View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19318_high_9 (Length: 309)

Name: NF19318_high_9
Description: NF19318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19318_high_9
NF19318_high_9
[»] chr5 (11 HSPs)
chr5 (1-301)||(22750949-22751249)
chr5 (10-253)||(38144532-38144773)
chr5 (10-245)||(28370058-28370291)
chr5 (10-245)||(19512204-19512438)
chr5 (39-258)||(23528478-23528695)
chr5 (184-245)||(18407947-18408008)
chr5 (184-245)||(23111203-23111264)
chr5 (193-245)||(22438751-22438803)
chr5 (194-245)||(19236900-19236951)
chr5 (196-245)||(22461158-22461207)
chr5 (196-245)||(22467782-22467831)
[»] chr7 (24 HSPs)
chr7 (1-301)||(18873168-18873468)
chr7 (1-245)||(15167983-15168227)
chr7 (1-244)||(10895795-10896038)
chr7 (10-252)||(14422802-14423043)
chr7 (1-253)||(12709839-12710091)
chr7 (1-253)||(13122910-13123162)
chr7 (10-245)||(16009395-16009628)
chr7 (9-253)||(13743526-13743768)
chr7 (39-253)||(12590639-12590851)
chr7 (135-253)||(13007374-13007491)
chr7 (80-245)||(16677180-16677347)
chr7 (80-245)||(17651416-17651583)
chr7 (193-245)||(11382874-11382926)
chr7 (193-245)||(11389351-11389403)
chr7 (193-245)||(20311055-20311107)
chr7 (193-245)||(21230963-21231015)
chr7 (185-245)||(13679485-13679545)
chr7 (194-245)||(2971254-2971305)
chr7 (194-245)||(11311059-11311110)
chr7 (194-245)||(20906465-20906516)
chr7 (192-243)||(46625961-46626012)
chr7 (213-253)||(831629-831669)
chr7 (213-253)||(1196809-1196849)
chr7 (213-253)||(34958578-34958618)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-253)||(11846-12098)
scaffold0026 (10-245)||(111504-111737)
[»] chr3 (22 HSPs)
chr3 (1-245)||(14762761-14763005)
chr3 (1-245)||(38310803-38311047)
chr3 (16-245)||(20247792-20248021)
chr3 (10-245)||(9534146-9534379)
chr3 (9-245)||(24192771-24193008)
chr3 (10-245)||(23370509-23370743)
chr3 (13-245)||(55499105-55499337)
chr3 (135-245)||(24933832-24933941)
chr3 (167-253)||(41455093-41455178)
chr3 (109-253)||(16801463-16801606)
chr3 (187-245)||(18929239-18929297)
chr3 (184-245)||(17240516-17240577)
chr3 (194-245)||(13302244-13302295)
chr3 (194-245)||(13323791-13323842)
chr3 (194-245)||(12033448-12033499)
chr3 (194-245)||(13312900-13312951)
chr3 (194-245)||(17131732-17131783)
chr3 (194-245)||(51301589-51301640)
chr3 (135-245)||(10389447-10389557)
chr3 (135-245)||(10414536-10414646)
chr3 (135-245)||(10421206-10421316)
chr3 (192-245)||(16801027-16801080)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-253)||(987-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-253)||(49988-50238)
[»] chr6 (24 HSPs)
chr6 (15-245)||(23057760-23057990)
chr6 (1-253)||(29614142-29614394)
chr6 (10-245)||(23839016-23839250)
chr6 (10-245)||(10986184-10986418)
chr6 (10-253)||(18800255-18800497)
chr6 (13-245)||(4477678-4477909)
chr6 (116-253)||(930091-930227)
chr6 (1-245)||(21565215-21565458)
chr6 (135-253)||(12168305-12168422)
chr6 (135-253)||(19287214-19287331)
chr6 (135-253)||(19785865-19785982)
chr6 (135-253)||(19878398-19878515)
chr6 (135-253)||(19884174-19884291)
chr6 (166-245)||(34639990-34640069)
chr6 (166-245)||(34646664-34646743)
chr6 (135-245)||(25469708-25469816)
chr6 (193-241)||(24512851-24512899)
chr6 (196-245)||(9187498-9187547)
chr6 (192-245)||(25348486-25348539)
chr6 (192-245)||(25598643-25598696)
chr6 (192-245)||(25397172-25397225)
chr6 (192-245)||(2286770-2286823)
chr6 (192-245)||(19471338-19471391)
chr6 (184-245)||(31252413-31252474)
[»] scaffold0029 (1 HSPs)
scaffold0029 (29-253)||(111717-111942)
[»] chr4 (12 HSPs)
chr4 (1-253)||(8045828-8046079)
chr4 (1-253)||(11847915-11848173)
chr4 (135-245)||(53483646-53483756)
chr4 (193-245)||(15408139-15408191)
chr4 (192-245)||(8834895-8834948)
chr4 (192-245)||(13888641-13888694)
chr4 (194-245)||(14486661-14486712)
chr4 (192-243)||(22724691-22724742)
chr4 (192-245)||(15245215-15245268)
chr4 (192-243)||(15308120-15308171)
chr4 (194-243)||(27906266-27906315)
chr4 (213-253)||(15747552-15747592)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-253)||(746-998)
[»] scaffold0117 (2 HSPs)
scaffold0117 (2-253)||(1893-2143)
scaffold0117 (2-253)||(8570-8820)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-245)||(14399-14635)
[»] chr8 (14 HSPs)
chr8 (10-245)||(44477441-44477674)
chr8 (10-245)||(44492599-44492832)
chr8 (1-245)||(8727736-8727980)
chr8 (1-253)||(23866422-23866674)
chr8 (10-157)||(27940946-27941091)
chr8 (135-245)||(17054533-17054642)
chr8 (192-303)||(18614271-18614382)
chr8 (184-245)||(23482056-23482117)
chr8 (192-245)||(39364919-39364972)
chr8 (194-245)||(29643389-29643440)
chr8 (193-245)||(14056567-14056619)
chr8 (193-245)||(25111976-25112028)
chr8 (194-245)||(24320674-24320725)
chr8 (192-245)||(21931696-21931749)
[»] chr2 (15 HSPs)
chr2 (10-245)||(19661457-19661690)
chr2 (10-245)||(6483536-6483769)
chr2 (10-245)||(6487003-6487236)
chr2 (80-253)||(26583715-26583886)
chr2 (1-245)||(23878817-23879059)
chr2 (1-245)||(23089058-23089301)
chr2 (1-245)||(23101466-23101709)
chr2 (135-245)||(5706027-5706137)
chr2 (184-245)||(23265133-23265194)
chr2 (184-245)||(23280201-23280262)
chr2 (187-245)||(21908353-21908411)
chr2 (192-245)||(24661576-24661629)
chr2 (194-245)||(10577-10628)
chr2 (194-245)||(25180933-25180984)
chr2 (145-245)||(26885133-26885233)
[»] chr1 (12 HSPs)
chr1 (10-245)||(20437027-20437261)
chr1 (135-253)||(41111977-41112094)
chr1 (184-303)||(32651563-32651682)
chr1 (184-245)||(18712790-18712851)
chr1 (193-245)||(19663520-19663572)
chr1 (192-245)||(10811786-10811839)
chr1 (192-245)||(20805320-20805373)
chr1 (193-245)||(11158093-11158145)
chr1 (194-245)||(20851136-20851187)
chr1 (194-245)||(20857763-20857814)
chr1 (194-245)||(21706276-21706327)
chr1 (194-245)||(21710818-21710869)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-253)||(11150-11401)
[»] scaffold0553 (1 HSPs)
scaffold0553 (10-245)||(10199-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (10-245)||(1529-1763)
[»] scaffold0058 (1 HSPs)
scaffold0058 (9-253)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (9-253)||(17985-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (166-301)||(904-1039)
scaffold0456 (166-301)||(8049-8184)
scaffold0456 (9-103)||(806-899)
scaffold0456 (9-103)||(7951-8044)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-245)||(3296-3540)
[»] scaffold0154 (1 HSPs)
scaffold0154 (109-253)||(30772-30917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-245)||(3625-3868)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-89)||(3470-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (135-253)||(1728-1845)
scaffold0796 (135-253)||(5751-5868)
[»] scaffold0004 (1 HSPs)
scaffold0004 (184-295)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (137-245)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (184-245)||(16811-16872)
[»] scaffold0461 (1 HSPs)
scaffold0461 (184-245)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (184-245)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (184-245)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (193-245)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (193-245)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (193-245)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (195-245)||(22596-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (193-245)||(34279-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (192-245)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (185-245)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (193-245)||(15000-15052)
[»] scaffold0096 (1 HSPs)
scaffold0096 (192-245)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (197-245)||(1453-1501)
[»] scaffold1318 (1 HSPs)
scaffold1318 (194-245)||(1916-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (194-245)||(9336-9387)
[»] scaffold0127 (1 HSPs)
scaffold0127 (194-245)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (194-245)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (194-245)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (160-253)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (184-245)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (192-245)||(2631-2684)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 22750949 - 22751249
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22750949 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 22751048  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22751049 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 22751148  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctctgactatacttgttcatct 300  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  22751149 agaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcttct 22751248  T
Q  301 c 301  Q
    |    
T  22751249 c 22751249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 38144773 - 38144532
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  38144773 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38144674 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  210 agattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 28370291 - 28370058
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  28370291 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28370192 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacc 28370058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 19512204 - 19512438
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  19512204 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  19512303 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacc 19512438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 23528478 - 23528695
Alignment:
Q  39 ttcaatcaatttatg-atcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttca 137  Q
    ||||||||||| ||| || |||||| |||||  ||||||| |||| |||| ||||||| ||| ||||  || |||||  ||| |||| || |  || |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatca 23528575  T
Q  138 gaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 237  Q
    |||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 23528674  T
Q  238 cccttaccatagttttagaag 258  Q
    |||||||| ||||||||||||    
T  23528675 cccttaccttagttttagaag 23528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 18408008 - 18407947
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacc 18407947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 23111264 - 23111203
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacc 23111203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 22438803 - 22438751
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttacc 22438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 19236900 - 19236951
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 19236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 22461158 - 22461207
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22461207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 22467782 - 22467831
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22467831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 18873168 - 18873468
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873168 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 18873267  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18873268 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 18873367  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctctgactatacttgttcatct 300  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||| |||    
T  18873368 agaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacggccggattctctgactatacttgttcttct 18873467  T
Q  301 c 301  Q
    |    
T  18873468 c 18873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 15167983 - 15168227
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15167983 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 15168082  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15168083 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 15168182  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  15168183 agaaattatagattatgattatcgagagatagtctcacccttacc 15168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 10896038 - 10895795
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10896038 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 10895939  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaatttt 199  Q
    |||| ||||||||| ||||| ||||| |||||| ||||||||||||| |||||||||||| |||||||| |||| ||||||| |||||||||||||||||    
T  10895938 caagagaattaacatgatcaataccc-attcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaatttt 10895840  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttac 244  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  10895839 caaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  14422802 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  14422901 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  209 tagattatgattattgagagatagtctcacccttaccatagttt 252  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 12710091 - 12709839
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| |||||| ||||||||||  |||||||||||||||||    
T  12710091 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatt 12709993  T
Q  100 acaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattt 198  Q
    ||||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  12709992 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 12709894  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12709893 tcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 13123162 - 13122910
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| |||||| ||||||||||  |||||||||||||||||    
T  13123162 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatt 13123064  T
Q  100 acaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattt 198  Q
    ||||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  13123063 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 13122965  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13122964 tcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 16009395 - 16009628
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  16009395 ttcatcaattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||| |||||| |||||||| ||||||||| | |||||||||||||||||||||||||||    
T  16009494 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacc 16009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 13743526 - 13743768
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 108  Q
    ||||||||||| |||||| ||  ||||| |||||| ||||||||||||||||||  |||| ||||||||| |||| ||||||||  ||| ||||||  ||    
T  13743526 attcatcaatttatccaaccaagcataa-tttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  109 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 208  Q
    |||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  209 tagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    || |||||||||||||||||||||||||||||||||| |||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 39 - 253
Target Start/End: Complemental strand, 12590851 - 12590639
Alignment:
Q  39 ttcaatcaatttatg-atcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttca 137  Q
    ||||||||||| ||| || |||||| |||||  ||||||| ||||||||| ||||||| ||| ||||  || |||||  ||| |||| || |  || |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatca 12590754  T
Q  138 gaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 237  Q
    |||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12590655  T
Q  238 cccttaccatagtttt 253  Q
    |||||||| |||||||    
T  12590654 cccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 13007374 - 13007491
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 13007472  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  13007473 tcacccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 16677180 - 16677347
Alignment:
Q  80 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 178  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  16677180 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 16677279  T
Q  179 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16677280 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 17651416 - 17651583
Alignment:
Q  80 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 178  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  17651416 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 17651515  T
Q  179 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17651516 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 11382926 - 11382874
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11382874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 11389403 - 11389351
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11389351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20311107 - 20311055
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttacc 20311055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 21231015 - 21230963
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 21230963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 13679485 - 13679545
Alignment:
Q  185 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||| |||||||||| |||||||| || ||||| ||||| |||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacc 13679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 2971254 - 2971305
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttacc 2971305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 11311059 - 11311110
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||| ||||||| || | ||| ||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacc 11311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 20906516 - 20906465
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 46625961 - 46626012
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    ||||||||| ||||||||| ||||| || |||||||| ||||||||||||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcaccctta 46626012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 12098 - 11846
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  12098 atacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatatta 11999  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  11998 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttc 11899  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11898 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 111504 - 111737
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  111504 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  111603 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttacc 111737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 14763005 - 14762761
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763005 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 14762906  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14762905 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 14762806  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  14762805 agaaattatagattatgattatcgagagatagtctcacccttacc 14762761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38311047 - 38310803
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38311047 atacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 38310948  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  38310947 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattc 38310848  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  38310847 agaaattatagattatgattatcgagagatagtctcacccttacc 38310803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 20248021 - 20247792
Alignment:
Q  16 aattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacac 115  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  116 gatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 215  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  216 tgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacc 20247792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 9534146 - 9534379
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||  || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  9534146 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9534245 taacatgatcaataccca-ttccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacc 9534379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 24192771 - 24193008
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgat-cacagcagcaacaaagattaagttttcattctgaacattatattacaaggga 107  Q
    ||||||||||| ||||||||| |||||  ||||||||| |||||||| ||||||| || || |||||||||||||||||||||||| | |||||||  ||    
T  24192771 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  108 attaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaat 206  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  207 tatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacc 24193008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 23370743 - 23370509
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  23370743 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  23370644 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||| ||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttacc 23370509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 55499337 - 55499105
Alignment:
Q  13 atcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaa 112  Q
    ||||||||||||||||| | |||  ||||||||||||||||||||||||| |   | |||||||| |||||||| |||||| | |||||||   ||||||    
T  55499337 atcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  113 cacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatag 211  Q
    || |||||||||||| ||||| ||||||||||||| |||||||||||||||||||  |   |||   |||||| ||||||||||||| | ||||||| |     
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcagttaggtcaattttcccgaaattacat 55499140  T
Q  212 attat-gattattgagagatagtctcacccttacc 245  Q
    |||||  |||| |||||||||||||||||||||||    
T  55499139 attatctattaatgagagatagtctcacccttacc 55499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 24933941 - 24933832
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| |||||||||   |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 24933843  T
Q  235 tcacccttacc 245  Q
    |||||||||||    
T  24933842 tcacccttacc 24933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 41455178 - 41455093
Alignment:
Q  167 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41455178 tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 16801606 - 16801463
Alignment:
Q  109 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 207  Q
    |||||| ||||||||| | |||| | ||| ||||||||| || |||||||| ||||||| || ||| ||| ||||||||| |||||||||||||||||||    
T  16801606 ttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaatt 16801508  T
Q  208 atagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||| || ||||||||||||||||||||||||||||||| |||||||    
T  16801507 atatat-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 18929239 - 18929297
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacc 18929297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 17240577 - 17240516
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacc 17240516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 13302295 - 13302244
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13302244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 13323842 - 13323791
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13323791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 12033499 - 12033448
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 12033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 13312951 - 13312900
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttacc 13312900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 17131732 - 17131783
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 17131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 51301589 - 51301640
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttacc 51301640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 10389557 - 10389447
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  235 tcacccttacc 245  Q
     ||||||||||    
T  10389457 ccacccttacc 10389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 10414646 - 10414536
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  235 tcacccttacc 245  Q
     ||||||||||    
T  10414546 ccacccttacc 10414536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 10421316 - 10421206
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  235 tcacccttacc 245  Q
     ||||||||||    
T  10421216 ccacccttacc 10421206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 16801027 - 16801080
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 16801080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 987 - 1237
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  987 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatatta 1085  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  1086 caagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 1184  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1185 aggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 49988 - 50238
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  49988 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatatta 50086  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  50087 caagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 50185  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50186 aggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 15 - 245
Target Start/End: Original strand, 23057760 - 23057990
Alignment:
Q  15 caattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaaca 114  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  115 cgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatt 214  Q
     |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  215 atgattattgagagatagtctcacccttacc 245  Q
    |||||||| ||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacc 23057990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 29614394 - 29614142
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  | ||    
T  29614394 atacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-caata 29614296  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattta-ttttccaaaactaagcaattaggtcaatttt 199  Q
    |||| ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  29614295 caagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaatttt 29614196  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29614195 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 23839016 - 23839250
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||  ||||    
T  23839016 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaa-actaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttacc 23839250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 10986418 - 10986184
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||  ||||    
T  10986418 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||    
T  10986319 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttacc 10986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 18800255 - 18800497
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| | |||  ||||||||||||| |||||||| || ||| | |||||||| ||||||| ||||||| | |||||||  ||||    
T  18800255 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-tattttccaaaactaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18800354 taacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  209 tagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 4477678 - 4477909
Alignment:
Q  13 atcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaa 112  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||||     
T  4477678 atcaaatcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  113 cacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaattatag 211  Q
    || ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  4477777 catgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  212 attatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacc 4477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 116 - 253
Target Start/End: Complemental strand, 930227 - 930091
Alignment:
Q  116 gatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 215  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  930227 gatcattaccca-ttcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatta 930129  T
Q  216 tgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||| |||||||    
T  930128 tgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21565458 - 21565215
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| | |||  ||||||||||||||||||||||||| ||  | |||||||| |||||||| |||| | | ||||    
T  21565458 atacagaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatta 21565360  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||   |||||||| ||||||||||| |||||| | ||||||||||| |||||||||||||||||||  |   |||   |||||||||||||||||||||    
T  21565359 caacataattaacatgatcattaccc-attccccttagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttc 21565261  T
Q  201 agaaattatagattat-gattattgagagatagtctcacccttacc 245  Q
     ||||||| | |||||  |||| |||||||||||||||||||||||    
T  21565260 cgaaattaaatattatctattaatgagagatagtctcacccttacc 21565215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 12168305 - 12168422
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 12168403  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  12168404 tcacccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 19287214 - 19287331
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19287312  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  19287313 tcacccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 19785982 - 19785865
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  ||| |||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtc 19785884  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  19785883 tcacccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 19878398 - 19878515
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19878496  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  19878497 tcacccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 19884174 - 19884291
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19884272  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||| ||| |||||||    
T  19884273 tcaccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 34640069 - 34639990
Alignment:
Q  166 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34639990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 34646743 - 34646664
Alignment:
Q  166 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34646664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 25469816 - 25469708
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||| ||||| |||||||||   |||  |||||||||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  235 tcacccttacc 245  Q
    |||||||||||    
T  25469718 tcacccttacc 25469708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 24512899 - 24512851
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcaccct 241  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccct 24512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 9187498 - 9187547
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacc 9187547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25348486 - 25348539
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 25348539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25598643 - 25598696
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacc 25598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25397172 - 25397225
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacc 25397225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 2286823 - 2286770
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 2286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 19471391 - 19471338
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacc 19471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 31252413 - 31252474
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttacc 31252474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 111717 - 111942
Alignment:
Q  29 attcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaa 128  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||     
T  111717 attcatcaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccat 111816  T
Q  129 ttcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgaga 227  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111817 ttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgaga 111916  T
Q  228 gatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||| |||||||    
T  111917 gatagtctcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 8046079 - 8045828
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  8046079 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatatta 8045980  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||| |||||||||  ||| ||||||| |||||||||||||  || | ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  8045979 caagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 8045881  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8045880 agaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 11847915 - 11848173
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11847915 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 11848014  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaa------tttattttccaaaactaagcaattaggtca 194  Q
     ||  | ||||||| |||||||||||| | | |||||||||| |||| ||||||||||||||||      || ||||| |||||||| || | |||||||    
T  11848015 taaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtca 11848114  T
Q  195 attttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11848115 attttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 53483646 - 53483756
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 233  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  234 ctcacccttacc 245  Q
    ||||||||||||    
T  53483745 ctcacccttacc 53483756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 15408139 - 15408191
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 15408191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 8834895 - 8834948
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 8834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 13888641 - 13888694
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacc 13888694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 14486661 - 14486712
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacc 14486712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 15245215 - 15245268
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacc 15245268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 15308120 - 15308171
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcaccctta 15308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 27906266 - 27906315
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    ||||||||||||||||| |||||||| ||||| ||||| || ||||||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccaccctta 27906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 998 - 746
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||| ||||||||||| || |||||||||||||||    
T  998 atacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatatta 900  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaatttt 199  Q
    |||| | |||| || |||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  899 caagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt 800  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  799 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 2143 - 1893
Alignment:
Q  2 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 101  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  102 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 200  Q
    ||| |||||||||  |||||||||||  | || ||| ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  2043 aagagaattaacataatcattaccca--ttccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 8820 - 8570
Alignment:
Q  2 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 101  Q
    ||||||||||||||||||||| |||||| | || |||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  102 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 200  Q
    ||| |||||||||  |||||||||||  | || ||| ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  8720 aagagaattaacataatcattaccca--ttccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 14635 - 14399
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 108  Q
    ||||||||||| ||||||||| |||||  ||||||||| ||||||||||||||| || || ||||||||||||||||| |||||| | |||||||  |||    
T  14635 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  109 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaatt 207  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  208 atagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacc 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 44477441 - 44477674
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44477441 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44477540 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttacc 44477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 44492599 - 44492832
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44492599 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44492698 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttacc 44492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8727980 - 8727736
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| ||||    
T  8727980 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacatta 8727881  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaatttt 199  Q
    |||  ||||||||| ||||| ||||| || ||| ||||||||||| | ||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  8727880 caacagaattaacatgatcaataccc-atacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttt 8727782  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||    
T  8727781 cagaaattatagattatgattattgagggataatctcacccttacc 8727736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 23866422 - 23866674
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||| |||| |||||| ||||||||||  |||||||||||||||||    
T  23866422 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatatt 23866520  T
Q  100 acaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattt 198  Q
    ||||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  23866521 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 23866619  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  23866620 tcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| | || ||  | ||||||| |||||||||||||||||| |||||||  ||||    
T  27941091 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaa 157  Q
    ||||| ||||| ||||| |||||| ||||||||||||| |||||||||    
T  27940992 taacatgatcaataccc-attcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 17054533 - 17054642
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 17054631  T
Q  235 tcacccttacc 245  Q
    |||||||||||    
T  17054632 tcacccttacc 17054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 18614271 - 18614382
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctctgactatac 290  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||  |||||||| |||||||||| || | |||||||||||| |||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-atttagaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  291 ttgttcatctcac 303  Q
    |||||| ||||||    
T  18614370 ttgttcttctcac 18614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 23482117 - 23482056
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacc 23482056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 39364919 - 39364972
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 39364972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 29643440 - 29643389
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 29643389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 14056619 - 14056567
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttacc 14056567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 25111976 - 25112028
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttacc 25112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 24320725 - 24320674
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 24320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 21931696 - 21931749
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 21931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 19661690 - 19661457
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  19661690 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  19661591 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| |||||| |||||||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacc 19661457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 6483536 - 6483769
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6483536 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6483635 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacc 6483769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 6487003 - 6487236
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6487003 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 209  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6487102 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  210 agattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacc 6487236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 253
Target Start/End: Original strand, 26583715 - 26583886
Alignment:
Q  80 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaac 179  Q
    |||||||||||||| |  ||||||   | |||||| |||||||||||  ||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  26583715 ttcattctgaacatcactttacaacatatttaacatgatcattaccct-ttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaac 26583813  T
Q  180 taagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26583814 tatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 26583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23878817 - 23879059
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| |  ||  |||||||||||||||||||||| || ||  | |||||||| ||||||||||||||| | ||||    
T  23878817 atacaaaacttcatcaattcatccaatcaattctat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacatta 23878915  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||   |||||||| ||||||||||| |||||| ||||||||||||   ||||||||||||||||||| |   |||   ||||||||||||||||||||     
T  23878916 caacataattaacatgatcattaccccattcccctcagaatcatca-acaaccctaaccctcaatttaatcctcaaggttaagcaattaggtcaattttt 23879014  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttacc 245  Q
     ||||||||| || || |||| |||||||||||||||||||||||    
T  23879015 cgaaattatatataattattaatgagagatagtctcacccttacc 23879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23089301 - 23089058
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| | |||  ||||||||||||||||||||||||| ||  | |||||||| |||||||| |||| | | ||||    
T  23089301 atacagaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatta 23089203  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||   |||||||| ||||||||||| |||||| | ||||||||||| |||||||||||||||||||  |   |||   |||||||||||||||||||||    
T  23089202 caacataattaacatgatcattaccc-attccccttagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttc 23089104  T
Q  201 agaaattatagattat-gattattgagagatagtctcacccttacc 245  Q
     ||||||| | |||||  |||| |||||||||||||||||||||||    
T  23089103 cgaaattaaatattatctattaatgagagatagtctcacccttacc 23089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23101709 - 23101466
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || ||||| |||||||||||||| | |||  |||||||||||||||||||||| || ||  | |||||||| |||||||| |||| | | ||||    
T  23101709 atacagaacttcatgaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacatta 23101611  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||   |||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||  |   |||   ||| |||||||||||||||||    
T  23101610 caacataattaacatgatcattaccc-attcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaattaggtcaattttc 23101512  T
Q  201 agaaattatagattat-gattattgagagatagtctcacccttacc 245  Q
     ||||||| | |||||  |||| |||||||||||||||||||||||    
T  23101511 cgaaattacatattatctattaatgagagatagtctcacccttacc 23101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 5706137 - 5706027
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 233  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  234 ctcacccttacc 245  Q
    ||||||||||||    
T  5706038 ctcacccttacc 5706027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 23265133 - 23265194
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacc 23265194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 23280201 - 23280262
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacc 23280262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 21908353 - 21908411
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacc 21908411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 24661576 - 24661629
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacc 24661629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 10577 - 10628
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 10628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 25180984 - 25180933
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 25180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 26885133 - 26885233
Alignment:
Q  145 cattaaaccctaaccctcaatttattttccaa-aactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    ||||| |||||||  |||||||| || ||||| |||||  | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||    
T  26885133 cattataccctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccaccctta 26885231  T
Q  244 cc 245  Q
    ||    
T  26885232 cc 26885233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 20437261 - 20437027
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||   |||    
T  20437261 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  20437162 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttacc 20437027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 41111977 - 41112094
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  41112076 tcacccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 32651563 - 32651682
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 282  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  283 gactatacttgttcatctcac 303  Q
    ||||  |||||||| ||||||    
T  32651662 gactccacttgttcttctcac 32651682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 18712790 - 18712851
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacc 18712851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 19663572 - 19663520
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacc 19663520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 10811839 - 10811786
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacc 10811786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 20805320 - 20805373
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 20805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 11158093 - 11158145
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacc 11158145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 20851187 - 20851136
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 20857814 - 20857763
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20857763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 21706276 - 21706327
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21706327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 21710818 - 21710869
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21710869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 11150 - 11401
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| | |||  ||||||||||||| ||||||||||| ||  |  ||||||| ||||||| ||||||| | ||||    
T  11150 atacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacatta 11248  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-tattttccaaaactaagcaattaggtcaatttt 199  Q
    |||  ||||||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11249 caacagaattaacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt 11347  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11348 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 10433 - 10199
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  10433 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  10334 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttacc 10199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 1763 - 1529
Alignment:
Q  10 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  1763 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  110 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  1664 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  209 tagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttacc 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 109 - 350
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 108  Q
    ||||||||||| |||||| || |||||| |||||| ||||||||||||||| ||  |||| ||||||||| |||| ||||||||  ||| ||||||  ||    
T  109 attcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  109 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 208  Q
    |||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  208 ttaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  209 tagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 17985 - 18229
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagg-ga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||   ||    
T  17985 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  108 attaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaat 206  Q
    ||||||| || ||||||| | ||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  207 tatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 904 - 1039
Alignment:
Q  166 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 265  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  266 caacgaccagattctctgactatacttgttcatctc 301  Q
    |||||||| |||||||||||||||||||||| ||||    
T  1004 caacgaccggattctctgactatacttgttcttctc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 8049 - 8184
Alignment:
Q  166 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 265  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  266 caacgaccagattctctgactatacttgttcatctc 301  Q
    |||||||| |||||||||||| ||||||||| ||||    
T  8149 caacgaccggattctctgactctacttgttcttctc 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 806 - 899
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaa 103  Q
    ||||||||||| ||||||||  |||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||    
T  806 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 7951 - 8044
Alignment:
Q  9 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaa 103  Q
    ||||||||||| ||||||||  |||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||    
T  7951 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 3540 - 3296
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| | |||  ||||||||||||| ||||||||||| ||  | |||||||| ||||||||||||||| | ||||    
T  3540 atacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacatta 3442  T
Q  101 caagggaattaacacga-tcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 199  Q
    |||   |||||||| || ||||||||| |||||| ||||||||||||| |||||||||||||||||||  |  ||||   ||||||||||||||||||||    
T  3441 caacaaaattaacatgattcattaccc-attcccctcagaatcatcatcaaaccctaaccctcaattttatccccaaggttaagcaattaggtcaatttt 3343  T
Q  200 cagaaattatagattat-gattattgagagatagtctcacccttacc 245  Q
    | ||||||| | |||||  |||| |||||||||||||||||||||||    
T  3342 ccgaaattacatattatctattaatgagagatagtctcacccttacc 3296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 253
Target Start/End: Original strand, 30772 - 30917
Alignment:
Q  109 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 207  Q
    |||||| |||| |||| | |||||| ||| ||||||||| ||||||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||    
T  30772 ttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaatt 30871  T
Q  208 atagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  30872 atagattatgattattgagagatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 3868 - 3625
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||| | |||  |||||||||||||||||||||| || ||  | |||||||| |||||||| |||||| | ||||    
T  3868 atacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacatta 3770  T
Q  101 caagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttc 200  Q
    |||   |||||||| ||||||||||| || ||| ||||||||||||| |||||||||||||||||||  |   |||   |||||||||||||||||||||    
T  3769 caacataattaacatgatcattaccc-atccccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttc 3671  T
Q  201 agaaattatagattat-gattattgagagatagtctcacccttacc 245  Q
     ||||||| | |||||  |||| |||||||||||||||||||||||    
T  3670 cgaaattacatattatctattaatgagagatagtctcacccttacc 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3470 - 3558
Alignment:
Q  1 atacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctga 89  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3470 atacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 1845 - 1728
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 1747  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  1746 tcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 5868 - 5751
Alignment:
Q  135 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 5770  T
Q  235 tcacccttaccatagtttt 253  Q
    ||||||||||| |||||||    
T  5769 tcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 116887 - 116998
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 282  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 116985  T
Q  283 gactatacttgtt 295  Q
    ||||  |||||||    
T  116986 gactccacttgtt 116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 45386 - 45278
Alignment:
Q  137 agaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 235  Q
    ||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  236 cacccttacc 245  Q
    ||||||||||    
T  45287 cacccttacc 45278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 16811 - 16872
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacc 16872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 72 - 11
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacc 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 13623 - 13684
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacc 13684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 101992 - 101931
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacc 101931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 17643 - 17695
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttacc 17695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 40587 - 40535
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 40535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 135473 - 135525
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 135525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 22646 - 22596
Alignment:
Q  195 attttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacc 22596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 34331 - 34279
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacc 34279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 12296 - 12349
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 1378 - 1438
Alignment:
Q  185 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||| |||||||||| |||||||| || ||||| ||||| |||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacc 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 15052 - 15000
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacc 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 39563 - 39510
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacc 39510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 1453 - 1501
Alignment:
Q  197 tttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttacc 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 1967 - 1916
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 9336 - 9387
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 9387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 10239 - 10290
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttacc 10290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 135438 - 135489
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttacc 135489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 493082 - 493032
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttacc 493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 680 - 774
Alignment:
Q  160 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 253  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||| |||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 5922 - 5861
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttacc 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 2684 - 2631
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 245  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 2631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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