View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19319_low_7 (Length: 415)
Name: NF19319_low_7
Description: NF19319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19319_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 29 - 398
Target Start/End: Complemental strand, 49086045 - 49085672
Alignment:
| Q |
29 |
ggcacagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcctcatcgttattagacataagcat |
128 |
Q |
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| T |
49086045 |
ggcacagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcttcatcgttattagacataagcat |
49085946 |
T |
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| Q |
129 |
actagttaaaccacagccctaacaagtaagatttaca----cgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgt |
224 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085945 |
gctagttaaaccacagccctaacaagtaagatttaaataaacgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgt |
49085846 |
T |
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| Q |
225 |
aggagacagtcaatgagtcaatataattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttgatttcactagacctacactacag |
324 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085845 |
aggagacagtcaatgagtcaatgtaattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttgatttcactagacctacactacag |
49085746 |
T |
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| Q |
325 |
ttaaccattgttgagtcaaattagtgttcaagtcagactgtaaatcaataatgaaggtaacttgaaacaaaaca |
398 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085745 |
ttaaccattgttgagtcaaattagtgttcaagtcagactgtaaatcaataatgaaggtaacttgaaacaaaaca |
49085672 |
T |
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