View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19319_low_17 (Length: 237)
Name: NF19319_low_17
Description: NF19319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19319_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 51051093 - 51051302
Alignment:
| Q |
13 |
cacagatcaaatgtgtgaaaaagtaggggacgggtgaaaagatagagaatagaaaataaatacaaatattgaagttcaaaagaacacttatgcttactta |
112 |
Q |
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| T |
51051093 |
cacagatcaaatgtgtgaaaaagtaggggacgggtgaaaagatacagaatagaaaataaatacaaatattgaagttcaaaagaacacttatgcttactta |
51051192 |
T |
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| Q |
113 |
aataaatgtcctagcagcataaaatttgg--agtttgcaaatgaaaacataaacattctcaatcgtccaccacaaagtagatacatcaaattactataag |
210 |
Q |
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| T |
51051193 |
aataaatgtcctagcagcataaaatttggaaagtttgcaaatgaaaacataaacattctcaatcgtccaccacaaagtagatacatcaaattactataag |
51051292 |
T |
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| Q |
211 |
atgaatatag |
220 |
Q |
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|||||||||| |
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| T |
51051293 |
atgaatatag |
51051302 |
T |
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