View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19314_low_10 (Length: 310)

Name: NF19314_low_10
Description: NF19314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19314_low_10
NF19314_low_10
[»] chr8 (47 HSPs)
chr8 (17-293)||(33173011-33173285)
chr8 (214-289)||(33610358-33610433)
chr8 (225-285)||(18040927-18040987)
chr8 (226-285)||(31590807-31590866)
chr8 (214-289)||(37651813-37651887)
chr8 (215-281)||(23159030-23159096)
chr8 (226-288)||(26012280-26012342)
chr8 (227-288)||(23223338-23223399)
chr8 (225-289)||(29307284-29307349)
chr8 (225-289)||(23351016-23351080)
chr8 (225-289)||(24908598-24908662)
chr8 (225-289)||(24910819-24910883)
chr8 (224-286)||(22735204-22735266)
chr8 (215-289)||(23218668-23218741)
chr8 (227-285)||(45464501-45464559)
chr8 (225-289)||(19330723-19330787)
chr8 (225-289)||(22723937-22724001)
chr8 (225-289)||(24240403-24240466)
chr8 (215-289)||(24278635-24278710)
chr8 (225-289)||(25297005-25297070)
chr8 (225-289)||(25759025-25759090)
chr8 (225-288)||(41506245-41506305)
chr8 (225-289)||(45558315-45558377)
chr8 (225-289)||(33529272-33529336)
chr8 (225-288)||(5855400-5855463)
chr8 (214-289)||(24968658-24968732)
chr8 (227-289)||(17502975-17503036)
chr8 (215-285)||(22888584-22888653)
chr8 (225-286)||(23150647-23150709)
chr8 (227-286)||(39446084-39446145)
chr8 (225-289)||(17286020-17286082)
chr8 (215-267)||(22496605-22496657)
chr8 (225-289)||(22745520-22745583)
chr8 (213-289)||(23151153-23151227)
chr8 (244-288)||(31193683-31193727)
chr8 (215-286)||(38534519-38534591)
chr8 (225-288)||(15934039-15934102)
chr8 (225-286)||(21258854-21258916)
chr8 (225-282)||(24551968-24552022)
chr8 (253-289)||(22221701-22221737)
chr8 (253-289)||(22228043-22228079)
chr8 (214-286)||(22982137-22982209)
chr8 (225-289)||(23157639-23157701)
chr8 (235-282)||(27232445-27232491)
chr8 (225-286)||(26696023-26696084)
chr8 (225-289)||(24625636-24625700)
chr8 (244-288)||(25710443-25710487)
[»] chr6 (38 HSPs)
chr6 (205-289)||(33537686-33537770)
chr6 (214-289)||(22461477-22461552)
chr6 (225-289)||(17082518-17082582)
chr6 (215-289)||(18506716-18506790)
chr6 (227-289)||(23223571-23223633)
chr6 (224-289)||(116445-116510)
chr6 (225-289)||(25654978-25655042)
chr6 (225-288)||(21932027-21932090)
chr6 (235-289)||(15004293-15004347)
chr6 (215-289)||(15889097-15889171)
chr6 (227-289)||(17547050-17547112)
chr6 (227-285)||(22848859-22848917)
chr6 (225-285)||(32352819-32352879)
chr6 (243-289)||(18628944-18628990)
chr6 (225-286)||(15079086-15079147)
chr6 (225-286)||(35135352-35135413)
chr6 (225-289)||(22582138-22582202)
chr6 (225-289)||(22584928-22584992)
chr6 (225-289)||(22589759-22589823)
chr6 (226-289)||(25920424-25920486)
chr6 (215-286)||(33325539-33325610)
chr6 (225-267)||(29157848-29157890)
chr6 (228-289)||(14153098-14153158)
chr6 (214-289)||(29606226-29606302)
chr6 (214-288)||(14672269-14672343)
chr6 (227-289)||(22578446-22578507)
chr6 (210-264)||(34967675-34967729)
chr6 (214-289)||(13014030-13014106)
chr6 (248-289)||(19854929-19854970)
chr6 (235-287)||(14128950-14129001)
chr6 (227-267)||(19171394-19171434)
chr6 (215-267)||(31466925-31466976)
chr6 (214-287)||(14355801-14355874)
chr6 (244-289)||(16596880-16596925)
chr6 (225-286)||(21410391-21410452)
chr6 (228-289)||(27752281-27752340)
chr6 (261-289)||(18027865-18027893)
chr6 (225-273)||(21265738-21265786)
[»] chr4 (39 HSPs)
chr4 (215-285)||(10375327-10375397)
chr4 (215-289)||(47467706-47467780)
chr4 (225-289)||(13589463-13589527)
chr4 (226-289)||(7185206-7185269)
chr4 (225-288)||(15212954-15213017)
chr4 (214-285)||(41916127-41916198)
chr4 (214-300)||(14902061-14902149)
chr4 (225-289)||(40904301-40904364)
chr4 (225-289)||(49072506-49072570)
chr4 (215-286)||(30231832-30231903)
chr4 (225-289)||(13438402-13438465)
chr4 (225-289)||(31635380-31635444)
chr4 (225-285)||(50219339-50219398)
chr4 (235-286)||(37956376-37956427)
chr4 (225-286)||(27961820-27961881)
chr4 (225-289)||(19560177-19560240)
chr4 (227-289)||(10236665-10236726)
chr4 (247-289)||(12132996-12133038)
chr4 (243-285)||(18235610-18235652)
chr4 (225-286)||(18493453-18493515)
chr4 (226-288)||(36990279-36990340)
chr4 (225-289)||(15012632-15012694)
chr4 (225-285)||(54399177-54399240)
chr4 (226-286)||(13808852-13808911)
chr4 (225-285)||(15045676-15045736)
chr4 (225-285)||(15108688-15108748)
chr4 (229-289)||(19821124-19821183)
chr4 (225-289)||(41255715-41255778)
chr4 (225-288)||(18277223-18277286)
chr4 (225-285)||(12244253-12244311)
chr4 (228-289)||(13722420-13722481)
chr4 (253-289)||(13247276-13247312)
chr4 (228-288)||(15712191-15712253)
chr4 (227-288)||(54362622-54362683)
chr4 (244-288)||(10103644-10103688)
chr4 (244-288)||(15674483-15674527)
chr4 (244-288)||(31133139-31133183)
chr4 (244-288)||(33241525-33241569)
chr4 (253-289)||(53704102-53704138)
[»] chr5 (29 HSPs)
chr5 (228-300)||(23233905-23233977)
chr5 (215-289)||(6457444-6457517)
chr5 (215-285)||(11966126-11966196)
chr5 (217-285)||(5621150-5621218)
chr5 (215-286)||(3674733-3674804)
chr5 (225-286)||(23467302-23467363)
chr5 (229-289)||(21215810-21215870)
chr5 (225-289)||(23418087-23418151)
chr5 (225-289)||(37984211-37984275)
chr5 (226-289)||(16834691-16834753)
chr5 (227-289)||(19874549-19874611)
chr5 (225-289)||(21222006-21222070)
chr5 (215-286)||(19349882-19349953)
chr5 (213-285)||(26559179-26559253)
chr5 (227-289)||(11762868-11762929)
chr5 (243-289)||(22662045-22662091)
chr5 (225-286)||(32965057-32965118)
chr5 (225-289)||(433298-433361)
chr5 (225-289)||(5450157-5450220)
chr5 (225-285)||(21110568-21110627)
chr5 (225-289)||(24224743-24224807)
chr5 (215-286)||(16596340-16596411)
chr5 (227-288)||(22886408-22886468)
chr5 (225-285)||(3420368-3420428)
chr5 (225-289)||(24084680-24084743)
chr5 (227-285)||(7729291-7729349)
chr5 (225-289)||(2032644-2032706)
chr5 (254-289)||(28262312-28262347)
chr5 (253-289)||(1167582-1167618)
[»] scaffold0022 (2 HSPs)
scaffold0022 (214-289)||(67343-67418)
scaffold0022 (225-289)||(132652-132715)
[»] chr7 (40 HSPs)
chr7 (214-289)||(45146178-45146253)
chr7 (225-289)||(9723196-9723260)
chr7 (227-289)||(21675119-21675181)
chr7 (225-289)||(14268242-14268307)
chr7 (225-289)||(9251253-9251317)
chr7 (225-285)||(33560465-33560525)
chr7 (225-289)||(9318932-9318996)
chr7 (225-289)||(9612155-9612219)
chr7 (225-289)||(9839726-9839790)
chr7 (225-289)||(20582950-20583014)
chr7 (215-287)||(31502013-31502084)
chr7 (225-288)||(45150378-45150441)
chr7 (215-289)||(13448183-13448256)
chr7 (227-289)||(34240545-34240606)
chr7 (215-285)||(46474764-46474834)
chr7 (216-289)||(39285560-39285632)
chr7 (225-289)||(13352772-13352836)
chr7 (215-286)||(13275623-13275694)
chr7 (215-289)||(28392518-28392591)
chr7 (215-288)||(16914313-16914386)
chr7 (228-288)||(48357433-48357493)
chr7 (243-286)||(49047033-49047076)
chr7 (226-288)||(6321725-6321787)
chr7 (225-289)||(38424930-38424994)
chr7 (225-289)||(14935969-14936031)
chr7 (225-289)||(15363562-15363624)
chr7 (213-269)||(18078877-18078933)
chr7 (226-289)||(28722896-28722960)
chr7 (225-288)||(16920352-16920415)
chr7 (253-289)||(12759844-12759880)
chr7 (253-289)||(45451525-45451561)
chr7 (225-288)||(13378317-13378380)
chr7 (215-289)||(13390170-13390245)
chr7 (225-288)||(17923302-17923365)
chr7 (226-288)||(10331898-10331958)
chr7 (215-289)||(17984176-17984249)
chr7 (226-283)||(17223390-17223446)
chr7 (244-288)||(295363-295407)
chr7 (253-289)||(11580132-11580168)
chr7 (244-288)||(36024967-36025011)
[»] chr3 (61 HSPs)
chr3 (226-289)||(38375062-38375125)
chr3 (225-289)||(17758062-17758126)
chr3 (225-289)||(19059382-19059446)
chr3 (215-286)||(39657391-39657462)
chr3 (225-299)||(17586273-17586346)
chr3 (215-285)||(31411022-31411092)
chr3 (216-289)||(33368317-33368390)
chr3 (217-285)||(21166437-21166505)
chr3 (211-286)||(38810315-38810390)
chr3 (225-289)||(43426906-43426969)
chr3 (226-289)||(13300789-13300852)
chr3 (243-289)||(9150158-9150204)
chr3 (235-289)||(13311454-13311508)
chr3 (215-289)||(25103346-25103419)
chr3 (215-288)||(34560644-34560717)
chr3 (225-286)||(40939993-40940054)
chr3 (226-289)||(8605662-8605724)
chr3 (238-289)||(10913703-10913754)
chr3 (214-288)||(8632622-8632695)
chr3 (215-289)||(11514863-11514936)
chr3 (225-286)||(14081343-14081404)
chr3 (227-288)||(17192356-17192417)
chr3 (225-289)||(18970733-18970797)
chr3 (244-289)||(50111409-50111454)
chr3 (225-288)||(12032329-12032392)
chr3 (227-294)||(12530848-12530914)
chr3 (215-286)||(14058549-14058620)
chr3 (226-288)||(15521808-15521871)
chr3 (225-288)||(17205489-17205552)
chr3 (225-286)||(12487116-12487178)
chr3 (240-286)||(17140357-17140403)
chr3 (244-289)||(9590096-9590141)
chr3 (225-286)||(11060326-11060387)
chr3 (215-288)||(20421660-20421733)
chr3 (225-288)||(16880976-16881040)
chr3 (225-288)||(18747932-18747996)
chr3 (225-284)||(47784080-47784138)
chr3 (215-289)||(11832264-11832338)
chr3 (225-289)||(3578922-3578987)
chr3 (212-288)||(11328289-11328366)
chr3 (244-289)||(12348650-12348695)
chr3 (228-289)||(12559562-12559623)
chr3 (225-289)||(11403420-11403484)
chr3 (225-289)||(15879182-15879245)
chr3 (225-289)||(17394200-17394264)
chr3 (225-289)||(40038295-40038359)
chr3 (225-288)||(4161590-4161652)
chr3 (214-288)||(3575820-3575893)
chr3 (215-285)||(48422420-48422489)
chr3 (228-289)||(6146100-6146161)
chr3 (228-289)||(6153657-6153718)
chr3 (214-271)||(6713204-6713261)
chr3 (225-285)||(11881591-11881649)
chr3 (228-289)||(16995413-16995474)
chr3 (240-277)||(30208054-30208090)
chr3 (248-289)||(41662380-41662421)
chr3 (225-274)||(55193514-55193563)
chr3 (244-288)||(6224461-6224505)
chr3 (261-289)||(13836470-13836498)
chr3 (253-289)||(16181297-16181333)
chr3 (253-289)||(54037486-54037522)
[»] chr2 (39 HSPs)
chr2 (215-289)||(24278577-24278651)
chr2 (225-299)||(9638211-9638285)
chr2 (214-286)||(19433137-19433209)
chr2 (215-286)||(68840-68911)
chr2 (225-288)||(723233-723296)
chr2 (225-288)||(6095471-6095534)
chr2 (226-289)||(19660745-19660808)
chr2 (225-288)||(19667392-19667455)
chr2 (225-289)||(43646704-43646766)
chr2 (225-289)||(16292190-16292254)
chr2 (244-289)||(24841728-24841773)
chr2 (227-289)||(25595838-25595899)
chr2 (224-289)||(7322374-7322438)
chr2 (213-285)||(16446596-16446668)
chr2 (225-289)||(11010499-11010562)
chr2 (243-283)||(22579238-22579278)
chr2 (225-288)||(24086770-24086834)
chr2 (225-289)||(24885506-24885572)
chr2 (215-285)||(2155188-2155258)
chr2 (226-288)||(19668467-19668527)
chr2 (225-264)||(24293862-24293901)
chr2 (214-288)||(22762674-22762749)
chr2 (227-288)||(45572795-45572855)
chr2 (227-288)||(45576462-45576522)
chr2 (227-288)||(45580129-45580189)
chr2 (227-288)||(45583796-45583856)
chr2 (227-288)||(45587463-45587523)
chr2 (227-288)||(45591130-45591190)
chr2 (227-288)||(45594797-45594857)
chr2 (227-288)||(45598464-45598524)
chr2 (227-288)||(45602131-45602191)
chr2 (227-288)||(45605798-45605858)
chr2 (227-288)||(45609465-45609525)
chr2 (227-288)||(45613132-45613192)
chr2 (227-288)||(45616799-45616859)
chr2 (225-289)||(2615-2679)
chr2 (253-289)||(22863758-22863794)
chr2 (261-289)||(23836066-23836094)
chr2 (253-289)||(25602893-25602929)
[»] scaffold0049 (1 HSPs)
scaffold0049 (227-289)||(32791-32853)
[»] scaffold1932 (1 HSPs)
scaffold1932 (225-289)||(743-806)
[»] scaffold0130 (1 HSPs)
scaffold0130 (201-289)||(26338-26425)
[»] chr1 (26 HSPs)
chr1 (225-289)||(33398136-33398200)
chr1 (215-285)||(5767553-5767623)
chr1 (215-289)||(16646779-16646853)
chr1 (225-286)||(22828761-22828822)
chr1 (226-285)||(8537319-8537376)
chr1 (226-285)||(8602558-8602615)
chr1 (225-289)||(20839180-20839243)
chr1 (225-289)||(25094676-25094739)
chr1 (225-289)||(36355608-36355672)
chr1 (226-289)||(5470360-5470423)
chr1 (214-289)||(38033008-38033083)
chr1 (226-289)||(52401417-52401479)
chr1 (214-279)||(19603966-19604031)
chr1 (225-289)||(17023790-17023854)
chr1 (225-288)||(17609718-17609781)
chr1 (225-289)||(37233225-37233289)
chr1 (226-285)||(49996626-49996684)
chr1 (215-289)||(21424041-21424115)
chr1 (225-289)||(75783-75847)
chr1 (227-288)||(9783415-9783475)
chr1 (226-286)||(18851787-18851846)
chr1 (225-277)||(20177976-20178028)
chr1 (225-264)||(22142691-22142730)
chr1 (225-266)||(21195812-21195853)
chr1 (228-289)||(49968503-49968564)
chr1 (253-289)||(21719094-21719130)
[»] scaffold0406 (1 HSPs)
scaffold0406 (226-285)||(14832-14891)
[»] scaffold0561 (1 HSPs)
scaffold0561 (227-285)||(2314-2372)
[»] scaffold0025 (3 HSPs)
scaffold0025 (227-289)||(86348-86410)
scaffold0025 (244-288)||(9674-9718)
scaffold0025 (224-288)||(54122-54185)
[»] scaffold1092 (1 HSPs)
scaffold1092 (213-289)||(2500-2574)
[»] scaffold0357 (1 HSPs)
scaffold0357 (225-289)||(7203-7267)
[»] scaffold0193 (1 HSPs)
scaffold0193 (225-285)||(5392-5452)
[»] scaffold0149 (1 HSPs)
scaffold0149 (215-279)||(32729-32793)
[»] scaffold0058 (1 HSPs)
scaffold0058 (214-286)||(69643-69715)
[»] scaffold0057 (1 HSPs)
scaffold0057 (214-280)||(6669-6735)
[»] scaffold0006 (1 HSPs)
scaffold0006 (225-287)||(196647-196709)
[»] scaffold0342 (1 HSPs)
scaffold0342 (225-286)||(13136-13197)
[»] scaffold0153 (1 HSPs)
scaffold0153 (225-294)||(9278-9346)
[»] scaffold0700 (1 HSPs)
scaffold0700 (225-289)||(3314-3378)
[»] scaffold0601 (1 HSPs)
scaffold0601 (225-289)||(243-307)
[»] scaffold0387 (1 HSPs)
scaffold0387 (226-289)||(324-388)
[»] scaffold0385 (1 HSPs)
scaffold0385 (225-289)||(11994-12057)
[»] scaffold0165 (1 HSPs)
scaffold0165 (225-289)||(30778-30842)
[»] scaffold0123 (1 HSPs)
scaffold0123 (212-288)||(11741-11817)
[»] scaffold0080 (1 HSPs)
scaffold0080 (225-289)||(23081-23144)
[»] scaffold0231 (1 HSPs)
scaffold0231 (225-288)||(12057-12120)
[»] scaffold0610 (1 HSPs)
scaffold0610 (227-285)||(9432-9490)
[»] scaffold0162 (1 HSPs)
scaffold0162 (240-289)||(6408-6457)
[»] scaffold0020 (1 HSPs)
scaffold0020 (215-288)||(108823-108895)
[»] scaffold0004 (3 HSPs)
scaffold0004 (225-289)||(87172-87234)
scaffold0004 (225-288)||(28288-28350)
scaffold0004 (235-288)||(192847-192900)
[»] scaffold0634 (1 HSPs)
scaffold0634 (233-289)||(6234-6289)
[»] scaffold0389 (1 HSPs)
scaffold0389 (225-289)||(11319-11382)
[»] scaffold0028 (1 HSPs)
scaffold0028 (225-289)||(80404-80467)
[»] scaffold0012 (1 HSPs)
scaffold0012 (215-267)||(180256-180308)
[»] scaffold0032 (1 HSPs)
scaffold0032 (226-288)||(103938-104001)
[»] scaffold0026 (1 HSPs)
scaffold0026 (214-289)||(89197-89271)
[»] scaffold0315 (1 HSPs)
scaffold0315 (215-289)||(11859-11933)
[»] scaffold0095 (1 HSPs)
scaffold0095 (227-286)||(33046-33107)
[»] scaffold0010 (1 HSPs)
scaffold0010 (215-289)||(31835-31909)
[»] scaffold0507 (1 HSPs)
scaffold0507 (225-289)||(912-974)
[»] scaffold0151 (1 HSPs)
scaffold0151 (225-289)||(21732-21795)
[»] scaffold0009 (1 HSPs)
scaffold0009 (225-288)||(70276-70339)
[»] scaffold0589 (1 HSPs)
scaffold0589 (225-286)||(8651-8713)
[»] scaffold0014 (2 HSPs)
scaffold0014 (240-286)||(160166-160212)
scaffold0014 (215-286)||(202194-202265)
[»] scaffold1295 (1 HSPs)
scaffold1295 (225-289)||(916-978)
[»] scaffold0808 (1 HSPs)
scaffold0808 (229-286)||(1637-1693)
[»] scaffold0090 (1 HSPs)
scaffold0090 (244-293)||(33839-33887)
[»] scaffold0031 (1 HSPs)
scaffold0031 (244-289)||(71477-71522)
[»] scaffold0598 (1 HSPs)
scaffold0598 (225-288)||(4027-4088)
[»] scaffold0183 (1 HSPs)
scaffold0183 (225-277)||(11853-11905)
[»] scaffold0116 (1 HSPs)
scaffold0116 (253-289)||(30946-30982)
[»] scaffold0083 (1 HSPs)
scaffold0083 (253-289)||(15695-15731)
[»] scaffold1272 (1 HSPs)
scaffold1272 (225-287)||(1099-1161)
[»] scaffold0120 (1 HSPs)
scaffold0120 (259-289)||(22361-22391)
[»] scaffold0092 (1 HSPs)
scaffold0092 (225-286)||(4165-4227)
[»] scaffold0017 (1 HSPs)
scaffold0017 (226-288)||(13618-13680)
[»] scaffold0013 (1 HSPs)
scaffold0013 (227-289)||(36290-36352)
[»] scaffold0643 (1 HSPs)
scaffold0643 (225-286)||(355-416)
[»] scaffold0396 (1 HSPs)
scaffold0396 (227-288)||(11032-11092)
[»] scaffold0228 (3 HSPs)
scaffold0228 (225-289)||(6318-6382)
scaffold0228 (225-289)||(13900-13964)
scaffold0228 (225-289)||(23852-23916)
[»] scaffold1867 (1 HSPs)
scaffold1867 (253-289)||(1005-1041)
[»] scaffold0740 (1 HSPs)
scaffold0740 (253-289)||(5144-5180)
[»] scaffold0483 (1 HSPs)
scaffold0483 (227-287)||(7482-7542)
[»] scaffold0338 (1 HSPs)
scaffold0338 (261-289)||(9850-9878)
[»] scaffold0186 (1 HSPs)
scaffold0186 (229-288)||(19838-19897)
[»] scaffold0184 (1 HSPs)
scaffold0184 (253-289)||(30646-30682)
[»] scaffold0148 (1 HSPs)
scaffold0148 (226-285)||(38379-38435)
[»] scaffold0117 (1 HSPs)
scaffold0117 (261-289)||(10925-10953)
[»] scaffold0078 (1 HSPs)
scaffold0078 (253-289)||(42162-42198)
[»] scaffold0063 (1 HSPs)
scaffold0063 (241-289)||(43514-43562)
[»] scaffold0035 (2 HSPs)
scaffold0035 (261-289)||(108821-108849)
scaffold0035 (261-289)||(117322-117350)
[»] scaffold0021 (2 HSPs)
scaffold0021 (214-286)||(16767-16839)
scaffold0021 (214-286)||(26298-26370)
[»] scaffold0016 (1 HSPs)
scaffold0016 (253-289)||(165073-165109)


Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 293
Target Start/End: Complemental strand, 33173285 - 33173011
Alignment:
Q  17 actttgtagacaaaattcatcacctcacagcattgttgtttcgtctaactcaacttgaagagcactgcatgcaggtgaagaggagagagatgaagaagaa 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33173285 actttgtagacaaaattcatcacctcacaacattgttgtttcgtctaactcaacttgaagagcactgcatgcatgtgaagaggagagagatgaagaagaa 33173186  T
Q  117 taggtaaaagataaggtttcttcaaaaattagtgatagtcgcaaggaaataagaagatggaaagaaaataaattgaagaagatgaaggagatggtttttg 216  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33173185 taggtaaaagataaggtttcttcaaaaattagtgatagacgcaagacaataagaagatggaaagaaaataaattgaagaagatgaaggagatggtttttg 33173086  T
Q  217 taacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatat 293  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33173085 taacaa-ccgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgt-tgtgattatatat 33173011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 33610358 - 33610433
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33610358 ttgtaacaactcgattttcgctagatttatttttaattgttttaatatgtgtttatatatgcttgtgtgtgattat 33610433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 18040927 - 18040987
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18040927 cgattttcgctagaattatttttaattgttttaatatgtatttatatgtgcttgtgtgtga 18040987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 31590866 - 31590807
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31590866 gattttcgctagaattatttttaattgttttaatatgtgtttatatgtacttgtgtgtga 31590807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 37651813 - 37651887
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  37651813 ttgtaacagttcgattttcgttagatttatttt-aattgttttattatgtgtttatttgtgcttgtgtgtgattat 37651887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 23159096 - 23159030
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgt 281  Q
    ||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23159096 tgtaacaacccgattttcgttagatttatttttaattgttttattatgtgtttatatgtgcttgtgt 23159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 26012342 - 26012280
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  26012342 gattttcgttagatttatttttaattgttttattatgtgtttatttgtgcttgtgtgtgatta 26012280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 23223338 - 23223399
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23223338 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttttgtgtgatta 23223399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 29307349 - 29307284
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  29307349 cgattttcgttagatttattttttaattgttttaatatttgtttatatgtgcttgtgtgtgattat 29307284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 23351080 - 23351016
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  23351080 cgattttcgctagatttatttttaattgttttaatatgtggttataagtgcttgtgtgtgattat 23351016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24908662 - 24908598
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  24908662 cgattttcgttagatttatttttaattattttaatatgtgtttatatgtccttatgtgtgattat 24908598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24910883 - 24910819
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  24910883 cgattttcgttagatttatttttaattattttaatatgtgtttatatgtccttatgtgtgattat 24910819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 22735204 - 22735266
Alignment:
Q  224 tcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  22735204 tcgattttcgttagatttatttttaattgttttattatgtgtttatatgtgcttatgtatgat 22735266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 23218741 - 23218668
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  23218741 tgtaacaacccgattttcgctaga-ttatttttaattgttttaatatgtgtttatatgtgctcgtgtgtaattat 23218668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 45464501 - 45464559
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  45464501 attttcgctagatttatttttaattgttttaatatgtgtttatatgtacttgtgtgtga 45464559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 19330723 - 19330787
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  19330723 cgattttctttagatttagttttaattgttttaatatgtgtttctatgtgcttgtgcgtgattat 19330787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 22724001 - 22723937
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  22724001 cgattttcgctagacttatttttaattattttaatatgtgtttgtatgtgcttgtgcgtgattat 22723937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24240466 - 24240403
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24240466 cgattttcgctagatttatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 24240403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 24278635 - 24278710
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttt-taattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||| |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  24278635 tgtaacaacccgattatcgttagatttattttttaattgttttattatgtgtttatttgtgcttgtgtgtgattat 24278710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 25297070 - 25297005
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  25297070 cgattttcgctagatttattttttaattgttttattatgtgtttatatgtgtttgtgtgtgattat 25297005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 25759090 - 25759025
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  25759090 cgattttcgctagatttattttttaattgttttattatgtgtttatatgtgtttgtgtgtgattat 25759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 41506245 - 41506305
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||||||||||||||||| |||   ||||||||||| ||||||||||||||||||    
T  41506245 cgattttcgttagaattatttttaattattt---tatgtgtttatttgtgcttgtgtgtgatta 41506305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 45558315 - 45558377
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  45558315 cgattttcgctataattatttttaattgttttaata--tgtttctatgtgcttgtgtgtgattat 45558377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 33529336 - 33529272
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| || | |||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  33529336 cgattttcgctatatttatttataattgttttaatatgtgtttatatgtgtttgtgtgtggttat 33529272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 5855463 - 5855400
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| | |||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  5855463 cgatttttgctagatttatttttaattgttttattatgtgtttatttgtgcttgtgtttgatta 5855400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 24968658 - 24968732
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  |||||||||| |||| ||||||| ||||||||||||||||||||||||||  |||||||| |||||    
T  24968658 ttgtaacagctcgattttcgctagatttatttt-aattgttttaatatgtgtttatatgttgttgtgtgttattat 24968732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 17503036 - 17502975
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  17503036 attttcgctagatttatttttaattgttt-aatatgtgtttttatgtgcttttgtgtgattat 17502975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 22888653 - 22888584
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||  ||||||| |||||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  22888653 tgtaacaacccgatttttgttagatttatctt-aattgttttaatatgtgtttttatgtgcttgtgtgtga 22888584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 23150709 - 23150647
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  23150709 cgattttggttagatttattttttaattgttttattatgtgtttatatgtgcttgtgtatgat 23150647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 39446084 - 39446145
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttata--tgtgcttgtgtgtgat 286  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  39446084 attttcgctagatttatttttaattgttttattatgtgtttatatgtgtgcttgtgtgtgat 39446145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 17286082 - 17286020
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||    
T  17286082 cgatttccgttagaattatttttaattattttatt--gtgtttatttgtgcttgtgtgtgattat 17286020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 22496605 - 22496657
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgttt 267  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||| ||||||    
T  22496605 tgtaacagtccgattttcgctagaattatttttaattgttttaatacgtgttt 22496657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 22745583 - 22745520
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||| |||||||    
T  22745583 cgattttcgctagatttatttttaattgttttattatgtgtct-tatgtgcttgtgtctgattat 22745520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 23151153 - 23151227
Alignment:
Q  213 tttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||  ||||||||| |||| ||||||| |||||||||| |||| |||||||||| |||||||||||||||    
T  23151153 tttgtaacaacccgattttcgctagatttatttt-aattgtttta-tatgagtttatatgtacttgtgtgtgattat 23151227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 31193683 - 31193727
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  31193683 ttttaattgttttattatgtgattatatgtgcttgtgtgtgatta 31193727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 38534591 - 38534519
Alignment:
Q  215 tgtaacaattcgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | ||||||| | |||| |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  38534591 tgtaacagtccgatttttgctagatttattttttaattgttttattatgtgtttatatgtgtttgtgtgtgat 38534519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 15934102 - 15934039
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| |||||||||||| ||||| ||||||||| ||||| ||| ||||||||||    
T  15934102 cgattttcgctagatttatttttaattattttattatgtgtttttatgtacttttgtgtgatta 15934039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 21258854 - 21258916
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaat-atgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||  ||| ||||||||||||||||| || ||||||| |||||||||||||||||||    
T  21258854 cgattttcgcaagatttatttttaattgtttttattatgtgttcatatgtgcttgtgtgtgat 21258916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 24551968 - 24552022
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtg 282  Q
    ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||    
T  24551968 cgattttcgctaga-ttatttttaattgttttaat--gtgtttatatgtgcttgtgtg 24552022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 22221701 - 22221737
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22221701 ttttattatgtgtttatatgtgcttgtgtgtgattat 22221737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 22228043 - 22228079
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22228043 ttttattatgtgtttatatgtgcttgtgtgtgattat 22228079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 22982209 - 22982137
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||  |||||||||||| | ||||||| | |  ||||| | ||||||||||||||||||||||||||    
T  22982209 ttgtaacaacccgattttcgttatatttattttaattacttttattgtgtgtttatatgtgcttgtgtgtgat 22982137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 23157639 - 23157701
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| |||||||||| |||| |||||||||| |||||||||||||||    
T  23157639 cgattttcgctagatttatttt-aattgtttta-tatgagtttatatgtacttgtgtgtgattat 23157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 27232445 - 27232491
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtg 282  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  27232445 tagatttatttttaattgttt-aatatgtgtttttatgtgcttgtgtg 27232491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 26696023 - 26696084
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaat-atgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| ||||||| ||||||||| || |||||||||||||| ||||||||||||    
T  26696023 cgattttcgctagatttatttt-aattgtttttattatgtgtttatatgtacttgtgtgtgat 26696084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24625700 - 24625636
Alignment:
Q  225 cgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| | || ||| | |||||||||||||||||||||| |||||||||    
T  24625700 cgattttcgctagaattatttt-atttatttattatatgtgtttatatgtgcttgtatgtgattat 24625636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 25710443 - 25710487
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| |||||||| ||| |||||| ||||||||||    
T  25710443 ttttaattgttttattatgtgttaatacgtgcttatgtgtgatta 25710487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 289
Target Start/End: Original strand, 33537686 - 33537770
Alignment:
Q  205 agatggtttttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| || |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33537686 agatgtttattgtaacagttcgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 33537770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 22461477 - 22461552
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22461477 ttgtaacaacccgattttcgctagaattatttttaatcgttttaatatgtgtttatatgtgcttgtgtgtgattat 22461552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 17082518 - 17082582
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17082518 cgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 17082582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 18506716 - 18506790
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18506716 tgtaacaacccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgcgtgattat 18506790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 23223633 - 23223571
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23223633 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgtttgggtgtgattat 23223571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 116445 - 116510
Alignment:
Q  224 tcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  116445 tcgattttcgctagaattatttttaattgttttaatacgtgtttatacgtgcttgtgtgtgattat 116510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 25655042 - 25654978
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25655042 cgatttttgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 25654978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 21932090 - 21932027
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21932090 cgatttttgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 21932027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 15004293 - 15004347
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15004293 tagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 15004347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 15889097 - 15889171
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||    
T  15889097 tgtaacaacccgattttcgttagaattatttttaattgttttaatatgtgtgtatatatgctcgtgtgtaattat 15889171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 17547050 - 17547112
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17547050 attttcgctagatttatttttaattgttttaatatgtgcttatatgtgcttgtgtgtgattat 17547112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 22848917 - 22848859
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22848917 attttcgttagatttatttttaattgttttaatatgtgtttatatgtgcttgtgggtga 22848859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 32352879 - 32352819
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  32352879 cgattttcgctatatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 32352819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 18628944 - 18628990
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18628944 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 18628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 15079086 - 15079147
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  15079086 cgattttcgctagatttatttttaattgttttattatgtggttatatgtgcttgtgtgtgat 15079147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 35135352 - 35135413
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||| ||||    
T  35135352 cgattttcgttagatttatttttatttgttttattatgtgtttatatgtgcttatgtatgat 35135413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 22582138 - 22582202
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  22582138 cgattttcgctagatttattcttaattcttttaatatgtgtttttatgtgcttgtatgtgattat 22582202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 22584928 - 22584992
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  22584928 cgattttcgctagatttattcttaattcttttaatatgtgtttttatgtgcttgtatgtgattat 22584992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 22589759 - 22589823
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  22589759 cgattttcgctagatttattcttaattcttttaatatgtgtttttatgtgcttgtatgtgattat 22589823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 25920486 - 25920424
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||||||  ||| |||||| ||| |||||||||||||||||||||    
T  25920486 gattttcgttagaattatttttaattagttt-atatgtatttttatgtgcttgtgtgtgattat 25920424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 33325610 - 33325539
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  ||||||||| |||| ||||||||| |||||||| ||||||||||||||||||| ||| ||||    
T  33325610 tgtaacaacccgattttcgctagatttatttttatttgttttattatgtgtttatatgtgcttatgtatgat 33325539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 29157848 - 29157890
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgttt 267  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  29157848 cgattttcgctagaattatttttaattgttttaatatgtgttt 29157890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 14153158 - 14153098
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||    
T  14153158 ttttcgttagatttatttttaattgttt-aataagtgtttttatatgcttgtgtgtgattat 14153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 29606302 - 29606226
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||  || ||||||||||| |||||||| ||||| |||||||||||||| ||| || ||||||||||||||    
T  29606302 ttgtaacaacccgtttttcgttagatttattttttaattgctttaatatgtgtttttatatgtttgtgtgtgattat 29606226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 14672343 - 14672269
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||  |||||||||||||| ||||||| | |  |||| |||||| ||||||||||||||| ||||||||    
T  14672343 ttgtaacaacccgattttcgttagatttattttaattaatttttatatgtatttatatgtgcttgtatgtgatta 14672269  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 22578507 - 22578446
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| |||||||||||| |||| || ||||||||| ||||||| |||||||||||    
T  22578507 attttcgttagatttatttttaattatttttat-tgtgtttatttgtgcttatgtgtgattat 22578446  T

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Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 34967729 - 34967675
Alignment:
Q  210 gtttttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtg 264  Q
    ||||||||||||   ||||||||| |||||||||||| |||||||||||||||||    
T  34967729 gtttttgtaacaggccgattttcgctagaattattttcaattgttttaatatgtg 34967675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 13014030 - 13014106
Alignment:
Q  214 ttgtaacaattcgattttc-gttagaattatttttaattgttttaat-atgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||  |||||| ||||||| |||| ||||||| ||||||||||||||| ||||||||||||||    
T  13014030 ttgtaacaactcgatttttagttagatttatttt-aattattttaattatgtgtttatatgtgtttgtgtgtgattat 13014106  T

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Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 19854970 - 19854929
Alignment:
Q  248 aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  19854970 aattattttaatatgtgtttatatgtgtttgtgtgtgattat 19854929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 14129001 - 14128950
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    |||| |||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  14129001 tagatttatttttaattgttt-aatatgtgtttctatatgcttgtgtgtgatt 14128950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 19171434 - 19171394
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgttt 267  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  19171434 attttcgctagatttatttttaattgttttaatatgtgttt 19171394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 31466925 - 31466976
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgttt 267  Q
    ||||||| | |||||||||||||| ||||||||||||| ||||||||||||||    
T  31466925 tgtaacagtccgattttcgttagatttatttttaattg-tttaatatgtgttt 31466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 14355874 - 14355801
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    ||||||||  |||||||||| || ||||||||| |||| ||| | || |||||||||||||||||||||||||||    
T  14355874 ttgtaacagctcgattttcgctaaaattatttt-aattatttattatgtgtgtttatatgtgcttgtgtgtgatt 14355801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 16596880 - 16596925
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||| ||||||||| || ||||||||    
T  16596880 ttttacttgttttaatatgtgtttttatgtgcttctgcgtgattat 16596925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 21410391 - 21410452
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  |||| |||||||||||| ||||| ||||||||||| ||||||| ||| ||||    
T  21410391 cgattttcaatagatttatttttaattcttttattatgtgtttatttgtgcttatgtatgat 21410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 27752340 - 27752281
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||||  ||| ||||||| |||||||||||||  |||||||||    
T  27752340 ttttcgttagaattatttttaatt-atttcatatgtg-ttatatgtgcttgcatgtgattat 27752281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 18027865 - 18027893
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  18027865 tgtgtttatatgtgcttgtgtgtgattat 18027893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 21265786 - 21265738
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgt 273  Q
    ||||||||| |||| |||||||||||||||||| | ||||||| |||||    
T  21265786 cgattttcgctagagttatttttaattgttttattgtgtgtttttatgt 21265738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 10375397 - 10375327
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10375397 tgtaacaacccgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 10375327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 47467706 - 47467780
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47467706 tgtaacaacccgattttcgctagaattatttttaattgttttaatatgtgtttttatgtgcttgtgtgtgattat 47467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13589463 - 13589527
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13589463 cgattttcgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgttattat 13589527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 7185206 - 7185269
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7185206 gattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 7185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 15212954 - 15213017
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15212954 cgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 15213017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 41916127 - 41916198
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41916127 ttgtaacagtccgatttttgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 41916198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 14902149 - 14902061
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttt--taattgttttaatatgtgtttatatgtgcttgtgtgtgattatatattcttgga 300  Q
    ||||||||  |||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  14902149 ttgtaacagctcgattttcgctagatttattttattaattgttttaatatgtgtttatatgtgcttgtgtgtgattatttattattgga 14902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 40904301 - 40904364
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40904301 cgattttcgatagaattatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 40904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 49072570 - 49072506
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  49072570 cgattttcgctagatttatttttaattgttttaatatgtgtttatatctgcttgtgcgtgattat 49072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 30231832 - 30231903
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | ||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30231832 tgtaacagtccgattttcactagatttatttttaattgttttattatgtgtttatatgtgcttgtgtgtgat 30231903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13438402 - 13438465
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  13438402 cgattttcgctagaattatttt-aattgttttaatatgtgtttttaagtgcttgtgtgtgattat 13438465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 31635380 - 31635444
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  31635380 cgatttttgttagaattatttttaattattttattgtgtgtttatttgtgcttgtgtgtgattat 31635444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 50219339 - 50219398
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  50219339 cgattttcgctagaattatttt-aattgttttaatacgtgtttatatgtgcttgtgtgtga 50219398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 37956376 - 37956427
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  37956376 tagatttatttttaattgttttaatacgtgtttatatgtgcttgtgtgtgat 37956427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 27961881 - 27961820
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27961881 cgatttttgctagatttatttttaattgttttattatgtgtttatatgtgcttgtgtatgat 27961820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 19560240 - 19560177
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  19560240 cgattttcgctaga-ttatttttaattgttttaatatgtatttatatgtgctcgtgtgtaattat 19560177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 10236665 - 10236726
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| ||||||| |||||||||||||||||||||| | ||||| |||||||||||    
T  10236665 attttcgttagatttatttt-aattgttttaatatgtgtttatttatgcttatgtgtgattat 10236726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 12132996 - 12133038
Alignment:
Q  247 taattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  12132996 taattattttaatatgtgtttatatgtgcttgtgtgtgattat 12133038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 18235610 - 18235652
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  18235610 tttttaattgttttaatacgtgtttatatgtgcttgtgtgtga 18235652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 18493453 - 18493515
Alignment:
Q  225 cgattttcgttagaattatttttaattg-ttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| ||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  18493453 cgattttcgctagatttatttttaattacttttattatgtgtttatatgtgcttgtgtgtgat 18493515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 36990340 - 36990279
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||| |||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  36990340 gattttcgctagaataatttt-aattgttttaatatgtatttttatgtgcttgtgtgtgatta 36990279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 15012632 - 15012694
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||||||||||| ||||  ||||| ||||||||||| |||||||||    
T  15012632 cgattttcgttagatttatttttaattgtttaaata--tgtttttatgtgcttgtatgtgattat 15012694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 54399240 - 54399177
Alignment:
Q  225 cgattttcgttagaattattttt---aattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||||||||||||   ||||||||||| |||||||| |||||||||||||||||    
T  54399240 cgattttcgctagaattattttttttaattgttttaacatgtgtttttatgtgcttgtgtgtga 54399177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 13808852 - 13808911
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  13808852 gattttcgatacaatt-tttttaattgttttattatgtgtatatatgtgcttgtgtgtgat 13808911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 15045736 - 15045676
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||| |||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  15045736 cgattttcgatagatttatttttaattattttattatatgtttatttgtgcttgtgtgtga 15045676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 15108688 - 15108748
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||| |||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  15108688 cgattttcgatagatttatttttaattattttattatatgtttatttgtgcttgtgtgtga 15108748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 19821124 - 19821183
Alignment:
Q  229 tttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||| || |||||||||    
T  19821124 tttcgttagaattatttttaattatttt-atacgtgtttatatgtgctggtatgtgattat 19821183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 41255715 - 41255778
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||||||||||| ||||||||||| |||||||| |  |||||||||    
T  41255715 cgattttcgttagatttatttttaattgtttaaatatgtgttt-tatgtgctcgcatgtgattat 41255778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 18277286 - 18277223
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| | |||| |||||||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  18277286 cgatttttgctagatttatttttaattgttttattatgtgtttatttgtacttgtatgtgatta 18277223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 12244253 - 12244311
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||||||| |||||||||||| |||||   ||||||||| |||||||||||||||    
T  12244253 cgattttcgttagatttatttttaattatttta--ttgtgtttatttgtgcttgtgtgtga 12244311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 13722420 - 13722481
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||| |||||||   |  ||||| |||||||||||||||||||||||||||||||    
T  13722420 ttttcgttagatttattttacttacttttattatgtgtttatatgtgcttgtgtgtgattat 13722481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 13247312 - 13247276
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13247312 ttttattatgtgtttatatgtgcttgtgtgtgattat 13247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 15712253 - 15712191
Alignment:
Q  228 ttttcgttagaattatttt--taattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||||||||  | |||  |||| |||||||||||| |||||||||||||||||    
T  15712253 ttttcgttagaattattttatttatttatttattatgtgtttataagtgcttgtgtgtgatta 15712191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 54362622 - 54362683
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| |||| |||||||||||| ||||||||  |||| |||||||||| | ||||||||    
T  54362622 attttcgctagatttatttttaattattttaatacatgttgatatgtgcttttatgtgatta 54362683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 10103644 - 10103688
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  10103644 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 10103688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 15674483 - 15674527
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  15674483 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 15674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 31133183 - 31133139
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  31133183 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 31133139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 33241569 - 33241525
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  33241569 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 33241525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 53704102 - 53704138
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  53704102 ttttattatgtgtttatatgtgtttgtgtgtgattat 53704138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 23233905 - 23233977
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatattcttgga 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  23233905 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgaatatttattattgga 23233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6457517 - 6457444
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6457517 tgtaacaacccgattttcgttagaattatttttaattgttttaatatgtgttt-tatgtgcttgtgtgtgattat 6457444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 11966196 - 11966126
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11966196 tgtaacagtccgattttcactagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 11966126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 5621150 - 5621218
Alignment:
Q  217 taacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  5621150 taacaatttgatttttgttagatttatttttaattgttttaatatgtgtttatatgtgcttctgtgtga 5621218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 3674804 - 3674733
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3674804 tgtaacagtccgattttcgctagatttatttttaattgttttattatgtgtttatatgtgcttgtgtgtgat 3674733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 23467363 - 23467302
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23467363 cgattttcgttagatttatttttaattgttttattatgtgtttatatgtgcttgtgtatgat 23467302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 21215810 - 21215870
Alignment:
Q  229 tttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21215810 tttcgctagatttatttttaattgttttaatatgtgtttttatgtgcttgtgtgtgattat 21215870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 23418151 - 23418087
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23418151 cgatttttgctaaaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtggttat 23418087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 37984275 - 37984211
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37984275 cgattttcgctagatttatttttaattgtttaaatatgtgtttatatgtgcttatgtgtgattat 37984211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 16834691 - 16834753
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16834691 gattttcgctagaaatatttttaattgttttaatatgtg-ttatatgtgcttgtgtgtgattat 16834753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 19874611 - 19874549
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  19874611 attttcgctggaattatttttaattattttaatatgtgtttatatgtgtttgtgtgtgattat 19874549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 21222006 - 21222070
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  21222006 cgatttttgttagaattatttttaattattttattgtgtgtttatttgtgcttgtgtgtgattat 21222070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 19349953 - 19349882
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||  |||||||||| |||| ||||||| |||||||||| |||| |||||||||||||||||||||||    
T  19349953 tgtaacagctcgattttcgctagatttattttgaattgttttattatgagtttatatgtgcttgtgtgtgat 19349882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 26559179 - 26559253
Alignment:
Q  213 tttgtaacaattcgattttcgttagaattatttttaattgtttta--atatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |  |||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  26559179 tttgtaacagtctgattttcgctagatttatttttaattgttttaatatatgtgtttatatgtgcttgtgtgtga 26559253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 11762868 - 11762929
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11762868 attttcgctagatttatttt-aattgttttaatatgtgtttctatgtgcttgtgtgtgattat 11762929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22662045 - 22662091
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  22662045 tttttaattgttttattatgtgtttatatgtgcttgtgtgtgattat 22662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 32965057 - 32965118
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  32965057 cgatttttgttagatttatttttaattgttttaataagtgtttatatgtgtttgtgtatgat 32965118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 433361 - 433298
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  433361 cgattttcgctagatttatttttaattgttttattacgtg-ttatatgtgcttgtgtgtgattat 433298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 5450157 - 5450220
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||||| |||| || |||||||||| |||||||||||||||||||||||||||||||    
T  5450157 cgatttttgttagatttatctt-aattgttttattatgtgtttatatgtgcttgtgtgtgattat 5450220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 21110627 - 21110568
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  21110627 cgattttcgctagatttatttttaattgttttattatgtgtttatatgt-cttgtgtgtga 21110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 24224743 - 24224807
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| ||||||||||||| |||| ||||| | ||||||||| |||||||||||||||||||    
T  24224743 cgattttcattagaattattttcaattattttattgtgtgtttatttgtgcttgtgtgtgattat 24224807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 16596411 - 16596340
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | ||||||| | |||| |||||||||| |||||||||| ||||||||||||| |||||||||||    
T  16596411 tgtaacagtccgatttttgctagatttatttttaactgttttaatacgtgtttatatgtgtttgtgtgtgat 16596340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 22886468 - 22886408
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  22886468 attttcgttagatttatttttaatggttttaatatgtgttt-tatgtgcttgtttgtaatta 22886408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 3420368 - 3420428
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||  || ||||||||||    
T  3420368 cgattttcactagatttatttttaattgttttaatatgtgtttatacatgtttgtgtgtga 3420428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24084743 - 24084680
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| |||| ||||| |||||||||||||||||||||| ||||||||    
T  24084743 cgattttcgctagatttatttt-aattattttattatgtgtttatatgtgcttgtgcgtgattat 24084680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 7729349 - 7729291
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| |||| |||||||||||| ||||| | ||||||||| |||||||||||||||    
T  7729349 attttcgctagatttatttttaattattttattgtgtgtttatttgtgcttgtgtgtga 7729291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 2032706 - 2032644
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||  |||||||||    
T  2032706 cgatttttgttagaattatttttaattatttt-atatgtg-ttatatgtgcttgcatgtgattat 2032644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 28262347 - 28262312
Alignment:
Q  254 tttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| |||||||||||||||||||||||||||||||    
T  28262347 tttattatgtgtttatatgtgcttgtgtgtgattat 28262312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 1167582 - 1167618
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  1167582 ttttattatgtgtttatatgtgtttgtgtgtgattat 1167618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 67343 - 67418
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67343 ttgtaacagtccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 67418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 132715 - 132652
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  132715 cgatttttgctagaattatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 45146253 - 45146178
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45146253 ttgtaatagttcgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 45146178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 9723196 - 9723260
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9723196 cgattttcgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgttattat 9723260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 21675119 - 21675181
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21675119 attttcgctagaattatttttaattgttttaatgtgtgtttatatgtgcttgtgtgtgattat 21675181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 14268242 - 14268307
Alignment:
Q  225 cgattttcgttagaattatttt-taattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14268242 cgattttcgttagatttattttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 14268307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 9251317 - 9251253
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  9251317 cgattttcgctagaattatttttaattgttttaatatatgtttttatgtgcttgtgtgtgattat 9251253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 33560525 - 33560465
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33560525 cgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 33560465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 9318932 - 9318996
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  9318932 cgattttagctagaattatttttaattgttttaatatatgtttttatgtgcttgtgtgtgattat 9318996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 9612219 - 9612155
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  9612219 cgattttcgttagatttatttttaattgctttattatgtgtttatttgtgcttgtgtgtgattat 9612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 9839790 - 9839726
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  9839790 cgattttcgttagatttatttttaattgctttattatgtgtttatttgtgcttgtgtgtgattat 9839726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 20582950 - 20583014
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20582950 cgatattcgctagatttatttttaattgttttaatatgtgtttttatgtgcttgtgtgtgattat 20583014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 31502084 - 31502013
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    ||||||||  ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  31502084 tgtaacaacccgattttcgctagatttatttttaattgttttaatatgtgttt-tatgtgcttgtgtgtgatt 31502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 45150441 - 45150378
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  45150441 cgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgtttgtgcgtgatta 45150378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 13448183 - 13448256
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  ||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  13448183 tgtaacaacccgattttcgtttggattatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 13448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 34240545 - 34240606
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34240545 attttcgttagttttatttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 34240606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 46474834 - 46474764
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| || |||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  46474834 tgtaacactttgattttcgctataattatttttagttgttttaacatgtgtttatatgtgcttgtgtgtga 46474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 39285560 - 39285632
Alignment:
Q  216 gtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| | ||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39285560 gtaacagtccgattttcgctggaaatatttttaattgttttaatatgtg-ttatatgtgcttgtgtgtgattat 39285632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 13352836 - 13352772
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  13352836 cgatttttgctagatttatttttaattgttttaatatttgtttatatgtgcttgtgcgtgattat 13352772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 13275694 - 13275623
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||  |||||||||| |||| ||||||||||||||||   ||||||||||||||||||||||||||||    
T  13275694 tgtaacagctcgattttcgctagatttatttttaattgtttatttatgtgtttatatgtgcttgtgtgtgat 13275623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 28392591 - 28392518
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | ||||||||| |||||||||||  |||||||||||||||| ||| |||||||||||||||||||||    
T  28392591 tgtaacagtccgattttcgctagaattatttc-aattgttttaatatgtatttttatgtgcttgtgtgtgattat 28392518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 16914313 - 16914386
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||  ||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||  |||||||    
T  16914313 tgtaacaaaccgattttcgctagatttatttttaattgttttattatgtgtttatttgtgcttgtacgtgatta 16914386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 48357493 - 48357433
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||| |||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  48357493 ttttcgctagatttatttttaatcgttttattatgtgtttatttgtgcttgtgtgtgatta 48357433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 49047033 - 49047076
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  49047033 tttttaattgttttattatgtgtttatatgtgcttgtgtgtgat 49047076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 6321787 - 6321725
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||| |||||||| ||| ||||| ||||| ||| ||||||||||||||||||||    
T  6321787 gattttcgttagatttatttttgattattttattatgtatttttatgtgcttgtgtgtgatta 6321725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 38424994 - 38424930
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  38424994 cgattttcgttagatttattttttaattgttttaatatgtgctt-tatgtgcttgtctgtgattat 38424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 14936031 - 14935969
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  14936031 cgattttcgctagatttatttt-aattgttttaatatgtgttt-tatgtgtttgtgtgtgattat 14935969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 15363624 - 15363562
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  15363624 cgattttcgctagatttatttt-aattgttttaatatgtgttt-tatgtgtttgtgtgtgattat 15363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18078877 - 18078933
Alignment:
Q  213 tttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttat 269  Q
    |||||||||  |||||||||| |||||||||||||||||||||| || |||||||||    
T  18078877 tttgtaacagctcgattttcgctagaattatttttaattgtttttatgtgtgtttat 18078933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 28722960 - 28722896
Alignment:
Q  226 gattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||||| |||||||| |||||||||| ||||||||| |||||| ||||||||||||||    
T  28722960 gatttttgttagatttattttttaattgttttattatgtgtttttatgtgtttgtgtgtgattat 28722896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 16920415 - 16920352
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||  |||||||||||||| ||||| | ||||||||| ||||||| ||||||||||    
T  16920415 cgattttcgtttaaattatttttaattattttattgtgtgtttatttgtgcttatgtgtgatta 16920352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 12759880 - 12759844
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  12759880 ttttattatgtgtttatatgtgcttgtgtgtgattat 12759844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 45451525 - 45451561
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45451525 ttttattatgtgtttatatgtgcttgtgtgtgattat 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 13378380 - 13378317
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| ||||||| | |  ||||| | ||||||||| ||||||||||||||||||    
T  13378380 cgattttcgttagatttattttaattatttttattgtgtgtttatttgtgcttgtgtgtgatta 13378317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 13390245 - 13390170
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaatt-gttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  |||||||| ||||||||||||||||||  ||||| | |||||||||   |||||||||||||||||    
T  13390245 tgtaacaacccgattttctttagaattatttttaattatttttattgtgtgtttattcatgcttgtgtgtgattat 13390170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 17923365 - 17923302
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| ||| |||||||||||||||| ||||||||| | |||| || ||||||||    
T  17923365 cgattttcgctagatttaattttaattgttttaatgtgtgtttatttatgctcgtatgtgatta 17923302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 10331898 - 10331958
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||| |||||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||    
T  10331898 gattttcgctagaattatttt-aatggttttaatatgtgttt-tatgtgcttgtttgtaatta 10331958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 17984176 - 17984249
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  |||||||||||| | ||||||| ||||||||| |||||||||||| | | ||||| |||||||||    
T  17984176 tgtaacaacccgattttcgttaaatttatttt-aattgtttttatatgtgtttatttatacttgtatgtgattat 17984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 17223390 - 17223446
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgt 283  Q
    |||||| |||||||||||||| |||| ||||| | ||||||||| |||||||||||||    
T  17223390 gatttttgttagaattatttt-aattattttattgtgtgtttatttgtgcttgtgtgt 17223446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 295363 - 295407
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  295363 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 295407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 11580132 - 11580168
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  11580132 ttttattatgtgtttatatatgcttgtgtgtgattat 11580168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 36025011 - 36024967
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  36025011 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 36024967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 38375062 - 38375125
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38375062 gattttcgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 38375125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 17758062 - 17758126
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17758062 cgatttttgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 17758126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 19059382 - 19059446
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19059382 cgatttttgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 19059446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 39657462 - 39657391
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39657462 tgtaacaacccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 39657391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 17586273 - 17586346
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatattcttgg 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  17586273 cgattttcgctagaattatttttaattgttttaatatgtgttt-tatgtgcttgtgtgtgattatttattgttgg 17586346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 31411022 - 31411092
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31411022 tgtaacaatcagatttttgctagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 31411092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 33368317 - 33368390
Alignment:
Q  216 gtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  33368317 gtaacaacccgattttcgttagatttatttttaattgttttattatgtgtttatttgtgcttgtgtgtgattat 33368390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 21166437 - 21166505
Alignment:
Q  217 taacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21166437 taacaatttgatttttgttagatttatttttaattgttttaatatgtgtttatatgtgcttctgtgtga 21166505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 38810315 - 38810390
Alignment:
Q  211 tttttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||   |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  38810315 tttttgtaacagcccgattttcgttagatttatttttaattgttttattatgtgtttatatatgcttgtgtgtgat 38810390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 43426906 - 43426969
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  43426906 cgattttcgctagaattatttttaattgttt-aatatgtgtttatatgtgcttgcgtgtgattat 43426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 13300789 - 13300852
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13300789 gatttttgctagatttatttttaattgttttaatatgtgtttacatgtgcttgtgtgtgattat 13300852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 9150204 - 9150158
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9150204 tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 9150158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 13311454 - 13311508
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13311454 tagatttatttttaattgttttaatatgtgtttacatgtgcttgtgtgtgattat 13311508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25103346 - 25103419
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | ||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  25103346 tgtaacagtccgattttcgctagatttatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 25103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 34560717 - 34560644
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||  ||||||| |||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  34560717 tgtaacaacccgatttttgttagatttatttttaattgttttattatgtgtttttatgtgcttgagtgtgatta 34560644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 40940054 - 40939993
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  40940054 cgattttcactagatttatttttaattgttttattatgtgtttatatgtgcttgtgtgtgat 40939993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 8605724 - 8605662
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  8605724 gattttcgctagatttatttt-aattgttttaatatgtgtttttatgtgcttgtgtgtgattat 8605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 10913754 - 10913703
Alignment:
Q  238 aattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  10913754 aattatttttaattgttttaatatgtgtttacatatgcttgtgtgtgattat 10913703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 8632695 - 8632622
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||  |||||||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  8632695 ttgtaacaacccgattttcgttagatttatttt-aattgtttttatatgtgtttatttgtacttgtgtgtgatta 8632622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11514863 - 11514936
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  11514863 tgtaacagtccgattttcattaga-ttatttttaattgttttaatatatatttatatgtgtttgtgtgtgattat 11514936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 14081404 - 14081343
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  14081404 cgattttcgctagatttatttttaattgttttattatgtgtttatatgtgcttatgtatgat 14081343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 17192417 - 17192356
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||||||||||||||| ||||| | ||||||||| |||| |||||||||||||    
T  17192417 attttcgttagaattatttttaattattttattgtgtgtttatttgtggttgtgtgtgatta 17192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 18970797 - 18970733
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  18970797 cgattttcgctagatttattttttaattgttttaatatgtgttt-tatgtgcttgtgtgtgattat 18970733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 50111409 - 50111454
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  50111409 ttttaattgttttattatgtgtttatatgtgcttgtgtgtgattat 50111454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 12032392 - 12032329
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||||||||||||||||| ||||| | ||||||| | ||| ||||||||||||||    
T  12032392 cgattttcgttagaattatttttaattattttattgtgtgtttttttgttcttgtgtgtgatta 12032329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 12530848 - 12530914
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatatt 294  Q
    ||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||    
T  12530848 atttttgttagatttatttt-aactgttttaatatatgtttatatgtgcttgtgtgtgattatttatt 12530914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 14058549 - 14058620
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  ||||||||| | ||||||||||||||||| | | ||||||||| ||||||||||||||||||    
T  14058549 tgtaacaacccgattttcgctggaattatttttaattgtgtcattatgtgtttttatgtgcttgtgtgtgat 14058620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 15521871 - 15521808
Alignment:
Q  226 gattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||| |||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  15521871 gattttcgctagatttattttttaattgttttaatatgcgtttatttgtgcttgtgtgtgatta 15521808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 17205552 - 17205489
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||||||| ||||||||| ||||| | | ||||||| ||||||||||||||||||    
T  17205552 cgattttcgttagaattgtttttaattattttattgtatgtttatttgtgcttgtgtgtgatta 17205489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 12487116 - 12487178
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaat-atgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | |||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  12487116 cgatttttgctagatttatttttaattgtttttattatgtgtttatatgtgcttgtgtgtgat 12487178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 17140403 - 17140357
Alignment:
Q  240 ttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  17140403 ttatttttaattgttttattatgtgtttatatttgcttgtgtgtgat 17140357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 9590096 - 9590141
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  9590096 ttttaattattttaatatgtgtttacatgtgcttgtgtgtgattat 9590141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 11060326 - 11060387
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  11060326 cgattttcactagatttatttttaattgttttattatgtgtttatatgtgcttatgtatgat 11060387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 20421733 - 20421660
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||||||||||||| ||||||| | |  |||| ||||||||||||||||||||||  |||||||    
T  20421733 tgtaacaatccgattttcgttagatttattttaattaatttttatatgtgtttatatgtgcttgtacgtgatta 20421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 16881040 - 16880976
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaata-tgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| |||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  16881040 cgattttcgttagatttatttttaattatttttattgtgtgtttatttgtgcttgtgtgtgatta 16880976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 18747996 - 18747932
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| |||||||||| | ||||||||    
T  18747996 cgattttcgttagatttattttttaattgttttaatacgtgttgatatgtgcttttatgtgatta 18747932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 47784080 - 47784138
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtg 284  Q
    ||||||||| |||| |||||||||||||||||| || ||| |||||||||||||||||||    
T  47784080 cgattttcgctagatttatttttaattgttttattacgtg-ttatatgtgcttgtgtgtg 47784138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11832264 - 11832338
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||| |||||||||||| | |  |||| || | ||||||||||||||||| |||||||||    
T  11832264 tgtaacaatccgattttcgctagaattattttaattaatttttatgtatgtttatatgtgcttgtatgtgattat 11832338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 3578987 - 3578922
Alignment:
Q  225 cgattttcgttagaatta-tttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||| |||||| |||||||  | |||||||||||||| ||||||||||||||    
T  3578987 cgattttcgttagatttactttttatttgttttgttgtgtgtttatatgtgtttgtgtgtgattat 3578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 11328289 - 11328366
Alignment:
Q  212 ttttgtaacaattcgattttcgttagaattatttttaatt-gttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||  ||||||||| |||| ||||||||||||  ||||| | ||||||||| ||||||||| ||||||||    
T  11328289 ttttgtaacaacccgattttcgctagatttatttttaattatttttattgtgtgtttatttgtgcttgtatgtgatta 11328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 12348650 - 12348695
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||    
T  12348650 ttttaattattttatcatgtgtttatatgtgcttgtgtgtgattat 12348695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 12559562 - 12559623
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||| ||||||| | || ||||| ||||||||||||||||||||| |||||||||    
T  12559562 ttttcgctagatttattttaattttttttattatgtgtttatatgtgcttgtatgtgattat 12559623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 11403484 - 11403420
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| | |||||||||||  ||||||| ||||||||||| ||| |||||||||||    
T  11403484 cgattttcgctagattaatttttaattgccttaatatatgtttatatgttcttctgtgtgattat 11403420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 15879245 - 15879182
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||  ||||| ||||| |||| || ||||||||| |||||||||||||||||||    
T  15879245 cgattttcgttagatgtatttctaattatttttat-tgtgtttatttgtgcttgtgtgtgattat 15879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 17394264 - 17394200
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| | ||||||||| || || | ||| |||||||||| |||||||||||||||||    
T  17394264 cgattttcgttaaatttatttttattttttattataagtgtttatatatgcttgtgtgtgattat 17394200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 40038295 - 40038359
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| || | ||| |||| ||||||||||||||| ||||| ||||||||||||| |||||    
T  40038295 cgattttcgctaaatttaattttgattgttttaatatgtatttatgtgtgcttgtgtgttattat 40038359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 4161590 - 4161652
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| ||||||| |||||||||||||||||||| ||| ||||| | ||||||||    
T  4161590 cgattttcgctagatttatttt-aattgttttaatatgtgtttttatatgcttttatgtgatta 4161652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 3575820 - 3575893
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||  ||||| ||||||||||||||||||||||  |||| | ||||||||| | | ||||||||||||||    
T  3575820 ttgtaacagctcgatcttcgttagaattatttttaatt-atttattgtgtgtttattttttcttgtgtgtgatta 3575893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 48422489 - 48422420
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||  |||||||||||||| ||||||| |||| ||||| | ||||||||  |||||||||||||||    
T  48422489 tgtaacaacccgattttcgttagatttatttt-aattattttattgtgtgtttaactgtgcttgtgtgtga 48422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 6146100 - 6146161
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||| ||||||| | |  ||||| | |||||||||||||| ||||||||||||||    
T  6146100 ttttcgttagatttattttaattacttttattgtgtgtttatatgtgtttgtgtgtgattat 6146161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 6153657 - 6153718
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||| ||||||| | |  ||||| | |||||||||||||| ||||||||||||||    
T  6153657 ttttcgttagatttattttcattacttttattgtgtgtttatatgtgtttgtgtgtgattat 6153718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 6713204 - 6713261
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatat 271  Q
    |||||||||  |||||| || || | ||||||||||||||||| ||||||||||||||    
T  6713204 ttgtaacaacccgatttccgctaaatttatttttaattgttttgatatgtgtttatat 6713261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 11881591 - 11881649
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||||||| ||||||||| || |||||   ||||||||| |||||||||||||||    
T  11881591 cgattttcgttagatttatttttacttatttta--ttgtgtttatttgtgcttgtgtgtga 11881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 16995413 - 16995474
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| |||||| ||||||| | |  ||||| |||||||||||||||| ||||||||||||||    
T  16995413 ttttagttagatttattttaattacttttattatgtgtttatatgtgtttgtgtgtgattat 16995474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 30208090 - 30208054
Alignment:
Q  240 ttatttttaattgttttaatatgtgtttatatgtgctt 277  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30208090 ttatttttaattgtttta-tatgtgtttatatgtgctt 30208054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 41662421 - 41662380
Alignment:
Q  248 aattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||| ||||| ||||||||| |||||||||||||||||||||    
T  41662421 aattattttagtatgtgtttttatgtgcttgtgtgtgattat 41662380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 55193563 - 55193514
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtg 274  Q
    |||||||||  ||| ||||||||||| |||||| ||||||||||||||||    
T  55193563 cgattttcgcaagatttatttttaatcgttttattatgtgtttatatgtg 55193514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 6224461 - 6224505
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||||||||||||| ||| ||||| | ||||||||    
T  6224461 ttttaattgttttaatatgtgtttttatatgcttttatgtgatta 6224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 13836498 - 13836470
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  13836498 tgtgtttatatgtgcttgtgtgtgattat 13836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 16181297 - 16181333
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  16181297 ttttattatgtgtttatatgtgtttgtgtgtgattat 16181333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 54037486 - 54037522
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  54037486 ttttattatgtgtttatatgtgtttgtgtgtgattat 54037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 24278651 - 24278577
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24278651 tgtaacaattcgattttcgcttgaattatttttaattgttttaatatgtgtttttatgtacttgtgtgtgattat 24278577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 9638285 - 9638211
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatattcttgg 299  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  9638285 cgattttcgctaaaattatttttaattgttttaatatgtgtttatatgtacttgtgtgtgattatttattattgg 9638211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 19433137 - 19433209
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| |||||| ||||| |||||||||||||||    
T  19433137 ttgtaacagttcgattttcgctagatttatttttaattgttttattatgtgcttataggtgcttgtgtgtgat 19433209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 68911 - 68840
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||  ||||||||| |||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  68911 tgtaacaacccgattttcgctagatttatttttaattgttttattatgtgtttaaatgtgcttgtgtgtgat 68840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 723296 - 723233
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||    
T  723296 cgattttcgctagatttatttttaattgttttattacgtgtttatatgtgcttgtgtgtgatta 723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 6095534 - 6095471
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  6095534 cgattttcgctagaattattttaaattgttttaatatgtgtttatatgtgtttgtgcgtgatta 6095471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 19660808 - 19660745
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| |||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19660808 gattttcgctagatttatttttaattgttttaatatgcatttatatgtgcttgtgtgtgattat 19660745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 19667455 - 19667392
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19667455 cgattttcgctagatttatttttacttgttttaatatgtgcttatatgtgcttgtgtgtgatta 19667392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 43646766 - 43646704
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  43646766 cgattttcgctagatttatttttaattgttttaat--gtgtttatatgtgcttgtgtgtgattat 43646704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 16292190 - 16292254
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  16292190 cgattttcgctagatttattttcaattgttttaacatgtgtttttatgtgcttgtgtgtgattat 16292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 24841773 - 24841728
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  24841773 ttttaattgttttaatatgtgtttttatgtgcttgtgtgtgattat 24841728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 25595899 - 25595838
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  25595899 attttcgctagaattatttt-aattgttttaatatgtgtttatatctgtttatgtgtgattat 25595838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 7322438 - 7322374
Alignment:
Q  224 tcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||| |||| ||| |||||||||||||| || ||||| ||||||||||||||||||||||    
T  7322438 tcgattttcgctagatttaattttaattgttttattacgtgtt-atatgtgcttgtgtgtgattat 7322374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 16446668 - 16446596
Alignment:
Q  213 tttgtaacaattcgattttcgttagaattatttttaa-ttgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| ||| ||||||||| |||| |||||||||| |||||||| |||||||||||| ||||||||||||||    
T  16446668 tttgtaataatccgattttcgctagatttatttttaaattgtttta-tatgtgtttatacgtgcttgtgtgtga 16446596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 11010562 - 11010499
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||| ||||||||||||||||  ||||||||||||||||| |||||| ||||||||    
T  11010562 cgattttcgctaggattatttttaattgttc-aatatgtgtttatatgtacttgtgcgtgattat 11010499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 22579238 - 22579278
Alignment:
Q  243 tttttaattgttttaatatgtgtttatatgtgcttgtgtgt 283  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22579238 tttttaattgttttattatgtgtttatatgtgcttgtgtgt 22579278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 24086770 - 24086834
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| |||| |||||||| |||| |||||||||| |||||| ||||||||||||||||||    
T  24086770 cgattttcgctagatttattttttaattattttaatatgcgtttatttgtgcttgtgtgtgatta 24086834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 24885572 - 24885506
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgttt--atatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||| |||||||||  |||| |||||||||| ||||||    
T  24885572 cgattttcgctagatttatttttaattgttttattatgtgtttatatatatgcttgtgtgcgattat 24885506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 2155188 - 2155258
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||  || ||||||||||| |||||||||||| ||||| | ||||||||  |||||||||||||||    
T  2155188 tgtaacaacccgtttttcgttagatttatttttaattattttattctgtgtttaattgtgcttgtgtgtga 2155258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 19668467 - 19668527
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||||||||||||| | ||||| ||  ||||| ||||||||| ||||||||||    
T  19668467 gattttcgttagaattatttttaagtattttatta--tgtttttatgtgcttatgtgtgatta 19668527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 24293862 - 24293901
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtg 264  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  24293862 cgattttcgttagatttatttttaattgtttttatatgtg 24293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 22762674 - 22762749
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaa--tatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| | ||||||| ||||||||| |||||||| ||||||  | ||||||||| |||||||||| |||||||    
T  22762674 ttgtaacaacttgattttcattagaatta-ttttaattattttaaattgtgtgtttatttgtgcttgtgcgtgatta 22762749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45572795 - 45572855
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45572795 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45572855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45576462 - 45576522
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45576462 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45576522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45580129 - 45580189
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45580129 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45580189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45583796 - 45583856
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45583796 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45583856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45587463 - 45587523
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45587463 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45591130 - 45591190
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45591130 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45594797 - 45594857
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45594797 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45594857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45598464 - 45598524
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45598464 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45602131 - 45602191
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45602131 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45602191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45605798 - 45605858
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45605798 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45605858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45609465 - 45609525
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45609465 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45609525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45613132 - 45613192
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45613132 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45613192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45616799 - 45616859
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| || ||||||||    
T  45616799 attttcgttagatttatttt-aattaattttatatgtgtttatatgtgctcgtatgtgatta 45616859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 2615 - 2679
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||||| ||||||| | |  ||||| | ||||||||| |||||||||||||||||||    
T  2615 cgatttttgttagatttattttaattatttttattgtgtgtttatttgtgcttgtgtgtgattat 2679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 22863794 - 22863758
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  22863794 ttttattatgtgtttatatgtgtttgtgtgtgattat 22863758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 23836066 - 23836094
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  23836066 tgtgtttatatgtgcttgtgtgtgattat 23836094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 25602929 - 25602893
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  25602929 ttttattatgtgtttatatgtacttgtgtgtgattat 25602893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 32791 - 32853
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32791 attttcggtagaattatttttaattgatttaatatgtgtttatatgtgcttgtgtgtgattat 32853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 743 - 806
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  743 cgattttcgttaaaattatttttaattgtttta-tatgtgtttatatgtgcttgtgtgtgattat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 26338 - 26425
Alignment:
Q  201 aaggagatggtttttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||| |||||||||   ||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26338 aaggaggtggtatttgtaacagcccgattctcgttagatttatttttaattgttttaatatgtgttt-tatgtgcttgtgtgtgattat 26425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 33398200 - 33398136
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33398200 cgattttcgctagaattattcttaattgttttaatatgtgtatatatgtgcttgtgtgtgattat 33398136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 5767553 - 5767623
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||| ||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  5767553 tgtaacaatccgatttttgctagaattattttaaattgttttaataagtgtttatatgtgcttgtgtgtga 5767623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 16646853 - 16646779
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | ||||||||  |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16646853 tgtaacagtccgattttccctagatttatttttaattattttaatatgtgtttatatgtgcttgtctgtgattat 16646779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 22828761 - 22828822
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  22828761 cgattttcgctagatttatttttaattgttttattatgtgtttatatgtgtttgtgtgtgat 22828822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 8537319 - 8537376
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  8537319 gattttcgttagatttatttttaattgtttta--atgtgtttatatgtgcttgtgtgtga 8537376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 8602558 - 8602615
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  8602558 gattttcgttagatttatttttaattgtttta--atgtgtttatatgtgcttgtgtgtga 8602615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 20839243 - 20839180
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  20839243 cgattttcgctagaattatttt-aattattttaatatgtgtttttatgtgcttgtgtgtgattat 20839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 25094739 - 25094676
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25094739 cgattttcgctataattatttttaattgttt-aatatgtgtttatttgtgcttgtgtgtgattat 25094676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 36355608 - 36355672
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  36355608 cgattttcgctagatttatttttaattgttttaatacatgtttatatgtgcttgtgtgtaattat 36355672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 5470360 - 5470423
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| | || |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5470360 gattttcgctggagttatttttaattgttttaatatatgtttttatgtgcttgtgtgtgattat 5470423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 38033008 - 38033083
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||| | ||||||||| || | |||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  38033008 ttgtaacagtccgattttcgctaaatttatttttaattgttttagtacgtgtttatatgtgtttgtgtgtgattat 38033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 52401479 - 52401417
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  52401479 gattttcgttagatttatttttaattgttttgatatgtgttt-tatgtgcttgtgcgtgattat 52401417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 19604031 - 19603966
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgt 279  Q
    |||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||    
T  19604031 ttgtaacagtccgattttcgctagatttatttttaattgttttattatgtgtttatatgtgattgt 19603966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 17023854 - 17023790
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||| ||||||||||| ||||| | |||||| || |||||||||||||||||||    
T  17023854 cgattttcgttagaactatttttaattattttattgtgtgttcatttgtgcttgtgtgtgattat 17023790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 17609781 - 17609718
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||  ||| |||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  17609781 cgattttcgcgagatttatttttaattgttttattatgtgtttatttgtgcttgtgtgcgatta 17609718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 37233225 - 37233289
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| |||||||||||||| ||| | | ||||||||| |||||||||||| ||||||    
T  37233225 cgattttcgttataattatttttaattatttaattgtgtgtttatttgtgcttgtgtgcgattat 37233289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 49996626 - 49996684
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||||||||||||||||| | |  ||||||||||||||| |||||||||||||||||    
T  49996626 gattttcgttagaattattttaattatttttaatatgtgttt-tatgtgcttgtgtgtga 49996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 21424115 - 21424041
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||||||| |||||||||||| | |  || | || ||||||||||||||||||| |||||||||    
T  21424115 tgtaacagttcgattttcgctagaattattttaattaattattatgtgtgtttatatgtgcttgtatgtgattat 21424041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 75783 - 75847
Alignment:
Q  225 cgattttcgttagaattatttttaattgtttt-aatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| |||||||||| ||||||||||||| |||| |||||| ||||||||||||||| |||||    
T  75783 cgatttttgttagaatta-ttttaattgttttaaatacgtgtttctatgtgcttgtgtgtaattat 75847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 9783415 - 9783475
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||| | ||||||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  9783415 attttcgttatatttatttt-aattgtttttatatgtgtttatttgtacttgtgtgtgatta 9783475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 18851787 - 18851846
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||| |||||||||||||||||| || ||||||||||||||| | |||||| |||||    
T  18851787 gattttcgctagaattatttttaattg-ttcaatatgtgtttatatatacttgtgcgtgat 18851846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 20178028 - 20177976
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgctt 277  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||  |||||||    
T  20178028 cgattttcgttagaattatttttaattattttattgtgtgtttaattgtgctt 20177976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 22142691 - 22142730
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtg 264  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  22142691 cgattttcgttagatttatttttaattgttttattatgtg 22142730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 21195853 - 21195812
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtt 266  Q
    |||| ||||||||| |||||||||||||||||| ||||||||    
T  21195853 cgatattcgttagatttatttttaattgttttattatgtgtt 21195812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 49968564 - 49968503
Alignment:
Q  228 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||| ||||||| | |  ||||| |||||||||||||||| ||||||||||||||    
T  49968564 ttttcgctagatttattttaattacttttattatgtgtttatatgtgtttgtgtgtgattat 49968503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 21719130 - 21719094
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  21719130 ttttattatgtgtttatatatgcttgtgtgtgattat 21719094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 14891 - 14832
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14891 gattttcgctagaattttttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 14832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 2314 - 2372
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2314 attttcgctagaattatttttaattgttttaatatgtgtttatatgtgtttgtgtgtga 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 86410 - 86348
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  86410 attttcgttagatttatttttaattgttttattatgtgtttttatgtgcttgtgtgtgattat 86348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 9718 - 9674
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  9718 ttttaattgttttattacgtgtttatatgtgctcgtatgtgatta 9674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 54185 - 54122
Alignment:
Q  224 tcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||||||| ||| ||||| || ||||| | ||||||||| |||| |||||||||||||    
T  54185 tcgattttcgttagatttaatttta-ttattttattgtgtgtttatttgtgtttgtgtgtgatta 54122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 2500 - 2574
Alignment:
Q  213 tttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| ||||||||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  2500 tttgtaacagttcgattttcgcta-aattatttt-aattgttttattatgtgtttatatgtgcttgtgtgtgattat 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 7267 - 7203
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7267 cgattttcgctagagttatttttaattgttttattatgtgtttttatgtgcttgtgtgtgattat 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 5452 - 5392
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5452 cgattttcgttagatttatttttaattgttttaatacgtgtttatacgtgcttgtgtgtga 5392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 32729 - 32793
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgt 279  Q
    ||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  32729 tgtaacagtccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgcttgt 32793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 69643 - 69715
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||||||||||  |||| |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  69643 ttgtaacaattcgattttctctagatttatttttcattgttttattatgtggttatatgtgcttgtgtgtgat 69715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 6735 - 6669
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtg 280  Q
    |||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  6735 ttgtaacaacccgattttcgatagatttatttttaattgttttaatatgtgtttatatgtgcctgtg 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 196647 - 196709
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  196647 cgattttcgctagatttatttttaattgttttattatgtgtttatttgtgcttgtgtgtgatt 196709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 13197 - 13136
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  13197 cgattttcgctagatttatttctaattgttttaatacgtgtttatatgtgcttgtgtgtgat 13136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 9346 - 9278
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatatt 294  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9346 cgattgtcgctagaattatttt-aattgttttaatatgtgtttatatgtgcttgtttgtgattatctatt 9278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 3378 - 3314
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||  |||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  3378 cgattttcgttagatctatttttaattggtttattatgtgtttatttgtgcttgtgtgtgattat 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 243 - 307
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  243 cgattttcgctagaattattattaattgtttttatatttgtatatatgtgcttgtgtgtgattat 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 324 - 388
Alignment:
Q  226 gattttcgttagaattatttt-taattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  324 gattttcgttagatttattttttaattgttttaatatgtgtttctatgtgcttttgtgtgattat 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 11994 - 12057
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  11994 cgattttcgctaga-ttatttttaattgttttaatatgtctttatatgtgcttgtgcgtgattat 12057  T

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Target: scaffold0165 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 30842 - 30778
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  30842 cgatttttgctagattaatttttaattgttttaatatgtgtttttatgtgcttgtgtgtgattat 30778  T

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Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 11817 - 11741
Alignment:
Q  212 ttttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||||   ||||||||| |||| |||||||||||||||||| |||||||||  |||||||||||||||||||    
T  11817 ttttgtaacagcccgattttcgctagatttatttttaattgttttattatgtgtttgaatgtgcttgtgtgtgatta 11741  T

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Target: scaffold0080 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 23081 - 23144
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  23081 cgattttcgttagatttatttt-aattgttttattatgtgtttatttgtgcttgtgtgtgattat 23144  T

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Target: scaffold0231 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 12057 - 12120
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||||| | ||||||||    
T  12057 cgattttcgttagatttatttttaattgttttaatacgtgttgatatgtgcttatatgtgatta 12120  T

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Target: scaffold0610 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 9432 - 9490
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    ||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  9432 attttcgctagatttatttttatttgttttattatgtgtttatatgtgcttgtgtgtga 9490  T

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Target: scaffold0162 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 6408 - 6457
Alignment:
Q  240 ttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6408 ttatttttaatagttttattatgtgtttatatgtgcttgtgtgtgattat 6457  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 108895 - 108823
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||  ||||||| | |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  108895 tgtaacaacccgatttttgctagaattatttt-aattgttttattatgtgtttttatgtgcttgtgtgtgatta 108823  T

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Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 87234 - 87172
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  87234 cgattttcgctagaattatttttaattgtttta--atgtgtttttatgtgtttgtgtgtgattat 87172  T

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Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 28350 - 28288
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||  |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  28350 cgattttcactagaattatttt-aattgttttaatatgtatttttatgtgcttgtgtgtgatta 28288  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 192847 - 192900
Alignment:
Q  235 tagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||| ||||||| |||  ||||| |||||||||||||||| |||||||||||||    
T  192847 tagatttattttgaatacttttattatgtgtttatatgtgtttgtgtgtgatta 192900  T

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Target: scaffold0634 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 6289 - 6234
Alignment:
Q  233 gttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  6289 gttagatttatttttaattgttttaatatgtgttt-tatgtgcatgtgtgtgattat 6234  T

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Target: scaffold0389 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 11382 - 11319
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||||||| |||| ||||||| || | |||||||||||||||||||    
T  11382 cgattttcgttagaattatttttaattatttt-atatgtgcttttttgtgcttgtgtgtgattat 11319  T

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Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 80467 - 80404
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  80467 cgattttcgttagatttatttg-aattgttttaatatgcatttatatgtgcttgtgtgtgattat 80404  T

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Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 180256 - 180308
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgttt 267  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  180256 tgtaacagttcgattttcgctagatttatttttaattgttttaatatgtgttt 180308  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 103938 - 104001
Alignment:
Q  226 gattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||| |||| |||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  103938 gattttcgctagatttattttttaattattttaataagtgtttatatgtgcttgtgtgtgatta 104001  T

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Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 89197 - 89271
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||  |||||||| |||| |||||||||||||||||| || ||| ||||||||| ||||||||||||||    
T  89197 ttgtaacaatcagattttcgctagatttatttttaattgttttattacgtg-ttatatgtgattgtgtgtgattat 89271  T

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Target: scaffold0315 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11859 - 11933
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||  |||||||||||||| ||||||||||||||||| || ||||||||| | |||| || |||||||||    
T  11859 tgtaacaacccgattttcgttagatttatttttaattgtttttatgtgtgtttatttatgctcgtatgtgattat 11933  T

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Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 33046 - 33107
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttata--tgtgcttgtgtgtgat 286  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  33046 attttcgctagatttatttttaattgttttattatgtgtttatatgtgtgcttgtgtgtgat 33107  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 31909 - 31835
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| | ||||||| |||| |||||||||||| ||||| | ||||||||| ||||||| |||||||||||    
T  31909 tgtaacaatccaattttcgctagatttatttttaattattttattgtgtgtttatttgtgcttttgtgtgattat 31835  T

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Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 912 - 974
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||||||||||||||||| |||||  |||||||||| ||||||| ||||| |||||    
T  912 cgattttcgttagaattatttttaattatttta--atgtgtttatttgtgcttctgtgtaattat 974  T

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Target: scaffold0151 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 21732 - 21795
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| | |||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  21732 cgatttttgctagatttatttttaattgttttaataggtg-ttatatgtgcttgtgtgttattat 21795  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 70339 - 70276
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||||| || | |||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  70339 cgattttcgctatatttatttttaattattttattgtgtgtttatttgtgcttgtgtgtgatta 70276  T

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Target: scaffold0589 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 8713 - 8651
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||| |||| |||||||| |||||||||| |||||  |||||||||||||||||||||    
T  8713 cgattttcgctagatttattttttaattgttttattatgttgttatatgtgcttgtgtgtgat 8651  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 160212 - 160166
Alignment:
Q  240 ttatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||    
T  160212 ttatttttaattgtttatttatgtgtttatatgtgcttgtgtgtgat 160166  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 202194 - 202265
Alignment:
Q  215 tgtaacaattcgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||| |||||| |||||||| |||||||| ||| | || ||| ||||||||||||||| ||||||    
T  202194 tgtaacaattcgtttttcgatagaatta-ttttaattatttattatgtgtatttatatgtgcttgtatgtgat 202265  T

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Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 978 - 916
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||| ||||||| ||||||||||| |||||  |||||||||| ||||||||||||| |||||    
T  978 cgatttttgttagaaatatttttaattatttta--atgtgtttatttgtgcttgtgtgtaattat 916  T

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Target: scaffold0808 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 1637 - 1693
Alignment:
Q  229 tttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||| |||| |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  1637 tttcgctagatttatttttaattgttt-attatgtgtttatatgtgcttctgtgtgat 1693  T

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Target: scaffold0090 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 33839 - 33887
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattatatat 293  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  33839 ttttaattgttttaatatatattt-tatgtgcttgtgtgtgattatatat 33887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 71522 - 71477
Alignment:
Q  244 ttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  71522 ttttaattgttttattatgtgtttatgtgtgcttgtatgtgattat 71477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 4088 - 4027
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||| |||||||||||| ||||| ||  | ||| ||||||||||||||||||||    
T  4088 cgattttcgttagatttatttttaattattttatta--tttttttatgtgcttgtgtgtgatta 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 11905 - 11853
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgctt 277  Q
    |||||||||||| || | ||||||||| ||||||||||||||||||| |||||    
T  11905 cgattttcgttaaaaatgtttttaattattttaatatgtgtttatatctgctt 11853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 30982 - 30946
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  30982 ttttattatgtgtttatatgtgcttgtgtgtgattat 30946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 15731 - 15695
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15731 ttttattatgtgtttatatgtgcttgtgtgtgattat 15695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 1161 - 1099
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    |||||||||||||| |||||||||||| |||||   ||| ||| | |||||||||||||||||    
T  1161 cgattttcgttagatttatttttaattattttatggtgtctttttttgtgcttgtgtgtgatt 1099  T

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Target: scaffold0120 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 22391 - 22361
Alignment:
Q  259 tatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||||    
T  22391 tatgtgtttatatgtgcttgtgtgtgattat 22361  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 4227 - 4165
Alignment:
Q  225 cgattttcgttagaattattttt-aattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||||||| |||||||| |||| ||||| |||  | |||||||||||||||||||||    
T  4227 cgattttcgttagatttattttttaattattttattataaggttatatgtgcttgtgtgtgat 4165  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 13680 - 13618
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||| | |||| ||||||||||||||||||||| | ||| |||||||||| | ||||||||    
T  13680 gatttttgctagatttatttttaattgttttaatacgcgttgatatgtgcttttatgtgatta 13618  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 36352 - 36290
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||||||   |||||||||| ||||| | ||||||||| ||| |||||||||||||||    
T  36352 attttcgttagatgaatttttaattattttattgtgtgtttatttgtacttgtgtgtgattat 36290  T

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Target: scaffold0643 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 416 - 355
Alignment:
Q  225 cgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    ||||||| | |||| |||||||||||||||||| || || ||||| ||||||||||| ||||    
T  416 cgatttttgctagatttatttttaattgttttattacgtatttatgtgtgcttgtgtctgat 355  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 11032 - 11092
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    ||||||| |||| ||| ||||| |||||||| || ||||| |||||||||||||||||||||    
T  11032 attttcgctagatttacttttagttgttttattacgtgtt-atatgtgcttgtgtgtgatta 11092  T

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Target: scaffold0228 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 6318 - 6382
Alignment:
Q  225 cgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||| ||| | || ||||||||||||||||||| |||||||||    
T  6318 cgattttcgctagaattatttt-aattatttattatgtgtgtttatatgtgcttgtatgtgattat 6382  T

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Target: scaffold0228; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13900 - 13964
Alignment:
Q  225 cgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||| ||| | || ||||||||||||||||||| |||||||||    
T  13900 cgattttcgctagaattatttt-aattatttattatgtgtgtttatatgtgcttgtatgtgattat 13964  T

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Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 23852 - 23916
Alignment:
Q  225 cgattttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||||||| |||||||||||| |||| ||| | || ||||||||||||||||||| |||||||||    
T  23852 cgattttcgctagaattatttt-aattatttattatgtgtgtttatatgtgcttgtatgtgattat 23916  T

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Target: scaffold1867 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 1041 - 1005
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| || ||||||||||||||||||||||||||||    
T  1041 ttttattacgtgtttatatgtgcttgtgtgtgattat 1005  T

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Target: scaffold0740 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 5180 - 5144
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  5180 ttttattatgtgtttatatgtgtttgtgtgtgattat 5144  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 7542 - 7482
Alignment:
Q  227 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgatt 287  Q
    |||||||||||| |||||||||||| |||||   ||||||||| | ||||| |||||||||    
T  7542 attttcgttagatttatttttaattattttacggtgtgtttatttatgcttttgtgtgatt 7482  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 9878 - 9850
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  9878 tgtgtttatatgtgcttgtgtgtgattat 9850  T

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Target: scaffold0186 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 19897 - 19838
Alignment:
Q  229 tttcgttagaattatttttaattgttt-taatatgtgtttatatgtgcttgtgtgtgatta 288  Q
    |||||||||||||||||| |||| ||| | ||||||||||||||||| || ||||||||||    
T  19897 tttcgttagaattatttt-aattatttattatatgtgtttatatgtgtttatgtgtgatta 19838  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 30646 - 30682
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  30646 ttttattatgtgtttatatgtgtttgtgtgtgattat 30682  T

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Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 38435 - 38379
Alignment:
Q  226 gattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtga 285  Q
    |||||||| ||||||| |||| ||||||||||||  |||||| |||||||||||||||||    
T  38435 gattttcgctagaattgtttt-aattgttttaat--gtgtttttatgtgcttgtgtgtga 38379  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 10925 - 10953
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  10925 tgtgtttatatgtgcttgtgtgtgattat 10953  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 42198 - 42162
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  42198 ttttattatgtgtttatatgtgtttgtgtgtgattat 42162  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 43514 - 43562
Alignment:
Q  241 tatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||| |||||||||||||||| ||||||||||||  ||||| |||||    
T  43514 tattttcaattgttttaatatgtatttatatgtgctcatgtgtaattat 43562  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 108821 - 108849
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  108821 tgtgtttatatgtgcttgtgtgtgattat 108849  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 117322 - 117350
Alignment:
Q  261 tgtgtttatatgtgcttgtgtgtgattat 289  Q
    |||||||||||||||||||||||||||||    
T  117322 tgtgtttatatgtgcttgtgtgtgattat 117350  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 16839 - 16767
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||  ||||||||| | || ||||||| | |  ||||| | ||||||||||||||||||||||||||    
T  16839 ttgtaacaacccgattttcgctcgatttattttaattaattttattgtgtgtttatatgtgcttgtgtgtgat 16767  T

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Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 26370 - 26298
Alignment:
Q  214 ttgtaacaattcgattttcgttagaattatttttaattgttttaatatgtgtttatatgtgcttgtgtgtgat 286  Q
    |||||||||  ||||||||| | || ||||||| | |  ||||| | ||||||||||||||||||||||||||    
T  26370 ttgtaacaacccgattttcgctcgatttattttaattaattttattgtgtgtttatatgtgcttgtgtgtgat 26298  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 165109 - 165073
Alignment:
Q  253 ttttaatatgtgtttatatgtgcttgtgtgtgattat 289  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  165109 ttttattatgtgtttatatgtgtttgtgtgtgattat 165073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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