View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19316_high_10 (Length: 393)

Name: NF19316_high_10
Description: NF19316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19316_high_10
NF19316_high_10
[»] chr2 (48 HSPs)
chr2 (14-393)||(3854067-3854446)
chr2 (14-393)||(12089695-12090074)
chr2 (14-393)||(22701517-22701892)
chr2 (16-393)||(34037952-34038340)
chr2 (16-393)||(1804375-1804751)
chr2 (16-393)||(6476088-6476464)
chr2 (16-393)||(11450899-11451275)
chr2 (16-393)||(26525463-26525841)
chr2 (16-393)||(27377650-27378026)
chr2 (16-393)||(39096667-39097045)
chr2 (27-392)||(38110140-38110492)
chr2 (303-393)||(1804233-1804322)
chr2 (303-393)||(6476517-6476606)
chr2 (304-393)||(3854498-3854586)
chr2 (303-393)||(10708024-10708114)
chr2 (304-393)||(12090126-12090214)
chr2 (304-393)||(39096525-39096613)
chr2 (303-393)||(11450757-11450846)
chr2 (303-393)||(27378079-27378168)
chr2 (304-393)||(26525895-26525983)
chr2 (302-393)||(10709476-10709567)
chr2 (302-393)||(39947084-39947175)
chr2 (303-393)||(44934682-44934772)
chr2 (304-393)||(34037810-34037898)
chr2 (302-393)||(39945843-39945934)
chr2 (311-393)||(24093330-24093412)
chr2 (311-393)||(32861047-32861129)
chr2 (304-393)||(23221835-23221924)
chr2 (304-393)||(44929984-44930073)
chr2 (301-393)||(18107422-18107514)
chr2 (305-393)||(23222864-23222952)
chr2 (284-387)||(18105723-18105826)
chr2 (302-388)||(10710828-10710914)
chr2 (305-393)||(2035609-2035697)
chr2 (305-393)||(2191218-2191306)
chr2 (349-393)||(22704429-22704473)
chr2 (318-392)||(2191392-2191466)
chr2 (316-393)||(21182308-21182385)
chr2 (304-341)||(22701945-22701982)
chr2 (305-393)||(2036604-2036692)
chr2 (305-393)||(21217322-21217410)
chr2 (305-393)||(21264992-21265080)
chr2 (302-393)||(10711000-10711091)
chr2 (327-388)||(2517579-2517641)
chr2 (316-393)||(3624925-3625002)
chr2 (353-393)||(7083696-7083736)
chr2 (305-393)||(21216924-21217012)
chr2 (305-393)||(21265390-21265478)
[»] chr7 (26 HSPs)
chr7 (14-393)||(28898170-28898549)
chr7 (14-393)||(1244012-1244391)
chr7 (18-393)||(41298245-41298620)
chr7 (88-393)||(884683-884988)
chr7 (16-393)||(33847867-33848243)
chr7 (16-393)||(29784078-29784467)
chr7 (16-393)||(18443177-18443555)
chr7 (16-229)||(22954189-22954402)
chr7 (304-393)||(1244443-1244531)
chr7 (292-393)||(18443597-18443697)
chr7 (304-393)||(28898030-28898118)
chr7 (304-393)||(41298676-41298764)
chr7 (304-393)||(29783936-29784024)
chr7 (315-393)||(28838526-28838604)
chr7 (303-393)||(33848296-33848385)
chr7 (301-393)||(22954047-22954138)
chr7 (311-393)||(20544145-20544227)
chr7 (303-393)||(30939563-30939653)
chr7 (315-392)||(20544321-20544398)
chr7 (316-393)||(49053719-49053796)
chr7 (308-393)||(11974894-11974975)
chr7 (303-346)||(27310095-27310138)
chr7 (314-374)||(10466635-10466695)
chr7 (304-348)||(27311048-27311092)
chr7 (305-393)||(17075618-17075706)
chr7 (305-393)||(32092229-32092317)
[»] chr6 (29 HSPs)
chr6 (14-392)||(33106931-33107309)
chr6 (16-393)||(15147719-15148095)
chr6 (16-393)||(20824165-20824541)
chr6 (16-393)||(6162246-6162634)
chr6 (16-393)||(14257148-14257524)
chr6 (14-226)||(34984283-34984495)
chr6 (30-215)||(20227740-20227923)
chr6 (30-215)||(22121724-22121907)
chr6 (256-393)||(20228187-20228323)
chr6 (256-393)||(22122171-22122307)
chr6 (304-393)||(6162688-6162776)
chr6 (304-393)||(33107361-33107449)
chr6 (303-393)||(20824594-20824683)
chr6 (304-393)||(34984545-34984632)
chr6 (292-393)||(14257566-14257666)
chr6 (311-393)||(14712831-14712913)
chr6 (301-393)||(15148146-15148237)
chr6 (305-393)||(20522157-20522244)
chr6 (305-393)||(8710341-8710429)
chr6 (311-393)||(8709601-8709677)
chr6 (305-393)||(5974012-5974100)
chr6 (305-393)||(19595650-19595738)
chr6 (317-393)||(21113203-21113279)
chr6 (304-392)||(20227059-20227146)
chr6 (304-392)||(22121043-22121130)
chr6 (301-348)||(20521231-20521278)
chr6 (305-339)||(19579203-19579237)
chr6 (316-393)||(7645994-7646071)
chr6 (305-393)||(211442-211530)
[»] chr4 (59 HSPs)
chr4 (14-393)||(43979558-43979937)
chr4 (14-389)||(12922783-12923158)
chr4 (14-393)||(46262776-46263155)
chr4 (14-393)||(30545714-30546094)
chr4 (14-393)||(790036-790415)
chr4 (14-393)||(1317061-1317440)
chr4 (16-393)||(28957454-28957830)
chr4 (16-393)||(40841463-40841839)
chr4 (16-393)||(38025819-38026195)
chr4 (16-392)||(55347563-55347938)
chr4 (16-393)||(31228022-31228398)
chr4 (16-393)||(28505210-28505587)
chr4 (18-393)||(2669152-2669526)
chr4 (16-393)||(21235029-21235407)
chr4 (257-393)||(12108242-12108377)
chr4 (304-393)||(12922643-12922731)
chr4 (304-393)||(43979989-43980077)
chr4 (303-393)||(28957312-28957401)
chr4 (303-393)||(31227880-31227969)
chr4 (303-393)||(40841892-40841981)
chr4 (304-393)||(789896-789984)
chr4 (292-393)||(21235449-21235548)
chr4 (304-393)||(30546146-30546234)
chr4 (303-393)||(47053762-47053852)
chr4 (292-393)||(2669008-2669108)
chr4 (312-393)||(10580041-10580122)
chr4 (292-393)||(38025677-38025777)
chr4 (304-393)||(47058507-47058596)
chr4 (306-393)||(1317494-1317580)
chr4 (318-393)||(1791389-1791464)
chr4 (305-387)||(55347970-55348051)
chr4 (304-393)||(46262636-46262724)
chr4 (304-393)||(54167495-54167584)
chr4 (305-393)||(17288374-17288462)
chr4 (305-393)||(54142326-54142414)
chr4 (305-392)||(12107708-12107794)
chr4 (311-393)||(29691746-29691828)
chr4 (313-393)||(7118002-7118081)
chr4 (305-393)||(49426353-49426441)
chr4 (305-393)||(54143502-54143590)
chr4 (311-393)||(5545018-5545100)
chr4 (305-393)||(17287488-17287576)
chr4 (304-393)||(7164989-7165079)
chr4 (318-392)||(48554071-48554145)
chr4 (301-349)||(28505638-28505686)
chr4 (305-393)||(49424455-49424543)
chr4 (314-393)||(26168166-26168245)
chr4 (318-392)||(3296719-3296793)
chr4 (318-392)||(35166708-35166782)
chr4 (304-393)||(54168823-54168912)
chr4 (318-392)||(51906595-51906668)
chr4 (335-393)||(51906677-51906735)
chr4 (340-393)||(5544958-5545011)
chr4 (316-393)||(7118176-7118253)
chr4 (305-393)||(29691526-29691614)
chr4 (305-393)||(3296544-3296632)
chr4 (305-393)||(34129301-34129389)
chr4 (311-343)||(35468887-35468919)
chr4 (305-393)||(51906820-51906908)
[»] chr1 (34 HSPs)
chr1 (14-393)||(30427674-30428053)
chr1 (14-393)||(45230130-45230509)
chr1 (14-393)||(17968178-17968557)
chr1 (16-393)||(46802323-46802699)
chr1 (18-393)||(47410568-47410942)
chr1 (16-393)||(32266484-32266860)
chr1 (16-393)||(40124077-40124453)
chr1 (16-393)||(9122686-9123062)
chr1 (304-393)||(17968038-17968126)
chr1 (303-393)||(32266913-32267002)
chr1 (304-393)||(30428105-30428193)
chr1 (304-393)||(45230561-45230649)
chr1 (303-393)||(40124506-40124595)
chr1 (292-393)||(46802741-46802841)
chr1 (292-393)||(47410424-47410524)
chr1 (301-393)||(9123113-9123204)
chr1 (311-393)||(3591171-3591253)
chr1 (302-393)||(8997341-8997432)
chr1 (303-393)||(1500980-1501070)
chr1 (262-333)||(8998193-8998264)
chr1 (311-393)||(19895574-19895656)
chr1 (304-393)||(36793574-36793663)
chr1 (305-393)||(37717797-37717884)
chr1 (327-393)||(50359290-50359356)
chr1 (315-393)||(5683335-5683413)
chr1 (315-393)||(18180053-18180131)
chr1 (304-393)||(45664688-45664777)
chr1 (313-393)||(12869663-12869743)
chr1 (305-393)||(18179880-18179968)
chr1 (309-393)||(31889435-31889519)
chr1 (306-341)||(12868486-12868521)
chr1 (303-348)||(1500105-1500150)
chr1 (304-393)||(36792241-36792329)
chr1 (305-341)||(5172798-5172834)
[»] chr8 (28 HSPs)
chr8 (16-391)||(12734316-12734691)
chr8 (17-393)||(29917249-29917626)
chr8 (38-215)||(42253302-42253479)
chr8 (304-393)||(29917106-29917194)
chr8 (304-393)||(12734174-12734262)
chr8 (301-393)||(24845964-24846055)
chr8 (311-393)||(21005956-21006038)
chr8 (304-393)||(4624534-4624623)
chr8 (270-393)||(4624361-4624484)
chr8 (311-393)||(44024399-44024481)
chr8 (311-392)||(10047653-10047734)
chr8 (311-393)||(6297636-6297718)
chr8 (304-393)||(20682924-20683013)
chr8 (304-393)||(36155272-36155361)
chr8 (306-393)||(4694434-4694521)
chr8 (305-387)||(6297863-6297945)
chr8 (315-393)||(11089133-11089211)
chr8 (304-392)||(26720323-26720411)
chr8 (315-393)||(20682709-20682787)
chr8 (304-393)||(44148578-44148667)
chr8 (304-392)||(16682533-16682621)
chr8 (305-393)||(40304685-40304773)
chr8 (305-348)||(6298036-6298079)
chr8 (305-348)||(36156359-36156402)
chr8 (361-391)||(12734706-12734736)
chr8 (305-359)||(22601534-22601587)
chr8 (316-345)||(45369134-45369163)
chr8 (305-393)||(9800344-9800432)
[»] chr5 (41 HSPs)
chr5 (6-393)||(3878773-3879160)
chr5 (14-393)||(31092996-31093375)
chr5 (18-393)||(21949401-21949775)
chr5 (16-393)||(28641304-28641680)
chr5 (16-393)||(31162422-31162798)
chr5 (16-393)||(5746904-5747280)
chr5 (16-393)||(6543416-6543792)
chr5 (16-393)||(3191799-3192177)
chr5 (16-393)||(39402355-39402733)
chr5 (292-393)||(39402213-39402313)
chr5 (303-393)||(31162851-31162940)
chr5 (304-393)||(3192231-3192319)
chr5 (303-393)||(28641162-28641251)
chr5 (304-393)||(31093427-31093515)
chr5 (301-393)||(119011-119103)
chr5 (301-393)||(119955-120047)
chr5 (303-393)||(5746762-5746851)
chr5 (303-393)||(21949830-21949919)
chr5 (270-393)||(19352300-19352423)
chr5 (303-393)||(6543845-6543933)
chr5 (304-393)||(718224-718313)
chr5 (304-393)||(3879204-3879292)
chr5 (304-393)||(14626089-14626178)
chr5 (263-393)||(14625123-14625252)
chr5 (306-393)||(119185-119272)
chr5 (302-393)||(19353067-19353158)
chr5 (304-393)||(4186755-4186844)
chr5 (301-393)||(19353235-19353327)
chr5 (306-388)||(119786-119868)
chr5 (311-393)||(3406692-3406774)
chr5 (303-348)||(19352517-19352562)
chr5 (305-393)||(4187837-4187925)
chr5 (314-393)||(18999367-18999446)
chr5 (312-348)||(8647358-8647394)
chr5 (305-393)||(18999641-18999729)
chr5 (304-348)||(30351704-30351748)
chr5 (302-393)||(37813376-37813467)
chr5 (315-348)||(18340661-18340694)
chr5 (353-393)||(87137-87177)
chr5 (304-348)||(30350647-30350691)
chr5 (317-392)||(31176682-31176758)
[»] chr3 (41 HSPs)
chr3 (14-393)||(22406843-22407222)
chr3 (14-393)||(34949897-34950276)
chr3 (52-393)||(27475477-27475818)
chr3 (16-393)||(45539352-45539728)
chr3 (17-393)||(42606281-42606656)
chr3 (16-393)||(36899255-36899631)
chr3 (16-390)||(2388636-2389009)
chr3 (16-393)||(46689683-46690059)
chr3 (16-393)||(4199454-4199832)
chr3 (292-393)||(4199874-4199974)
chr3 (304-393)||(34949757-34949845)
chr3 (303-393)||(46690112-46690201)
chr3 (308-393)||(27475391-27475475)
chr3 (303-393)||(45539210-45539299)
chr3 (304-393)||(22407274-22407362)
chr3 (292-393)||(42606699-42606799)
chr3 (303-393)||(20826729-20826819)
chr3 (292-393)||(2389051-2389151)
chr3 (292-393)||(36899673-36899773)
chr3 (304-393)||(20831101-20831190)
chr3 (305-393)||(48868588-48868676)
chr3 (311-393)||(25770495-25770577)
chr3 (262-345)||(35300793-35300876)
chr3 (315-393)||(44504266-44504344)
chr3 (311-393)||(9218348-9218430)
chr3 (319-393)||(27013583-27013657)
chr3 (311-393)||(37172255-37172337)
chr3 (305-392)||(54588458-54588546)
chr3 (305-393)||(3799723-3799811)
chr3 (305-393)||(44504387-44504475)
chr3 (305-393)||(48867651-48867739)
chr3 (314-393)||(132069-132148)
chr3 (315-393)||(131948-132026)
chr3 (311-381)||(50732367-50732437)
chr3 (311-381)||(50780418-50780488)
chr3 (303-348)||(7248488-7248533)
chr3 (311-383)||(26741138-26741210)
chr3 (305-393)||(47342747-47342835)
chr3 (304-348)||(51587575-51587619)
chr3 (305-392)||(33225490-33225577)
chr3 (305-358)||(47343726-47343779)
[»] scaffold0085 (2 HSPs)
scaffold0085 (16-393)||(39564-39940)
scaffold0085 (303-393)||(39422-39511)
[»] scaffold0148 (2 HSPs)
scaffold0148 (304-393)||(32994-33083)
scaffold0148 (303-393)||(29275-29365)
[»] scaffold0009 (2 HSPs)
scaffold0009 (315-393)||(107896-107974)
scaffold0009 (305-392)||(108123-108210)
[»] scaffold0063 (1 HSPs)
scaffold0063 (311-393)||(34966-35048)
[»] scaffold0177 (1 HSPs)
scaffold0177 (305-393)||(25843-25931)


Alignment Details
Target: chr2 (Bit Score: 364; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 3854446 - 3854067
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3854446 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 3854347  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3854346 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 3854247  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3854246 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 3854147  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3854146 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 3854067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 12090074 - 12089695
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12090074 aggccatcataacaagtttaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 12089975  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  12089974 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaaaatcgtggtga 12089875  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12089874 agttctccgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 12089775  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12089774 ggattttaaaaacatttattgaaatgtaagaactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaac 12089695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 22701892 - 22701517
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22701892 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 22701793  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  22701792 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtgctga 22701693  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  22701692 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacattaactcaggaaaaatgtag 22701593  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  22701592 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgt----accaaaaacatatttaac 22701517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 34037952 - 34038340
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34037952 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 34038051  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggt---- 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||||||||| |||        
T  34038052 gcctccaaatcttcccctctaaaccaacatatttcaccggaagtgcgacgaacaccggtgatccgcatctacgacgctgcggagaaagatcgcggtgaag 34038151  T
Q  212 --------gaagttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcagg 303  Q
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  34038152 ttcatagggaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactgagg 34038251  T
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| |||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  34038252 aaaaatgtaggaattttaaaaatatttattgaaatgtaaaaact-attctcaaaatcgtgcaaaacgtagggaccaaatacgtatttaac 34038340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 1804375 - 1804751
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  1804375 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 1804474  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  1804475 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 1804574  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  1804575 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 1804674  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  1804675 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 1804751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 6476464 - 6476088
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  6476464 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 6476365  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  6476364 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 6476265  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  6476264 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 6476165  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  6476164 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 6476088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 11450899 - 11451275
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  11450899 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 11450998  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  11450999 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 11451098  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  11451099 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 11451198  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  11451199 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 11451275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 26525841 - 26525463
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  26525841 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcgctttcaatgataacatcatcgctttcg 26525742  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||    
T  26525741 gcctccaaatattcccctctaaaccaacatatttcatcggaagtgtgacgaacagcggcgatccacatctacgacgctgcggagaaagatcgtggtgaag 26525642  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||     |  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  26525641 ttcatagggaagttttccggcgagattgaactgccaacattggcatcacgttagaaatttgacaacagggactatttacactaattgaggaaaaatgtag 26525542  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  26525541 ggattttaaaaatatttattgaaatgtaagaact-actctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 26525463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 27378026 - 27377650
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  27378026 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 27377927  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  27377926 gcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 27377827  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||| |||||  |||||||||||||||    
T  27377826 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgataacagggactatttacgctaacggaggaaaaatgtaggg 27377727  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  27377726 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 27377650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 39096667 - 39097045
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39096667 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcg 39096766  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||  ||||||   ||||||| |||||| ||||||||||||||||||    
T  39096767 gcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccatgtctacgacgctgcgaagaaagatcgtggtgaag 39096866  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| ||||||| ||||  ||||||||| | |||||||||||| |||||  |||||||||||||    
T  39096867 ctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacggaggaaaaatgtag 39096966  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  39096967 ggattttaaaaacatttattgaaatgtaagga-ttattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 39097045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 392
Target Start/End: Original strand, 38110140 - 38110492
Alignment:
Q  27 aagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatc 126  Q
    |||||||||||||||||| ||||||||||  ||| |||||||||||| |||||||||| || |||| ||| ||||||||||| || |  |||||||||||    
T  38110140 aagttcaaccccaccccatcaaatctccataacatcaccttccacactcgcaacaacacgcacttttaactataacatcatcactctttgcctccaaatc 38110239  T
Q  127 ttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagttctccgccgt 226  Q
    ||||||         |||||||||||||||| |||||| |||||||  ||||||||||||||| | |||||| |||||||||| |||| ||| | |||||    
T  38110240 ttcccc---------acatatttcactggaaatgtgacaaacaccggtgatccgcatctacgacgatgcggaaaaagatcgtgatgaaattccctgccgt 38110330  T
Q  227 tttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaac 326  Q
    ||| | | ||||||||  |||||||||||||||||||||| | ||||||||||  ||||||||||  |||||  |||||||||||||||||||| |||||    
T  38110331 ttttcggtgagattgattcgccaacattggcatcacgttaaatatttgacaacatggactatttaagctaacggaggaaaaatgtagggattttgaaaac 38110430  T
Q  327 atttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||   ||||||| ||||||||| ||||||| | | |||| ||||||| |||| ||||||||||    
T  38110431 attta---aaatgtagggactaatt-tcaaaattgcgtaaaatgtagggatcaaatacatatttaa 38110492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 1804322 - 1804233
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  1804322 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 1804233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 6476517 - 6476606
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  6476517 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 6476606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 3854498 - 3854586
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  3854498 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 3854586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 10708114 - 10708024
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||  | |||||| ||||||||||||||||||||||||    
T  10708114 gaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgtagggaccaaaaacatatttaac 10708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 12090126 - 12090214
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||||||    
T  12090126 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgcagggaccaaaaacatatttaac 12090214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 39096613 - 39096525
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||||||||||||    
T  39096613 aaaaatgtatggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcacaaaatatagggaccaaaaacatatttaac 39096525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 11450846 - 11450757
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  11450846 gaaaaatgtagggatttttaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 11450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 27378079 - 27378168
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  27378079 gaaaaatgtagggatttttaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 27378168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 26525895 - 26525983
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| |||||||||||||||||||||||||||||| || ||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  26525895 aaaattgtagggattttaaaaacatttattgaaatatagggact-attatcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 26525983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 10709567 - 10709476
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||  ||||||  ||  |||||||||||||||||||    
T  10709567 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaac 10709476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 39947084 - 39947175
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |  ||||| ||   ||||| ||||||||||||||||||||||||    
T  39947084 ggaaaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaac 39947175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 44934682 - 44934772
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   | |||| ||||||||||||||||||||||||    
T  44934682 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaac 44934772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 34037898 - 34037810
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||  ||| |||||||||| ||||||||    
T  34037898 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatatagagaccaaaaacgtatttaac 34037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 39945934 - 39945843
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |  ||||| ||   ||||| || |||||||||||||||||||||    
T  39945934 ggaaaaatataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaac 39945843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 24093412 - 24093330
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||| ||   ||||| ||||||| ||||||||||||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaac 24093330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 32861047 - 32861129
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||| ||   ||||| | ||||||||||||||||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaac 32861129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 23221924 - 23221835
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||| ||||||||||||||||||||||| | |||| |  ||||| |||||| ||| ||||||| ||| ||||||||||||    
T  23221924 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaac 23221835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 44930073 - 44929984
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |  | |||||     |||| ||||||||||||||||||||||||    
T  44930073 aaaaatgtagggattttaaaaatatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaac 44929984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 18107422 - 18107514
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| || |  | ||| ||  |||||| | |||||| |||||||||||||||    
T  18107422 aggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatatttaac 18107514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 23222864 - 23222952
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  ||||||||||||||| ||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||    
T  23222864 aaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaac 23222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 18105826 - 18105723
Alignment:
Q  284 actatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaa 383  Q
    ||||||||  |||||  |||||||||||||| ||||||||||| |||||||||||||| ||| || |  |||||||||   ||||  |||||||||||||    
T  18105826 actatttatgctaacagaggaaaaatgtaggaattttaaaaacctttattgaaatgtagggaatattcttcaaaatcgcataaaatttagggaccaaaaa 18105727  T
Q  384 cata 387  Q
    ||||    
T  18105726 cata 18105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 10710828 - 10710914
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 388  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||| |  ||||| ||  ||||||  || |||||||||||||||    
T  10710828 ggaaaaatgtaggaattttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacatat 10710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 2035697 - 2035609
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| ||||||| ||| || |  | ||||  | | ||||  |||||||||||||||||||||||    
T  2035697 aaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaac 2035609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 2191306 - 2191218
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  2191306 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 2191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 22704429 - 22704473
Alignment:
Q  349 attctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  22704429 attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 22704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||| ||||||||||| || |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 21182385 - 21182308
Alignment:
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||| |||||||||||||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 21182308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 22701945 - 22701982
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgta 341  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22701945 aaaaatgtagggattttaaaaacattcattgaaatgta 22701982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 2036604 - 2036692
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| |  | ||||  ||| |||| |||||||  || ||||||||||||    
T  2036604 aaaatatagggattttaaaaacattaattgaaatgtagggactattctttaaaaaggtgtaaaatgtagggattaataacatatttaac 2036692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 21217322 - 21217410
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  21217322 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21217410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 21265080 - 21264992
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  21265080 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21264992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 10711000 - 10711091
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||||| || | |||     | ||||  |||||||||||||||||||||||    
T  10711000 ggaaaaatgtaaggattttaaaaatatttactaaaatgtaaggactattttttaaagaaaagtaaaatatagggaccaaaaacatatttaac 10711091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 2517579 - 2517641
Alignment:
Q  327 atttattgaaatgtaaggactaattctcaa-aatcgtgcaaaacgtagggaccaaaaacatat 388  Q
    |||||||||||||||||||||| || |||| | || ||||||| ||| |||||||||||||||    
T  2517579 atttattgaaatgtaaggactatttttcaatagtcatgcaaaatgtatggaccaaaaacatat 2517641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 3624925 - 3625002
Alignment:
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| |||||| |  ||||| ||   ||||| ||| | ||| ||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaac 3625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 393
Target Start/End: Complemental strand, 7083736 - 7083696
Alignment:
Q  353 tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| || ||||||| ||||||||||||||||||||||||    
T  7083736 tcaaagtcatgcaaaatgtagggaccaaaaacatatttaac 7083696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 21217012 - 21216924
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||    
T  21217012 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 21216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 21265390 - 21265478
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||    
T  21265390 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 21265478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Original strand, 28898170 - 28898549
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28898170 aggccatcataacaagttcaacccaaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 28898269  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28898270 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 28898369  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28898370 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 28898469  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28898470 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 28898549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 1244391 - 1244012
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1244391 aggccatcataacaagttcaaccccaccccaccaaatgtccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 1244292  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1244291 cggcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 1244192  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1244191 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 1244092  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1244091 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 1244012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 18 - 393
Target Start/End: Complemental strand, 41298620 - 41298245
Alignment:
Q  18 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41298620 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggc 41298521  T
Q  118 ctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 217  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41298520 ttccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 41298421  T
Q  218 ctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggat 317  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  41298420 cttcgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttaacaacaaggactatttacactaactcaggaaaaatgtagggat 41298321  T
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41298320 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 41298245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 88 - 393
Target Start/End: Complemental strand, 884988 - 884683
Alignment:
Q  88 gctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctac 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  884988 gctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctac 884889  T
Q  188 gaagctgcggagaaagatcgtggtgaagttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggacta 287  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  884888 gaagctgcggagaaagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggacta 884789  T
Q  288 tttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  884788 tttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 884689  T
Q  388 tttaac 393  Q
    ||||||    
T  884688 tttaac 884683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 33848243 - 33847867
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33848243 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcactttcgacgataacatcatcgctttcg 33848144  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  33848143 gccttcaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaccggcgatccgcatctacaacgctgcggagaaagatcgtggtgaag 33848044  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||| | | ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||||  || ||||||||||||    
T  33848043 ttccccgccgtttttcggggagattgaacaaccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggagaaaaaatgtaggg 33847944  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| | ||||  |||||||||||||||||||||||    
T  33847943 attttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgtaaaatatagggaccaaaaacatatttaac 33847867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 29784078 - 29784467
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29784078 gccatcacaacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcgctttcaacgataacatcatcgctttcg 29784177  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggt---- 211  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||| || |||||||||||||||| |||||||||||||||||||||        
T  29784178 gcctccaaatcttcccctctaaaccaacatatttcaccggaagcatgacgaacaacggcgatccgcatctacgacgctgcggagaaagatcgtggtgaag 29784277  T
Q  212 --------gaagttctccgccg-ttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcag 302  Q
            |||||||||||||| |||||  | |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||  ||    
T  29784278 ttcataaggaagttctccgccgtttttctggtgagattgaaccgccaacattggcatcacgttagaaacttgacaacagagactatttacgctaacagag 29784377  T
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29784378 gaaaaatgtagggattttaaaaatatttattgaaatgtaaagact-attctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 29784467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 18443555 - 18443177
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18443555 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcg 18443456  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||  ||||| |  ||||||| |||||||||||||||||||||||||    
T  18443455 gcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacaccagcgatctgtgtctacgacgctgcggagaaagatcgtggtgaag 18443356  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| ||||||| ||||  ||||||||| | |||||||||||| |||||  | |||||||||||    
T  18443355 ctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacggatgaaaaatgtag 18443256  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  18443255 ggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 18443177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 22954189 - 22954402
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||   |||||||||||||||||||||||||||    
T  22954189 gccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatacccgcaacggcaaaaactttcaacgataacatcatcgctttcg 22954288  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||| |||||||||||||||||||||||||    
T  22954289 gcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgctgcggagaaagatcgtggtgaag 22954388  T
Q  216 ttctccgccgtttt 229  Q
    ||| ||||||||||    
T  22954389 ttccccgccgtttt 22954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 1244443 - 1244531
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  1244443 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 1244531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 18443597 - 18443697
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  18443597 cactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtaaggaccaaaaacatattta 18443695  T
Q  392 ac 393  Q
    ||    
T  18443696 ac 18443697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 28898118 - 28898030
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  28898118 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 28898030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 41298676 - 41298764
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  41298676 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 41298764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 29784024 - 29783936
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||  ||||| |||||||| |||||||||||||||    
T  29784024 aaaaatgtaggaattttaaaaacatttattgaaatatagggact-attctcaaaatcgcacaaaatgtagggactaaaaacatatttaac 29783936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 28838604 - 28838526
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||| ||||||||||| || || |||||||  ||||||| ||||||||||||||||||||||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaac 28838526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 33848296 - 33848385
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||| |||||||||| |||||    
T  33848296 gaaaaatgtaggaattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaacaaaaacataattaac 33848385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 22954138 - 22954047
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |   ||||  ||||||| |||||||||||||||    
T  22954138 aggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attctcaaaattgcataaaatatagggactaaaaacatatttaac 22954047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 20544145 - 20544227
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| |||||||| |  | ||| ||  ||||||| |||||||||||||||||||||||    
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaac 20544227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 30939563 - 30939653
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||| |  || |||| | | |||| |||||||| |||||||||||||||    
T  30939563 gaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaac 30939653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 20544321 - 20544398
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||  ||||||||  || |||| ||||||||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 49053719 - 49053796
Alignment:
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||| || ||||| || ||||| ||   ||||| ||| ||||||||||||||||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaac 49053796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 11974894 - 11974975
Alignment:
Q  308 atgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||| |||||||||||||||||||||||| || ||||| ||    || ||  |||||| ||||||||||||||||||||||||    
T  11974894 atgtaggaattttaaaaacatttattgaaatgcaaagactattt----aagtcacgcaaaatgtagggaccaaaaacatatttaac 11974975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 27310138 - 27310095
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggac 346  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  27310138 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggac 27310095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 10466695 - 10466635
Alignment:
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagg 374  Q
    ||||| ||||||||||||||||||||||||||||| || ||||| ||  |||||| |||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtagg 10466635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 27311048 - 27311092
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  27311048 aaaaatgtaggaattttaaaaacatttaatgaaatgtagggacta 27311092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 17075618 - 17075706
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||    
T  17075618 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 17075706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 32092317 - 32092229
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||| | |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  32092317 aaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaac 32092229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 359; Significance: 0; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 14 - 392
Target Start/End: Complemental strand, 33107309 - 33106931
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33107309 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 33107210  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33107209 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 33107110  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33107109 agttctccaccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 33107010  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33107009 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 15148095 - 15147719
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15148095 gccatcataaaaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcactttcaacgataacatcatcgctttcg 15147996  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||    
T  15147995 gcctcaaaatcttcccctctaaaccaacatatttcactggaaatctgacgaacaccggcgatccgcatctacgatgctgcggagaaagatcgtggtaaag 15147896  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  15147895 ttccccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 15147796  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||| | |||||| |||||| | |||| ||||||||||||||||||||||||    
T  15147795 attttaaaaacatttattgaaatgtaggga-ttattctctaaatcgcgtaaaatgtagggaccaaaaacatatttaac 15147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 20824541 - 20824165
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||    
T  20824541 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacacttttaacgataacatcatcgctttcg 20824442  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  20824441 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 20824342  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  20824341 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 20824242  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  20824241 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaac 20824165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 6162634 - 6162246
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  6162634 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcgctttcaacgataacatcatcactttcg 6162535  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaa- 214  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6162534 gcctccaaatctttccctctaaaccaacatatttcactggaagcgtgacgaacaccgacgatccgcatctacgacgctgcggagaaagatcgtggtgaag 6162435  T
Q  215 -----------gttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcagg 303  Q
               |||||| |||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||  |||    
T  6162434 ttcataaggaagttctctgccgttttccggcaagattaaaccgccaatattggcatcacgttagaaatttgacaacatggactatttacgctaacggagg 6162335  T
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  6162334 aaaaatgtagggattttaaaaacatttattgaaatgtaatgact-attctcaaaattgtgcaaaacgtagggacaaaaaacatatttaac 6162246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 14257524 - 14257148
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||   |||||||||||||||||||||||||||    
T  14257524 gccatcctgacaagttcaaccccaccccaccaaatctccaccacaacaccttccatacccgcaacggcaaaaactttcaacgataacatcatcgctttcg 14257425  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||  | |||||||||||||||| |||||||||||||||||||||||||    
T  14257424 gcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacaaacagtggcgatccgcatctacgacgctgcggagaaagatcgtggtgaag 14257325  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||  || ||||||||||||    
T  14257324 ttccccgccgtttttcggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggagaaaaaatgtaggg 14257225  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  14257224 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 14257148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 34984495 - 34984283
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34984495 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacacattccacacccgcaacaacaagtgttttcaacgataacatcatcgcttt 34984396  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  34984395 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcatggtga 34984296  T
Q  214 agttctccgccgt 226  Q
    |||||||||||||    
T  34984295 agttctccgccgt 34984283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 20227740 - 20227923
Alignment:
Q  30 ttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttc 129  Q
    ||||||| ||||||| |||||||||||||  ||| |||  |||||| ||||| |||||||||||||||| |||||||||||||| || ||||||||| ||    
T  20227740 ttcaaccacaccccatcaaatctccacca--acaacttttacacccacaacagcaagcgctttcaacgacaacatcatcgcttttggactccaaatcctc 20227837  T
Q  130 ccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||| |  |||| || ||||| |||||||||| ||||||||    
T  20227838 ccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagagaaagatcatggtgaag 20227923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 22121724 - 22121907
Alignment:
Q  30 ttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttc 129  Q
    ||||||| ||||||| |||||||||||||  ||| |||  |||||| ||||| |||||||||||||||| |||||||||||||| || ||||||||| ||    
T  22121724 ttcaaccacaccccatcaaatctccacca--acaacttttacacccacaacagcaagcgctttcaacgacaacatcatcgcttttggactccaaatcctc 22121821  T
Q  130 ccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||| |  |||| || ||||| |||||||||| ||||||||    
T  22121822 ccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagagaaagatcatggtgaag 22121907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 393
Target Start/End: Original strand, 20228187 - 20228323
Alignment:
Q  256 gcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctca 355  Q
    ||||| |||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||| | ||| |||||||    
T  20228187 gcatcccgttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaact-attctca 20228285  T
Q  356 aaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| ||| |||  | ||||||||| ||||||||||||    
T  20228286 aaattgtgaaaattgcagggaccaataacatatttaac 20228323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 393
Target Start/End: Original strand, 22122171 - 22122307
Alignment:
Q  256 gcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctca 355  Q
    ||||| |||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||| | ||| |||||||    
T  22122171 gcatcccgttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaact-attctca 22122269  T
Q  356 aaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| ||| |||  | ||||||||| ||||||||||||    
T  22122270 aaattgtgaaaattgcagggaccaataacatatttaac 22122307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 6162688 - 6162776
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  6162688 aaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 33107361 - 33107449
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  33107361 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 33107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 20824594 - 20824683
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  20824594 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 20824683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 34984545 - 34984632
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  34984545 aaaaatgtagg-attttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 34984632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 14257566 - 14257666
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  14257566 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 14257664  T
Q  392 ac 393  Q
    ||    
T  14257665 ac 14257666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 14712913 - 14712831
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |   |||||| ||||||||||||||||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaac 14712831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 15148146 - 15148237
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||| | | ||||  |||||||||||||||||||||||    
T  15148146 aggaaaaatgtagggattttaaaatcatttattgaaatgtagggact-attatcaaaattgcgtaaaatatagggaccaaaaacatatttaac 15148237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 20522157 - 20522244
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |  |||||||||| ||||| ||||| ||||||||||||||||||    
T  20522157 aaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaaatcgt-caaaatgtaggaaccaaaaacatatttaac 20522244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 8710341 - 8710429
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |  |||||   ||||||||  || |||| |||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 8710429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 8709601 - 8709677
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||       |||||| ||||||||||||||||||||||||    
T  8709601 tagggattttaaaaacagttattaaaatgtaaggactatttctca------cgcaaaatgtagggaccaaaaacatatttaac 8709677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 5974100 - 5974012
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||| |  |||||   ||||||||  || |||| |||||||||||||||    
T  5974100 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 5974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 19595650 - 19595738
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||| |  | ||||  |||||||| ||| |||| || ||||||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaac 19595738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 21113279 - 21113203
Alignment:
Q  317 ttttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| ||||||||||||| || ||||| || ||||| ||  |||||||||||||| |||| |||||||||||    
T  21113279 ttttaaaaatatttattgaaatgcaatgactatttttcaaagtcacgcaaaacgtagggatcaaagacatatttaac 21113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 20227146 - 20227059
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||| |||| |||||||||| |||||||||||| || | ||| ||||||||||||| ||||||  ||| || |||||| ||||||||    
T  20227146 aaaaatataggaattttaaaaatatttattgaaatataggaact-attctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 20227059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 22121130 - 22121043
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||| |||| |||||||||| |||||||||||| || | ||| ||||||||||||| ||||||  ||| || |||||| ||||||||    
T  22121130 aaaaatataggaattttaaaaatatttattgaaatataggaact-attctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 22121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 20521278 - 20521231
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||| |||||||||||||||||||||| ||||||| || ||||||    
T  20521278 aggaaaattgtagggattttaaaaacattttttgaaatatagggacta 20521231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 19579203 - 19579237
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatg 339  Q
    ||||| |||||||||||||||||||||||||||||    
T  19579203 aaaatatagggattttaaaaacatttattgaaatg 19579237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 7645994 - 7646071
Alignment:
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| ||||||||||||||||||||||||||| |  |||||   |  ||||| ||| |||| |||||||||||||||    
T  7645994 atttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 211530 - 211442
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  ||||||||||| |||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 356; Significance: 0; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 43979937 - 43979558
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43979937 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgtttt 43979838  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43979837 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 43979738  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43979737 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 43979638  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43979637 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaac 43979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 14 - 389
Target Start/End: Original strand, 12922783 - 12923158
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12922783 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 12922882  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12922883 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 12922982  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12922983 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 12923082  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12923083 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatgtagggaccaaaaacatatt 12923158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Original strand, 46262776 - 46263155
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46262776 aggccatcataacaagttcaaccccaccccaccaaatctccgccacaacaccttccacacccgcaacaacaagcactttcaacgataacatcatcgcttt 46262875  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  46262876 cggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagttcgtggtga 46262975  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46262976 agttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 46263075  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46263076 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 46263155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 30546094 - 30545714
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30546094 aggccatcataacaagttcaaccccaccccaccaaatctccacaacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 30545995  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  30545994 cgacctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcagagaaagatcgtggtga 30545895  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactc-aggaaaaatgta 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  30545894 agttctccaccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaaggaaaaatgta 30545795  T
Q  313 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30545794 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 30545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Original strand, 790036 - 790415
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  790036 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccacaacaacaagcgctttcaacgataacatcatcgcttt 790135  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  790136 cggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagttcgtggtga 790235  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  790236 agttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 790335  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  790336 gaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacttagggaccaaaaacatatttaac 790415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 1317440 - 1317061
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1317440 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaacttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 1317341  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1317340 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgaggaacaccggcgatccgcatctacgaagctgcggagaaagttcgtggtga 1317241  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1317240 agttcttcgccgttttccggcgagattgaaccgtcaacattggcatcacgttagaaatttgacaatatggactatttacactaactcaggaaaaatgtag 1317141  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1317140 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 1317061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 28957454 - 28957830
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  28957454 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 28957553  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  28957554 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 28957653  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  28957654 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 28957753  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  28957754 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 28957830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 40841839 - 40841463
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40841839 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcactttcaacgataacatcatcgctttcg 40841740  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||| |||||||||||||||||||| ||||    
T  40841739 gcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaacggcgatccgcatctacgacgctgcggagaaagatcgtggcgaag 40841640  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| | ||||||||||   |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||  || ||||||||||||    
T  40841639 ttccctgccgttttccgaggagattgaaccgccaacattggcatcacgttagaaacttgacaacagggactatttacgctaacggagaaaaaatgtaggg 40841540  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||||||||||    
T  40841539 attttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 40841463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 38025819 - 38026195
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  38025819 gccatcataacaagttcaaccccaccccaccaaatctccaccacatcaccttccacacctgcaacaacaagcactttcaacgataacatcatcgctttcg 38025918  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| || ||||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  38025919 gcctccaaatcttccccactaaaccaacatatttcactggaaatgtaacaaacaccggcgatctgcatctacgacactgcggagaaagatcgtggtgaag 38026018  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  38026019 ttccccgtcgttttcctgcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 38026118  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| | | |||| ||||| ||||||||||||||||||    
T  38026119 attttaaaaacatttattgaaatgtagggact-attctcaaaattgcgtaaaatgtaggaaccaaaaacatatttaac 38026195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 392
Target Start/End: Complemental strand, 55347938 - 55347563
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  55347938 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcactttcaacgataacatcatcgctttcg 55347839  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  55347838 gcctccaaatcttcccctctaaaccaagatatttcactagaaatgtgacgaacaccggcgatccgcatctacgaccctgcggagaaagatcgtggtgaag 55347739  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||   |||||||||||||||    
T  55347738 ttccccgccgtttttcggggagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaatggaggaaaaatgtaggg 55347639  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||| | | |||| |||||||||||||| ||||||||    
T  55347638 attttaaaaacatttattaaaatgtagggact-attctcaaaattgcgtaaaatgtagggaccaaaaatatatttaa 55347563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 31228022 - 31228398
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  31228022 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 31228121  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  31228122 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 31228221  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  31228222 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 31228321  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||| | |||| ||||||| ||||||||||||||||    
T  31228322 attttaaaaacatttattgaaatgtaggaact-attctcaaaatcgcgtaaaatgtagggatcaaaaacatatttaac 31228398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 28505587 - 28505210
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28505587 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcg 28505488  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||  ||||||| |||||||||||||||||||||||||    
T  28505487 gcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccgtgtctacgatgctgcggagaaagatcgtggtgaag 28505388  T
Q  216 ttct-ccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagg 314  Q
    || |   |  ||| |||  |||||||||||||||||||| ||||||| ||||  ||||||||| | |||||||||||| |||||  ||||||||||||||    
T  28505387 ttatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacggaggaaaaatgtagg 28505288  T
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  28505287 gattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 28505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 18 - 393
Target Start/End: Original strand, 2669152 - 2669526
Alignment:
Q  18 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggc 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||   ||||||||||||||||||||||||| |||    
T  2669152 catcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatactcgcaacggcaaaaactttcaacgataacatcatcgcttttggc 2669251  T
Q  118 ctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 217  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  | | |||||||| ||||| |||||||||||||||||||||||||||    
T  2669252 ctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcaatccgcatatacgacgctgcggagaaagatcgtggtgaagtt 2669351  T
Q  218 ctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggat 317  Q
    | ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||  || ||||||||||||||    
T  2669352 ccccgccgttttttggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacatggactatttacgctaacggagaaaaaatgtagggat 2669451  T
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  2669452 tttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 2669526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 21235407 - 21235029
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  21235407 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaatagcaagtgctttcaacgacaacatcatcactttcg 21235308  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||  ||||||||||||||||||||||||    
T  21235307 gccctcaaatcttcccctctaaaccaacatatttcactggaagcgtgacgaacaccgacgatctgtgtctacgatactgcggagaaagatcgtggtgaag 21235208  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| | ||||| ||||| ||||||||| | | ||||| |||| |||||  |||||||||||||    
T  21235207 ctcatagagaagttctccgccgagattgaaccgccaacatcgacatcaagttagtaatttgacagcagagactacttacgctaacggaggaaaaatgtag 21235108  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  21235107 ggattttaaaaacatttattgaaatgtaaggact-attatcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 21235029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 12108242 - 12108377
Alignment:
Q  257 catcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaa 356  Q
    |||| |||||||||||||||| |  |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12108242 catcccgttagaaatttgacagcaaggactatttacactaacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaa 12108340  T
Q  357 aatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||  ||||  |||||||||| ||||||||||||    
T  12108341 aatcgtataaaatttagggaccaataacatatttaac 12108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 12922731 - 12922643
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  12922731 aaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcgcaaaatgtagggaccaaaaacatatttaac 12922643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 43979989 - 43980077
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  43979989 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 43980077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 28957401 - 28957312
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  28957401 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 28957312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 31227969 - 31227880
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  31227969 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 31227880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 40841892 - 40841981
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||    
T  40841892 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaac 40841981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 789984 - 789896
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| | |||||| ||||||||||||||||||||||||    
T  789984 aaaaatgtagggattttaaaaacattcattgaaatgtatggact-attttcaaaattgcgcaaaatgtagggaccaaaaacatatttaac 789896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 21235449 - 21235548
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||  |||||||||||||    
T  21235449 cactaacggaggaaaaatgtagagattttaaaaacatttattgaaatgtagggact-attatcaaaatcgtgcaaaatgtaggga-gaaaaacatattta 21235546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 30546146 - 30546234
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| ||| |||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  30546146 aaaaatgtagggattttaaaaatattcattgaaatgtagagacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 30546234  T

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Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 47053852 - 47053762
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||| ||||||||||||    
T  47053852 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaac 47053762  T

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Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 2669108 - 2669008
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  || ||||||||||||||||||    
T  2669108 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatataaggaccaaaaacatattta 2669010  T
Q  392 ac 393  Q
    ||    
T  2669009 ac 2669008  T

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Target: chr4; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 10580122 - 10580041
Alignment:
Q  312 agggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||  |||||| ||| ||||||||||||||||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaac 10580041  T

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Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 38025777 - 38025677
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| | | |||| |||||||||||| |||||||||    
T  38025777 cactaacgaaggaaaaatgtagggattttaaaattttttattgaaatgtaaggact-attctcaaaattgcgtaaaatgtagggaccaaagacatattta 38025679  T
Q  392 ac 393  Q
    ||    
T  38025678 ac 38025677  T

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Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 47058507 - 47058596
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  | |||||   |||||| ||||||||||||||||||||||||    
T  47058507 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaac 47058596  T

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Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 1317494 - 1317580
Alignment:
Q  306 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||| ||||||||| |||||| ||||| ||||||||||||||||||    
T  1317494 aaatgtaggaattttaaaaacattcattgaaatgtagggact-attttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaac 1317580  T

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Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 1791389 - 1791464
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||||| |||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaac 1791464  T

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Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 55347970 - 55348051
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 387  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| || |||||||||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgttgggaccaaaaacata 55348051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 46262724 - 46262636
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||| || ||||||| | |||||| ||||||||||||||||||||||||    
T  46262724 aaaaatgtagaaattttaaaaacattcattgaaatgtagggactattt-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaac 46262636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 54167584 - 54167495
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |  | ||||||  |||||| ||||||||  ||||||||||||||    
T  54167584 aaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaac 54167495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 17288374 - 17288462
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |  ||||| | | |||||| |||||||| || ||||||||||||    
T  17288374 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaac 17288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 54142414 - 54142326
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |  ||||| ||| |||||| |||||||| || ||||||||||||    
T  54142414 aaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaac 54142326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 12107794 - 12107708
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||||||||||||| ||||||||||| ||||||| | | || |||||||||||| | |||| |||||||||||||||||||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgtaggtatta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 12107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 29691746 - 29691828
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||| ||||| || | ||| ||  |||||| ||| ||||||||||||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaac 29691828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 7118002 - 7118081
Alignment:
Q  313 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||| ||||||||| ||||||||| || ||||| ||| |||||| ||| ||||||||||||||||||||    
T  7118002 gggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgta-ggaccaaaaacatatttaac 7118081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 49426353 - 49426441
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||    
T  49426353 aaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaac 49426441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 54143502 - 54143590
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||||||||||||||||||| ||||||| |||||| |  ||||| ||||||||||  ||||||| || ||||||||||||    
T  54143502 aaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaac 54143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 5545018 - 5545100
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| |||||||||||||||||||||||||||| |||| || ||||| ||  |||||| ||||| | ||||||||||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaac 5545100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 17287576 - 17287488
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||| |||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| || ||||||||||||    
T  17287576 aaaatgtaggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaac 17287488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 7164989 - 7165079
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattga-aatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| || ||||||||||||||||| || |||||||||| || ||||||||   | |||||| |||| |||||||||||||||||||    
T  7164989 aaaaatgtgggaattttaaaaacatttatcgacaatgtaaggattatttctcaaagaagggcaaaatgtagagaccaaaaacatatttaac 7165079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 48554145 - 48554071
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||| |||||||| |||||||||||||| |  ||||| ||  |||||| |||||||||||||||||||||||    
T  48554145 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 28505638 - 28505686
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaa 349  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  28505638 aggaaaaatatagggattttaaaaacatttattaaaatgtagggactaa 28505686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 49424543 - 49424455
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |  ||||| | | ||||||  ||||||  ||||| |||||||||    
T  49424543 aaaatgtagggattttaaaaacatttattgatatgtaaagactattattcaaagtagcgcaaaatatagggataaaaaatatatttaac 49424455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 26168245 - 26168166
Alignment:
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| |||||||| ||   ||| |   |||||| ||||||| ||||||||||||||||    
T  26168245 ggattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaac 26168166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 3296793 - 3296719
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||| |||||||||||||| |  ||||| ||  |||||| ||||||| |||||| ||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaatatatttaa 3296719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 35166708 - 35166782
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||| |||||||||||||| |  ||||| ||||  |||| |||||||| ||| ||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcgtataaaatgtagggacgaaagacatatttaa 35166782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 54168823 - 54168912
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| || |  ||||| ||  ||||||  ||||||  |||||||||||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaac 54168912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 51906668 - 51906595
Alignment:
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||| |||||||| |||||||||||||| |  ||||| ||  |||||  |||||||||||||||||||||||    
T  51906668 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaat-gtagggaccaaaaacatatttaa 51906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 51906677 - 51906735
Alignment:
Q  335 aaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||| |  ||||| || ||||||| ||||||||||||| ||||||||||    
T  51906677 aaatgtaaggactattcttcaaagtcatgcaaaatgtagggaccaaaatcatatttaac 51906735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 5545011 - 5544958
Alignment:
Q  340 taaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| |  ||||| || ||||||| ||||||||||||||||||||||||    
T  5545011 taaggactattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaac 5544958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 7118176 - 7118253
Alignment:
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 7118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 29691614 - 29691526
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg-tgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| ||||| |||||  |||| | |||||||  || |||| |||||||||||||||    
T  29691614 aaaatgtgaggattttaaaaacatttaatgaaatgtagggact-attcttcaaatggatgcaaaatataaggactaaaaacatatttaac 29691526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 3296632 - 3296544
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||||||||| ||| || |  |||||   | |||||| ||| |||| |||||||||||||||    
T  3296632 aaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 34129301 - 34129389
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||| ||||| ||||||||| |||||| |  ||||| | |||||||| ||| || |  ||||||||||||||    
T  34129301 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaaacatatttaac 34129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 35468919 - 35468887
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaag 343  Q
    ||||||||||| |||||||||||||||||||||    
T  35468919 tagggattttagaaacatttattgaaatgtaag 35468887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 51906820 - 51906908
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| ||| ||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||    
T  51906820 aaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaac 51906908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 356; Significance: 0; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 30428053 - 30427674
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30428053 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 30427954  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30427953 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 30427854  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30427853 agttctccgccgtttcccggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 30427754  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30427753 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 30427674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 45230509 - 45230130
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45230509 aggccatcataacaagttcaacccaaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 45230410  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45230409 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 45230310  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45230309 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 45230210  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45230209 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaacgtagggaccaaaaacatatttaac 45230130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Original strand, 17968178 - 17968557
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17968178 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgtaacaacaagcgctttcaacgataacatcatcgcttt 17968277  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17968278 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 17968377  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  17968378 agttctccgccgttttccggcgagattgaaccgtcaacattgacatcacgttagaaatttgacaacagggattatttacgctaactcaggaaaaatgtag 17968477  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17968478 ggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatatttaac 17968557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 46802699 - 46802323
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  46802699 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcactttcaacgataacatcatcgctttcg 46802600  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||  |||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||| | |||||||||||| ||||||||||    
T  46802599 gcctccaaatcttcatctctaaaccaacatatttcagtggaaatgtgacgaaaaccggcgatccgcatctacgacgatgcggagaaagaccgtggtgaag 46802500  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||  |||||||||||||||    
T  46802499 ttccccgccattttccggcgagattgaaccgccaacattggcatcacgttaaaaatttgacaacagggactatttacgctaacagaggaaaaatgtaggg 46802400  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||| | |||| || |||||||||||||||||||||    
T  46802399 attttaaaaacttttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtggggaccaaaaacatatttaac 46802323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 393
Target Start/End: Original strand, 47410568 - 47410942
Alignment:
Q  18 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggc 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||   |||||||||||||||||||||||||||||    
T  47410568 catcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatacccgcaacggcaaaaactttcaacgataacatcatcgctttcggc 47410667  T
Q  118 ctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 217  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||    
T  47410668 ctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgttgcggagaaagatcgtggtgaagtt 47410767  T
Q  218 ctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggat 317  Q
    | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  || ||||||||||||||    
T  47410768 ccccgccgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggagaaaaaatgtagggat 47410867  T
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  47410868 tttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 47410942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 32266860 - 32266484
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||    
T  32266860 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacctgcaacagcaaacactttcaacgataacatcatcgctttcg 32266761  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||| | |||||||||||| ||||||||||    
T  32266760 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 32266661  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||| |||||  |||||||||||||||    
T  32266660 ttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacaaggactatttacgctaacggaggaaaaatgtaggg 32266561  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  32266560 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 32266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 40124453 - 40124077
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  40124453 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacaataacatcatcgctttcg 40124354  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||| | |||||||||||| ||||||||||    
T  40124353 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatctgcatctacgacgttgcggagaaagaccgtggtgaag 40124254  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  40124253 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 40124154  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||  | |||| ||| ||||||||||||||||||||    
T  40124153 attttaaaaacatttattgaaatgtagggact-attctcaaaatcaagtaaaatgtaaggaccaaaaacatatttaac 40124077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 9123062 - 9122686
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||   ||||||||||||||||||||||||| |    
T  9123062 gccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatacccgcaacggcaaaaactttcaacgataacatcatcgcttttg 9122963  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||| ||||||||| ||||  |||||||||||||||||||    
T  9122962 gcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccacatctacgacgctgtagagaaagatcgtggtgaag 9122863  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||  || ||||||||||||    
T  9122862 ttccccgtcgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagtgactatttacgctaacggagaaaaaatgtaggg 9122763  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | |||| || |||||||||||||||||||||    
T  9122762 attttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcgtaaaatgtggggaccaaaaacatatttaac 9122686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 17968126 - 17968038
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  17968126 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 17968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 32266913 - 32267002
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  32266913 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 32267002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 30428105 - 30428193
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| | |||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  30428105 aaaaatgtagggattttaaaaacattcattgaaatgtaggaacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 30428193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 45230561 - 45230649
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  45230561 aaaaatatagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 45230649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 40124506 - 40124595
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| |||||||||||||| |||||||||    
T  40124506 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaatatatttaac 40124595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 46802741 - 46802841
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||| ||  |||| ||||||||||||||||||||||    
T  46802741 cactaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attttcaaaattgtataaaatgtagggaccaaaaacatattta 46802839  T
Q  392 ac 393  Q
    ||    
T  46802840 ac 46802841  T

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Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 47410524 - 47410424
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  47410524 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 47410426  T
Q  392 ac 393  Q
    ||    
T  47410425 ac 47410424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 9123113 - 9123204
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |   |||| ||||||||||||||||||||||||    
T  9123113 aggaaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaattgcataaaatgtagggaccaaaaacatatttaac 9123204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 3591171 - 3591253
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||  ||| || ||||||||||||||||||||||||    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaac 3591253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 8997432 - 8997341
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggac-caaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||  |||||||  |||||||||||||||    
T  8997432 ggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcacaaaatatagggacaaaaaaacatatttaac 8997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 1500980 - 1501070
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |  ||||||  | ||||||  ||||||| |||||||||||||||    
T  1500980 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaac 1501070  T

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Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 8998193 - 8998264
Alignment:
Q  262 cgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttatt 333  Q
    |||||||||||||||| | | |||||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  8998193 cgttagaaatttgacagcagagactatttacgctaacgaaggaaaactgtagggattttaaaaacatttatt 8998264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 19895656 - 19895574
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| || ||||| || ||||| ||  ||||||  ||| |||||||||||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaac 19895574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 36793574 - 36793663
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| |  ||||| ||  ||||||  ||||||| |||||||||||||||    
T  36793574 aaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaac 36793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 37717797 - 37717884
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| ||| ||||||||||||| |||||||||||||||||||| ||| ||||| | | | |||| |||||||| |||||||||||||||    
T  37717797 aaaaagtaaggattttaaaaacctttattgaaatgtaaggact-attttcaaagttgcgtaaaatgtagggactaaaaacatatttaac 37717884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 50359290 - 50359356
Alignment:
Q  327 atttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| || ||||| ||  ||| || ||||||||||||||||||||||||    
T  50359290 atttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaac 50359356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 5683413 - 5683335
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||| |||||| | || ||||| ||  |||||| |||| |||||| || |||||||||    
T  5683413 gattttaaaaacatttattgaaatgcaaggacaatttttcaaattcacgcaaaatgtagagaccaataatatatttaac 5683335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 18180131 - 18180053
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| ||||||||||||| |||||||  || ||||| ||  |||||| |||| ||| |||||||||||||||    
T  18180131 gattttaaaaatatttattgaaatgcaaggactgtttttcaaagtcacgcaaaatgtagtgactaaaaacatatttaac 18180053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 45664777 - 45664688
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| ||||||||||||||||||||| |||||||  ||||| |  |||||   | | |||| |||||||| |||||||||||||||    
T  45664777 aaaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggactaaaaacatatttaac 45664688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 12869663 - 12869743
Alignment:
Q  313 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| |||||| |  | |||   | | ||||  |||||||||||||||||||||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaac 12869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 18179968 - 18179880
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||| ||| |||||| ||||||||| || |||||   |||||||| ||| |||| |||||||| ||||||    
T  18179968 aaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggactaaaaacatgtttaac 18179880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 31889519 - 31889435
Alignment:
Q  309 tgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||| |||||||||||||| ||||| ||  ||||| || ||||||| | || ||  || ||||||||||||    
T  31889519 tgtagggattttaaaaacgtttattgaaatgtagggactgatattcaaagtcttgcaaaatgcagagatgaataacatatttaac 31889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 12868521 - 12868486
Alignment:
Q  306 aaatgtagggattttaaaaacatttattgaaatgta 341  Q
    |||||||||||||||||||| |||||||||||||||    
T  12868521 aaatgtagggattttaaaaatatttattgaaatgta 12868486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 1500150 - 1500105
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||    
T  1500150 gaaaaatatagggattttaaaaacattcaatgaaatgtagggacta 1500105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 36792329 - 36792241
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||| ||||||||||||||||| || ||| || |  | ||||||  |||||| ||||| ||  ||||||||||||||    
T  36792329 aaaaatgtagggatttt-aaaacatttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaac 36792241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 5172834 - 5172798
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgta 341  Q
    |||||||| |||||||||||||||||| |||||||||    
T  5172834 aaaatgtaaggattttaaaaacatttaatgaaatgta 5172798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 16 - 391
Target Start/End: Original strand, 12734316 - 12734691
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12734316 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 12734415  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  12734416 gcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcagagaaagatcgtggtgaag 12734515  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12734516 ttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacagcagggactatttacactaactcaggaaaaatgtaggg 12734615  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12734616 attttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 393
Target Start/End: Original strand, 29917249 - 29917626
Alignment:
Q  17 ccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29917249 ccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcgg 29917348  T
Q  117 cctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagt 216  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||  ||||||| |||| ||||||||||||||||||||     
T  29917349 cctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccgtgtctacgacgctgaggagaaagatcgtggtgaagc 29917448  T
Q  217 tc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagg 314  Q
    ||     |  ||| |||  ||||||||||||||||||||  |||||| ||||  ||||||||| |  ||||||||||| |||||  || |||||||||||    
T  29917449 tcatagagaagttctccgccgagattgaaccgccaacatcagcatcaagttaataatttgacagcaaggactatttacgctaacggagaaaaaatgtagg 29917548  T
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  29917549 gattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 29917626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 38 - 215
Target Start/End: Original strand, 42253302 - 42253479
Alignment:
Q  38 caccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaa 137  Q
    ||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  42253302 caccccaccaaatctccaccacaacaccttctacaccagcagcagcaagcgctttcaacgacagcatcatcgctttcggcctccaaatcttcccctctaa 42253401  T
Q  138 accaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||| |||| || ||||| || || || |||| |||||||  ||||||| |||| ||||||||||||||||||||    
T  42253402 accaacagatttaaccggaagcgtcacaaataccggcgatccgagtctacgacgctgtggagaaagatcgtggtgaag 42253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 29917194 - 29917106
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  29917194 aaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaacgtagggatcaaaaacatatttaac 29917106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 12734262 - 12734174
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  12734262 aaaaatgtagggattttaaaaatattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 12734174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 24846055 - 24845964
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||||| |||||||    
T  24846055 aggaaaaatataggaattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtgcaaaatgtagagactaaaaacagatttaac 24845964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 21005956 - 21006038
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| || |||||  |  |||||| ||||||||||||||||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaac 21006038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 4624623 - 4624534
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| || |||||||  || ||||||||||||||||||||    
T  4624623 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaac 4624534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 4624484 - 4624361
Alignment:
Q  270 atttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaac 369  Q
    |||||||| | ||||||||||   |||||  |||||||||||||||||||||||||||||||||||||||||| ||| | || |||||   | | ||||     
T  4624484 atttgacagcagggactatttgtgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagacgatttgtcaaaggagggaaaaat 4624385  T
Q  370 gtagggaccaaaaacatatttaac 393  Q
    ||||| ||||||||||||||||||    
T  4624384 gtaggcaccaaaaacatatttaac 4624361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 44024481 - 44024399
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||| ||  |||||| ||| ||||||||||||||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaac 44024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 392
Target Start/End: Complemental strand, 10047734 - 10047653
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||||||||||||||||| ||||||| |||||||| || ||| |||| ||||||| |||| ||||||||||||||||||    
T  10047734 tagggattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaa 10047653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 6297718 - 6297636
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||| ||  |||||| |||  ||| |||||||||||||||    
T  6297718 tagggattttaaaaacatttattgaaatgtaaaaactaattttcaaagtcacgcaaaatgtacagacaaaaaacatatttaac 6297636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 20682924 - 20683013
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| | ||||||||||||||||||| |||||||||||| | |  | ||||||| || ||| ||||||||||| ||||||||||||    
T  20682924 aaaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctttaaaatcgcgctaaatgtagggaccaataacatatttaac 20683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 36155361 - 36155272
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||| |  ||||| |||  ||||| ||||||||||| | ||||||||||    
T  36155361 aaaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaac 36155272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 4694434 - 4694521
Alignment:
Q  306 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| | ||||||| |||||| || ||||||  | | ||||  ||||||| |||||||||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatttatcaaaagagcgtaaaatatagggactaaaaacatatttaac 4694521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 6297863 - 6297945
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 387  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  ||||| ||  |||||| |||||||| |||||||||    
T  6297863 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 11089133 - 11089211
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||| |||| || ||||| ||    |||| ||| ||||||||||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaac 11089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 26720411 - 26720323
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||| |  |||||   | |||||| |||||||| ||||| ||||||||    
T  26720411 aaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 20682787 - 20682709
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||| |||||||||||||| |  ||||| ||| || |||  |||||||||| || |||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaagtcgcgctaaatatagggaccaataagatatttaac 20682709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 44148667 - 44148578
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||  ||||||||||||| |||||| ||||||| |||||| |  ||||||  | | |||| |||||||| |||||||||||||||    
T  44148667 aaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 16682621 - 16682533
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||||| | ||||||||||||||| ||||||||||| ||||| |  | ||| ||| ||||||  ||  ||||||||||||||||||    
T  16682621 aaaaatgtaagaattttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaa 16682533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 40304773 - 40304685
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||| ||||| | ||||||| |||||| || |||||   |||||||| |||||||| ||||| |||||||||    
T  40304773 aaaatgtgaggattttaaaaatatttacttaaatgtatggactatttatcaaaggagtgcaaaatgtagggactaaaaatatatttaac 40304685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 6298036 - 6298079
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    |||||||  |||||||||||||||||| ||||||||||||||||    
T  6298036 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggacta 6298079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 36156359 - 36156402
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    |||||||| |||||||||||||||||||||||||| || |||||    
T  36156359 aaaatgtaaggattttaaaaacatttattgaaatgcaaagacta 36156402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 391
Target Start/End: Original strand, 12734706 - 12734736
Alignment:
Q  361 gtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||||||||||||||||||||||||||    
T  12734706 gtgcaaaacgtagggaccaaaaacatattta 12734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 22601587 - 22601534
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaat 359  Q
    |||||||| | |||||||||||||||||| ||||||| ||||| |||||||||||    
T  22601587 aaaatgtaagaattttaaaaacatttatttaaatgtagggact-attctcaaaat 22601534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 45369134 - 45369163
Alignment:
Q  316 attttaaaaacatttattgaaatgtaagga 345  Q
    ||||||||||||||||||||||||||||||    
T  45369134 attttaaaaacatttattgaaatgtaagga 45369163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 9800344 - 9800432
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||||||||||||||||| |||||| || |||||| |  |||||   | |||||| | | |||||||||| |||||||||    
T  9800344 aaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 348; Significance: 0; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 6 - 393
Target Start/End: Complemental strand, 3879160 - 3878773
Alignment:
Q  6 tgaagcataggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3879160 tgaaacataggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatc 3879061  T
Q  106 atcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagat 205  Q
    ||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  3879060 atcactttcagcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgatgaacaccggcgatccgcatctacgaagctgcggagaaagat 3878961  T
Q  206 cgtggtgaagttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaa 305  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3878960 cgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaa 3878861  T
Q  306 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3878860 aaatatagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 3878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 31093375 - 31092996
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31093375 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 31093276  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  31093275 cggccttcaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagttcgtggtga 31093176  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  31093175 agttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaagaaaaatgtag 31093076  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31093075 ggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcgtgcaaaacgttgggaccaaaaacatatttaac 31092996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 18 - 393
Target Start/End: Complemental strand, 21949775 - 21949401
Alignment:
Q  18 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  21949775 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcactttcaacgataacatcatcgctttcgac 21949676  T
Q  118 ctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 217  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||    
T  21949675 ctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacagcggcgattcgcatctacgacgctgcggagaaagatcgtggtgaagtt 21949576  T
Q  218 ctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggat 317  Q
    | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||    
T  21949575 ccccgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtagggat 21949476  T
Q  318 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  21949475 tttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 21949401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 28641304 - 28641680
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  28641304 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaaacactttcaacgataacatcatcgctttcg 28641403  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  28641404 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 28641503  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  28641504 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacattagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 28641603  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| |||||||||||| |||||||||||    
T  28641604 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaacacatatttaac 28641680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 31162798 - 31162422
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  31162798 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 31162699  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| | |||||||||||| ||||||||||    
T  31162698 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccgacgatctgcatctacgacgttgcggagaaagaccgtggtgaag 31162599  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  31162598 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 31162499  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||  | |||| ||||||||||||||||||||||||    
T  31162498 attttaaaaacatttattgaaatgtagggact-attctcaaaatcacgtaaaatgtagggaccaaaaacatatttaac 31162422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 5746904 - 5747280
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  5746904 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 5747003  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||| | |||||||||||| ||||||||||    
T  5747004 gcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 5747103  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||| |||||  |||||||||||||||    
T  5747104 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgataacagggactatttacgctaacggaggaaaaatgtaggg 5747203  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  5747204 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 5747280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 6543792 - 6543416
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  6543792 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 6543693  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||| | |||||||||||| ||||||||||    
T  6543692 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatccgcatctacgacgttgcggagaaagaccgtggtgaag 6543593  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||| |||||  |||||||||||||||    
T  6543592 ttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacaaggactatttacgctaacggaggaaaaatgtaggg 6543493  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  6543492 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 6543416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 3192177 - 3191799
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3192177 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcg 3192078  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||| ||||||   ||||||| |||||| |||||||| ||||| |||    
T  3192077 gcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacaaacaccggcgatccatgtctacgacgctgcgaagaaagattgtggtaaag 3191978  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| ||||||| ||||  ||||||||| | |||||||||||| |||||  |||||||||||||    
T  3191977 ctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacggaggaaaaatgtag 3191878  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  3191877 ggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggactaaaaacatatttaac 3191799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 39402355 - 39402733
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  39402355 gccatcataacaagttcaaccccaccccatcaaatctccaccacaaaaccttccacacccacaacagcaagcgctttcaacgacaacatcatcgctttcg 39402454  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||  |||||||   ||| |||||||||||||||||||    
T  39402455 gcctccaaatcttcccctctaaaccaacatatttcaccgaaagcgtgacgaacaccgacgatccgtgtctacgacattgcagagaaagatcgtggtgaag 39402554  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| ||||||| ||||| ||||||||| | |||||||||||| ||| |  |||||||||||||    
T  39402555 ctcatagtgaagttctccgccgagattgaaccgccaacatcggcatcaagttagtaatttgacagcagggactatttacgctaccggaggaaaaatgtag 39402654  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  39402655 ggattttaaaaatatttattgaaatgtaaggact-attctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaac 39402733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 39402313 - 39402213
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  39402313 cactaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatattta 39402215  T
Q  392 ac 393  Q
    ||    
T  39402214 ac 39402213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 31162851 - 31162940
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  31162851 gaaaaatgtagggattttaaaaacatttattgaaatgtaagga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 31162940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 3192231 - 3192319
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||||||||||||    
T  3192231 aaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcacaaaatatagggaccaaaaacatatttaac 3192319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 28641251 - 28641162
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  28641251 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 28641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 31093427 - 31093515
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  31093427 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 31093515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 119103 - 119011
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |||   | |||||| ||||||||||||||||||||||||    
T  119103 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatttattaaaggagggcaaaatgtagggaccaaaaacatatttaac 119011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 119955 - 120047
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||   | |||||| ||||||||||||||||||||||||    
T  119955 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaac 120047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 5746851 - 5746762
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  5746851 gaaaaatgtagggatttttaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 5746762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 21949830 - 21949919
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||    
T  21949830 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaac 21949919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 19352423 - 19352300
Alignment:
Q  270 atttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaac 369  Q
    |||||||| | ||||||||||   |||||  |||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||  | | ||||     
T  19352423 atttgacagcagggactatttgtgctaacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaat 19352324  T
Q  370 gtagggaccaaaaacatatttaac 393  Q
    ||||| ||||||||||||||||||    
T  19352323 gtaggaaccaaaaacatatttaac 19352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 6543845 - 6543933
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||| ||||||||||||||||||||    
T  6543845 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgta-ggaccaaaaacatatttaac 6543933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 718224 - 718313
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |  |||||||  ||||||| ||||| ||||||||||||||||||    
T  718224 aaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaac 718313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 3879204 - 3879292
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| || |||||||||||| |||||| |||||||||||||| |||||||||    
T  3879204 aaaaatatagggattttaaaaacattcattgaaatgtagggatta-ttctcaaaatcgcgcaaaatgtagggaccaaaaatatatttaac 3879292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 14626089 - 14626178
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || | ||| ||| |||||   |||||||||||||||||||||||    
T  14626089 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatatttaac 14626178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 393
Target Start/End: Complemental strand, 14625252 - 14625123
Alignment:
Q  263 gttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgt 362  Q
    |||||||| |||||| ||| |||||||||   ||||  ||||||||||||||||||||||||||||||||| |||| || ||||||  | | ||||| |     
T  14625252 gttagaaaattgacaccggagactatttatgataacggaggaaaaatgtagggattttaaaaacatttattaaaatttatggactatattt-aaaattgc 14625154  T
Q  363 gcaaaacgtagggaccaaaaacatatttaac 393  Q
    | |||| ||||||||||||||||||||||||    
T  14625153 gtaaaatgtagggaccaaaaacatatttaac 14625123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 119272 - 119185
Alignment:
Q  306 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  | ||| ||  ||||||  || ||||||||||||||||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaac 119185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 19353067 - 19353158
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||| ||   |||||  || ||||||||||||||||||||    
T  19353067 ggaaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaac 19353158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 4186844 - 4186755
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||| ||||||||||||||||||||||| | |||| |  ||||| |||||| ||| ||||||| ||| ||||||||||||    
T  4186844 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaac 4186755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 19353235 - 19353327
Alignment:
Q  301 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||     ||||||  ||||||||||||| |||||||||    
T  19353235 aggaaaaatgtatggattttaaaaacgtttattgaaatgtaaggactatttatcaaatgatggcaaaatatagggaccaaaaatatatttaac 19353327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 119786 - 119868
Alignment:
Q  306 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 388  Q
    |||||||||||||||||||||||||||||||||| |||||||| |  ||||| ||  ||||||  || |||||||||||||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 3406692 - 3406774
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||| || | ||| ||  |||||| || || || |||||||||||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactatttttaaaagtcacgcaaaatgtcggaacgaaaaacatatttaac 3406774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 19352562 - 19352517
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19352562 gaaaaatgtagggattttaaaaacatttattgaaatgcaaggacta 19352517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 4187837 - 4187925
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||    
T  4187837 aaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaac 4187925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 18999446 - 18999367
Alignment:
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||| ||||||||| |||||| |  ||||||  |||||||| ||| |||| |||||||||||||||    
T  18999446 ggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaac 18999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 8647358 - 8647394
Alignment:
Q  312 agggattttaaaaacatttattgaaatgtaaggacta 348  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8647358 agggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 18999641 - 18999729
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||| ||||| ||||||||| |||||| |  |||||||   |||||| ||| |||| |||||||||||||||    
T  18999641 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaac 18999729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 30351704 - 30351748
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||    
T  30351704 aaaaatgtaggaattttaaaaatatttattgaaatgtagggacta 30351748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 37813467 - 37813376
Alignment:
Q  302 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||| |||||||||||| ||| ||||||||| |||||| |  ||||||| | | |||  |||||||| ||||| |||||||||    
T  37813467 ggaaaaatttaggaattttaaaaacacttaatgaaatgtatggactattcttcaaaatggcgtaaactgtagggactaaaaatatatttaac 37813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 18340661 - 18340694
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||||||||||||| ||||||||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggacta 18340694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 87137 - 87177
Alignment:
Q  353 tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| || ||||||| ||||||||||||||||||||||||    
T  87137 tcaaagtcatgcaaaatgtagggaccaaaaacatatttaac 87177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 30350691 - 30350647
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||||    
T  30350691 aaaaatataggaattttaaaaatatttattgaaatgtagggacta 30350647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 31176758 - 31176682
Alignment:
Q  317 ttttaaaaacattta-ttgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||||||||||  || |||||||||||||| |  ||||| ||  || ||| |||||||||||||||||||||||    
T  31176758 ttttaaaaacattttcttaaaatgtaaggactattcttcaaagtcacgcgaaatgtagggaccaaaaacatatttaa 31176682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Complemental strand, 22407222 - 22406843
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22407222 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 22407123  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  22407122 cggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagttcgtggtga 22407023  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22407022 agttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 22406923  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22406922 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaac 22406843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 14 - 393
Target Start/End: Original strand, 34949897 - 34950276
Alignment:
Q  14 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34949897 aggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgcttt 34949996  T
Q  114 cggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34949997 cggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtga 34950096  T
Q  214 agttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34950097 agttctccgccgttttccggggagattggaccgccaacattggcatcatgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtag 34950196  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34950197 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaac 34950276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 52 - 393
Target Start/End: Original strand, 27475477 - 27475818
Alignment:
Q  52 tccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttca 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27475477 tccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaatcaacatatttca 27475576  T
Q  152 ctggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagttctccgccgttttcccgcgagattgaaccgccaac 251  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27475577 ccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaac 27475676  T
Q  252 attggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaatt 351  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27475677 attggcatcacgttagaaatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatataaggactaatt 27475776  T
Q  352 ctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  27475777 ctcaaaatcgtgtaaaacttagggaccaaaaacatatttaac 27475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 45539352 - 45539728
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  45539352 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaagcactttcaacgataacatcattgctttcg 45539451  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  45539452 gcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaacggcgatccgcatctacgacgctgcggagaaagatcgtggtgaag 45539551  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  || ||||||||||||    
T  45539552 ttccctgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggagaaaaaatgtaggg 45539651  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||||||||||    
T  45539652 attttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 45539728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 17 - 393
Target Start/End: Complemental strand, 42606656 - 42606281
Alignment:
Q  17 ccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcgg 116  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||  |||   ||||||||||||||||||||||||||||    
T  42606656 ccatcctaacaagttcaacctcaccccaccaaatctccaccacaacaccttccatacctgcaacggcaaaaactttcaacgataacatcatcgctttcgg 42606557  T
Q  117 cctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaagt 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||    
T  42606556 cctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagt 42606457  T
Q  217 tctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggga 316  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  || |||||||||||||    
T  42606456 tccccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacggagaaaaaatgtaggga 42606357  T
Q  317 ttttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| | |||| |||||||||||||||| |||||||    
T  42606356 ttttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacaaatttaac 42606281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 36899631 - 36899255
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||   |||||||||||||||||||||||||||    
T  36899631 gccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatactcgcaacggcaaaaactttcaacgataacatcatcgctttcg 36899532  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |  ||||||||||||||| |||| |||||||||||||||||||     
T  36899531 gcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggtgatccgcatctacgacgctgaggagaaagatcgtggtgaaa 36899432  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || ||||||||||||    
T  36899431 ttctccgccgtttttcggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacactaacggagaaaaaatgtaggg 36899332  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  36899331 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 36899255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 390
Target Start/End: Complemental strand, 2389009 - 2388636
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||   |||||||||||||||||||||||||||    
T  2389009 gccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccatacccgcaacggcaaaaactttcaacgataacatcatcgctttcg 2388910  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||   | |||||||||||||||| |||||||||||||||||||||||||    
T  2388909 gcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacggtggcgatccgcatctacgacgctgcggagaaagatcgtggtgaag 2388810  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||  || ||||||||||||    
T  2388809 ttccccgccgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttaagctaacggagaaaaaatgtaggg 2388710  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattt 390  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| | |||| |||||||||||||||||||||    
T  2388709 attttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatattt 2388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 46690059 - 46689683
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  46690059 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaaacacttttaacgataacatcatcgctttcg 46689960  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
     |||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||   |||||||||||| ||||||||||    
T  46689959 acctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacattgcggagaaagaccgtggtgaag 46689860  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  46689859 ttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaggg 46689760  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||   |||| ||||| ||||||||||||||||||    
T  46689759 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcataaaatgtaggaaccaaaaacatatttaac 46689683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 4199832 - 4199454
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4199832 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcg 4199733  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||  ||||| |  ||||||| |||||||||||||||||||||||||    
T  4199732 gcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacaccagcgatctgtgtctacgacgctgcggagaaagatcgtggtgaag 4199633  T
Q  216 ttc--tccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtag 313  Q
     ||     |  ||| |||  |||||||||||||||||||| ||||||| ||||  ||||||||| | |||||||||||| |||||  | |||||||||||    
T  4199632 ctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacggatgaaaaatgtag 4199533  T
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4199532 ggattttaaaaacatttattgaaatataaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaac 4199454  T

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Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 4199874 - 4199974
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  4199874 cactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatattta 4199972  T
Q  392 ac 393  Q
    ||    
T  4199973 ac 4199974  T

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Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 34949845 - 34949757
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  34949845 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 34949757  T

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Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 46690112 - 46690201
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||    
T  46690112 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 46690201  T

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Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 27475475 - 27475391
Alignment:
Q  308 atgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 27475391  T

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Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 45539299 - 45539210
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||    
T  45539299 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaac 45539210  T

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Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 22407274 - 22407362
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| | |||||| ||||||||||||||||||||||||    
T  22407274 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attttcaaaattgcgcaaaatgtagggaccaaaaacatatttaac 22407362  T

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Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 42606699 - 42606799
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| |   |||| ||||||||||||||||||||||    
T  42606699 cactaacgaaggaaaaatgtagggattttaaaaatatttattgaaatgtagggact-attctcaaaattgcataaaatgtagggaccaaaaacatattta 42606797  T
Q  392 ac 393  Q
    ||    
T  42606798 ac 42606799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 20826819 - 20826729
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   | |||| ||||||||||||||||||||||||    
T  20826819 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaac 20826729  T

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Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 2389051 - 2389151
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  2389051 cactaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 2389149  T
Q  392 ac 393  Q
    ||    
T  2389150 ac 2389151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 36899673 - 36899773
Alignment:
Q  292 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 391  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  36899673 cactaacgaaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 36899771  T
Q  392 ac 393  Q
    ||    
T  36899772 ac 36899773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 20831101 - 20831190
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  | |||||     |||| ||||||||||||||||||||||||    
T  20831101 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaac 20831190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 48868588 - 48868676
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |  ||||| | | |||||| |||||||| || ||||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaac 48868676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 25770577 - 25770495
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||  |||||| ||| |||  |||||||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaac 25770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 35300876 - 35300793
Alignment:
Q  262 cgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaagga 345  Q
    ||||||||| |||||| | ||||| ||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  35300876 cgttagaaaattgacaccagggaccatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaagga 35300793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 44504344 - 44504266
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||  |||||| ||| | | ||||||||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaac 44504266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 9218348 - 9218430
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||| ||||||||||||||||||| ||  |||| || ||||| ||  |||||| ||||||| ||||||||||||||||    
T  9218348 tagggatttaaaaaacatttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaac 9218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  319 ttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||| |||| |||||||||||||| |  ||||||||  |||||| ||| ||||||||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 37172337 - 37172255
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| |||||||||||||| ||||||| |||||| || || ||||| ||  |||||| ||| ||||||||||||||||||||    
T  37172337 taggggttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaac 37172255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 54588546 - 54588458
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgc--aaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |  ||||| || |||  |||| ||||||||| |||||||||||||    
T  54588546 aaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaagtc-tgccaaaaatgtagggaccgaaaacatatttaa 54588458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 3799811 - 3799723
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||| | |||||||  ||||| || ||||||  | | |||| |||||||| ||||| |||||||||    
T  3799811 aaaatgtagggattttaaaaacatttacttaaatgtagagactatttatcaaaagagcgtaaaatgtagggactaaaaagatatttaac 3799723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 44504387 - 44504475
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  |||||   |||||||| ||| |||| ||||||| |||||||    
T  44504387 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaac 44504475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 48867739 - 48867651
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| |||||||||||| ||||||||||||||| |||||| |  | ||| | | |||||| |||||||| || ||||||||||||    
T  48867739 aaaatgtaaggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaac 48867651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 132069 - 132148
Alignment:
Q  314 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||| |||||||||||||||| |  |||||   |||||||| ||| |||| ||| |||||||||||    
T  132069 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaac 132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 131948 - 132026
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||| ||||||||||||||||||||  | ||||| || ||||| | ||||| |||||||| | |||||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactatatttcaaagtcatgcaacatgtaggaaccaaaaataaatttaac 132026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 50732437 - 50732367
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaa 381  Q
    |||||||||| |||||||||||||||||| || ||||| || | ||| || ||||||| ||||||||||||    
T  50732437 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaaa 50732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 50780418 - 50780488
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaa 381  Q
    |||||||||| |||||||||||||||||| || ||||| || | ||| || ||||||| ||||||||||||    
T  50780418 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaaa 50780488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 7248488 - 7248533
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  7248488 gaaaaatgtagggattttaaaaatatttattaaaatgtgaggacta 7248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 26741138 - 26741210
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaa 383  Q
    ||||| ||||||| ||||||||||||||||||||| || || ||||| ||  |||||| ||||||| ||||||    
T  26741138 tagggtttttaaagacatttattgaaatgtaaggattatttttcaaagtcacgcaaaatgtagggagcaaaaa 26741210  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 47342835 - 47342747
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||| ||| ||||||||||||||||| | ||||||| |||||| || ||||||| | | ||||  |||| || |||||||||||||||    
T  47342835 aaaatatagtgattttaaaaacatttacttaaatgtagggactatttatcaaaatagcgtaaaatttaggaactaaaaacatatttaac 47342747  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 51587619 - 51587575
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 348  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||    
T  51587619 aaaaatatagggattttaaaaatatttattgaaatgtaatgacta 51587575  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 33225577 - 33225490
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    ||||||| ||||||||||||||||||| | ||||||| |||||| || |||||   | | |||| |||| ||| ||||||||||||||    
T  33225577 aaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaaggagcgtaaaatgtagagactaaaaacatatttaa 33225490  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 47343726 - 47343779
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaa 358  Q
    ||||||||||||||||||||||||||| | |||||||  ||||| || ||||||    
T  47343726 aaaatgtagggattttaaaaacatttacttaaatgtagagactatttatcaaaa 47343779  T

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Target: scaffold0085 (Bit Score: 262; Significance: 1e-146; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 393
Target Start/End: Original strand, 39564 - 39940
Alignment:
Q  16 gccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcg 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  39564 gccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccacacccgcaacagcaaacactttcaacgataacatcatcgctttcg 39663  T
Q  116 gcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccgacgatccgcatctacgaagctgcggagaaagatcgtggtgaag 215  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| | ||||| |||||||||| | |||||||||||| ||||||||||    
T  39664 gcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatctgcatctacgacgttgcggagaaagaccgtggtgaag 39763  T
Q  216 ttctccgccgttttcccgcgagattgaaccgccaacattggcatcacgttagaaatttgacaacggggactatttacactaactcaggaaaaatgtaggg 315  Q
    ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||| ||    
T  39764 ttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacggaggaaaaatgtaagg 39863  T
Q  316 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||    
T  39864 attttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaac 39940  T

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Target: scaffold0085; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 39511 - 39422
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||   |||| ||||||||||||||||||||||||    
T  39511 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcataaaatgtagggaccaaaaacatatttaac 39422  T

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Target: scaffold0148 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 32994 - 33083
Alignment:
Q  304 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||||||||||||||||    
T  32994 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaac 33083  T

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Target: scaffold0148; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 29365 - 29275
Alignment:
Q  303 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||| ||||||||||||    
T  29365 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaac 29275  T

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Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 107974 - 107896
Alignment:
Q  315 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||||||||||||||||||||||||||||| || ||||||||  | |||| ||||||||||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaac 107896  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 108123 - 108210
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattc-tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 392  Q
    |||||||  |||||||||||||||||| |||||||| |||| |||||| ||||||  | |||||| ||| |||| ||||||||||||||    
T  108123 aaaatgtgaggattttaaaaacatttaatgaaatgt-aggaataattcttcaaaagggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 35048 - 34966
Alignment:
Q  311 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    ||||||||||| ||||||||||| ||| ||||||| || |||||||| ||  |||||| |  | || ||||||||||||||||    
T  35048 tagggattttagaaacatttattaaaacgtaaggaatatttctcaaagtcacgcaaaatgatgagatcaaaaacatatttaac 34966  T

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Target: scaffold0177 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 25843 - 25931
Alignment:
Q  305 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 393  Q
    |||||||| | | |||||||| ||||| | ||||||| |||||| || ||||||  | | |||| |||||||| |||||||||||||||    
T  25843 aaaatgtaagaactttaaaaatatttacttaaatgtagggactatttatcaaaagagcgtaaaatgtagggactaaaaacatatttaac 25931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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