View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19319_high_6 (Length: 379)
Name: NF19319_high_6
Description: NF19319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19319_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 366
Target Start/End: Original strand, 29460727 - 29461075
Alignment:
| Q |
19 |
aagccatggctggattatgaagggaaaagtaaggattaattaagttctacataattcccaattctggtgcatacatttatttaattgtatgcattaacat |
118 |
Q |
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| T |
29460727 |
aagccatggctggattatgaagggaaaagtaaggattaattaagt-ctacataattcccaattctggtgcatacatttatttaattgtatgcattaacat |
29460825 |
T |
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| Q |
119 |
acgtccatgaagagttttatttcccttaaattagatcccaattttgaattctagtacactgcaccataattgagatccagtaagattgttgtatcaaata |
218 |
Q |
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| T |
29460826 |
acgtccatgtagagttttatttcccttaaattagatcccaattttgaattctagtacactgcaccataattgagatccagtaagattgttgtatcaaata |
29460925 |
T |
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| Q |
219 |
accaatactttctcattaannnnnnnaatcatttctaacaaaattagagaat---aagaactgaacttgattcataaaacttattattaagttctcatac |
315 |
Q |
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| T |
29460926 |
accaatactttctcattaatttttttaatcatttctaacaaaattagagaataagaagaactgaacttgattcataaaacttattattaagttctcatac |
29461025 |
T |
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| Q |
316 |
aaagtgatatatacataacaatcatattacaaaccagaattctctgaagta |
366 |
Q |
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| T |
29461026 |
aaagtgatatatacataacaatcatattacaaaccagaattc-ctgaagta |
29461075 |
T |
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