View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19316_high_13 (Length: 344)

Name: NF19316_high_13
Description: NF19316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19316_high_13
NF19316_high_13
[»] chr3 (30 HSPs)
chr3 (12-169)||(9236050-9236207)
chr3 (211-326)||(9236232-9236347)
chr3 (50-170)||(21662888-21663007)
chr3 (50-167)||(54537445-54537561)
chr3 (73-167)||(52864975-52865069)
chr3 (56-169)||(51723386-51723498)
chr3 (50-170)||(51516960-51517078)
chr3 (50-170)||(53441934-53442053)
chr3 (84-170)||(23222985-23223071)
chr3 (53-170)||(12747724-12747840)
chr3 (91-168)||(25954051-25954128)
chr3 (56-168)||(44518044-44518155)
chr3 (84-170)||(19649606-19649692)
chr3 (65-170)||(12064936-12065040)
chr3 (80-167)||(2544489-2544577)
chr3 (53-169)||(45010778-45010893)
chr3 (118-169)||(20028499-20028549)
chr3 (119-169)||(9197109-9197159)
chr3 (50-168)||(36985158-36985275)
chr3 (50-168)||(37010597-37010714)
chr3 (79-170)||(8266263-8266352)
chr3 (57-169)||(43448967-43449078)
chr3 (52-164)||(49885383-49885493)
chr3 (107-170)||(47720727-47720790)
chr3 (82-164)||(32711235-32711317)
chr3 (52-141)||(5177822-5177909)
chr3 (65-161)||(29290795-29290890)
chr3 (52-164)||(29457873-29457983)
chr3 (82-162)||(48593175-48593255)
chr3 (50-114)||(53703813-53703877)
[»] chr2 (48 HSPs)
chr2 (65-170)||(11030219-11030323)
chr2 (50-170)||(41153138-41153257)
chr2 (65-170)||(11182192-11182297)
chr2 (53-170)||(38554485-38554601)
chr2 (50-169)||(7943467-7943586)
chr2 (50-169)||(12873725-12873843)
chr2 (73-170)||(12962729-12962826)
chr2 (59-170)||(4410804-4410915)
chr2 (59-169)||(38983027-38983136)
chr2 (82-170)||(9152406-9152494)
chr2 (73-169)||(32457241-32457337)
chr2 (50-164)||(22333558-22333671)
chr2 (53-170)||(20555263-20555378)
chr2 (53-169)||(5109368-5109483)
chr2 (54-169)||(5281206-5281319)
chr2 (119-170)||(29988962-29989013)
chr2 (73-169)||(28248961-28249057)
chr2 (91-163)||(35728499-35728571)
chr2 (52-164)||(45034402-45034512)
chr2 (82-169)||(10204959-10205046)
chr2 (84-167)||(39118049-39118132)
chr2 (84-170)||(3837437-3837523)
chr2 (59-169)||(30758748-30758856)
chr2 (73-167)||(39445019-39445113)
chr2 (50-170)||(36881535-36881648)
chr2 (90-170)||(2936334-2936414)
chr2 (50-170)||(11794452-11794570)
chr2 (50-114)||(42698147-42698210)
chr2 (52-164)||(45571034-45571144)
chr2 (52-164)||(45574701-45574811)
chr2 (52-164)||(45578368-45578478)
chr2 (52-164)||(45582035-45582145)
chr2 (52-164)||(45585702-45585812)
chr2 (52-164)||(45589369-45589479)
chr2 (52-164)||(45593036-45593146)
chr2 (52-164)||(45596703-45596813)
chr2 (52-164)||(45600370-45600480)
chr2 (52-164)||(45604037-45604147)
chr2 (52-164)||(45607704-45607814)
chr2 (52-164)||(45611371-45611481)
chr2 (52-164)||(45615038-45615148)
chr2 (84-139)||(7833317-7833372)
chr2 (119-170)||(28494774-28494825)
chr2 (52-170)||(30761382-30761499)
chr2 (123-169)||(32487064-32487110)
chr2 (82-167)||(41153144-41153229)
chr2 (119-167)||(12486062-12486110)
chr2 (73-169)||(33824374-33824470)
[»] chr7 (34 HSPs)
chr7 (43-170)||(28677344-28677470)
chr7 (50-170)||(36245403-36245522)
chr7 (66-170)||(29365648-29365751)
chr7 (85-170)||(6838411-6838496)
chr7 (50-170)||(2523797-2523916)
chr7 (59-170)||(8566108-8566218)
chr7 (59-170)||(11668042-11668152)
chr7 (50-170)||(13807244-13807359)
chr7 (73-170)||(41850620-41850717)
chr7 (72-170)||(39153314-39153412)
chr7 (65-169)||(32811738-32811840)
chr7 (119-169)||(2680886-2680936)
chr7 (84-170)||(48838347-48838433)
chr7 (45-162)||(10007611-10007727)
chr7 (50-167)||(10462379-10462495)
chr7 (43-164)||(32811411-32811530)
chr7 (72-169)||(45441464-45441561)
chr7 (50-170)||(24163270-24163390)
chr7 (82-170)||(30869213-30869301)
chr7 (62-170)||(45533244-45533351)
chr7 (73-169)||(48082823-48082918)
chr7 (44-170)||(40142800-40142925)
chr7 (82-170)||(2399979-2400067)
chr7 (91-162)||(2610229-2610300)
chr7 (82-161)||(30823742-30823821)
chr7 (73-155)||(34117981-34118063)
chr7 (50-112)||(43174363-43174425)
chr7 (53-162)||(44682571-44682679)
chr7 (45-169)||(9979829-9979951)
chr7 (52-164)||(27231867-27231977)
chr7 (119-170)||(28298924-28298975)
chr7 (50-112)||(32811380-32811441)
chr7 (72-170)||(40176063-40176161)
chr7 (47-164)||(45123244-45123360)
[»] chr1 (33 HSPs)
chr1 (72-170)||(38590093-38590191)
chr1 (54-170)||(519860-519975)
chr1 (52-170)||(38040303-38040420)
chr1 (59-170)||(38737958-38738068)
chr1 (57-170)||(34146832-34146943)
chr1 (82-170)||(26070857-26070945)
chr1 (50-170)||(26924215-26924334)
chr1 (54-170)||(49944839-49944954)
chr1 (84-170)||(44939093-44939179)
chr1 (52-162)||(50155333-50155442)
chr1 (65-169)||(8971245-8971348)
chr1 (50-170)||(26760200-26760319)
chr1 (82-170)||(34332509-34332597)
chr1 (84-170)||(6661549-6661635)
chr1 (73-169)||(15342961-15343057)
chr1 (91-170)||(15286036-15286115)
chr1 (43-162)||(29256634-29256751)
chr1 (65-170)||(11386171-11386275)
chr1 (80-153)||(25554570-25554643)
chr1 (79-167)||(34146835-34146922)
chr1 (52-164)||(43929379-43929489)
chr1 (84-164)||(23923585-23923665)
chr1 (52-164)||(34662686-34662796)
chr1 (52-164)||(47678289-47678399)
chr1 (122-161)||(9387259-9387298)
chr1 (45-111)||(2351130-2351195)
chr1 (50-112)||(26924298-26924359)
chr1 (73-170)||(6793618-6793715)
chr1 (47-112)||(26760172-26760236)
chr1 (73-169)||(27819339-27819436)
chr1 (73-169)||(24305693-24305789)
chr1 (52-164)||(47844538-47844648)
chr1 (132-168)||(52427376-52427412)
[»] chr4 (38 HSPs)
chr4 (50-170)||(44111772-44111891)
chr4 (54-170)||(42670770-42670885)
chr4 (50-170)||(48361054-48361173)
chr4 (50-170)||(53225671-53225790)
chr4 (58-169)||(21554137-21554246)
chr4 (50-170)||(48195892-48196011)
chr4 (82-169)||(25477573-25477660)
chr4 (59-170)||(30191907-30192017)
chr4 (47-169)||(45828443-45828564)
chr4 (73-169)||(4386160-4386256)
chr4 (54-170)||(32714296-32714411)
chr4 (52-139)||(41116566-41116652)
chr4 (59-170)||(42169070-42169180)
chr4 (52-162)||(42804260-42804368)
chr4 (54-170)||(8347651-8347766)
chr4 (50-170)||(47943729-47943848)
chr4 (47-168)||(696379-696499)
chr4 (47-168)||(764677-764797)
chr4 (65-170)||(3162912-3163016)
chr4 (52-169)||(16412238-16412354)
chr4 (51-164)||(43020759-43020870)
chr4 (65-162)||(43117889-43117985)
chr4 (82-162)||(25700486-25700566)
chr4 (65-169)||(36132663-36132766)
chr4 (90-169)||(35429801-35429880)
chr4 (90-164)||(26066410-26066484)
chr4 (84-170)||(45096609-45096695)
chr4 (84-169)||(9044415-9044500)
chr4 (117-170)||(19150791-19150844)
chr4 (73-170)||(50121461-50121558)
chr4 (53-141)||(9894630-9894717)
chr4 (105-169)||(17284763-17284827)
chr4 (52-164)||(20459274-20459384)
chr4 (52-164)||(47866040-47866150)
chr4 (82-169)||(55951690-55951777)
chr4 (54-164)||(20745365-20745473)
chr4 (45-114)||(24100756-24100824)
chr4 (119-168)||(44061417-44061466)
[»] chr8 (27 HSPs)
chr8 (73-170)||(16448816-16448913)
chr8 (52-170)||(5031468-5031585)
chr8 (54-170)||(7693060-7693175)
chr8 (59-170)||(15720210-15720320)
chr8 (52-169)||(10184579-10184695)
chr8 (72-168)||(42122995-42123091)
chr8 (85-168)||(24618987-24619070)
chr8 (59-161)||(10839774-10839875)
chr8 (53-170)||(8453622-8453737)
chr8 (85-169)||(8793755-8793839)
chr8 (73-169)||(8803252-8803348)
chr8 (50-170)||(35149695-35149814)
chr8 (73-170)||(32597525-32597622)
chr8 (73-169)||(40483311-40483407)
chr8 (84-155)||(27789314-27789385)
chr8 (50-168)||(1223125-1223242)
chr8 (54-164)||(12958782-12958890)
chr8 (45-169)||(3236329-3236450)
chr8 (52-164)||(6899424-6899534)
chr8 (54-162)||(24915205-24915311)
chr8 (53-114)||(4156385-4156446)
chr8 (52-112)||(8803313-8803372)
chr8 (55-103)||(15726853-15726900)
chr8 (66-138)||(22193619-22193690)
chr8 (72-164)||(34711104-34711196)
chr8 (90-169)||(36191775-36191852)
chr8 (52-164)||(36366058-36366168)
[»] chr5 (29 HSPs)
chr5 (50-170)||(38394430-38394549)
chr5 (85-169)||(919670-919754)
chr5 (82-170)||(18473508-18473596)
chr5 (53-170)||(5002167-5002283)
chr5 (50-162)||(11931971-11932083)
chr5 (84-170)||(33478142-33478228)
chr5 (50-169)||(34297202-34297323)
chr5 (50-170)||(13789759-13789878)
chr5 (73-169)||(36434706-36434802)
chr5 (50-169)||(21488311-21488429)
chr5 (65-163)||(39239811-39239909)
chr5 (82-167)||(36286089-36286174)
chr5 (122-170)||(18391525-18391573)
chr5 (119-170)||(13664973-13665024)
chr5 (72-139)||(14723409-14723476)
chr5 (72-168)||(19295986-19296083)
chr5 (84-169)||(22101943-22102028)
chr5 (50-170)||(29299359-29299479)
chr5 (54-162)||(14913141-14913248)
chr5 (52-164)||(26327539-26327650)
chr5 (44-164)||(29031070-29031188)
chr5 (50-164)||(1015189-1015301)
chr5 (105-162)||(1248885-1248942)
chr5 (47-164)||(27488346-27488461)
chr5 (122-170)||(14221872-14221920)
chr5 (52-164)||(15968315-15968425)
chr5 (46-114)||(20502170-20502237)
chr5 (50-114)||(29002744-29002807)
chr5 (50-114)||(38978825-38978888)
[»] chr6 (16 HSPs)
chr6 (50-170)||(12999782-12999902)
chr6 (79-169)||(12450381-12450471)
chr6 (54-167)||(28630759-28630871)
chr6 (82-170)||(27909007-27909096)
chr6 (65-169)||(3064900-3065003)
chr6 (91-170)||(17265748-17265827)
chr6 (95-170)||(30627869-30627944)
chr6 (117-170)||(30895252-30895305)
chr6 (82-170)||(2972197-2972285)
chr6 (50-164)||(2230382-2230495)
chr6 (119-169)||(9077656-9077706)
chr6 (53-169)||(10283322-10283437)
chr6 (90-169)||(15467597-15467676)
chr6 (50-164)||(8646712-8646824)
chr6 (82-139)||(3673826-3673883)
chr6 (122-170)||(3046686-3046734)
[»] scaffold0110 (1 HSPs)
scaffold0110 (50-170)||(1560-1678)
[»] scaffold0236 (1 HSPs)
scaffold0236 (91-170)||(16678-16757)
[»] scaffold0136 (1 HSPs)
scaffold0136 (73-168)||(16553-16648)
[»] scaffold0238 (1 HSPs)
scaffold0238 (84-154)||(2539-2609)
[»] scaffold0070 (1 HSPs)
scaffold0070 (65-169)||(40162-40266)
[»] scaffold0086 (1 HSPs)
scaffold0086 (119-170)||(1507-1557)
[»] scaffold0001 (1 HSPs)
scaffold0001 (59-170)||(156795-156905)
[»] scaffold0123 (1 HSPs)
scaffold0123 (122-162)||(28124-28164)


Alignment Details
Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 9236050 - 9236207
Alignment:
Q  12 aagaattaatgacgtgtatttttaaaataactaattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgta 111  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9236050 aagaattaatgatgtgtatttttaaaataactaattattctctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaattgatgta 9236149  T
Q  112 tctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||||||||||||||  ||||| |||| |||||||||||||||||||||||||||    
T  9236150 tctgatatagaatatagactaaatatatcatttatgtaatgaatcaaaaaagtcaaat 9236207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 9236232 - 9236347
Alignment:
Q  211 tttatacgtgtttgccaaaataaagtgtccaaatacgtatgatcatacaagatttcttctcataattcaactggtttaacccaaaacgcagtatttagca 310  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9236232 tttatacgtgtttgccaaaataaagtgtccaaatacgaatgatcatataagacttcttctcataattcaactggtttaacccaaaacgcagtatttagca 9236331  T
Q  311 taaagcacaccatata 326  Q
     ||| |||||||||||    
T  9236332 aaaaacacaccatata 9236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 21662888 - 21663007
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||| ||| ||||||| |||||||||||||| | |||||  || |||||| |||||| ||||||||||| ||||| |    
T  21662888 tccctccggtcctatttataagaaaaa-gttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatgca 21662986  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||| |||||    
T  21662987 atgaatcaaaaaagttaaatg 21663007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 54537445 - 54537561
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    ||||| |||||||| ||||||||||||  || ||||||  |||||||||||||| ||||||||||  | ||||||||||||||||||||  | ||||| |    
T  54537445 tcccttcgatcctatttataagaaaaat-ttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgca 54537543  T
Q  150 atgaatcaaaaaagtcaa 167  Q
    ||||||||||||||||||    
T  54537544 atgaatcaaaaaagtcaa 54537561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 52864975 - 52865069
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||| |||||||||| |||||||||||||| |||||||||| || || ||||||||  ||||| |||| ||||| |||||||||||||||||||    
T  52864975 aaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaaagtcaa 52865069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 51723386 - 51723498
Alignment:
Q  56 cgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaat 155  Q
    |||||||| |||||||||||| ||| | ||||| |||||||||||||| | |||||| ||||||||||||||||  ||||| |||| ||||  |||||||    
T  51723386 cgatcctatttataagaaaaa-gttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaat 51723484  T
Q  156 caaaaaagtcaaat 169  Q
    ||||||||| ||||    
T  51723485 caaaaaagttaaat 51723498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 51516960 - 51517078
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||| ||| ||||||| |||| || |||||| | |||||  ||  |||||||||||| ||||||||||| ||||| |    
T  51516960 tccctccggtcctatttataagaaaaa-gttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatgca 51517057  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||||    
T  51517058 atgaaccaaaaaagtcaaatg 51517078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 53442053 - 53441934
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||| ||| |||||||  ||||||||| ||| | |||||  || |||||||| || | ||||||||||| ||||| |    
T  53442053 tccctccggtcctatttataagaaaaa-gttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgca 53441955  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||| |||||    
T  53441954 atgaatcaaaaaagtaaaatg 53441934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 23223071 - 23222985
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||| ||||||||||  | || |||||||| ||||||||||| |||| |||| ||| ||||||||||||||    
T  23223071 tttttagattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaattaaaaaagtcaaatg 23222985  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 12747840 - 12747724
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| ||||||||||||| || | ||||| ||||||| |||||| |||||||| || | ||||||||| | ||||||||  | ||||| ||||    
T  12747840 ctccggtcctatttataagaaaaaa-ttgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaatttatgcaatg 12747742  T
Q  153 aatcaaaaaagtcaaatg 170  Q
    |||||||||| |||||||    
T  12747741 aatcaaaaaaatcaaatg 12747724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 25954128 - 25954051
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    ||||||||||||| | ||||||||  | |||||||||||||||||| |||| |||| |||||||| ||||||||||||    
T  25954128 attcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaaaagtcaaa 25954051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 44518044 - 44518155
Alignment:
Q  56 cgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaat 155  Q
    |||||||| |||||||||||   || ||||||| |||||||||||||| | ||||||||  | || |||||||| ||||||||||| |||   |||||||    
T  44518044 cgatcctatttataagaaaact-ttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaat 44518142  T
Q  156 caaaaaagtcaaa 168  Q
    |||||||||||||    
T  44518143 caaaaaagtcaaa 44518155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 19649692 - 19649606
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||| ||||||||  | | || ||||||||  |||||||||| ||||  ||||||||||||||||||||||    
T  19649692 tttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatcaaaaaagtcaaatg 19649606  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 12065040 - 12064936
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| || |||||||  ||||||| ||||| | || ||| |  ||||||||||||| ||||||||||| | ||| ||||||||||||||||    
T  12065040 ttataagaaaaaa-ttgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  165 caaatg 170  Q
     |||||    
T  12064941 aaaatg 12064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 2544489 - 2544577
Alignment:
Q  80 taacttttttgattcattgagtaaatgatgtatct-gatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||||||| | |||||||| ||| |||||||||| | |||| | |||||| ||||||||||||||||  |||||||| ||||||||||    
T  2544489 taactttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaa 2544577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 45010893 - 45010778
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| |||||||| |||| |||| ||||| |||| ||||| ||| ||||||||||  | ||||||||||| || | |||||| ||||  |||     
T  45010893 ctccggtcctatttataagagaaaa-ttaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttatacaata 45010795  T
Q  153 aatcaaaaaagtcaaat 169  Q
    |||||||||||||||||    
T  45010794 aatcaaaaaagtcaaat 45010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 20028549 - 20028499
Alignment:
Q  118 atagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  20028549 atagaatatagatcaaatacatcatttatgaaatgaat-aaaaaagtcaaat 20028499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 9197159 - 9197109
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||||||  |||||||||| ||||| |||||||||||||||||||||    
T  9197159 tagaatatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 9197109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 36985158 - 36985275
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||  ||||| ||||  |||| ||||  ||| | ||||||||  | |||||||||||  |||||||| | ||||| |    
T  36985158 tccctccggtcctatttataagaaaat-gttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgca 36985256  T
Q  150 atgaatcaaaaaagtcaaa 168  Q
    |||||||||||||||||||    
T  36985257 atgaatcaaaaaagtcaaa 36985275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 37010597 - 37010714
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||  ||||| ||||  |||| ||||  ||| | ||||||||  | |||||||||||  |||||||| | ||||| |    
T  37010597 tccctccggtcctatttataagaaaat-gttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgca 37010695  T
Q  150 atgaatcaaaaaagtcaaa 168  Q
    |||||||||||||||||||    
T  37010696 atgaatcaaaaaagtcaaa 37010714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 8266263 - 8266352
Alignment:
Q  79 ttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||| |||||||||||||| |||||||| | || || |||||  | |||| |||| | ||||  ||||||||||||||||||||||    
T  8266263 ttaactttttagattcattgagtaattgatgtattttatctaaaatat--accaaacacattatttatacaatgaatcaaaaaagtcaaatg 8266352  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 43448967 - 43449078
Alignment:
Q  57 gatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatc 156  Q
    ||||||| |||||||||||| ||| | ||||| |||||||||||||| |||| |||||  | ||  ||||| | ||||||||||| ||||  |||||| |    
T  43448967 gatcctatttataagaaaaa-gttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaacc 43449065  T
Q  157 aaaaaagtcaaat 169  Q
    |||||| ||||||    
T  43449066 aaaaaaatcaaat 43449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 49885383 - 49885493
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||||| ||| ||||||||||||| |||| ||||| |||||||| | ||| ||||||||||  | ||||| ||||| ||||||||||| ||||  | |    
T  49885383 cctccgattctatttataagaaaaaa-ttaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacatcaattatccact 49885480  T
Q  152 gaatcaaaaaagt 164  Q
     ||||||||||||    
T  49885481 taatcaaaaaagt 49885493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 47720727 - 47720790
Alignment:
Q  107 atgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| || ||||||||||| | |||||| |||| |||||||||||||| ||||| |||||||    
T  47720727 atgtatttggtatagaatataaaccaaatatatcatttatgtaatgaatcgaaaaaatcaaatg 47720790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 32711317 - 32711235
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||| |||||||||| ||| ||||||||||| | || |||||||  ||||||||||| ||||  |||||| | |||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagt 32711235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 5177909 - 5177822
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatca 141  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| || |  ||||| ||||| |||||||||||    
T  5177909 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctaacttagaa-atagaccaaatacatca 5177822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 29290795 - 29290890
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaa 161  Q
    ||||||||||||| || ||||||| ||||||||||  || ||||||||||||| || | ||||||  |||||||| | ||||  ||||||| |||||    
T  29290795 ttataagaaaaaa-ttcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaattaaaaa 29290890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 29457983 - 29457873
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| | ||| |||||||||||| ||||||||||| |||||||| | | | ||||||| ||  | ||||| ||||| |||||||||||  |||  |||    
T  29457983 cctccggttctatttataagaaaaa-gttaactttttagattcattcaatgattgatgtacctagtctagaa-atagaccaaatacatcaactattcaat 29457886  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  29457885 gaatcaaaaaagt 29457873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 48593175 - 48593255
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    ||||||| ||| |||||| ||| ||||||||| | | ||||||||||| ||||||||| | ||||  |||||||| |||||    
T  48593175 actttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaa 48593255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 53703877 - 53703813
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||||||| ||||  |||||||||||||||| || |||| | ||||||| |||| ||||||||||    
T  53703877 tccctccggtccttattataagaaaaaagttgaccttttaggttcattgtgtaagtgatgtatct 53703813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 11030323 - 11030219
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  11030323 ttataagaaaaaa-ttaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaagt 11030225  T
Q  165 caaatg 170  Q
    ||||||    
T  11030224 caaatg 11030219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 41153257 - 41153138
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||| |||||||| || | || |||||||| ||||||||||| ||||| |    
T  41153257 tccctccgatcctatttataagaaaaa-gttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgca 41153159  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  41153158 atgaatcaaaaaagtcaaatg 41153138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 11182297 - 11182192
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    |||||| |||||| ||||||||||  ||| ||||||||| |||||||| |||||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  11182297 ttataaaaaaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttatggaatgaatcaaaaaagt 11182198  T
Q  165 caaatg 170  Q
    ||||||    
T  11182197 caaatg 11182192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 38554601 - 38554485
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| |||||||||||| |||||||||||  ||||||||||||| | |||||  || ||||||||||||| ||||||||| | ||||||||||    
T  38554601 ctccggtcctatttataagaaaaa-gttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatg 38554503  T
Q  153 aatcaaaaaagtcaaatg 170  Q
    |||||||| |||||||||    
T  38554502 aatcaaaatagtcaaatg 38554485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 7943586 - 7943467
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||| || ||||||| |||||||||| ||| ||||||||||  | || |||||||| |||||| |||| ||||| |    
T  7943586 tccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgca 7943487  T
Q  150 atgaatcaaaaaagtcaaat 169  Q
    |||||| |||||||||||||    
T  7943486 atgaataaaaaaagtcaaat 7943467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 12873725 - 12873843
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||||||||  |||||||||||| ||| ||||||| |||||||| ||||| | |||||| || |||||||||||||  |||||||||| ||||| |    
T  12873725 tccctccgatcctttttataagaaaaa-gttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttatgca 12873823  T
Q  150 atgaatcaaaaaagtcaaat 169  Q
    ||||||||| ||||||||||    
T  12873824 atgaatcaataaagtcaaat 12873843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 12962729 - 12962826
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||| ||||||| |||||||||||||| | |||||  || |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  12962729 aaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatg 12962826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 4410915 - 4410804
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| |||||||||||||||| ||||||| ||||||||| |||| | ||||||||  | || |||||||||||||||||||| ||||| ||| ||||||    
T  4410915 tcctatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaataaatcaa 4410816  T
Q  159 aaaagtcaaatg 170  Q
    ||| || |||||    
T  4410815 aaaggttaaatg 4410804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 38983136 - 38983027
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| |||||| ||||||||| | ||||| ||||||||| |||| ||||||||||  | |||||||||||  |||||||||| ||||| ||||||||||    
T  38983136 tcctatttataa-aaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaa 38983038  T
Q  159 aaaagtcaaat 169  Q
    |||||||||||    
T  38983037 aaaagtcaaat 38983027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 9152494 - 9152406
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||||||||||| ||||||||||  | || |||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  9152494 actttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactcaaaaaagtcaaatg 9152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 32457337 - 32457241
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| || ||||||| |||||||| ||||| ||||||||||  | |||||||||||  |||||||||| ||||| |||||||||||||||||||||    
T  32457337 aaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaat 32457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 22333671 - 22333558
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||| | ||||| |||| |||||||| || ||||||| |||||||||||||| | || ||  ||||||| |||||||||||||||||| | ||||| |    
T  22333671 tccctctggtcctagttattagaaaaaa-ttgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttatgca 22333573  T
Q  150 atgaatcaaaaaagt 164  Q
    |||||||||||||||    
T  22333572 atgaatcaaaaaagt 22333558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 20555263 - 20555378
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| ||||||||||||| |||| ||||| ||| |||||| ||| ||||||||||  | ||||||||||| ||||||||| | ||||||||||    
T  20555263 ctccggtcctatttataagaaaaaa-ttaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatg 20555361  T
Q  153 aatcaaaaaagtcaaatg 170  Q
    ||| |||||||| |||||    
T  20555362 aat-aaaaaagttaaatg 20555378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 5109368 - 5109483
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| ||||||||||| |||||||||||| |||||||||||||| | |||||| || ||||||||||||   |||||||| | ||||    ||    
T  5109368 ctccggtcctatttataagaaaa-agttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttatactttg 5109466  T
Q  153 aatcaaaaaagtcaaat 169  Q
    |||||||||||||||||    
T  5109467 aatcaaaaaagtcaaat 5109483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 5281319 - 5281206
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    ||||||| || |||||||||||| ||| |||||||  ||| |||  |||| | |||||| || |||| |||||||||||||||||||| ||||| |||||    
T  5281319 tccgatcatatttataagaaaaa-gttgactttttatatt-attttgtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatga 5281222  T
Q  154 atcaaaaaagtcaaat 169  Q
    ||||||||||||||||    
T  5281221 atcaaaaaagtcaaat 5281206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 29988962 - 29989013
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29988962 tagaatatagatcaaatacatcatttatgcaatgaatcaaaaaagtcaaatg 29989013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 28249057 - 28248961
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||| ||||||| |||||||| | ||| | |||||| || |||||||||||||  |||||||| | ||||| ||| |||||||||||||||||    
T  28249057 aaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaagtcaaat 28248961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 35728571 - 35728499
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaag 163  Q
    ||||||||| ||| ||||||||||  | ||||||||||| |||||| |||| ||||| |||||||||||||||    
T  35728571 attcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaaag 35728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45034402 - 45034512
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||| |||||||||||| |||||||| | ||| ||||||| || |  ||||| ||||| |||||||||||  |||  |||    
T  45034402 cctccggtcctatttataagaaaa-agttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaat 45034499  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45034500 gaatcaaaaaagt 45034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 10204959 - 10205046
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||| ||||||||||| || ||||||||||  | || ||||||||  |||||||||| ||||  |||||||||||| ||||||||    
T  10204959 actttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaagagtcaaat 10205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 39118049 - 39118132
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||| ||| |||||||||| |||| ||||| || ||||||||||| ||||||||| | ||||  ||| |||||||||||||||    
T  39118049 tttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaaagtcaa 39118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 3837523 - 3837437
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| ||| |||||||||| |||| |||||  | || |||||||| ||||||||| | ||||| |||||||||||||| |||||||    
T  3837523 tttttcgatgcattgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatcaaaaaaatcaaatg 3837437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 30758856 - 30758748
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||  || ||||||| |||| ||||||||| ||||||||||  | || | |||||| |||||||| || ||||| ||||||| ||    
T  30758856 tcctatttataagaaaaat-ttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaataaa 30758759  T
Q  159 aaaagtcaaat 169  Q
    |||||||||||    
T  30758758 aaaagtcaaat 30758748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 39445019 - 39445113
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||| || ||||||  |||||||||||||| |||||||| |  | |||||||||||| ||||||| || ||||| ||| ||| |||||||||||    
T  39445019 aaaaatttgacttttaagattcattgagtaattgatgtattttgtctagaatatagattaaatacaccatttatgcaataaattaaaaaagtcaa 39445113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 36881535 - 36881648
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| | ||| ||||||||||||  || ||||||| ||| |||||||||| | |||||||| |      ||||||| ||||| ||| | |||||||    
T  36881535 tccctccggttctatttataagaaaaat-ttgactttttagatacattgagtaattaatgtatctta------atatagaccaaattcattatttatgta 36881627  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  36881628 atgaatcaaaaaagtcaaatg 36881648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 2936334 - 2936414
Alignment:
Q  90 gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||| | |||||  || |||||||||||||  ||||| ||||  |||  ||||||||||||||||||||||    
T  2936334 gattcattgagtaattaatgtacttggtatagaatatagactaaatatatcatctatccaatgaatcaaaaaagtcaaatg 2936414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 11794452 - 11794570
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    ||||||||| |||| ||||||||||||| || | ||||| |||| ||||| ||| | |||||  || |||||||| |||||||||||||||| |||||      
T  11794452 tccctccga-cctatttataagaaaaaa-ttgattttttagatttattgaataattaatgtacttggtatagaatgtagatcaaatacatcatttatgcc 11794549  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||| || |||||    
T  11794550 atgaaacaaaaatgtaaaatg 11794570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 42698210 - 42698147
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    ||||||||||| || |||||| |||||| || ||||||| |||||||||||||| ||||||||||    
T  42698210 tccctccgatcatatttataa-aaaaaatttgactttttagattcattgagtaattgatgtatct 42698147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45571034 - 45571144
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45571034 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45571131  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45571132 gaatcaaaaaagt 45571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45574701 - 45574811
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45574701 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45574798  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45574799 gaatcaaaaaagt 45574811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45578368 - 45578478
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45578368 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45578465  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45578466 gaatcaaaaaagt 45578478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45582035 - 45582145
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45582035 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45582132  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45582133 gaatcaaaaaagt 45582145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45585702 - 45585812
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45585702 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45585799  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45585800 gaatcaaaaaagt 45585812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45589369 - 45589479
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45589369 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45589466  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45589467 gaatcaaaaaagt 45589479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45593036 - 45593146
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45593036 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45593133  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45593134 gaatcaaaaaagt 45593146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45596703 - 45596813
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45596703 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45596800  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45596801 gaatcaaaaaagt 45596813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45600370 - 45600480
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45600370 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45600467  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45600468 gaatcaaaaaagt 45600480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45604037 - 45604147
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45604037 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45604134  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45604135 gaatcaaaaaagt 45604147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45607704 - 45607814
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45607704 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45607801  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45607802 gaatcaaaaaagt 45607814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45611371 - 45611481
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45611371 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45611468  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45611469 gaatcaaaaaagt 45611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 45615038 - 45615148
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  45615038 cctccggtcctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 45615135  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  45615136 gaatcaaaaaagt 45615148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 7833317 - 7833372
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacat 139  Q
    ||||| |||||||||| ||| ||||||||||||| || ||||||||||| ||||||    
T  7833317 tttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacat 7833372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 28494774 - 28494825
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||| |||||||    
T  28494774 tagaatatagaccaaatatatcatttatgcaatgaatcaaaaaaatcaaatg 28494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 30761382 - 30761499
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||| |  || |||||||  ||||||||||||| | || |||||  | |||||||||||  ||||||||   || || |||    
T  30761382 cctccggtcctatttataagaaacat-ttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaat 30761480  T
Q  152 gaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||    
T  30761481 gaatcaaaaaagtcaaatg 30761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 32487064 - 32487110
Alignment:
Q  123 atatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  32487064 atatagaccaaatacattatttatgcaatgaatcaaaaaagtcaaat 32487110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 41153144 - 41153229
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    |||||||||||||||||  |||||||||||| || | || | |||| | ||||||||||| |||   |||||||| ||||||||||    
T  41153144 acttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaa 41153229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 12486062 - 12486110
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||||||||| ||||||||||| ||||  |||||||| ||||||||||    
T  12486062 tagaatatagaccaaatacatcaattattcaatgaatctaaaaagtcaa 12486110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 33824374 - 33824470
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| || |||||||  ||||||||||||| |||| |||||  | || |||||| || ||||| |||| ||||  ||||||||| |||||||||||    
T  33824374 aaaaatttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttatacaatgaatcagaaaagtcaaat 33824470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 28677470 - 28677344
Alignment:
Q  43 taattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcac 142  Q
    |||||| |||||||||||||| ||||||||||||| || ||||||| |||| ||||||||| ||||||||||  | ||||||||||| |||||||||||     
T  28677470 taattactccctccgatcctatttataagaaaaaa-ttgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 28677372  T
Q  143 ttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| ||||||||||||||||||||||    
T  28677371 ttatgcaatgaatcaaaaaagtcaaatg 28677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 36245522 - 36245403
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||  ||||| ||||||||||||| || ||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||||||||| ||||| |    
T  36245522 tccctcctgtcctatttataagaaaaaa-ttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgca 36245424  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  36245423 atgaatcaaaaaagtcaaatg 36245403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 29365751 - 29365648
Alignment:
Q  66 tataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtc 165  Q
    |||||||||||| || ||||||| |||||||||||||| | |||||| || ||||||||||||||||||||||||| ||||| |||| || |||||||||    
T  29365751 tataagaaaaaa-ttgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaaaagtc 29365653  T
Q  166 aaatg 170  Q
    |||||    
T  29365652 aaatg 29365648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 6838411 - 6838496
Alignment:
Q  85 tttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||||||| | ||||||||  | ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  6838411 tttttgattcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatg 6838496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 2523916 - 2523797
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||| ||| ||||||| |||||||||||||| | |||||  ||  |||||||||||| || |||||||  ||||| |    
T  2523916 tccctccggtcctatttataagaaaaa-gttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatgca 2523818  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  2523817 atgaatcaaaaaagtcaaatg 2523797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 8566218 - 8566108
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||  || | ||||| |||||||||||||| ||||||||||  | ||||||||||| ||||||||||| ||||| ||||||||||    
T  8566218 tcctatttataagaaaaat-ttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 8566120  T
Q  159 aaaagtcaaatg 170  Q
    |||||| |||||    
T  8566119 aaaagttaaatg 8566108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 11668152 - 11668042
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||  || |||||||  ||||||||| ||| ||||||||||  | |||||||||||||||||| |||| ||||| ||||||||||    
T  11668152 tcctatttataagaaaaat-ttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaa 11668054  T
Q  159 aaaagtcaaatg 170  Q
    ||||||||||||    
T  11668053 aaaagtcaaatg 11668042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 13807244 - 13807359
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| || || |||||||||||| ||| ||||||| |||||||||||||| ||||    ||  | |||||||||||||||||| |||| |||||||    
T  13807244 tccctccggtcttatttataagaaaaa-gttgactttttagattcattgagtaattgat----cttctttagaatatagatcaaatatatcatttatgta 13807338  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  13807339 atgaatcaaaaaagtcaaatg 13807359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 41850620 - 41850717
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||| ||||| |||||||||| ||| | |||||| || |||| |||||||| ||||||||||| ||||| |||||||||||||||| |||||    
T  41850620 aaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaaaaagtaaaatg 41850717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 39153412 - 39153314
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| || ||||||| | |||||||||||| |||||||| || | || ||||||||  |||||||||| ||||| ||||||||||||||||||||||    
T  39153412 aaaaaaattgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatg 39153314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 32811840 - 32811738
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| |||| ||||| |||||||||||||| |||| ||| || |||||||||| || ||||||||||| ||||| ||| ||| ||||||||    
T  32811840 ttataagaaaaaa-ttaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacatcatttatggaattaat-aaaaaagt 32811743  T
Q  165 caaat 169  Q
    |||||    
T  32811742 caaat 32811738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 2680936 - 2680886
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  2680936 tagaatatagatcaaatacatcatttatataatgaatcaaaaaagtcaaat 2680886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 48838347 - 48838433
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| ||||||||||| || | |||||| || |||| |||||||| ||||||||||| ||||||||||||| |||||||| |||||    
T  48838347 tttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaaagttaaatg 48838433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 10007727 - 10007611
Alignment:
Q  45 attattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcactt 144  Q
    |||| |||||||| ||||| |||||||||||| ||| ||||||| |||||||||  ||| | ||||||||  | ||||||||||| ||||||||| | ||    
T  10007727 attactccctccggtcctatttataagaaaaa-gttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataattt 10007629  T
Q  145 atgtaatgaatcaaaaaa 162  Q
    ||| ||||||| ||||||    
T  10007628 atgaaatgaataaaaaaa 10007611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 10462379 - 10462495
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    ||||||||||| || |||||||||||| || | |||||| |||||||||||| | ||||||||||  | || |||||| | ||||||||||| ||||| |    
T  10462379 tccctccgatcttatttataagaaaaatgtga-ctttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgca 10462477  T
Q  150 atgaatcaaaaaagtcaa 167  Q
    |||||| ||||| |||||    
T  10462478 atgaataaaaaatgtcaa 10462495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 32811530 - 32811411
Alignment:
Q  43 taattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcac 142  Q
    |||||| |||||||| ||||| |||||||||||| ||||| ||||| |||||||| ||||| ||||||| ||    ||||| ||||| |||||||||||     
T  32811530 taattactccctccggtcctatttataagaaaaa-gttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaa 32811433  T
Q  143 ttatgtaatgaatcaaaaaagt 164  Q
    ||||  ||||||||||||||||    
T  32811432 ttattcaatgaatcaaaaaagt 32811411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 45441561 - 45441464
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||| |||||||||| |||||| ||| ||| || |||||||  | |||||||||||||||||||||||  |||  ||| |||||||||||||||||    
T  45441561 aaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagtcaaat 45441464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 24163270 - 24163390
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||| ||||||| || ||||||| |||||||||  ||| | ||||||||    ||||||||||| || |||||||| ||||| |    
T  24163270 tccctccggtcctatttataggaaaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcatttatgca 24163369  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||| |||||||| |||||    
T  24163370 atgaattaaaaaagtgaaatg 24163390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 30869301 - 30869213
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||||||| | ||||  ||| ||||||||| ||||||||    
T  30869301 actttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaaacgtcaaatg 30869213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 45533244 - 45533351
Alignment:
Q  62 tacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaa 161  Q
    |||||||||||||||| || ||||||| ||||||||  |||| | ||||||||  | ||||||||||| ||||||||| | ||||  ||||||| |||||    
T  45533244 tacttataagaaaaaa-ttgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaa 45533342  T
Q  162 agtcaaatg 170  Q
    |||||||||    
T  45533343 agtcaaatg 45533351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 48082823 - 48082918
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||| ||||||| ||||||||| |||| | |||||||   | ||||||||||| |||||||| || ||||||||||||| |||||||||||||    
T  48082823 aaaaagttgactttttagattcattgtgtaattaatgtatcatgtgtagaatataga-caaatacaccatttatgtaatgaataaaaaaagtcaaat 48082918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 40142925 - 40142800
Alignment:
Q  44 aattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcact 143  Q
    ||||| |||||||| |||||  |||||||||||| || | ||||| |||| ||||  ||| | ||||||||  | ||| ||||||| ||||||||| | |    
T  40142925 aattactccctccggtcctatgtataagaaaaaa-ttgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatt 40142827  T
Q  144 tatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||| ||||||||||||||||||||||    
T  40142826 tatgcaatgaatcaaaaaagtcaaatg 40142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 2400067 - 2399979
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| | ||| |||| ||| ||||||||||  | || ||||||||| |||||||||| ||||  ||||||||||||||||||||||    
T  2400067 actttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatg 2399979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 2610229 - 2610300
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    ||||||||||||| |||||||| || | |||||||||||  |||||||||| ||||| ||||||| ||||||    
T  2610229 attcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaattaaaaaa 2610300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 30823742 - 30823821
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaa 161  Q
    ||||||| ||||||||||| || | |||||| || ||||||||||||| ||||||||| | |||| |||||||| |||||    
T  30823742 actttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaataaaaaa 30823821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 34118063 - 34117981
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaat 155  Q
    |||||||| |||||||  |||||||| |||| | ||||||||  | ||||||||||| ||||||||||| ||||| |||||||    
T  34118063 aaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaat 34117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 43174425 - 43174363
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat 112  Q
    |||||||||||||| |||||| |||||| || |||||||| |||||||  |||||||||||||    
T  43174425 tccctccgatcctatttataaaaaaaaaatttacttttttaattcatttcgtaaatgatgtat 43174363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 44682571 - 44682679
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| ||||||||||||  || ||||||  |||||||| ||||| |||||||| |  | |||| |||||| |||||| |||| ||||| ||||    
T  44682571 ctccggtcctatttataagaaaaat-ttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttatgcaatg 44682669  T
Q  153 aatcaaaaaa 162  Q
    ||||||||||    
T  44682670 aatcaaaaaa 44682679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 9979951 - 9979829
Alignment:
Q  45 attattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcactt 144  Q
    |||| ||||||||| | || |||||||| |||| || ||||||| |||| ||||||||| | ||||||||  | |||||||| ||  |||||||||| ||    
T  9979951 attactccctccgaacttatttataaga-aaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcattt 9979853  T
Q  145 atgtaatgaatcaaaaaagtcaaat 169  Q
    ||| ||| |||||||| ||||||||    
T  9979852 atg-aataaatcaaaatagtcaaat 9979829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 27231977 - 27231867
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  27231977 cctccggtcctatttataagaaaaa-gttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 27231880  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  27231879 gaatcaaaaaagt 27231867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 28298924 - 28298975
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||| |  | ||||| ||||||||||||||||||||||    
T  28298924 tagaatatagatcaaatatactatttatgcaatgaatcaaaaaagtcaaatg 28298975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 32811380 - 32811441
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat 112  Q
    ||||||||||||||  ||||||||| || ||| ||||||||||||||||| ||| ||||||||    
T  32811380 tccctccgatcctatatataagaaacaattta-cttttttgattcattgaataattgatgtat 32811441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 40176161 - 40176063
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| || ||||||| |||||||| || || | |||||  || | ||||||||||| ||||||||||| ||| | ||||||| |||||||| |||||    
T  40176161 aaaaaaattgactttttagattcattaagaaattaatgtacttggtttagaatatagaccaaatacatcatttaagcaatgaataaaaaaagtgaaatg 40176063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 45123244 - 45123360
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgat-atagaatatagatcaaatacatcactta 145  Q
    ||||||||||| ||||   ||||| ||||||||| |||||||  |||||| || ||| | |||||||| || ||| ||||||||| | ||||||||||||    
T  45123244 tattccctccggtccttactataa-aaaaaagttgactttttaaattcatagaataattaatgtatcttattata-aatatagattagatacatcactta 45123341  T
Q  146 tgtaatgaatcaaaaaagt 164  Q
    |  ||||||||||||||||    
T  45123342 tacaatgaatcaaaaaagt 45123360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 38590191 - 38590093
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||    
T  38590191 aaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatcaaaaaagtcaaatg 38590093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 519975 - 519860
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||||||||| |||||||||||   |||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||  ||| |    
T  519975 tccgatcctatttataagaaaatt-ttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataa 519877  T
Q  154 atcaaaaaagtcaaatg 170  Q
    |||||||||||||||||    
T  519876 atcaaaaaagtcaaatg 519860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 52 - 170
Target Start/End: Complemental strand, 38040420 - 38040303
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||  || ||||||| |||||||||| ||| ||||||||||  | |||||||||||||||||| |||| ||||| |||    
T  38040420 cctccggtcctatttataagaaaaat-ttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaat 38040322  T
Q  152 gaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||    
T  38040321 gaatcaaaaaagtcaaatg 38040303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 38738068 - 38737958
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||  |||||||||| |||||||||||||| ||||||||||  | ||||||||| | ||||||||||  ||||| ||||||||||    
T  38738068 tcctatttataagaaaaat-ttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaa 38737970  T
Q  159 aaaagtcaaatg 170  Q
    ||||||||||||    
T  38737969 aaaagtcaaatg 38737958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 34146943 - 34146832
Alignment:
Q  57 gatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatc 156  Q
    ||||||| ||||||||||||| || | |||||||||||||||| ||| | |||||| |||| ||||||||| ||||||||||||| || |||||||||||    
T  34146943 gatcctatttataagaaaaaa-ttgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatca-ttttgtaatgaatc 34146846  T
Q  157 aaaaaagtcaaatg 170  Q
    |||||||| |||||    
T  34146845 aaaaaagttaaatg 34146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 26070857 - 26070945
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||||||||||| |||||||||| || ||||||||||| ||||||||| | ||||| |||||||||||||||| |||||    
T  26070857 actttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatcaaaaaagtaaaatg 26070945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 26924215 - 26924334
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||| ||| |||||||  ||||||||||| | | |||||  || ||||||||||||| ||||||||||| ||||  |    
T  26924215 tccctccggtcctatttataagaaaaa-gttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattca 26924313  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  26924314 atgaatcaaaaaagtcaaatg 26924334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 49944839 - 49944954
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| ||||||||||||  |||||||||| |||||||||| ||| ||||||||||  | ||||||||||| ||||||||||| ||||  |||||    
T  49944839 tccggtcctatttataagaaaaat-ttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatga 49944937  T
Q  154 atcaaaaaagtcaaatg 170  Q
    ||||||||| |||||||    
T  49944938 atcaaaaaaatcaaatg 49944954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 44939179 - 44939093
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||| |||||||||| || ||||||||||| ||||||||||| ||||  ||||||| ||||||||||||||    
T  44939179 tttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaagtcaaatg 44939093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 50155442 - 50155333
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||| ||||||| |||||||||||||| |||||||| || | || |||||||| ||||||||||| ||||| |||    
T  50155442 cctccggtcctatttataagaaaaa-gttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaat 50155344  T
Q  152 gaatcaaaaaa 162  Q
    |||| ||||||    
T  50155343 gaattaaaaaa 50155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 8971245 - 8971348
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| |||| || || |||||||||||||| | |||||| ||| ||||||||||||||||| || | | ||||| ||||||||||||||||    
T  8971245 ttataagaaaaaa-ttaagttgttagattcattgagtaattaatgtatttgacatagaatatagatcaaacacgttatttatgcaatgaatcaaaaaagt 8971343  T
Q  165 caaat 169  Q
    |||||    
T  8971344 caaat 8971348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 26760319 - 26760200
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||| || | |||||  ||||||||||| | | |||||  || ||||||||||||| ||||||||||| ||||  |    
T  26760319 tccctccggtcctatttataagaaaaaa-ttgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattca 26760221  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  26760220 atgaatcaaaaaagtcaaatg 26760200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 34332509 - 34332597
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||||||||||| |||||||| |  | ||||||||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  34332509 actttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaaaaagtcaaatg 34332597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 6661549 - 6661635
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||| ||||| | ||||||||  ||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||    
T  6661549 tttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatcaaaaaagtcaaatg 6661635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 15342961 - 15343057
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||| | ||||| ||||||||| |||| | ||||||||  | ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  15342961 aaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaaatcaaat 15343057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 15286115 - 15286036
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||| ||| | |||||  || ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  15286115 attcattgaataattaatgtacttggtatagaatatagatcaaatacatcatttatataatgaattaaaaaagtcaaatg 15286036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 29256751 - 29256634
Alignment:
Q  43 taattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcac 142  Q
    |||||| | |||||| ||||| |||||||||||| ||| ||||||| |||||||||||||| | |||| | || |||| |||| ||| |||||||||||     
T  29256751 taattacttcctccggtcctatttataagaaaaa-gttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcat 29256654  T
Q  143 ttatgtaatgaatcaaaaaa 162  Q
    ||||| ||||||||||||||    
T  29256653 ttatgcaatgaatcaaaaaa 29256634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 11386171 - 11386275
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| | |  ||||| |||||||||| ||| |||||| |||| | |||||||||||  |||||||||| ||||| |||||||| |||||||    
T  11386171 ttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatc-aaaaagt 11386269  T
Q  165 caaatg 170  Q
    ||||||    
T  11386270 caaatg 11386275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 25554570 - 25554643
Alignment:
Q  80 taacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    ||||||||| |||||||||| |||||||||||| ||||||| | |||||  ||||||||||| |||| ||||||    
T  25554570 taactttttagattcattgaataaatgatgtatgtgatatatactataggccaaatacatcagttatttaatga 25554643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 34146835 - 34146922
Alignment:
Q  79 ttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||||||||||||||||| |  ||||||||||| ||||||| | | |||||||||||||| | ||||  |||||||||||||| ||||    
T  34146835 ttaacttttttgattcatt-acaaaatgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaatcaa 34146922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 43929489 - 43929379
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  ||| ||||    
T  43929489 cctccggtcctatttataagaaaaa-gttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactatttaat 43929392  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  43929391 gaatcaaaaaagt 43929379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 23923585 - 23923665
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||| |||||||||||||| | |||||| |  | ||||||||||| ||||| ||||| ||||| ||||||||| ||||||    
T  23923585 tttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaaaagt 23923665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 34662686 - 34662796
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||||| ||| |||||| ||||||||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  34662686 cctccgattctatttataa-aaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 34662783  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  34662784 gaatcaaaaaagt 34662796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 47678399 - 47678289
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||  |||||||||  |||||||| | ||| ||||||| || |  ||||| |||||||||||||||||  |||  |||    
T  47678399 cctccggtcctatttataagaaaaat-ttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaat 47678302  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  47678301 gaatcaaaaaagt 47678289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 9387298 - 9387259
Alignment:
Q  122 aatatagatcaaatacatcacttatgtaatgaatcaaaaa 161  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  9387298 aatatagatcaaatacatcatttatgtaatgaataaaaaa 9387259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 2351130 - 2351195
Alignment:
Q  45 attattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgta 111  Q
    |||| |||||||||||||| ||||||| ||| | ||||||||||||||||||||  |||||| ||||    
T  2351130 attactccctccgatcctatttataag-aaacatttaacttttttgattcattgcataaatgttgta 2351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 26924359 - 26924298
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat 112  Q
    |||||||| ||||| |||||||||| |  || |||||||||||||||||| ||||||||||||    
T  26924359 tccctccggtcctatttataagaaacat-ttgacttttttgattcattgaataaatgatgtat 26924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 6793618 - 6793715
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||| |||||  ||||||||| ||| | |||||  |  |||| | ||||| |||||||||||| ||||| ||||||||| |||||| |||||    
T  6793618 aaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaatcataaaagttaaatg 6793715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 26760172 - 26760236
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat 112  Q
    ||||||||| | ||||| |||||||||| |  || |||||||||||||||||| ||||||||||||    
T  26760172 tattccctcgggtcctatttataagaaacat-ttgacttttttgattcattgaataaatgatgtat 26760236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 27819436 - 27819339
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatac-atcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| |||||||||| |||||||||| ||  || ||||| |  | || |||||| ||||||||  |||| ||||| |||||||||||||||||||||    
T  27819436 aaaaatttaactttttagattcattgaatatttggtgtattttgtctaaaatataaatcaaataatatcatttatgaaatgaatcaaaaaagtcaaat 27819339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 24305789 - 24305693
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| |||| |||||  ||| ||||||||| ||||||||||  ||||||||||| | |  |||||||| |||||  |||||| |||||| ||||||    
T  24305789 aaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttatgcgatgaataaaaaaaatcaaat 24305693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 47844538 - 47844648
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||  |||||||||  |||||||| | ||| ||||||| || |  ||||| |||||||||||| ||||  |||  |||    
T  47844538 cctccggtcctatttataagaaaaat-ttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatatatcaactattcaat 47844635  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  47844636 gaatcaaaaaagt 47844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 52427412 - 52427376
Alignment:
Q  132 aaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  52427412 aaatacatcatttatgcaatgaatcaaaaaagtcaaa 52427376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 44111891 - 44111772
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| || || |||||||||||| ||| ||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||||||||| |||||||    
T  44111891 tccctccggtcttatttataagaaaaa-gttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgta 44111793  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    || ||||||||||||||||||    
T  44111792 attaatcaaaaaagtcaaatg 44111772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 42670770 - 42670885
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||| | ||||||||  | ||||||||||| |||||| |||| ||||| |||||    
T  42670770 tccgatcctatttataagaaaa-agttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatga 42670868  T
Q  154 atcaaaaaagtcaaatg 170  Q
    ||| |||||||||||||    
T  42670869 atctaaaaagtcaaatg 42670885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 48361054 - 48361173
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||  || ||||||| |||||||||||||| |||||||| |  | ||||||||||| ||||||||||| ||||| |    
T  48361054 tccctccggtcctatttataagaaaaat-ttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgca 48361152  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||||    
T  48361153 atgaatcaaaaaagtcaaatg 48361173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 53225790 - 53225671
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||| || ||||||| |||||||||| ||| | |||||| || |||||||| |||| ||||||||||| ||||| |    
T  53225790 tccctccggtcctatttataagaaaaaa-ttgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgca 53225692  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||| |||||    
T  53225691 atgaatcaaaaaagtaaaatg 53225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 21554246 - 21554137
Alignment:
Q  58 atcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatca 157  Q
    |||||| |||||||||||| ||| | ||||| |||||||||||||| | |||||| |||||||||||||||| ||||||||||| ||||| ||||||||     
T  21554246 atcctatttataagaaaaa-gttgattttttagattcattgagtaattaatgtat-tgatatagaatatagaccaaatacatcatttatgcaatgaatcg 21554149  T
Q  158 aaaaagtcaaat 169  Q
    ||||||||||||    
T  21554148 aaaaagtcaaat 21554137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 48195892 - 48196011
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||| | ||||| ||||||||||||| | ||||||||  ||||||||||||| ||| ||||||  | ||||||||||| ||||||||||| ||||| |    
T  48195892 tccctctggtcctatttataagaaaaaact-aactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgca 48195990  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||||    
T  48195991 atgaaccaaaaaagtcaaatg 48196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 25477660 - 25477573
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||  ||||||||||||| |||||||| |  | ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  25477660 actttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaagtcaaat 25477573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 30191907 - 30192017
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||| || | ||||| |||||||||||||| |||||||| |  | ||||||||||| ||||||||||| ||||| ||||||||||    
T  30191907 tcctatttataagaaaaaa-ttgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 30192005  T
Q  159 aaaagtcaaatg 170  Q
    |||||| |||||    
T  30192006 aaaagttaaatg 30192017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 45828564 - 45828443
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttat 146  Q
    |||||||| || ||||| ||||||||||||| || | ||||| |||||||||||||| | |||||| || | || |||||| | ||||||||||| ||||    
T  45828564 tattcccttcggtcctatttataagaaaaaa-ttgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttat 45828466  T
Q  147 gtaatgaatcaaaaaagtcaaat 169  Q
    |||| ||||||||||| ||||||    
T  45828465 gtaaagaatcaaaaaaatcaaat 45828443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 4386160 - 4386256
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| || |||||||  ||||||| ||||| |||||||| | || || ||||||||  |||||||||| |||||||||||||||||||||||||||    
T  4386160 aaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaat 4386256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 32714411 - 32714296
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||||||||| |||||| |||||| || ||||||  |||||||| | | | |||||||| |  | |||||||||||  |||||||||| |||||||||||    
T  32714411 tccgatcctatttataaaaaaaaaattgactttta-gattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatga 32714313  T
Q  154 atcaaaaaagtcaaatg 170  Q
    |||||||||||||||||    
T  32714312 atcaaaaaagtcaaatg 32714296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 41116566 - 41116652
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacat 139  Q
    |||||| ||||| ||||||||||||  |||||||||| |||||||||||||| |||||||||| || || |||||||| |||||||||    
T  41116566 cctccggtcctatttataagaaaaat-ttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat 41116652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 42169180 - 42169070
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||  || ||||||| |||| ||||| ||| |||||||| |  | | |||||| || ||||||||||| ||||||||||||||||    
T  42169180 tcctatttataagaaaaat-ttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcatttatgtaatgaatcaa 42169082  T
Q  159 aaaagtcaaatg 170  Q
    ||||||||||||    
T  42169081 aaaagtcaaatg 42169070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 42804260 - 42804368
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||| |||||||||||| |||||||| | ||| ||||||| || || ||||| ||||| |||||||||||  ||| ||||    
T  42804260 cctccggtcctatttataagaaaa-agttaactttttagattcattcaataattgatgtacctaatttagaa-atagaccaaatacatcaactatttaat 42804357  T
Q  152 gaatcaaaaaa 162  Q
    |||||||||||    
T  42804358 gaatcaaaaaa 42804368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 8347651 - 8347766
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| ||||||||||||  || ||||||| |||||||||||| | |||||||| |  |||| |||||||| | ||||||||| ||||  |||||    
T  8347651 tccgctcctatttataagaaaaat-ttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatga 8347749  T
Q  154 atcaaaaaagtcaaatg 170  Q
    || ||||||||||||||    
T  8347750 ataaaaaaagtcaaatg 8347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 47943729 - 47943848
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    ||||| || ||||| ||||| ||||||| || ||||||| |||| ||||||||| | |||||  || |||| ||||||||  |||||||||| ||||| |    
T  47943729 tcccttcggtcctatttatatgaaaaaa-ttgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgca 47943827  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    |||||||||||| ||||||||    
T  47943828 atgaatcaaaaatgtcaaatg 47943848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 696499 - 696379
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttat 146  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||  |||| |||   ||| | ||||||||  | |||||||||||  |||| ||||| ||||    
T  696499 tattccctccggtcctatttataagaaaaa-gttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttat 696401  T
Q  147 gtaatgaatcaaaaaagtcaaa 168  Q
    | ||||||||||||||||||||    
T  696400 gcaatgaatcaaaaaagtcaaa 696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 764797 - 764677
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttat 146  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||  |||| |||   ||| | ||||||||  | |||||||||||  |||| ||||| ||||    
T  764797 tattccctccggtcctatttataagaaaaa-gttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttat 764699  T
Q  147 gtaatgaatcaaaaaagtcaaa 168  Q
    | ||||||||||||||||||||    
T  764698 gcaatgaatcaaaaaagtcaaa 764677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 3162912 - 3163016
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| || |||||||  |||||||| |||| | || |||||  | |||||||||||   ||||||||| ||||| ||||||||||||||||    
T  3162912 ttataagaaaaaa-ttgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatcaaaaaagt 3163010  T
Q  165 caaatg 170  Q
    ||||||    
T  3163011 caaatg 3163016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 16412238 - 16412354
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| | ||| ||||||||||||| || ||||||| |||||||||| ||| |||| ||| || | ||||||||||| ||||||||| | ||||| |||    
T  16412238 cctccggttctatttataagaaaaaa-ttgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaat 16412336  T
Q  152 gaatcaaaaaagtcaaat 169  Q
    |  ||||| |||||||||    
T  16412337 gtgtcaaagaagtcaaat 16412354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 43020759 - 43020870
Alignment:
Q  51 ccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaa 150  Q
    ||||||| ||||| ||||||||||| |||||||||||| |||||||| | ||| ||||||| || |  ||||| ||||| |||||||||||  |||  ||    
T  43020759 ccctccggtcctatttataagaaaa-agttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaa 43020856  T
Q  151 tgaatcaaaaaagt 164  Q
    ||||||||||||||    
T  43020857 tgaatcaaaaaagt 43020870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 43117985 - 43117889
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    ||||||||||||| || | |||||  ||||||||| ||| |||||||| || |||| |||||||| ||||||||||| ||||| ||| ||||||||||    
T  43117985 ttataagaaaaaa-ttgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatcaaaaaa 43117889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 25700486 - 25700566
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    ||||||| |||||||| |||||||||||||| |||| || |||||||| || |||||||| ||||  |||||||| |||||    
T  25700486 actttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatctaaaaa 25700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 36132766 - 36132663
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| || ||||||  ||| |||||||||  ||||||||||  | | |||||||||  |||||||||| ||||  ||||||||||||||||    
T  36132766 ttataagaaaaaa-ttgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaaaaagt 36132668  T
Q  165 caaat 169  Q
    |||||    
T  36132667 caaat 36132663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 35429880 - 35429801
Alignment:
Q  90 gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||| ||||||||| ||||||||||  | ||||||||||| ||||||||||  ||||| || |||| |||||||||||||    
T  35429880 gattaattgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaataaaaaaagtcaaat 35429801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 26066410 - 26066484
Alignment:
Q  90 gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    |||||||||| ||| ||||||||| | | ||||||||||| || |||||||| |||| ||||||||| |||||||    
T  26066410 gattcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatctaaaaagt 26066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 45096609 - 45096695
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||| ||||| ||| ||||||||||  | |||| |||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  45096609 tttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatg 45096695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 9044500 - 9044415
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| |||| ||||||||| |||||||| |  | ||||||||||  |||| |||||| ||||  |||||||||||||||||||||    
T  9044500 tttttggatttattgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaaagtcaaat 9044415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 19150791 - 19150844
Alignment:
Q  117 tatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||| ||||||||||| ||||| |||||||| ||||||| |||||    
T  19150791 tatagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatg 19150844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 50121461 - 50121558
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| || ||||||| |||| ||||| | | ||||||||||  | ||| ||||||| |||||| |||| ||||| ||||||| ||||||||||||||    
T  50121461 aaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatgaattaaaaaagtcaaatg 50121558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 9894630 - 9894717
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatca 141  Q
    ||||| ||||| |||||||||||| ||| ||||||| ||||||||  || | | ||||||||  | |||||||||||||||||||||||    
T  9894630 ctccggtcctatttataagaaaaa-gttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacatca 9894717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 17284827 - 17284763
Alignment:
Q  105 tgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||||||  | ||||||||||| || |||||||| ||||| |||||||||||||| ||||||    
T  17284827 tgatgtatcttgtctagaatatagaccacatacatcatttatgcaatgaatcaaaaaaatcaaat 17284763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 20459384 - 20459274
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  20459384 cctccggtcctatttataagaaaaa-gttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 20459287  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  20459286 gaatcaaaaaagt 20459274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 47866040 - 47866150
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||| |||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  47866040 cctccggtcctatttataagaaaa-agttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaat 47866137  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  47866138 gaatcaaaaaagt 47866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 55951777 - 55951690
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||| |||| ||||| ||| | ||||||||  | | ||||||| ||||||||||||| |||| ||| |||| |||||||||||||    
T  55951777 actttttagatttattgattaattaatgtatcttgtcttgaatataaatcaaatacatcatttatataacgaattaaaaaagtcaaat 55951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 20745473 - 20745365
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| |||||||||||| ||||| ||||| |||||||| | ||| ||||||| ||    ||||| |||||||||||||||||  |||  |||||    
T  20745473 tccggtcctatttataagaaaaa-gttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatga 20745376  T
Q  154 atcaaaaaagt 164  Q
    |||||||||||    
T  20745375 atcaaaaaagt 20745365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 24100756 - 24100824
Alignment:
Q  45 attattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||| |||||||||||||  |||||||||| || |||||||||| |||||||||| ||| | ||||||||    
T  24100756 attactccctccgatccttattataagaaataa-ttaactttttagattcattgaataattaatgtatct 24100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 44061466 - 44061417
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    ||||||||||| ||||||||| | ||||| |||||||||||||| |||||    
T  44061466 tagaatatagaccaaatacattatttatgcaatgaatcaaaaaactcaaa 44061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 16448913 - 16448816
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||| |||||||||||||| |||||||||| |||||||||||| | |||||| |||| ||||| ||||||||||||||||||||||    
T  16448913 aaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaagtcaaatg 16448816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 5031468 - 5031585
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||  ||||||||||  ||||||| ||||| ||||||||||  | |||||||||||  |||||||||| ||||| |||    
T  5031468 cctccggtcctatttataagaaaaat-ttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaat 5031566  T
Q  152 gaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||||    
T  5031567 gaatcaaaaaagtcaaatg 5031585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 7693175 - 7693060
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| ||||||||||||| || ||||||| |||||||||||||| | |||||| || |||| ||||||||  |||||||||| ||||| |||||    
T  7693175 tccggtcctatttataagaaaaaa-ttgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatga 7693077  T
Q  154 atcaaaaaagtcaaatg 170  Q
    ||||||||||| |||||    
T  7693076 atcaaaaaagtaaaatg 7693060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 15720210 - 15720320
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||| |||||||||| || | || |||||| |||||||| || |||| |||||||||||||||||| | ||||| ||||||||||    
T  15720210 tcctatttataagaaaaaa-ttaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacattatttatggaatgaatcaa 15720308  T
Q  159 aaaagtcaaatg 170  Q
    |||||| |||||    
T  15720309 aaaagttaaatg 15720320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 10184695 - 10184579
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    ||||||||| || ||||||||||||| |  ||||||| |||||||||| ||| |||||||| ||||  |||||||||| ||||||||||| ||||  |||    
T  10184695 cctccgatcatatttataagaaaaaa-tcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaat 10184597  T
Q  152 gaatcaaaaaagtcaaat 169  Q
    |||| |||||||||||||    
T  10184596 gaataaaaaaagtcaaat 10184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 42123091 - 42122995
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    |||||| || ||||||| |||||||||||||| | ||||||||  | ||||||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  42123091 aaaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaa 42122995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 24619070 - 24618987
Alignment:
Q  85 tttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    |||| |||||||||||||| | |||||  || ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  24619070 ttttagattcattgagtaattaatgtacttgttatagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaa 24618987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 10839774 - 10839875
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||| || ||||||| |||||||||| ||| | |||||  || ||||||||||||| ||||||||||| ||||| ||||||||||    
T  10839774 tcctatttataagaaaaaa-ttgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatcaa 10839872  T
Q  159 aaa 161  Q
    |||    
T  10839873 aaa 10839875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 8453737 - 8453622
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||||||||| ||||||||||||  || | ||||| ||| |||||||||| |||| |||||  | |||||||||||| |||||||| | ||||||||||    
T  8453737 ctccgatcctatttataagaaaaat-ttgattttttagatacattgagtaattgatatatcttgtctagaatatagat-aaatacattatttatgtaatg 8453640  T
Q  153 aatcaaaaaagtcaaatg 170  Q
    |||||||||| |||||||    
T  8453639 aatcaaaaaattcaaatg 8453622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 8793755 - 8793839
Alignment:
Q  85 tttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||| |||||||||||||| |||||||| || | || ||||||||  |||||||||| ||||| |||||||||||||||||||||    
T  8793755 ttttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaat 8793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 8803252 - 8803348
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||||||||||||  ||| |||  |||| | ||||||||  | ||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  8803252 aaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatcaaaaaagttaaat 8803348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 35149814 - 35149695
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    ||||| || ||||| |||||||||||| ||| | ||||| |||| |||| |||| | ||||||||  | ||||||||||| ||||||||||| ||||| |    
T  35149814 tcccttcggtcctatttataagaaaaa-gttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgca 35149716  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    || ||||||||||||||||||    
T  35149715 attaatcaaaaaagtcaaatg 35149695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 32597622 - 32597525
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||   ||||||||||||| | |||||  || |||| ||||||||  |||||||||  ||| | ||||||||||||||||||||||    
T  32597622 aaaaagttaacttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatcaaaaaagtcaaatg 32597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 40483407 - 40483311
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| || |||||||  ||| ||||||||| |||| ||||| || |||||||| || ||||||||||| ||||| ||||||| |||||||| ||||    
T  40483407 aaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaattaaaaaagttaaat 40483311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 27789314 - 27789385
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaat 155  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||| || ||||||||||| ||||  |||||||    
T  27789314 ttttttgattcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaat 27789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 1223125 - 1223242
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| || || |||||||||||||| | ||||||| ||||||||| |||| | ||||||||  |  | |||||||| ||||||||| | ||||| |    
T  1223125 tccctccggtcatatttataagaaaaaag-tgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttatgca 1223223  T
Q  150 atgaatcaaaaaagtcaaa 168  Q
    |||||| |||| |||||||    
T  1223224 atgaattaaaatagtcaaa 1223242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 12958782 - 12958890
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||||||||| ||||||||||| |||||||||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||||    
T  12958782 tccgatcctatttataagaaaa-agttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatga 12958879  T
Q  154 atcaaaaaagt 164  Q
    |||||||||||    
T  12958880 atcaaaaaagt 12958890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 3236329 - 3236450
Alignment:
Q  45 attattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcactt 144  Q
    |||| ||||||||||| || ||||  ||||||| || |||||||  ||||||||| ||| ||||||||||  | || ||| |||| ||||||||||| ||    
T  3236329 attactccctccgatcttatttat--gaaaaaa-ttgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcattt 3236425  T
Q  145 atgtaatgaatcaaaaaagtcaaat 169  Q
    ||  ||||||| |||||||||||||    
T  3236426 atacaatgaattaaaaaagtcaaat 3236450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 6899424 - 6899534
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| ||||||||||||  |||||||||  |||||||| | ||| ||||||| || |  ||||| |||||||||||||||||  |||  |||    
T  6899424 cctccggtcctatttataagaaaaat-ttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaat 6899521  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  6899522 gaatcaaaaaagt 6899534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 24915311 - 24915205
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| ||||| ||||||| |||||||||| |||||||| | ||| ||||||||||    ||||| |||||  |||||||||| |||| ||||||    
T  24915311 tccggtcctatttatatgaaaaaa-ttaactttttagattcattaaataattgatgtatctagcttagaa-atagacaaaatacatcaattatttaatga 24915214  T
Q  154 atcaaaaaa 162  Q
    |||||||||    
T  24915213 atcaaaaaa 24915205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 4156385 - 4156446
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||| |||||| ||||||||||||| || |||| || ||| |||||||||| ||||||||||    
T  4156385 ctccaatcctatttataagaaaaaaattgacttgttagatacattgagtaattgatgtatct 4156446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 8803372 - 8803313
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat 112  Q
    |||||||||||| |||||| |||| | |||||||||||||||||||   ||||||||||||    
T  8803372 cctccgatcctatttataa-aaaatatttaacttttttgattcattacataaatgatgtat 8803313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 15726900 - 15726853
Alignment:
Q  55 ccgatcctacttataagaaaaaagttaacttttttgattcattgagtaa 103  Q
    ||||||||| ||||||||||||| || ||||||| ||||||||||||||    
T  15726900 ccgatcctatttataagaaaaaa-ttgactttttagattcattgagtaa 15726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 22193690 - 22193619
Alignment:
Q  66 tataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaataca 138  Q
    |||||||||||| || ||||||| ||||||||||  || ||||||||||||  || ||||||||||| |||||    
T  22193690 tataagaaaaaa-ttcactttttagattcattgaacaactgatgtatctgaattataatatagatcagataca 22193619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 34711104 - 34711196
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    |||||| || ||||||| |||||||||||||| |||||||| |  | || |||||| |  |||||||||| | ||| ||| ||||||||||||    
T  34711104 aaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaaaaaagt 34711196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 36191852 - 36191775
Alignment:
Q  90 gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||||| ||| ||||||||||  |||| ||||||   ||||||||||| ||||| ||||||  |||||||||||||    
T  36191852 gattcattgaataattgatgtatcttgtataaaatatac--caaatacatcatttatgcaatgaaagaaaaaagtcaaat 36191775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 36366168 - 36366058
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||||| ||||| |||||||| | ||| ||||||| ||    ||||| ||||| |||||||||||  |||  |||    
T  36366168 cctccggtcctatttataagaaaaa-gttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaat 36366071  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  36366070 gaatcaaaaaagt 36366058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 38394430 - 38394549
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||||||||| ||||||||||||| || ||||||| |||||||||| ||| | |||||  || |||||||| |||| ||||||||||| ||||| |    
T  38394430 tccctccgatcctatttataagaaaaaa-ttgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgca 38394528  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||| |||||    
T  38394529 atgaatcaaaaaagtaaaatg 38394549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 919754 - 919670
Alignment:
Q  85 tttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||| |||||||||||||| ||||||||||  ||||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaat 919670  T

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Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 18473508 - 18473596
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||||||||||| ||||||||||  | ||||||||||||||||| ||||| ||||  ||||||||||||||||||||||    
T  18473508 actttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaaaaagtcaaatg 18473596  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 5002283 - 5002167
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatg 152  Q
    ||||| ||||| |||||||||||   ||| |||||| |||| ||||||||| ||||||||||  | || |||||||||||||||||||| ||||| |||     
T  5002283 ctccgctcctatttataagaaaattttta-ctttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaatt 5002185  T
Q  153 aatcaaaaaagtcaaatg 170  Q
    ||||||||||||||||||    
T  5002184 aatcaaaaaagtcaaatg 5002167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 11931971 - 11932083
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||| || ||||||| ||||||||| |||| | ||||||||  | || |||||||| ||||||||||| |||| ||    
T  11931971 tccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttatata 11932070  T
Q  150 atgaatcaaaaaa 162  Q
    || ||||||||||    
T  11932071 ataaatcaaaaaa 11932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 33478142 - 33478228
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||| |||||||||||||| ||||||||||  | ||||||||||  ||||||||||| ||||| ||||||||||||| ||||||||    
T  33478142 tttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatg 33478228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 34297323 - 34297202
Alignment:
Q  50 tccctccgatcctacttataagaaaaa--agttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatg 147  Q
    |||||||||||||| |||||| |||||  | || ||||||| |||||||| ||||| |||||| |||  | || |||||||||||| ||||||| |||||    
T  34297323 tccctccgatcctatttataaaaaaaataaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatttatg 34297224  T
Q  148 taatgaatcaaaaaagtcaaat 169  Q
     ||||||| |||||||||||||    
T  34297223 caatgaattaaaaaagtcaaat 34297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 13789878 - 13789759
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| | ||| |||||||||||| ||| ||||||  |||||||||| ||| | |||||  || |||||||| |||| ||||||||||| ||||| |    
T  13789878 tccctccggttctatttataagaaaaa-gttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgca 13789780  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||| |||||    
T  13789779 atgaatcaaaaaagtaaaatg 13789759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 36434802 - 36434706
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| |||||||||| |||||||| ||||| ||||||||||  | || |||||| | |||||| |||| ||||||||||||| |||||| ||||||    
T  36434802 aaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaatatatcatttatgtaatgaataaaaaaaatcaaat 36434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 21488429 - 21488311
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||||||||| |||||||||||| ||||| |||||  | |||||  |||| | |||||| |  | ||||||||||| ||||||||| | ||||| |    
T  21488429 tccctccgatcctatttataagaaaaa-gttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatgca 21488331  T
Q  150 atgaatcaaaaaagtcaaat 169  Q
    |||||| |||||||||||||    
T  21488330 atgaattaaaaaagtcaaat 21488311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 39239811 - 39239909
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaag 163  Q
    ||||||||||||| ||  |||||| ||||||||| |||| | ||||||||  ||| |||||||||||||||| || | ||||| ||||||| |||||||    
T  39239811 ttataagaaaaaaattgtctttttagattcattgtgtaattaatgtatcttgtattgaatatagatcaaatatattatttatgcaatgaataaaaaaag 39239909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 36286174 - 36286089
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaa 167  Q
    ||||||| |||| ||||||||| |||||||||   | ||||||||||| ||| ||||||| ||||| |||||||||||||| ||||    
T  36286174 actttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaaaatcaa 36286089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 18391573 - 18391525
Alignment:
Q  122 aatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  18391573 aatatagatcaaatacattatttatgcaatgaatcaaaaaagtcaaatg 18391525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 13665024 - 13664973
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||    
T  13665024 tagaatatagatcaaatacatcatttatgcaattaattaaaaaagtcaaatg 13664973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 14723409 - 14723476
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacat 139  Q
    |||||| ||||||||||  ||||||||||||| |||| ||||| || ||||||||||| |||||||||    
T  14723409 aaaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacat 14723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 19296083 - 19295986
Alignment:
Q  72 aaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaat-acatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    ||||||||| ||||||| |||||||||||||| | |||||  || ||||||| ||| | ||||| |||||| ||||  |||||||||||||| |||||    
T  19296083 aaaaaagttgactttttagattcattgagtaactaatgtacttggtatagaagatataccaaataacatcatttatccaatgaatcaaaaaaatcaaa 19295986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 22101943 - 22102028
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||| ||||||||| |||| | ||||||||  | || |||||||||||||||||| | ||||  ||| |||||||||||||||||    
T  22101943 tttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaaagtcaaat 22102028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 29299359 - 29299479
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| ||||||||||||  || | ||||| |||||||||||| | |||||||| |  | || |||||||| | ||||||||| ||||  |    
T  29299359 tccctccggtcctatttataagaaaaat-ttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttataca 29299457  T
Q  150 atgaa-tcaaaaaagtcaaatg 170  Q
    ||||| ||||||||||||||||    
T  29299458 atgaattcaaaaaagtcaaatg 29299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 14913248 - 14913141
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||||||||| ||||||||||||  || | |||||  ||||||||||||| | || ||| ||||||| |||||||| ||||||||| | | | | |||||    
T  14913248 tccgatcctatttataagaaaaat-ttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacattattcaggcaatga 14913150  T
Q  154 atcaaaaaa 162  Q
    |||||||||    
T  14913149 atcaaaaaa 14913141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 26327539 - 26327650
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| || || ||||||||||||| |||||||||| |||||||| | ||| ||||||| || || || || ||||| |||||||||||  |||  |||    
T  26327539 cctccggtcttatttataagaaaaaaattaactttttagattcattcaataattgatgtacctaatcta-aaaatagaccaaatacatcaactattcaat 26327637  T
Q  152 gaatcaaaaaagt 164  Q
     ||||||||||||    
T  26327638 aaatcaaaaaagt 26327650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 29031188 - 29031070
Alignment:
Q  44 aattattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcact 143  Q
    ||||| |||||||| ||||| |||||||||||| ||||||||||| |||||||| |  || ||||||| ||    ||||| ||||| |||||||||||      
T  29031188 aattactccctccggtcctatttataagaaaaa-gttaactttttagattcattcaacaattgatgtacctagcctagaa-atagaccaaatacatcaac 29031091  T
Q  144 tatgtaatgaatcaaaaaagt 164  Q
    |||  ||||||||||||||||    
T  29031090 tattcaatgaatcaaaaaagt 29031070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 1015301 - 1015189
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| | ||| |||||||||||| ||||||||||| |||||||| | |||  |||||| || |  ||||| ||||| |||||||||||  |||  |    
T  1015301 tccctccggttctatttataagaaaaa-gttaactttttagattcattcaataatcgatgtacctaacttagaa-atagaccaaatacatcaactattca 1015204  T
Q  150 atgaatcaaaaaagt 164  Q
    |||||||||||||||    
T  1015203 atgaatcaaaaaagt 1015189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 1248885 - 1248942
Alignment:
Q  105 tgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    ||||||||||  | ||||||||||||||||||||||| ||||  ||||||| ||||||    
T  1248885 tgatgtatcttgtctagaatatagatcaaatacatcatttatcaaatgaataaaaaaa 1248942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 27488346 - 27488461
Alignment:
Q  47 tattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttat 146  Q
    |||| |||||| ||||| ||||||||||||| |||| ||||| |||||||| | ||| ||||||||||    ||||| ||||| |||||| ||||  |||    
T  27488346 tattacctccggtcctatttataagaaaaaa-ttaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactat 27488443  T
Q  147 gtaatgaatcaaaaaagt 164  Q
      ||||||||||||||||    
T  27488444 tgaatgaatcaaaaaagt 27488461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 14221920 - 14221872
Alignment:
Q  122 aatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| |||||||| |||| ||||| ||| ||||||||||||||||||    
T  14221920 aatataaatcaaatatatcatttatgcaattaatcaaaaaagtcaaatg 14221872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 15968315 - 15968425
Alignment:
Q  52 cctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    |||||| ||||| |||||||||||| ||||| ||||| |||||||| | ||| | ||||||||    ||||| ||||| |||||||||||  |||  |||    
T  15968315 cctccggtcctatttataagaaaaa-gttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaat 15968412  T
Q  152 gaatcaaaaaagt 164  Q
    |||||||||||||    
T  15968413 gaatcaaaaaagt 15968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 20502237 - 20502170
Alignment:
Q  46 ttattccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||||||||||| ||||  |||||||||| || |||| ||||||| ||||||| |||| ||||||||||    
T  20502237 ttattccctccggtccttattataagaaacaa-ttaatttttttggttcattgtgtaagtgatgtatct 20502170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 29002744 - 29002807
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||||||||||||  |||||||||| || || ||||||||| ||||||| |||| ||||||||||    
T  29002744 tccctccgatccttgttataagaaacaa-ttgacttttttggttcattgtgtaagtgatgtatct 29002807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 38978888 - 38978825
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatct 114  Q
    |||||||||||||  |||||||||| || |||| ||||||| ||||||| |||| ||||||||||    
T  38978888 tccctccgatccttattataagaaacaa-ttaatttttttggttcattgtgtaagtgatgtatct 38978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 12999902 - 12999782
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaactttttt-gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgt 148  Q
    ||||||||||| || ||||||| |||| ||| |||||||  |||||||||||||| | |||||  || ||||||||||||||||||||||||  |||||     
T  12999902 tccctccgatcttatttataagtaaaa-gttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatcttttatgc 12999804  T
Q  149 aatgaatcaaaaaagtcaaatg 170  Q
    |||||||||||||||| |||||    
T  12999803 aatgaatcaaaaaagttaaatg 12999782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 12450381 - 12450471
Alignment:
Q  79 ttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||||| |||||||||| ||| |||||||| | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||||    
T  12450381 ttaactttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaattaaaaaagtcaaat 12450471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 28630759 - 28630871
Alignment:
Q  54 tccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatga 153  Q
    |||| ||||| ||||||||||||  || |||||||| ||||||||||||| ||||||||||  | || |||||||| ||||||||| | ||||| |||||    
T  28630759 tccggtcctatttataagaaaaat-ttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatga 28630857  T
Q  154 atcaaaaaagtcaa 167  Q
    ||| ||||||||||    
T  28630858 atctaaaaagtcaa 28630871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 27909007 - 27909096
Alignment:
Q  82 acttttttgattca-ttgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||||| |||||||| ||||||||| | | || |||||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  27909007 actttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatg 27909096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 3064900 - 3065003
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagt 164  Q
    ||||||||||||| ||| |||||| |||||||||  ||| | ||||||||  |||| |||||||| |||||||| || ||||| ||||||||||||||||    
T  3064900 ttataagaaaaaa-ttatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaaagt 3064998  T
Q  165 caaat 169  Q
     ||||    
T  3064999 aaaat 3065003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 17265827 - 17265748
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||| |||||| ||||||||||  | |||||||||||  |||||| ||| ||||| ||||||||||||||||||||||    
T  17265827 attcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaagtcaaatg 17265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 30627869 - 30627944
Alignment:
Q  95 attgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||| ||||||||||  | || |||||||| ||||||||||| ||||| ||||||||| ||||||||||||    
T  30627869 attgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcagaaaagtcaaatg 30627944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 30895252 - 30895305
Alignment:
Q  117 tatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||    
T  30895252 tatagaatatagaccaaatatatcatttatgcaatgaatcaaaaaagtcaaatg 30895305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 2972197 - 2972285
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||| |||| ||||||||| || ||||||| || || ||||||||  |||||||||| ||||| ||||||||||||| ||| ||||    
T  2972197 actttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatcaaaaacgtctaatg 2972285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 2230495 - 2230382
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| ||||| |||||||||||   || ||||||| |||||||||||||| | ||||||||  | ||||||||||| ||| ||||||| ||||  |    
T  2230495 tccctccggtcctatttataagaaaact-ttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttattca 2230397  T
Q  150 atgaatcaaaaaagt 164  Q
    | ||||||| |||||    
T  2230396 acgaatcaataaagt 2230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 9077656 - 9077706
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    ||||||||||| ||||| ||||| ||||| |||||||||||||||||||||    
T  9077656 tagaatatagaccaaatgcatcatttatgcaatgaatcaaaaaagtcaaat 9077706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 10283437 - 10283322
Alignment:
Q  53 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtat-ctgatatagaatatagatcaaatacatcacttatgtaat 151  Q
    ||||| ||||| ||||||| ||||| |||| |||||  ||| ||||||||| |||||||| ||| | || |||||| ||||||||||||| ||||   ||    
T  10283437 ctccggtcctatttataagcaaaaa-ttaattttttaaatttattgagtaattgatgtatactg-tctaaaatatatatcaaatacatcatttataccat 10283340  T
Q  152 gaatcaaaaaagtcaaat 169  Q
    ||||||||||||||||||    
T  10283339 gaatcaaaaaagtcaaat 10283322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 15467676 - 15467597
Alignment:
Q  90 gattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaat 169  Q
    |||||||| | | |||||||||| |||| || ||||||||||| |||||||| | ||  |||||||| ||||||||||||    
T  15467676 gattcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataattaaatgaatctaaaaagtcaaat 15467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 8646824 - 8646712
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||||||||| |||||||| |||||||| |||||| |||| ||| | ||| ||||||| || |  ||||| ||||| ||||| |||||  |||  |    
T  8646824 tccctccgatcctatttataaga-aaaagttatctttttagatttatttaataattgatgtacctaacttagaa-atagaccaaatgcatcaactattca 8646727  T
Q  150 atgaatcaaaaaagt 164  Q
    |||||||||||||||    
T  8646726 atgaatcaaaaaagt 8646712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 3673883 - 3673826
Alignment:
Q  82 acttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacat 139  Q
    ||||||| |||||||| | |||||||||||| ||||||| ||||| ||||| ||||||    
T  3673883 actttttagattcattcaataaatgatgtatatgatatataatatggatcacatacat 3673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 3046686 - 3046734
Alignment:
Q  122 aatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    |||||||| || |||||||| ||| ||||||||| ||||||||||||||    
T  3046686 aatatagaccacatacatcatttaagtaatgaattaaaaaagtcaaatg 3046734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 1678 - 1560
Alignment:
Q  50 tccctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgta 149  Q
    |||||||| || || ||||||||||||| |||| ||||| |||||||||| ||| ||||||||  | | |||| |||||||||||| ||||| ||||| |    
T  1678 tccctccggtcttatttataagaaaaaa-ttaattttttagattcattgaataattgatgtattag-tctagagtatagatcaaatgcatcatttatgca 1581  T
Q  150 atgaatcaaaaaagtcaaatg 170  Q
    | |||||||||||||||||||    
T  1580 acgaatcaaaaaagtcaaatg 1560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 16757 - 16678
Alignment:
Q  91 attcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||| ||||||||||  | ||||||||||| |||||||||   ||||| ||||||||||||||||||||||    
T  16757 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatattttatgcaatgaatcaaaaaagtcaaatg 16678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 16553 - 16648
Alignment:
Q  73 aaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaa 168  Q
    ||||| ||||||||||| ||||||||||||| ||||| ||||    ||||||||||| ||||||||| | ||||  ||||||||||||||||||||    
T  16553 aaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaaaagtcaaa 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 2539 - 2609
Alignment:
Q  84 ttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaa 154  Q
    ||||| |||||||||||||| | |||||| |||||||||||||||||||||||||||  ||||| ||||||    
T  2539 tttttagattcattgagtaattaatgtatttgatatagaatatagatcaaatacatcgtttatgcaatgaa 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 40162 - 40266
Alignment:
Q  65 ttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatca-cttatgtaatgaatcaaaaaag 163  Q
    ||||||| ||||| |||||| ||| ||||||||  |||| |||||||||||||||| |||||||| |||||||||||  ||||| ||||||| ||||||     
T  40162 ttataaggaaaaa-ttaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacatcattttatggaatgaattaaaaaaa 40260  T
Q  164 tcaaat 169  Q
    ||||||    
T  40261 tcaaat 40266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 1507 - 1557
Alignment:
Q  119 tagaatatagatcaaatacatcacttatgtaatgaatcaaaaaagtcaaatg 170  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  1507 tagaatatagatcaaatacatcatttatg-catgaatcaaaaaagtcaaatg 1557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 156905 - 156795
Alignment:
Q  59 tcctacttataagaaaaaagttaacttttttgattcattgagtaaatgatgtatctgatatagaatatagatcaaatacatcacttatgtaatgaatcaa 158  Q
    ||||| ||||||||||||| |  | ||||| | |||||||||||| | |||||  || ||||||||||||| |||||| |||  ||||| ||||||| ||    
T  156905 tcctatttataagaaaaaa-tagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaattaa 156807  T
Q  159 aaaagtcaaatg 170  Q
    |||||| |||||    
T  156806 aaaagttaaatg 156795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 28164 - 28124
Alignment:
Q  122 aatatagatcaaatacatcacttatgtaatgaatcaaaaaa 162  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  28164 aatatagatcaaatacatcatttatgcaatgaatcacaaaa 28124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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