Q
     | |||||||||    
T  12710909 tctttaccttag 12710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 38056762 - 38056671
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38056762 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  198 aaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 24719616 - 24719514
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| ||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  24719616 taaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagt-ccaccct 24719518  T
Q  275 tacc 278  Q
    ||||    
T  24719517 tacc 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 17902023 - 17901921
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaac 160  Q
    ||||| || ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||| |||    
T  17902023 aacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaac 17901924  T
Q  161 aat 163  Q
    |||    
T  17901923 aat 17901921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 21239252 - 21239162
Alignment:
Q  73 aaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  21239252 aaatttgatagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaat 21239162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 203 - 292
Target Start/End: Complemental strand, 17901872 - 17901783
Alignment:
Q  203 aacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgat 292  Q
    ||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  17901872 aacaaaaacaaccatgttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 34392662 - 34392821
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gtta 221  Q
    |||| |||||||| ||||||||||||||||| ||||||  |  |  |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||    
T  34392662 ttacgttaattcaatggattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgtta 34392760  T
Q  222 aaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  34392761 aacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 8276079 - 8275988
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||||| || ||| ||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||    
T  8276079 aacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttag 8275988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 6834006 - 6834102
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaat---tcattggattacctactcttttaacaat 163  Q
    ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |   |||| |||||||||||||||| ||||||    
T  6834006 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaat 6834102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 12327806 - 12327715
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||| || |||||| ||| |||||||  |  ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12327806 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 12327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 21188215 - 21188033
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||| ||||||  || | |||| ||| | |||  ||||||||| |||    
T  21188215 ttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaatcaaattgcaatttaaacctaacttctataacatcaa 21188116  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| ||||||||  ||||| ||||| |||||||||||  || ||| |||| | || | ||||||||||||||||||||    
T  21188115 aactatcaacaactacaaaattaaatcctttctcaaaattata-tactcatgattaaaaaaggttagtcccacccttaccttag 21188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 51336468 - 51336559
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||| || |||||| ||| |||||||  |  ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  51336468 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctccct 51336559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29763662 - 29763604
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  29763662 attagagaaagttagtcccacccttaccttagtattgatgatcgtcggtctctctccct 29763604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 50001498 - 50001556
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50001498 attaaagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 50001556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 35894945 - 35895032
Alignment:
Q  76 ttttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||||||||||||||| ||| ||||||| || | |||||||||||||||||||||| ||||| |||||||| | ||||| ||||||    
T  35894945 ttttatagaaaactcttcatatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaat 35895032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 6834165 - 6834239
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgat 292  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||| |||||| || ||||||    
T  6834165 gttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgat 6834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 7052202 - 7052132
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  7052202 cctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 40390047 - 40390157
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaa-ctaacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||| ||| ||||| ||||| |||  || ||||||||||||||||    
T  40390047 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatatctttaacatcaaaacctattaacaactacaaggttaaac 40390146  T
Q  225 cctttttcaaa 235  Q
    |||||||||||    
T  40390147 cctttttcaaa 40390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 46197775 - 46197717
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||    
T  46197775 attagagaaagttagtcccacccttaccttagtattgatgatcgacagtctctctccct 46197717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  221 aaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 24723672 - 24723579
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||||||||||||||||||||||||||   ||||| |||||||| ||||||    
T  24723672 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 20588576 - 20588690
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactaca-aggttaaaccctttttc--aaaattatacaacccattattagagaaagctagt 266  Q
    |||| ||||| |||| ||||||||| ||||||||||||||   | | | ||||||||||||||   | ||| |||||||||||||||||||||||||| |    
T  20588576 caatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaat 20588675  T
Q  267 cccacccttacctta 281  Q
    |||||||||||||||    
T  20588676 cccacccttacctta 20588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 20593114 - 20593228
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactaca-aggttaaaccctttttc--aaaattatacaacccattattagagaaagctagt 266  Q
    |||| ||||| |||| ||||||||| ||||||||||||||   | | | ||||||||||||||   | ||| |||||||||||||||||||||||||| |    
T  20593114 caatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaat 20593213  T
Q  267 cccacccttacctta 281  Q
    |||||||||||||||    
T  20593214 cccacccttacctta 20593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 21243933 - 21243863
Alignment:
Q  86 aactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| | |||||||| |||||| |||||||||    
T  21243933 aactctgcctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactcttt 21243863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 21995682 - 21995636
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  21995682 tagtcccacccttatcttagtattgatgatcggcggtctctctccct 21995636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 35895088 - 35895152
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||| ||||||||| ||| |||||||||||||||||| ||||||||||| |||| ||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttag 35895152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 39061278 - 39061373
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||||||| ||| ||||||||||||||||| ||||||| |||||||  || ||| |||| |||| | ||||||||| ||||||||||    
T  39061278 tctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata-tactcatgattacagaaggttagtcccactcttaccttag 39061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 45499531 - 45499595
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||  | ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  45499531 gttaaacccctttatagaatcatacaacccattattagagaaagctagtctcacccttaccttag 45499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 7703121 - 7703175
Alignment:
Q  227 tttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  7703121 tttttccaaattata-aactcattattagagaaagctagtcccacccttaccttag 7703175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 16401902 - 16401963
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||||||||| ||||| ||||||| ||||||||||||||||| | |||||||||||||||||||    
T  16401902 gttaaaccctatttcagaattata-aacccattattagagaa-gttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 46197966 - 46197871
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  46197966 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 46197871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 44822312 - 44822249
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 44822249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 38056893 - 38056800
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 155  Q
    |||| |||||||||||| |||| |||||   ||||| |||| ||| |||  || ||||||||||||||| ||||||||  ||||| ||||||||    
T  38056893 acccaaaccccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 38056800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 19676711 - 19676763
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 25601545 - 25601371
Alignment:
Q  63 ccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 162  Q
    |||||| |||||||||||||||||| ||||||||| |||||| |||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25601545 ccctaagcccaaattttatagaaaattcttcctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaa 25601446  T
Q  163 ttgaactcaatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccctttttcaaaatta 239  Q
    || || ||||||||||| |||| |||||||||  |||||||||   |||||| ||||||||||||||||||| |||||    
T  25601445 ttaaattcaatctaaccctaatttctataacatgaaaactaac---aactacaaaggttaaaccctttttcagaatta 25601371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 21683169 - 21683074
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21683169 tctataacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 19825576 - 19825472
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatg 290  Q
    |||| |||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  291 atcgg 295  Q
    |||||    
T  19825476 atcgg 19825472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 15998831 - 15998942
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||  |  ||||||||||| ||||| ||    
T  15998831 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctca 15998930  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  15998931 cccttaccttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 20410619 - 20410512
Alignment:
Q  172 atctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccac 271  Q
    |||||||| |||| |||||  || ||||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||    
T  20410619 atctaaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccac 20410522  T
Q  272 ccttacctta 281  Q
    ||||||||||    
T  20410521 ccttacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 29045260 - 29045334
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgat 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 23658069 - 23658142
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  23658069 aactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 29045104 - 29045197
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||| ||||||    
T  29045104 cccaaatttgatagaaaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaat 29045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 34140548 - 34140455
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||||||||||| ||||||||| |||||||   ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34140548 ctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattagag-aagctagtcccacccttaccttag 34140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 18982539 - 18982625
Alignment:
Q  196 caaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| || ||||||| |||||||||    
T  18982539 caaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 27330033 - 27329953
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| |||||||||||| |  ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27330033 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccct 27329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 27390773 - 27390693
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| |||||||||||| |  ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27390773 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccct 27390693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 25921833 - 25921927
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||  |||||  ||||||||    
T  25921833 aaccctaacccaaaattt-atagaaaacttttcctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactcttt 25921927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 34153164 - 34153071
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||||||||||| ||||||||| ||||| |   ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34153164 ctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattagag-aagctagtcccacccttaccttag 34153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 10446162 - 10446270
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| | |||||||||||| | ||||   ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||    
T  10446162 taaccctaatttctataacatcgaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 10446260  T
Q  273 cttaccttag 282  Q
    ||||||||||    
T  10446261 cttaccttag 10446270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 15173483 - 15173425
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  15173483 attagagaaagttagtcccaccattaccttagtattgatgatcggcggtctctctccct 15173425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 28103466 - 28103420
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28103466 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 28103420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 1818822 - 1819005
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacacca 197  Q
    ||||||||||||||||||  || |  |||| |||||||| || |||||||||||||| ||||||  |  |  |||| ||||| |||| ||||||||| ||    
T  1818822 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 1818921  T
Q  198 aaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||  || ||||||||| ||||||||||||||| || ||||  || ||| |||| |||| | ||||| ||||||||||||||    
T  1818922 aaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 15900684 - 15900626
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||    
T  15900684 attagagaaagttggtctcacccttaccttagtattgaagatcggcggtctctctccct 15900626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 24506265 - 24506155
Alignment:
Q  132 taattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttt 230  Q
    |||||||||||||||||||| |||| ||||||| || | |||| ||| | |||  ||||||||| |||||||| ||| ||||||||  ||||||||||||    
T  24506265 taattcattggattacctacactttcaacaattaaattacaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttt 24506166  T
Q  231 tcaaaattata 241  Q
    ||| |||||||    
T  24506165 tcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 27852240 - 27852286
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27852240 tagtcccacccttaccttagtattgatgatcagcggtctctctccct 27852286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 20733262 - 20733216
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  20733262 tagtctcacccttaccttagtattgatgatcagcggtctctctccct 20733216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 30673454 - 30673401
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||||||| |  ||||||||||| || |||||||||||||||||    
T  30673454 tttcaaaattatacaacctaaaattagagaaagttaatcccacccttaccttag 30673401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 12942963 - 12943019
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||| |||||||||||||||||||    
T  12942963 acccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaaca 12943019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 15890764 - 15890711
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  15890764 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 35057384 - 35057477
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| ||||||||||   | ||  |||||||||||| ||||| | ||||| | ||| | |||||||||||||||||| |||| ||||||    
T  35057384 cccaaatttgatagaaaacttaacttaagattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 35057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 28288725 - 28288669
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  28288725 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 28288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 74 - 282
Target Start/End: Original strand, 28396 - 28604
Alignment:
Q  74 aattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaat 173  Q
    ||||||||||||||||||||||||  ||||||||||| |||| || |||||  |||  ||||| ||||||||||||||||||||||||||| || |||||    
T  28396 aattttatagaaaactcttcctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactcttttaacaattaaattcaat 28495  T
Q  174 ctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    |||||| ||||||||||||||  ||||||||||| |||||| ||||||||||||||||||| |||||||  || ||| ||||  ||| | |||||||||     
T  28496 ctaaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata-tactcatgattaaggaaggttagtcccact 28594  T
Q  273 cttaccttag 282  Q
    ||||||||||    
T  28595 cttaccttag 28604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 70 - 295
Target Start/End: Complemental strand, 50351029 - 50350802
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||||||||||||||||||||||  ||||| ||||| ||||||| ||||   |||  ||  |||||||||||||||| |||||||||||| || |    
T  50351029 cccaaattttatagaaaactcttcctatgtttattatacaacctgaacatcaatctgtacactatgtcattggattacctacgcttttaacaattaaatt 50350930  T
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccc--tttttcaaaattatacaacccattattagagaaagctagt 266  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||| |||||||  || ||| |||| |||| | ||||    
T  50350929 caatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagt 50350831  T
Q  267 cccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||||||||  | |||||||||    
T  50350830 cccacccttaccttagattagatgatcgg 50350802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 17208466 - 17208577
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17208466 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtccca 17208565  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  17208566 cccttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 14520392 - 14520499
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| | ||||||| |||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||    
T  14520392 taaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccaccct 14520491  T
Q  275 taccttag 282  Q
    ||||||||    
T  14520492 taccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 282
Target Start/End: Original strand, 29907477 - 29907692
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactc 170  Q
    |||||||| |||| ||| ||| |||||  ||||||| |||   |||||||||| | |||| ||||||||   ||||||||| |||| ||||||| || |     
T  29907477 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29907576  T
Q  171 aa---tctaaccataatctctataa-caccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagt 266  Q
     |   ||||||| |||| ||| ||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  29907577 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagt 29907676  T
Q  267 cccacccttaccttag 282  Q
    ||||||||||||||||    
T  29907677 cccacccttaccttag 29907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 282
Target Start/End: Original strand, 29948643 - 29948858
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactc 170  Q
    |||||||| |||| ||| ||| |||||  ||||||| |||   |||||||||| | |||| ||||||||   ||||||||| |||| ||||||| || |     
T  29948643 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29948742  T
Q  171 aa---tctaaccataatctctataa-caccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagt 266  Q
     |   ||||||| |||| ||| ||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  29948743 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagt 29948842  T
Q  267 cccacccttaccttag 282  Q
    ||||||||||||||||    
T  29948843 cccacccttaccttag 29948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 282
Target Start/End: Original strand, 29997797 - 29998012
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactc 170  Q
    |||||||| |||| ||| ||| |||||  ||||||| |||   |||||||||| | |||| ||||||||   ||||||||| |||| ||||||| || |     
T  29997797 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29997896  T
Q  171 aa---tctaaccataatctctataa-caccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagt 266  Q
     |   ||||||| |||| ||| ||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  29997897 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagt 29997996  T
Q  267 cccacccttaccttag 282  Q
    ||||||||||||||||    
T  29997997 cccacccttaccttag 29998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 14641638 - 14641534
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatg 290  Q
    |||| ||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||  | ||||    
T  14641638 aacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttagattagatg 14641539  T
Q  291 atcgg 295  Q
    |||||    
T  14641538 atcgg 14641534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 70 - 282
Target Start/End: Complemental strand, 3527368 - 3527156
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaat-ctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaac 168  Q
    ||||||||  |||| ||||||  |||||  |||||||||||| ||||||  || |  |||| |||||||| ||| ||||||||||||| ||||||  | |    
T  3527368 cccaaattcaataggaaactcaacctatgtttattctacaattctgaacctcattccttacgttaattcaatggcttacctactctttcaacaatcaatc 3527269  T
Q  169 t-caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    | |||  ||||| |||| ||||||||| |||||||||||||| | ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  3527268 tacaaattaaccctaatttctataacatcaaaactaacaaaa-caacatg-ttaaacccctttttaaaatcatacaacccattattagagaaagctagtc 3527171  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  3527170 ccacccttaccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 14152471 - 14152398
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14152471 aactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 5215627 - 5215699
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  5215627 aactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 22841342 - 22841278
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22841342 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 54875586 - 54875474
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  54875586 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 54875488  T
Q  268 ccacccttacctta 281  Q
    ||||||||||||||    
T  54875487 ccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 6805139 - 6805046
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| ||||||||||   | ||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 24177788 - 24177708
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| |||||||||||  || ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttagtattgataatcggcggtctctctccct 24177708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 45803394 - 45803338
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45803394 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 6156651 - 6156763
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  6156651 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttt-agaatcatacaacccattattagagaaagctagtc 6156748  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  6156749 ccacccttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 17684947 - 17684835
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | |||||  ||||||||| |||| | ||| |||||||||||||||| ||||| ||||||    
T  17684947 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtc 17684849  T
Q  268 ccacccttacctta 281  Q
    ||||||||||||||    
T  17684848 ccacccttacctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 36528889 - 36528947
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  36528889 attagagaaagttaatcccacccttaccttagtattgatgatcggcggtctctctccct 36528947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 6159345 - 6159471
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||| ||||    
T  6159345 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcgagtc 6159443  T
Q  268 ccacccttaccttagtattgatgatcgg 295  Q
     ||||||||||||||  | |||||||||    
T  6159444 tcacccttaccttagattagatgatcgg 6159471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 3160808 - 3160626
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| || |||| ||||| |||  ||||||||||| |||||||||||||| ||||||  || | |||| ||| | |||| ||||||| | |||    
T  3160808 ttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaatcaaattgcaatttaaacctaatttctataatatcaa 3160709  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| |||||||| ||||||||| |||| | |||||||  || ||| |||| |||| | ||||| ||||||||||||||    
T  3160708 aactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcacccttaccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 14442115 - 14442228
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||  |||| | ||| |||||||||||||||| ||||||||||||    
T  14442115 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagtc 14442213  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  14442214 ccacccttaccttag 14442228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 15446898 - 15446840
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||    
T  15446898 attagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccct 15446840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 17669810 - 17669698
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  17669810 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 17669712  T
Q  268 ccacccttacctta 281  Q
    ||| | ||||||||    
T  17669711 ccatcattacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 37641522 - 37641476
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37641522 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 37641476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 2247938 - 2247877
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  2247938 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 2247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 15566724 - 15566797
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||||||||||||| |||||||||||  |  ||||||||||| ||||||||||||||| ||||    
T  15566724 aactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 2841607 - 2841505
Alignment:
Q  181 taatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacc 278  Q
    |||| ||||||||| |||||||||||||| | ||||   ||||||||  |||| | ||| ||||||||||||||||||||||||||||| ||||||||||    
T  2841607 taatttctataacatcaaaactaacaaaa-caacaacatgttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacccttacc 2841509  T
Q  279 ttag 282  Q
    ||||    
T  2841508 ttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 12917369 - 12917305
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  12917369 gttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 12917515 - 12917443
Alignment:
Q  80 atagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctact 152  Q
    |||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctact 12917443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 16979934 - 16979989
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctc 306  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  16979934 attaaagaaagttagtcccacccttaccttagtattgatgatcgacggtctctctc 16979989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 3263993 - 3263935
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3263993 attagagaaggttaatccgacccttaccttagtattgatgatcggcggtctctctccct 3263935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 14967218 - 14967264
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  14967218 tagtcccccccttaccttagtattgatgatcggcggtctctctccct 14967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 52465389 - 52465345
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctcc 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  52465389 tagtcacacccttaccttagtattgatgatcggcggtctctctcc 52465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 48631172 - 48631384
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||| ||||  | |||||  ||||||||||| ||||||| ||||| |||  ||||||||||| ||||||||| |||| ||||| | || |    
T  48631172 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaa-tcaatt 48631270  T
Q  170 --caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
      |||| ||||| | |  ||||||||| ||||||||  || ||||||||| ||||||||||||||| || ||||  |   || |||| |||| | |||||    
T  48631271 agcaatttaaccctgacttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tatttatgattaaagaaggttagtc 48631369  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  48631370 ccacccttaccttag 48631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 52988876 - 52988830
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  52988876 tagtctcacccttaccttagtattgatgatctgcggtctctctccct 52988830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 45803557 - 45803456
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaaca 161  Q
    ||||||| ||||||||  |||| ||||||  |||||  ||||||||||| ||| ||| ||||| |||  ||||||||| |||||||||||||||| ||||    
T  45803557 accctaatcccaaattcaataggaaactcaacctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaaca 45803458  T
Q  162 at 163  Q
    ||    
T  45803457 at 45803456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 13522530 - 13522474
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||||||||    
T  13522530 ttattctacaacctgaacatcaattcttatgttaattcattggattacctactcttt 13522474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 31223864 - 31223824
Alignment:
Q  269 cacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  31223864 cacccttaccttagtattgatgatcggtggtctctctccct 31223824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 24547142 - 24547253
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcc 268  Q
    ||||||||| |||| ||||||||| |||| ||||||||| | ||||   ||||||| | |||| | ||| ||||||||||||||||||||||| |||||     
T  24547142 aatctaaccctaatttctataacatcaaa-ctaacaaaa-caacaacatgttaaactcctttttagaatcatacaacccattattagagaaagatagtct 24547239  T
Q  269 cacccttaccttag 282  Q
    || |||||||||||    
T  24547240 catccttaccttag 24547253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 21845751 - 21845651
Alignment:
Q  181 taatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctt 280  Q
    |||| ||||||||| ||||||||  || ||||||||| ||||||||||||||| || ||||  ||  || |||| |||| | ||||||||||||||||||    
T  21845751 taatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tacttatgattaaagaaggttagtcccacccttacctt 21845653  T
Q  281 ag 282  Q
    ||    
T  21845652 ag 21845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 25202125 - 25202187
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  25202125 gttaaaccctatttcagatttata-aacccattattagcgaa-gctagtcccacccttaccttag 25202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 48043539 - 48043477
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||||||||||||| || |||||||||||| ||||||||  ||||||||||||||    
T  48043539 gttaaaccctatttcaaaattata-aatccattattagag-aagctagttacacccttaccttag 48043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 50755360 - 50755266
Alignment:
Q  176 aaccataatctctataacaccaaaactaacaaa--aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccc 269  Q
    |||| |||| ||||||||| |||||||||||||  ||| || | ||||||||| |||| | ||| |||||| |||||||||||||||| |||||||    
T  50755360 aaccctaatttctataacatcaaaactaacaaagcaacaac-atgttaaacccctttttagaatcatacaatccattattagagaaagttagtccc 50755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 54521596 - 54521652
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||| |||||||||||||||||||    
T  54521596 acccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaaca 54521652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 24549016 - 24548953
Alignment:
Q  219 ttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||| | ||| |||||||||||||||||| |||| ||||| ||||||||| ||||    
T  24549016 ttaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttag 24548953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 16979753 - 16979838
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    |||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16979753 ccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16979838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 3803647 - 3803703
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  3803647 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 3803703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 12305896 - 12305952
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  12305896 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 12305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 16050916 - 16050980
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||  ||||| ||| |||||||  |  ||||||||||| ||||||||||||||||||||    
T  16050916 gttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 24178005 - 24177969
Alignment:
Q  9 atcatcaaaaacaatggaaaacaaaaacccttcacta 45  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  24178005 atcatgaaaaacaatggaaaataaaaacccttcacta 24177969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 1962 - 2073
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  1962 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 2061  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  2062 cccttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 186306 - 186195
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  186306 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 186207  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  186206 cccttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 14631077 - 14631188
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  14631077 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 14631176  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  14631177 cccttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 25513793 - 25513904
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25513793 aatctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtccca 25513892  T
Q  271 cccttaccttag 282  Q
    || |||||||||    
T  25513893 ccattaccttag 25513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 26446149 - 26446260
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| |    
T  26446149 aatctaaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtccta 26446248  T
Q  271 cccttaccttag 282  Q
    ||||||| ||||    
T  26446249 cccttactttag 26446260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 16296897 - 16296991
Alignment:
Q  188 tataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 15239972 - 15239815
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaactaacaaaaactacaa-ggttaaac 224  Q
    |||| |||||||| ||| ||||||||| ||| ||||||| || ||||||||||| |||||||||||||  |||||| ||| | ||||| || ||||||||    
T  15239972 ttacgttaattcaatggtttacctactttttcaacaattaaattcaatctaaccctaatctctataacctcaaaaccaacgacaactataaaggttaaac 15239873  T
Q  225 cctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||||    
T  15239872 cctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 35660915 - 35661002
Alignment:
Q  188 tataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccctt 275  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35660915 tataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 26921715 - 26921550
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    |||||||||||||||||| |||||||||  |||||||||||  |||||| |||||  |||   ||||||||||||||||||||    |||||||| || |    
T  26921715 cccaaattttatagaaaa-tcttcctatgtttattctacaacatgaacatcaatttgtacacaaattcattggattacctact----taacaattaaatt 26921621  T
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccctttttcaaaatta 239  Q
    |||||||||| |||||||||| ||| |||||||||||| |||||| || |||||||||||||||| |||||    
T  26921620 caatctaaccctaatctctatgacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 26921550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 9622357 - 9622542
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacacca 197  Q
    ||||||||||||||||||  || |  |||| |||||||| ||||||||||||||||| ||||||  |  |  |||| ||||| |||| ||||||||| ||    
T  9622357 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 9622456  T
Q  198 aaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||| | ||||   ||||||||| |||| | ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  9622457 aaactaacaaaa-caacaacatgttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacccttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 9638972 - 9639063
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||||| || ||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  9638972 aacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttag 9639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 2424497 - 2424386
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||| |||| |||| ||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||||  |  ||||||||||| ||||| ||    
T  2424497 aatcgaaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctca 2424398  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  2424397 cccttaccttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 33186887 - 33186955
Alignment:
Q  213 acaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  33186887 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 12424364 - 12424290
Alignment:
Q  209 aactacaaggttaaacccttttt--caaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  12424364 aactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 14477502 - 14477684
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaa-ctcaatctaaccataatctctataacaccaa 198  Q
    ||||||||||||||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||  ||  ||||| ||||| |||  ||||||||| |||    
T  14477502 ttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaacaatcaaatttcaatttaaccctaacttctataacatcaa 14477601  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||  |||||||| | ||||||||||||| |||||||  || ||| |||| |||| | |||| |||||||||||||||    
T  14477602 aactatcaacgactacaagatcaaaccctttttcagaattata-tactcatgattaaagaaggttagtgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 55583136 - 55583249
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  55583136 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttataatcatacaacccattattagagaaagctagtc 55583234  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  55583235 ccacccttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 15008985 - 15009043
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15008985 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 15009043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 16296711 - 16296852
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||| |||||   ||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||  |  |    
T  16296711 cccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattt 16296810  T
Q  170 caa--tctaaccataatctctataacaccaaaactaacaaaa 209  Q
     ||  || |||| |||| ||||||||| ||||||||||||||    
T  16296811 taatttcaaaccctaatttctataacatcaaaactaacaaaa 16296852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 14186980 - 14187038
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  14186980 attagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctccct 14187038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 40620554 - 40620612
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  40620554 attagagaaagttattcccacccttaccttagtattgatgatcggcggtctctctccct 40620612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 45314212 - 45314124
Alignment:
Q  152 tcttttaacaattgaactcaatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaaccctttttcaaaatta 239  Q
    |||||| |||||| || ||||||||||| |||||||||||||| |||||||||||| |||||| || |||||||||||||||| |||||    
T  45314212 tcttttcacaattaaattcaatctaaccctaatctctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 10057695 - 10057741
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10057695 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 10057741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 20150722 - 20150832
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaa-ctaacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| |||  || |||||||||||||||     
T  20150722 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaaggttaaat 20150821  T
Q  225 cctttttcaaa 235  Q
    |||||||||||    
T  20150822 cctttttcaaa 20150832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 13847193 - 13847254
Alignment:
Q  221 aaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttag 13847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 14549490 - 14549583
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   | ||| |||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||| ||||||    
T  14549490 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 19434871 - 19434778
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| |||||||||||||||| | |||||||||  ||||||||||||||| ||||||    
T  19434871 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 35660728 - 35660821
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   | ||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| | ||||||    
T  35660728 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaat 35660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 10273372 - 10273436
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| |||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 10694466 - 10694371
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  10694466 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 10694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 15747845 - 15747787
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||||||| |||||||||||||||| ||||||||||| |||  |||||||||| |||||    
T  15747845 aactacaatgttaaaccctttttcagaattatacaactcatctttagagaaagttagtc 15747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 17143002 - 17143063
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| ||||||||| |||||| ||||||||||| |||  ||||||||||||| |||||    
T  17143002 aactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagctattccca 17143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 282
Target Start/End: Original strand, 18462896 - 18463076
Alignment:
Q  103 ttctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatct-aaccataatctctataacaccaaaa 200  Q
    |||||||||||||||| ||||| | |  ||||||||||||||||||||| |||| ||||||  || |  ||| | || | |||  | ||||||| |||||    
T  18462896 ttctacaatctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttttataacatcaaaa 18462995  T
Q  201 ctaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||  || ||||||||  ||||||||||||||| |||||||  || ||| |||| |||| | |||||||||| |||||||||    
T  18462996 ctattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcccacctttaccttag 18463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 54798092 - 54798029
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| ||||||||||||| |||||||||  |||||| |||||||||  ||||| |||||||||    
T  54798092 cctatgattattctacaatatgaacaccacctattactttaattcatcagattatctactcttt 54798029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 9638841 - 9638934
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 155  Q
    |||| |||||||||||| |||| |||||   ||||| |||| ||| |||  || ||||||||||||||| ||||||||  ||||| ||||||||    
T  9638841 acccaaaccccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 9638934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 12623297 - 12623369
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||||||||||||||  |||| |  ||| || |||| |||| | ||||||||||||||||||||    
T  12623297 aactacaaggttaaaccctttttcaggattaca-tacctatgattaaagaaggttagtcccacccttaccttag 12623369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 35811429 - 35811376
Alignment:
Q  228 ttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||||||||| ||  |  ||||||||||| |||||||||||||||||||    
T  35811429 ttttcaaaattataccacttagaattagagaaagttagtcccacccttacctta 35811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 3838027 - 3838099
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaa 198  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| ||| |||| ||| |||||    
T  3838027 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaaactctttaaaaccaa 3838099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 36038644 - 36038700
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  36038644 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 36038700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 49547162 - 49547106
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  49547162 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 49547106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 18816405 - 18816295
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  18816405 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtccca 18816306  T
Q  271 cccttacctta 281  Q
    |||||||||||    
T  18816305 cccttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 12577826 - 12577959
Alignment:
Q  176 aaccataatctctataacaccaaaactaacaaaaactacaa-ggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    |||| |||||||||||||| |||||||||||| ||||| || ||||||||||||||||  |||||||||||  |||||||||||||| ||||||||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccaccct 12577924  T
Q  275 taccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| || ||||||||||||    
T  12577925 taccttagtattgatgatcagcagtctctctccct 12577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 21514633 - 21514743
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||    
T  21514633 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtccca 21514732  T
Q  271 cccttacctta 281  Q
    |||||||||||    
T  21514733 cccttacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 36732506 - 36732411
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36732506 ctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 4380727 - 4380616
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||  |  ||||||||||| ||||||||    
T  4380727 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtccca 4380628  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  4380627 cccttaccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 22208249 - 22208335
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  22208249 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcgg 22208335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 21676773 - 21676592
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaa-tctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| |||  |  || | || | ||| | |||| ||||||| | |||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaaccttccaattgaaatttaaacctaatttctataatatcaa 21676674  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| |||||||| |||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21676673 aactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagtcccacccttaccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 22610448 - 22610266
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacacca 197  Q
    ||||||||||||||||||  || |  |||| |||||||| ||||||||||||||||| ||||||  |  |  |||  |||||||||| ||||||||| ||    
T  22610448 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaattttacaaattaaccataatttctataacatca 22610349  T
Q  198 aaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||  ||  | ||||||||| |||| | ||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  22610348 aaactaacaaaa--taacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 21399657 - 21399770
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  21399657 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 21399755  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  21399756 ccacccttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 21794150 - 21794263
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  21794150 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 21794248  T
Q  268 ccacccttaccttag 282  Q
    |||||||||||||||    
T  21794249 ccacccttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttac 277  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 19880844 - 19880902
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19880844 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 19880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 23479104 - 23479162
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23479104 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 23479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 282
Target Start/End: Complemental strand, 21678995 - 21678845
Alignment:
Q  131 ttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaacccttt 229  Q
    ||||||||||| |||||||||||||| ||| ||  || | ||||  || | ||||  |||||| | |||||||| ||| |||||||| |||||||||| |    
T  21678995 ttaattcattgaattacctactctttcaaccatccaattgcaattcaaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctat 21678896  T
Q  230 ttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21678895 ttcataattata-aacccattattagagaa-gctagtcccacccttaccttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 21676583 - 21676499
Alignment:
Q  196 caaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| ||| |||||||| |||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21676583 caaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 17158993 - 17158936
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccc 308  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17158993 attagagaaagttagtcccacccttaccttagtattgatgatcggtggtctctctccc 17158936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 22258378 - 22258306
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||| ||||||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  22258378 aactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 22345153 - 22345217
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 22356813 - 22356877
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22356877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 18834366 - 18834474
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccc 269  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||| | |||||||| |||| | ||| |||||| ||||||||||||||||||||||||    
T  18834366 caatttaaccctaatttctataacatcaaaactaacaaaa-caacatg-ttaaacccctttt-agaatcatacaatccattattagagaaagctagtccc 18834462  T
Q  270 acccttacctta 281  Q
    ||||||||||||    
T  18834463 acccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 26454730 - 26454788
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  26454730 attagagaaagttagtcccacccttaccttagtattgatgatcggcgatctttctccct 26454788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 18023628 - 18023567
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  18023628 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 18023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 38184984 - 38184923
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  38184984 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 38184923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 41680204 - 41680105
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccc 308  Q
    ||||||||||||||||||||| |||  |||| | | |  || |||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  41680204 aactacaaggttaaaccctttatcaggattacata-cttatgattaaagaaggttagtcccacctttaccttagtattgatgatcggcggtctctctccc 41680106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 16198858 - 16198916
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||    
T  16198858 attagagaaagttagtcccacttttaccttagtattgatgatcggtggtctctctccct 16198916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 21697615 - 21697509
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaa-ctaacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| |||  || |||||||| |||||||    
T  21697615 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaatgttaaac 21697516  T
Q  225 ccttttt 231  Q
    |||||||    
T  21697515 ccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 22966707 - 22966817
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaa-ctaacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||  ||||||||||||| ||||||| || ||||| ||||| ||||| || ||||| ||||| |||  || ||||||||||||||||    
T  22966707 ttacgttaattcaatgatttacctactctttcaacaattaaattcaatataaccctaatcgctttaacatcaaaacctattaacaactacaaggttaaac 22966806  T
Q  225 cctttttcaaa 235  Q
    |||||||||||    
T  22966807 cctttttcaaa 22966817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 22237065 - 22237024
Alignment:
Q  266 tcccacccttaccttagtattgatgatcggcggtctctctcc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22237065 tcccacccttaccttagtattgatgatcggcggtctctctcc 22237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 12037385 - 12037290
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| |  |||| ||||| |||||||||||| || |||||||||||||| | |||||||| |||||| |||||||||    
T  12037385 aacccaaatcccaaatttgataggagtctctacctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactcttt 12037290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 20879343 - 20879406
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||||||||||    
T  20879343 ttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaat 20879406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 23884116 - 23884222
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaa--actacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| ||||||||||||||  || ||| | |||||||| |||| | ||| ||||||||||||  ||||||||||||||||| ||    
T  23884116 taaccctaatttctataacatcaaaactaacaaaagaacaacatg-ttaaacccctttttagaatcatacaacccatt--tagagaaagctagtcccgcc 23884212  T
Q  273 cttaccttag 282  Q
    ||||||||||    
T  23884213 cttaccttag 23884222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 22483927 - 22483990
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||| | ||||||||||| ||||||||||||||| ||||||| | ||||||||||    
T  22483927 gttaaaccctttttaagaattatacaactcattattagagaaagttagtccc-cgcttaccttag 22483990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 36305988 - 36306063
Alignment:
Q  219 ttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||| ||||||||| ||| ||||||||  ||||||||||||||||||| ||||||||||||||  | |||||||||    
T  36305988 ttaaaacctttttcagaatcatacaaccg-ttattagagaaagctagtctcacccttaccttagattagatgatcgg 36306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 25657735 - 25657640
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||| ||||| |||  ||||||||||| ||||||||||||||    
T  25657735 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt 25657640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 22483620 - 22483713
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||  |||| ||||||  |||||  ||||||||||| ||||||| ||||| |||  |||||||||  ||||||||||||||| ||||||    
T  22483620 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 16198667 - 16198762
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16198667 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16198762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 20517238 - 20517175
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  20517238 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 20517175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 22344993 - 22345056
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  22344993 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 22356653 - 22356716
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  22356653 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22356716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 20022070 - 20022026
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  20022070 attagagaaagttagtcccacccttaccttagattagatgatcgg 20022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 15575759 - 15575648
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15575759 aatctaaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 15575660  T
Q  271 cccttaccttag 282  Q
    ||| ||||||||    
T  15575659 cccctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 43745598 - 43745709
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||  |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  43745598 aatctaactctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtccca 43745697  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  43745698 cccttaccttag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 708523 - 708428
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  708523 ctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 47095398 - 47095505
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| ||||||||| |||| ||||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  47095398 taaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccaccct 47095497  T
Q  275 taccttag 282  Q
    ||||||||    
T  47095498 taccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 282
Target Start/End: Complemental strand, 13315302 - 13315081
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaac 160  Q
    ||||| || ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||    
T  13315302 aacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaac 13315203  T
Q  161 aattgaactcaa--tctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagaga 258  Q
    |||  |  | ||  || || | |||| |||  |  | ||||| |||| ||||| || | ||||||||| |||||| ||| ||||||||||||||||||||    
T  13315202 aatcaattttaatttcaaaacctaatttctcaacaatcaaaattaac-aaaacaac-atgttaaaccccttttcagaatcatacaacccattattagaga 13315105  T
Q  259 aagctagtcccacccttaccttag 282  Q
    ||| ||||| ||||||||||||||    
T  13315104 aagatagtctcacccttaccttag 13315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 19195570 - 19195677
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtatt 286  Q
    |||||||| |||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||  |     
T  19195570 ctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccacccttaccttagatta 19195668  T
Q  287 gatgatcgg 295  Q
    |||||||||    
T  19195669 gatgatcgg 19195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 20252292 - 20252181
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||| | |||| |||||||||  |||||||| || |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| |    
T  20252292 aatctaatcctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtccta 20252193  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  20252192 cccttaccttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 18874774 - 18874664
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccc--tttttcaaaattatacaacccattattagagaaagctagtcc 268  Q
    ||||||||| |||| ||||||||| |||||||| |||   ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||     
T  18874774 aatctaaccctaatttctataacatcaaaactaccaa---ctacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtct 18874678  T
Q  269 cacccttaccttag 282  Q
    ||||||||||||||    
T  18874677 cacccttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 8513825 - 8513752
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8513825 aactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 19282887 - 19282979
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||||| |||||||||||| ||||| |||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||| ||||||    
T  19282887 ccaaatttgatagaaaactctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaat 19282979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 4690773 - 4690662
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| ||||| ||| || ||||||||||||||||||||||||| |||||||||||  |  ||||||||||| ||||||||    
T  4690773 aatctaaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtccca 4690674  T
Q  271 cccttaccttag 282  Q
    || |||||||||    
T  4690673 cctttaccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 38299738 - 38299801
Alignment:
Q  219 ttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 38299801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 8488166 - 8488093
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8488166 aactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 48212839 - 48212726
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccc--tttttcaaaattatacaacccattattagagaaagctagtcc 268  Q
    ||||||||| |||| ||||||||| |||||||||||| || ||||| |||||||||  ||||| | ||| |||||||| |||||| |||||||||||||     
T  48212839 aatctaaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtca 48212740  T
Q  269 cacccttaccttag 282  Q
    ||||||||||||||    
T  48212739 cacccttaccttag 48212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 58522 - 58399
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccc 269  Q
    |||| ||||| |||| ||| ||||| |||||||||||||| | ||| | |||||||| |||| | ||| |||||||||||||||||||||||||||||||    
T  58522 caatttaaccctaatttctttaacatcaaaactaacaaaa-caacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 58425  T
Q  270 acccttaccttagtattgatgatcgg 295  Q
    |||||||||||||  | |||||||||    
T  58424 acccttaccttagattagatgatcgg 58399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 43276815 - 43276744
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43276815 aactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 47975102 - 47975010
Alignment:
Q  71 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||||| ||||||||||    |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  47975102 ccaaatttgatagaaaacttaatctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 25943256 - 25943319
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  25943256 gttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 15720719 - 15720831
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| |||||||||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||| ||||||||||||||    
T  15720719 caatttaaccataatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtc 15720817  T
Q  268 ccacccttacctta 281  Q
    ||||| ||||||||    
T  15720818 ccacctttacctta 15720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 12754877 - 12754784
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  12754877 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 38295442 - 38295527
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 155  Q
    ||||||||  |||| ||||||| ||||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||    
T  38295442 cccaaattcaataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactctt 38295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 36300796 - 36300640
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaa 223  Q
    |||| |||||||| ||||||||||||||||| |||| || |  |  |||| ||||| ||||  ||||| || ||||||||||||||  ||  | ||||||    
T  36300796 ttacgttaattcaatggattacctactctttcaacagttaattttgcaatttaaccctaattcctatatcatcaaaactaacaaaa--taacatgttaaa 36300699  T
Q  224 ccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||| |||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  36300698 cccctttttagaatcatacaacccattattagagaaagctagtctcacctttaccttag 36300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 8930872 - 8930764
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| ||||||||||||||||||||||  ||||||||||    
T  8930872 taaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccacc 8930774  T
Q  273 cttaccttag 282  Q
    ||||||||||    
T  8930773 cttaccttag 8930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 16550035 - 16549977
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  16550035 attagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccct 16549977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 16615627 - 16615685
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  16615627 attagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccct 16615685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 19485991 - 19485945
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19485991 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 19485945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29052212 - 29052154
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  29052212 attagagaaagttagtcccacccttaccttagtattgatgatcgacggtttctctccct 29052154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 46579774 - 46579729
Alignment:
Q  266 tcccacccttaccttagtattgatgatcggcggtctctctccctat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46579774 tcccacccttaccttagtattgatgatcggcggtctctctccctat 46579729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 13744573 - 13744509
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  13744573 gttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttaccttag 13744509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 33556168 - 33556104
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  33556168 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttatcttag 33556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 15700840 - 15700734
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| |||||||||  ||||||||||| ||||||| | |||||||| |||| | ||  ||||||||||||||||||||||||||||  || |||    
T  15700840 taaccctaatttctataacattaaaactaacaacaactacatg-ttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatcct 15700742  T
Q  275 taccttag 282  Q
    ||||||||    
T  15700741 taccttag 15700734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  228 ttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 18570592 - 18570700
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    |||||||||  ||||||||| |||||||||||||| | ||||   ||||||||| |||  | |||  |||||||||||||||||||||||||||| ||||    
T  18570592 taaccataacttctataacatcaaaactaacaaaa-caacaatatgttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacc 18570690  T
Q  273 cttaccttag 282  Q
    ||||||||||    
T  18570691 cttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 30820169 - 30820123
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  30820169 tagtcccaccctcaccttagtattgatgatcggcggtctctctccct 30820123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 42566014 - 42565872
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| |||||  ||  ||||||||||||||||| ||| |||| ||||||  || | |||| ||| | |||  ||||||||| |||    
T  42566014 ttattctacaacctgaacatcaatttctatgttaattcattggattacgtacactttcaacaatcaaatttcaatttaaacctaacttctataacaacaa 42565915  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattata 241  Q
    || || ||| ||||||||| ||||||||||||||| |||||||    
T  42565914 aattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 19283051 - 19283108
Alignment:
Q  224 ccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 708733 - 708640
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || ||||||||||||||||||||| |||   ||| |||||||||| ||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaat 708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 16186855 - 16186928
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaa 244  Q
    ||||||||| |||| ||||||||| ||||||||  || ||| | ||||||||||||||||||| ||||||||||    
T  16186855 aatctaaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 34958325 - 34958386
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||| ||||||||| ||||||||||| |||  |||||||||||||||||||    
T  34958325 aactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagctagtccca 34958386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 16550223 - 16550128
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||||||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16550223 aacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16550128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 16615439 - 16615534
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||||||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16615439 aacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16615534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 14274086 - 14274156
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||| |||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  14274086 cctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 14274156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 831922 - 831861
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||| | |||| ||||||||||  ||||||||| |||||||||    
T  831922 aactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 1197102 - 1197041
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||| | |||| ||||||||||  ||||||||| |||||||||    
T  1197102 aactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 1197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 36685159 - 36685118
Alignment:
Q  268 ccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  36685159 ccacccttaccttagtattgatgatcaacggtctctctccct 36685118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  213 acaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttac 277  Q
    |||| ||||||||| |||| | ||| ||||||| ||||||||||||||||||||| | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 32160410 - 32160326
Alignment:
Q  72 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  32160410 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 32160326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 12127215 - 12127149
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||  | |||||||||    
T  12127215 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 12127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 19195032 - 19195118
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||| |||| |||||   ||||| |||||||||||||||||| | ||||| | ||| | |||||||||||||| ||| ||||    
T  19195032 cccaaatttgataggaaacttaacctatgattattctacaatctgaataacaattctcaccatgattcattggattacatacacttt 19195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 20214147 - 20214200
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||||||||||| ||  ||| ||||||| ||||||||||||||||||||    
T  20214147 tttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttag 20214200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 48274353 - 48274410
Alignment:
Q  99 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||||||  ||||||||| ||||||| |||||||||  ||||| |||||||||    
T  48274353 attattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 48274410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 8851211 - 8851159
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 13147502 - 13147458
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||    
T  13147502 attagagaaagttagtcccacccttaccttaatttagatgatcgg 13147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 16108077 - 16108021
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  16108077 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 16108021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 23664341 - 23664285
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 118  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  23664341 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 23664285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 37539317 - 37539381
Alignment:
Q  99 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||||||||| ||||| | ||||| | ||| | |||||||||||||||||| |||| ||||||    
T  37539317 attattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 37539381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 18744816 - 18744927
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  18744816 aatctaaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtccca 18744915  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  18744916 cccttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 23199317 - 23199207
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| ||||||||  || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  23199317 aatctaaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtccca 23199218  T
Q  271 cccttacctta 281  Q
    |||||||||||    
T  23199217 cccttacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 16063709 - 16063804
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16063709 ctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttaccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 70 - 277
Target Start/End: Complemental strand, 21399010 - 21398800
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||  |||  ||||| ||| |||||||||||||||| |||||| || |    
T  21399010 cccaaattttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacctactcttttgacaattaaatt 21398911  T
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactac----aaggttaaaccc-tttttcaaaattatacaacccattattagagaaagcta 264  Q
    |||||| ||| || ||||||||||| |||||||||||| ||| ||    |||||||||||| ||||||| |||||||| || ||| |||| |||| | ||    
T  21398910 caatct-accctattctctataacatcaaaactaacaacaacaacaacaaaggttaaacccttttttcagaattatac-actcatgattaaagaaggtta 21398813  T
Q  265 gtcccacccttac 277  Q
    |||||||||||||    
T  21398812 gtcccacccttac 21398800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 660732 - 660841
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||||  ||| ||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||     
T  660732 aatctaacccaaatttctataacatcaaaactaacaacaactacaaggttaaacc-tttttcagaattatacaaccccttattagagaaagctagtccc- 660829  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  660830 cccttaccttag 660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 1627178 - 1627071
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaa-aattatacaacccattattagagaaagctagtccc 269  Q
    ||||||||| |||| ||||||||| |||||||||||| || ||||||| ||||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  1627178 aatctaaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtccc 1627079  T
Q  270 acccttac 277  Q
    ||||||||    
T  1627078 acccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 6551384 - 6551289
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||  |  ||||||||||| ||||| ||||||||||||||    
T  6551384 ctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 17011750 - 17011806
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctcc 307  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17011750 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 17011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 32607417 - 32607315
Alignment:
Q  181 taatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacc 278  Q
    |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  32607417 taatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 32607319  T
Q  279 ttag 282  Q
    ||||    
T  32607318 ttag 32607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 31456982 - 31457040
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  31456982 attagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 31457040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 36508955 - 36508862
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 10774682 - 10774636
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10774682 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 10774636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 24068126 - 24068236
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaac-taacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||| ||||||||| ||| ||||||| || ||||| ||||| |||||||| ||||| |||||| ||  || ||||||||||||||||    
T  24068126 ttacgttaattcaatggtttacctactttttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaaggttaaac 24068225  T
Q  225 cctttttcaaa 235  Q
    |||||||||||    
T  24068226 cctttttcaaa 24068236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 233
Target Start/End: Original strand, 21503979 - 21504144
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||  |||| ||||||  ||||| |||||||||||| ||||||| || || |||  |||||||||||||| ||||||||||| ||||| |||| |    
T  21503979 cccaaattcaataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaa-tgaatt 21504077  T
Q  170 ---caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttca 233  Q
        ||| ||||| |||| ||||||||| ||||||||  || ||||||||  |||||||||||||||    
T  21504078 tgcaaatttaaccctaatttctataacatcaaaactactaacaactacaaacttaaaccctttttca 21504144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 21398752 - 21398630
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaa--actacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| ||||||||||||||  |  ||| | | || ||| |||| | ||| |||||||||||||||||||||||||| |||||||    
T  21398752 taaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaaccccctttttagaatcatacaacccattattagagaaagctaatcccacc 21398653  T
Q  273 cttaccttagtattgatgatcgg 295  Q
    ||||||||||  | |||||||||    
T  21398652 cttaccttagattagatgatcgg 21398630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 30616603 - 30616694
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||| || |||||| ||| |||||||  |  |||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||    
T  30616603 gttaaatccattttcagaatcatacaacttagaattagagaaagtcagtcccacccttaccataatattgatgatcggcggtctctctccct 30616694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 21554321 - 21554275
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21554321 tagtcccacccttaccttagtattgatgatcagcggtctctctccct 21554275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 21556967 - 21556921
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  21556967 tagtctcacccttaccttagtattgatgatcggcggtctctctccct 21556921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 29448862 - 29448920
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||| || | |||||||||||||||||||||| |||||||||||||    
T  29448862 attagagaaagttagtctcatcattaccttagtattgatgatcggtggtctctctccct 29448920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 20313266 - 20313328
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  20313266 gttaaaccctatttcagaattata-aacccactattagagaa-gctagtcccacccttaccttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 31621859 - 31621899
Alignment:
Q  117 caccaattattaccttaattcattggattacctactctttt 157  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  31621859 caccaattattaccttaattcatcggtttacctactctttt 31621899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 17011559 - 17011654
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  17011559 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 17011654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 17875927 - 17875990
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 17875990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 26832658 - 26832701
Alignment:
Q  266 tcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||| ||||||||||| || |||||||||||||||    
T  26832658 tcccacccttaccgtagtattgatggtcagcggtctctctccct 26832701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 265878 - 265964
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  |||||||| |||||||||||||||||    
T  265878 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactggattacctactcttt 265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 31621965 - 31622023
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccctta 276  Q
    ||||||||| |||| | ||| |||||||| |||||||||||||| |||| |||||||||    
T  31621965 gttaaacccatttttagaatcatacaaccaattattagagaaagatagttccaccctta 31622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 22240924 - 22240891
Alignment:
Q  276 accttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| ||||||||||||||    
T  22240924 accttagtattgatgatcgacggtctctctccct 22240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 22241920 - 22241887
Alignment:
Q  276 accttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| ||||||||||||||    
T  22241920 accttagtattgatgatcgacggtctctctccct 22241887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 22242916 - 22242883
Alignment:
Q  276 accttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| ||||||||||||||    
T  22242916 accttagtattgatgatcgacggtctctctccct 22242883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 22243912 - 22243879
Alignment:
Q  276 accttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||| ||||||||||||||    
T  22243912 accttagtattgatgatcgacggtctctctccct 22243879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 31622117 - 31622170
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||| |  ||||||||||| || |||||||||||||||||    
T  31622117 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 31622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 22111828 - 22111876
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttac 277  Q
    |||||||||||||||||| |  ||||||||||| || ||||||||||||    
T  22111828 tttcaaaattatacaaccaaaaattagagaaagttaatcccacccttac 22111876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 29448682 - 29448766
Alignment:
Q  72 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  |||||||||||| |||||||||||||    
T  29448682 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggtttacctactcttt 29448766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 281
Target Start/End: Original strand, 4832 - 4988
Alignment:
Q  126 ttaccttaattcattggattacc-tactcttttaacaattgaactcaatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaa 223  Q
    |||| |||||||| ||| ||||| |||||||| ||| ||| || ||||||||||| ||||| |||||||| |||||||||||| |||||| |||||||||    
T  4832 ttacgttaattcaatggtttaccctactctttcaacgattaaattcaatctaaccctaatcactataacatcaaaactaacaacaactacaaaggttaaa 4931  T
Q  224 ccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||    
T  4932 cccttttacagaattatacaa-ccattattagagaaagctagtcccacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 3528 - 3421
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  3528 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccct 3429  T
Q  275 taccttag 282  Q
    ||||||||    
T  3428 taccttag 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 2839 - 2934
Alignment:
Q  187 ctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2839 ctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 2654 - 2747
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   | ||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  2654 cccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 2747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 18217 - 18328
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||| | |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  18217 aatctaaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcaca 18316  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  18317 cccttaccttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 309
Target Start/End: Original strand, 23377 - 23614
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaac 160  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||            |||||||||||| |||    
T  23377 aacccttaccccaaattt-ataggaaactcttcctatgattattctacaatttgaacac-aattattacctt------------tacctactctttcaac 23462  T
Q  161 aattgaactcaa---tctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagag 257  Q
    |||| || |  |   ||||||| |||| ||| |||  |  |||||||||| |||| ||||||| ||||| |||| | | |||||||||||||||||||||    
T  23463 aattcaattttaaattctaaccttaatttctctaatcctcaaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagag 23562  T
Q  258 aaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  23563 aaagctagtcctacccttaccttagtattgatgatcggcagtctctttccct 23614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 40258 - 40160
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattat-aca-acccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||||||| ||| ||||||| ||||||||||||||| | |||||| | | || ||| ||||||||| | ||||||||||||||||||||    
T  40258 tctataacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccacccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 17627 - 17520
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||    
T  17627 taaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccct 17528  T
Q  275 taccttag 282  Q
    ||||||||    
T  17527 taccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 1022 - 1128
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccaccct 274  Q
    |||||||||| |||| |||| |||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  1022 taaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcaccct 1121  T
Q  275 tacctta 281  Q
    |||||||    
T  1122 tacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 278
Target Start/End: Original strand, 26650 - 26776
Alignment:
Q  152 tcttttaacaattgaactcaatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccatta 251  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||| ||||||| |||||||| |||||||||||||||| |||||||||||| |  |    
T  26650 tcttttaacaattaaattcaatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaa 26749  T
Q  252 ttagagaaagctagtcccacccttacc 278  Q
    |||||||||| || |||||||||||||    
T  26750 ttagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 23476 - 23666
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatct-aaccataatctctat 190  Q
    ||||| |||||||||||| ||||| | ||||| | |  |||||||||| |||||||||| |||||||||||  || |  ||| | || | |||  |||||    
T  23476 cctattattattctacaacctgaaaatcaattttcatgttaattcatttgattacctacacttttaacaataaaattgtaatttaaaacctaacttctat 23575  T
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||||||||  || ||||||||  ||||||||||||| | |||||||  || ||| |||| |||| |  |||||||||||||||||||    
T  23576 aacatcaaaactattaacaactacaaaattaaacccttttttagaattata-tactcatgattaaagaaggtcagtcccacccttaccttag 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 282
Target Start/End: Complemental strand, 14806 - 14585
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaaca 161  Q
    |||| |||||||||||| |||| ||||||  |||||  ||||||||||| ||||||  ||||| |||  |||||| ||| ||||||||||||||| ||||    
T  14806 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aaca 14708  T
Q  162 attgaactc--aatctaaccataatctctataa-caccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagaga 258  Q
    ||  || ||  || | || | |||| ||| ||| || |||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  14707 atc-aattccaaaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagaga 14609  T
Q  259 aagctagtcccacccttaccttag 282  Q
    ||||||||| ||||||||||||||    
T  14608 aagctagtctcacccttaccttag 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 282
Target Start/End: Complemental strand, 23864 - 23643
Alignment:
Q  62 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaaca 161  Q
    |||| |||||||||||| |||| ||||||  |||||  ||||||||||| ||||||  ||||| |||  |||||| ||| ||||||||||||||| ||||    
T  23864 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aaca 23766  T
Q  162 attgaactc--aatctaaccataatctctataa-caccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagaga 258  Q
    ||  || ||  || | || | |||| ||| ||| || |||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  23765 atc-aattccaaaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagaga 23667  T
Q  259 aagctagtcccacccttaccttag 282  Q
    ||||||||| ||||||||||||||    
T  23666 aagctagtctcacccttaccttag 23643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 6627 - 6468
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    |||||||||||||||| ||||||||||||  | ||| |||| || |||| |||||  |||  |||||||| ||||||||||||| |||||||||| || |    
T  6627 cccaaattttatagaacactcttcctata--tcttcaacaaccttaacatcaatttgtacactaattcat-ggattacctactcctttaacaattcaatt 6531  T
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactac-aaggttaaacccttttt 231  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  6530 caatctagccataatctctataacatcaaaactaacaacaactacaaaggttaaacccttttt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 13911 - 14002
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| |||||||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  13911 aacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttaccttag 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 2566 - 2454
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaacccttttt--caaaattatacaacccattattagagaaagctagtcc 268  Q
    ||||||||| |||| ||||||||| ||||||||| ||  |||||||||||||||| |||||  || ||||||||||||||||||||||||||||||||||    
T  2566 aatctaaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcc 2467  T
Q  269 cacccttacctta 281  Q
    |||||||||||||    
T  2466 cacccttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 18731 - 18626
Alignment:
Q  191 aacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattat-acaacccattattagagaaagctagtcccacccttaccttagtattgat 289  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  | |||    
T  18731 aacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccacccttaccttagattagat 18632  T
Q  290 gatcgg 295  Q
    ||||||    
T  18631 gatcgg 18626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 282
Target Start/End: Complemental strand, 16605 - 16418
Alignment:
Q  99 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaa---tctaaccataatctctataa-ca 194  Q
    |||||||| ||| || |||||||||||||||| ||||||||   |||||||||||||| ||||| | || |  |   ||||||| |||| ||| ||| ||    
T  16605 attattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatca 16506  T
Q  195 ccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
     |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| || || ||||||||||||||    
T  16505 tcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttag 16418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 282
Target Start/End: Complemental strand, 18885 - 18700
Alignment:
Q  102 attctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaa---tctaaccataatctctataa-cacca 197  Q
    ||||| ||| || |||||||||||||||| |||||||||  |||||||||||||| ||||| | || |  |   ||||||| |||| ||| ||| || ||    
T  18885 attctccaacctaaacaccaattattaccctaattcattatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatca 18786  T
Q  198 aaac-taacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
      || |||||| |||||||||| |||||| ||||| | ||||||||||| ||||||||||||||| || ||||||||| |||||||    
T  18785 tgacctaacaacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttag 18700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 18050 - 17926
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||  |  ||||||||||| ||||||||    
T  18050 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtccca 17951  T
Q  271 cccttaccttagtattgatgatcgg 295  Q
    ||||||||||||  | |||||||||    
T  17950 cccttaccttagattagatgatcgg 17926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 15725 - 15615
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||| | ||| |||||| |||||||||||| ||| ||||||||    
T  15725 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtccca 15627  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  15626 cccttaccttag 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 5415 - 5304
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    ||||||||| |||| ||||||||| |||||| ||||| ||||||||||||||||||||||| | |||||||||||  |  ||||||||||| ||||||||    
T  5415 aatctaaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtccca 5316  T
Q  271 cccttaccttag 282  Q
    ||||||||||||    
T  5315 cccttaccttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 2080 - 2173
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||||||| ||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  2080 cccaaatttgatagaaaaatctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaat 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 2236 - 2300
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  2236 gttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 8681 - 8897
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||||||||||| ||||| |||| ||| ||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||  |  |    
T  8681 cccaaatttgatagaaaactctacctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaatcaattt 8780  T
Q  170 caa--tctaaccataatctctataacaccaaaactaacaaa--aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctag 265  Q
     ||  || || | |||| |||  || | ||||| |||||||  ||| ||| | | || ||| |||||| ||| |||||| ||||||||||| ||||||||    
T  8781 taatttcaaaacctaatttctcaaaaatcaaaattaacaaaacaacaacatgttaaacccccttttcagaatcatacaatccattattagataaagctag 8880  T
Q  266 tcccacccttaccttag 282  Q
    ||||||||||| |||||    
T  8881 tcccacccttaacttag 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 19164 - 19260
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||  |  ||||||||||| ||||||||||||||| ||||    
T  19164 tctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 19118 - 19160
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctt 228  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||    
T  19118 tctataacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 127527 - 127342
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact--caatctaaccataatctctataacacca 197  Q
    |||||||||||| |||||  || |  |||| |||||||| ||| ||||||||||||| ||||||  |  |  |||  ||||| |||||||||||||| ||    
T  127527 ttattctacaatttgaacctcattccttacgttaattcaatggtttacctactctttcaacaatcaattttgcaaagtaaccctaatctctataacatca 127428  T
Q  198 aaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||| | ||||   ||||||||| |||| | ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  127427 aaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttag 127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 5611 - 5685
Alignment:
Q  209 aactacaaggttaaacccttttt--caaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  5611 aactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 59837 - 59655
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| || |||| ||||| |||  |||||||||||||||||||||| ||| ||||||  || | |||| ||| | |||| ||||||| | |||    
T  59837 ttattctacaacctaaacatcaatttttatattaattcattggattacctactatttcaacaatcaaattgcaatataaacctaatttctataatatcaa 59738  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| |||||||| |||||||||||||||| |||||||  || ||| |||| |||| | ||| ||||||||||||||||    
T  59737 aactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttagacccacccttaccttag 59655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 6390 - 6448
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6390 attagagaaagttagtcccacccttacattagtattgatgatcggcggtctctctccct 6448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 2285 - 2199
Alignment:
Q  196 caaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||  |  ||||||||||  ||||||||||||||||||||    
T  2285 caaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 21119 - 21177
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21119 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 21177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 34134 - 34192
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34134 attagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 34192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 20928 - 21023
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  20928 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 66135 - 66061
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgat 292  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  66135 gttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgat 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 66290 - 66205
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  66290 cccaaatttgatagaaa-ctctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactcttt 66205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 111344 - 111413
Alignment:
Q  213 acaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||| ||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttag 111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 75926 - 75990
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  75926 gttaaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttaccttag 75990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 73076 - 73139
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||||||| |||| | ||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  73076 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 21380 - 21473
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| ||||||||||    |||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  21380 cccaaatttgatagaaaacttaaactatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 282
Target Start/End: Original strand, 21633 - 21664
Alignment:
Q  251 attagagaaagctagtcccacccttaccttag 282  Q
    ||||||||||||||||||||||||||||||||    
T  21633 attagagaaagctagtcccacccttaccttag 21664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 5051 - 5109
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  5051 attagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccct 5109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 3068 - 3257
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctata 191  Q
    ||||| ||||||||| || | ||||| ||||| |||   |||||||||| ||||||||| |||| ||||||| || | |||| ||| | |||  ||||||    
T  3068 cctattattattctaaaaccagaacatcaatttttatactaattcattgaattacctacactttcaacaattaaattgcaatttaaacctaacttctata 3167  T
Q  192 acaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||| |||||||| ||| ||||||||  ||||||||||||||| |||||||  || ||| |||| |||| | ||||||||||||||||||||    
T  3168 acatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 5051 - 5109
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  5051 attagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccct 5109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 5445 - 5507
Alignment:
Q  220 taaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttag 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 19801 - 19922
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| |||||||||||||||||||||| ||||||| |||    
T  19801 taaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacc 19899  T
Q  273 cttaccttagtattgatgatcgg 295  Q
    ||||||||||  | |||||||||    
T  19900 cttaccttagattagatgatcgg 19922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 11605 - 11668
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    |||||||||||||||| |||||||||||||||| |||||||||  |||||||||||||| ||||    
T  11605 gttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 13674 - 13717
Alignment:
Q  266 tcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||| ||||||||||| || |||||||||||||||    
T  13674 tcccacccttaccgtagtattgatggtcagcggtctctctccct 13717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 29208 - 29318
Alignment:
Q  126 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaaa-ctaacaaaaactacaaggttaaac 224  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| |||  || ||||||||||||||||    
T  29208 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccttaatctctttaacatcaaaacctattaacaactacaaggttaaac 29307  T
Q  225 cctttttcaaa 235  Q
    |||||||||||    
T  29308 cctttttcaaa 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 69883 - 69825
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  69883 attagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccct 69825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 70074 - 69979
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  || |||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  70074 aacccaaatcccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 69979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 10893 - 10999
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| |||||||||||||| | ||||   |||||||||||||| | ||| |||||||||||||||||||||||||||| |||||    
T  10893 taaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacc 10990  T
Q  273 cttacctta 281  Q
    |||||||||    
T  10991 cttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 21962 - 22055
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||| ||||||    
T  21962 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 9912 - 9958
Alignment:
Q  117 caccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||    
T  9912 caccaattattaccttaattcatcagattacctactctttcaacaat 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 9093 - 9141
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccctat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9093 tagtcccacccttaccttagtattgatgatcggcggtctctctccctat 9141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 35249 - 35185
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35249 gttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 282
Target Start/End: Complemental strand, 6716 - 6504
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 169  Q
    ||||||||| |||||||||||| | ||| |||| |||||||  ||||||| |||||||||||||||||||   |||||||||||||| ||||||  |  |    
T  6716 cccaaatttgatagaaaactctacttatgattactctacaacatgaacacgaattattaccttaattcatctaattacctactctttcaacaatcaattt 6617  T
Q  170 caa--tctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
     ||  || || | |||| |||  |  | ||||| |||| ||||| || | ||||||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  6616 taatttcaaaacctaatttctcaacaatcaaaattaac-aaaacaac-atgttaaaccccttttcagaatcatacaacccattattagagaaaggtagtc 6519  T
Q  268 ccacccttaccttag 282  Q
    || || |||||||||    
T  6518 ccgcctttaccttag 6504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 8853 - 8732
Alignment:
Q  175 taaccataatctctataacaccaaaactaacaaaaactacaa--ggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacc 272  Q
    ||||| |||| ||||||||| |||||||||||||| | ||||  |||| ||||| |||| | ||| ||||||||||||||||||| ||||||||| ||||    
T  8853 taaccctaatttctataacatcaaaactaacaaaa-caacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacc 8755  T
Q  273 cttaccttagtattgatgatcgg 295  Q
    ||||||||||  | |||||||||    
T  8754 cttaccttagattagatgatcgg 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 8979 - 8916
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||||| ||||||| ||||| |||| |||||||||| || |||||||||| | ||||||    
T  8979 ttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaat 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 61940 - 61834
Alignment:
Q  188 tataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattg 287  Q
    ||||||| |||||||||||| ||||||||||||||| || |||||| |||||||||||  |  ||||||||||| ||||| ||||||||||||||  | |    
T  61940 tataacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattag 61842  T
Q  288 atgatcgg 295  Q
    ||||||||    
T  61841 atgatcgg 61834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 11245 - 11303
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  11245 attagagaaagttagactcacccttaccttagtattgatgatcggcggtctctctccct 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 8982 - 9040
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  8982 attagagaaagttagtcccacccttaccttagtattgatgatcggtggtcactctccct 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 8802 - 8886
Alignment:
Q  72 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  8802 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 15294 - 15352
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||    
T  15294 attagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccct 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 21807 - 21749
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  21807 attagagaaagttagtcccatccttaccttagtattgatgatcggtggtctctctccct 21749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 21998 - 21903
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||| ||||| |||  ||||||||||| ||||||||||||||    
T  21998 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt 21903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29246 - 29188
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29246 attagagaaagttagtcccactcttaccttagtattgatgatcgacggtctctctccct 29188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 29437 - 29342
Alignment:
Q  61 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  29437 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 29342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 11271 - 11160
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggt--taaaccctttttcaaaattatacaacccattattagagaaagctagtcc 268  Q
    ||||||||| |||| | ||||||| |||||||||||||| | ||||  |  ||||||| |||| | ||| ||||||||||||||||||||||||||||||    
T  11271 aatctaaccctaatttatataacatcaaaactaacaaaa-caacaacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcc 11173  T
Q  269 cacccttacctta 281  Q
    || ||||||||||    
T  11172 catccttacctta 11160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 365 - 426
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  365 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 6398 - 6471
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||| |||||||||| ||||| ||||| |||||||||||||||||||||  |||||||||||||    
T  6398 aactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttag 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 282
Target Start/End: Original strand, 28583 - 28766
Alignment:
Q  99 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaa-ctcaatctaaccataatctctataacacca 197  Q
    |||||||||||| ||||||| ||||| |||  |||||||||| |||||||||| |||| ||||||  ||  ||||| ||||| ||||  ||||||||  |    
T  28583 attattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaatcaaatttcaatttaaccctaattcctataacaata 28682  T
Q  198 aaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||  || ||||||||| |||||| |||||||| |||||||  ||  || |||| |||| | ||||||||| ||||||||||    
T  28683 aaactattaacaactacaagattaaacgctttttcagaattata-tacttatgattaaagaaggttagtcccactcttaccttag 28766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 5331 - 5374
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5331 tagtcccacccttaccttagtattgatgatcggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 12351 - 12394
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12351 tagtcccacccttaccttagtattgatgatcggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 40047 - 40160
Alignment:
Q  170 caatctaaccataatctctataacaccaaaactaacaaaaactacaag--gttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 267  Q
    |||| ||||| |||| ||||||||| |||||||||||||| | ||||   ||||||||| |||| | ||| ||||||||||||||||||||||| |||||    
T  40047 caatttaaccctaatttctataacatcaaaactaacaaaa-caacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtc 40145  T
Q  268 ccacccttaccttag 282  Q
     || |||||||||||    
T  40146 gcatccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 16977 - 17158
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||  || | |||  ||| | |||| ||||||| | | |    
T  16977 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaattaaacctaatttctataatatc-a 17075  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| |||||||| |||||||||||||| | |||||||  || ||| |||| ||||   | ||||||||||||||||||    
T  17076 aactatcaacaactacaaagttaaaccctttttaagaattata-tactcatgattaaagaagattcgtcccacccttaccttag 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 26508 - 26689
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||  || | |||  ||| | |||| ||||||| | | |    
T  26508 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaattaaacctaatttctataatatc-a 26606  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| |||||||| |||||||||||||| | |||||||  || ||| |||| ||||   | ||||||||||||||||||    
T  26607 aactatcaacaactacaaagttaaaccctttttaagaattata-tactcatgattaaagaagattcgtcccacccttaccttag 26689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 1959 - 2017
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  1959 attagataaagttagtcccaccctttccttagtattgatgatcggtggtctctctccct 2017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 1165 - 1245
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||| |||||||||||  |  |||||  |||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  1165 tttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttagtattgataatcggcggtctctctccct 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 23992 - 23932
Alignment:
Q  171 aatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaacccttttt 231  Q
    ||||||||| |||| ||||||||| ||||||||| || |||||||||||||||||||||||    
T  23992 aatctaaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 23925 - 23893
Alignment:
Q  248 attattagagaaagctagtcccacccttacctt 280  Q
    |||||||||||||||||||| ||||||||||||    
T  23925 attattagagaaagctagtctcacccttacctt 23893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| |||| | ||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 43848 - 43786
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  43848 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 39145 - 39094
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  39145 tttcataattata-aacccattattagagaa-gctagtcccacccttaccttag 39094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 5400 - 5446
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  5400 tagtcccacccttaccttagaattaatgatcggcggtctctctccct 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 14991 - 15037
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  14991 tagtcccaccctcaccttagtattgatgatcgacggtctctctccct 15037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 17011 - 17057
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17011 tagtcccaccctcaccttagtattgatgatcgacggtctctctccct 17057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 10576 - 10636
Alignment:
Q  209 aactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtccca 270  Q
    |||||||| |||||||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  10576 aactacaatgttaaaccctttttcagaattatacaa-ccatctttagagaaagctagtccca 10636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 5677 - 5615
Alignment:
Q  218 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    |||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5677 gttaaatcctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 1475 - 1518
Alignment:
Q  266 tcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  1475 tcccacccttaccttagtattgatgatcggcggcctgtctccct 1518  T

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Target: scaffold0439 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 12104 - 12167
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 156  Q
    ||||| |||||||||||| ||||||| ||||| |||  |||||||||||| |||||||||||||    
T  12104 cctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt 12167  T

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Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 7695 - 7513
Alignment:
Q  100 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact-caatctaaccataatctctataacaccaa 198  Q
    ||||||||||| ||||||| ||||| | || ||||||||||||||| |||||  ||  ||||||  || | ||||  || | |||  ||||||||| |||    
T  7695 ttattctacaacctgaacatcaattttcacgttaattcattggatttcctacatttccaacaatcaaatttcaattaaaacctaacttctataacatcaa 7596  T
Q  199 aactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| ||| ||||| ||  ||||||||||||||| ||| |||  || ||| |||| |||| | ||||||||||||||||||||    
T  7595 aactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttaccttag 7513  T

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Target: scaffold0156 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 16638 - 16684
Alignment:
Q  263 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 309  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||    
T  16638 tagtcccaccctttgcttagtattgatgatcgtcggtctctctccct 16684  T

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Target: scaffold1800 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 446 - 660
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaatt--attaccttaattcattggattacctactcttttaacaattgaa 167  Q
    ||||||||| |||||||||  | |||||  ||||||||||| | ||||| |||||  ||||  ||||||||||| ||||||||| |||| ||||||  ||    
T  446 cccaaatttgatagaaaacattacctattgttattctacaacccgaacatcaattgtattatattaattcattgaattacctacactttcaacaatcaaa 545  T
Q  168 ct-caatctaaccataatctctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagt 266  Q
     | ||||  || | |||  ||||||||| ||||| || ||| ||| ||||  ||||||| ||||| | |||||||  || ||| |||| |||| | ||||    
T  546 ttgcaattcaaacctaacttctataacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattata-gactcatgattaaagaaggttagt 644  T
Q  267 cccacccttaccttag 282  Q
    ||||||||||||||||    
T  645 cccacccttaccttag 660  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 35332 - 35424
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 162  Q
    ||||||||  |||| ||||||  |||||  ||||||||||| ||||||| ||||| |||  |||||| |||||||||| ||| ||||||||||    
T  35332 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattggattacatacacttttaacaa 35424  T

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Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 38536 - 38441
Alignment:
Q  186 tctataacaccaaaactaacaaaaactacaaggttaaaccctttttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||||||| ||||||||  || ||||||||  ||||||||||||||| |||||||  || ||| |||| |||| | ||||| ||||||||||||||    
T  38536 tctataacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacacccttaccttag 38441  T

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Target: scaffold0256 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 2030 - 1971
Alignment:
Q  93 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctact 152  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||||  ||||| |||||    
T  2030 cctatgattattctacaacatgaacaccacttattaccttaattcatcagattatctact 1971  T

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Target: scaffold1941 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 138 - 191
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  138 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 191  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 2889 - 2942
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttaccttag 282  Q
    ||||| |||||||||||| |  ||||||||||| || |||||||||||||||||    
T  2889 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 106373 - 106280
Alignment:
Q  70 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 163  Q
    ||||||||| |||| |||||   ||||  |||||| ||||| |||||||  |||||||||||||||||||   ||||||| |||||| ||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaacaataattattaccttaattcatcaaattaccttctctttcaacaat 106280  T

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Target: scaffold1633 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 58768 - 58812
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagtattgatgatcgg 295  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||    
T  58768 attagagaaagttagtcccacccttaccttaatttagatgatcgg 58812  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 117837 - 117805
Alignment:
Q  251 attagagaaagctagtcccacccttaccttagt 283  Q
    ||||||||||| |||||||||||||||||||||    
T  117837 attagagaaagttagtcccacccttaccttagt 117805  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  229 tttcaaaattatacaacccattattagagaaagctagtcccacccttacctta 281  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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