View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19320_low_12 (Length: 403)
Name: NF19320_low_12
Description: NF19320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19320_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 66 - 395
Target Start/End: Complemental strand, 50767470 - 50767142
Alignment:
| Q |
66 |
tgttactttgattaactggatcagtggcattaaaatcaaggtgattaattctagatgatatctacaggttaaattctagtatatgcagattgaaccacac |
165 |
Q |
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| T |
50767470 |
tgttactttgattaactggatcagtggcattaaaatcaaggtgattaattctagatgatatctacaggttaaattctagtatatgcagattgaaccacac |
50767371 |
T |
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| Q |
166 |
atttattgaaccaagatgttgcatgaatgaatccgaatggaaatcaaatgattcaagtggcgtggctttgaagaagttcaagaaagacagcgtttacatt |
265 |
Q |
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| T |
50767370 |
atttattgaaccaagatgttgcatgaatgaatccgaatggaaatcaaatgattcaagtggcgtggctttgaagaagttcaagaaagacagcgtttacatt |
50767271 |
T |
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| Q |
266 |
gataaaactggcaacttaaggaacttcaatcacaaaaaactttccaggaaaaaatgtaaatctattctatactctcctacctgaaacacaacacaagttt |
365 |
Q |
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| T |
50767270 |
gataaaactggcaacttaaggaacttcaatcacaaaaaactttccaggaaaaaatgt-aatctattctatactctcctacctgaaacacaacacaagttt |
50767172 |
T |
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| Q |
366 |
tgtatgtgtaaacagtgttgttattttctt |
395 |
Q |
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| T |
50767171 |
tgtatgtgtaaacagtgttgttattttctt |
50767142 |
T |
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