View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19320_high_18 (Length: 253)
Name: NF19320_high_18
Description: NF19320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19320_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 13797306 - 13797535
Alignment:
| Q |
8 |
agagaagaagttaggattatgagaaaaaacagcttacaacagattgcatatattagcactttacataccttgagtgaaatggaattcattagcatcaacn |
107 |
Q |
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| T |
13797306 |
agagaagaagttaggattatgagaaaaaacagcttacaacagattgcatatattagcactttacataccttgagtgaaatggaattcattagcatcaact |
13797405 |
T |
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| Q |
108 |
nnnnnnnataatcaaactaatctattcaattccattccatcatacaatatcaatccaaacatagccttaaaactacagaagactagtcttcgagctgatt |
207 |
Q |
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| T |
13797406 |
tttttttataatcaaactaatctattcaattccattccatcatacactatcaatccaaacatagccttaaaactacagaagactagtcttcgagctgatt |
13797505 |
T |
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| Q |
208 |
tacacatatatattccataccctagaagtt |
237 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
13797506 |
tacacatatatattccataccctagaagtt |
13797535 |
T |
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