View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19320_low_24 (Length: 236)

Name: NF19320_low_24
Description: NF19320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19320_low_24
NF19320_low_24
[»] chr5 (19 HSPs)
chr5 (1-222)||(7464333-7464554)
chr5 (1-83)||(39850653-39850734)
chr5 (1-86)||(43369889-43369973)
chr5 (1-89)||(24007253-24007340)
chr5 (2-86)||(19514310-19514393)
chr5 (17-90)||(38938788-38938862)
chr5 (17-87)||(28766049-28766118)
chr5 (1-87)||(35271879-35271964)
chr5 (1-70)||(16611200-16611269)
chr5 (17-86)||(38939049-38939119)
chr5 (41-86)||(17261291-17261335)
chr5 (1-86)||(32904693-32904777)
chr5 (1-66)||(17065157-17065222)
chr5 (1-78)||(33628895-33628973)
chr5 (2-70)||(23270250-23270319)
chr5 (17-83)||(28221923-28221990)
chr5 (17-83)||(38938926-38938993)
chr5 (17-70)||(3160981-3161036)
chr5 (1-89)||(36954258-36954345)
[»] chr4 (31 HSPs)
chr4 (1-88)||(11333060-11333146)
chr4 (4-89)||(12214804-12214888)
chr4 (1-89)||(26005807-26005893)
chr4 (1-83)||(29096795-29096876)
chr4 (1-87)||(44469169-44469254)
chr4 (1-70)||(44182491-44182560)
chr4 (26-90)||(37144040-37144103)
chr4 (17-88)||(5524834-5524906)
chr4 (26-93)||(11974872-11974940)
chr4 (1-89)||(43317363-43317450)
chr4 (17-89)||(9162938-9163011)
chr4 (4-87)||(10727150-10727232)
chr4 (4-87)||(10940919-10941001)
chr4 (1-68)||(23432029-23432096)
chr4 (17-83)||(24425755-24425822)
chr4 (1-88)||(25987521-25987606)
chr4 (1-68)||(50179103-50179170)
chr4 (1-87)||(2291294-2291380)
chr4 (1-87)||(27866398-27866483)
chr4 (1-70)||(46620856-46620925)
chr4 (17-70)||(49357990-49358043)
chr4 (3-83)||(5190179-5190258)
chr4 (35-87)||(21796045-21796096)
chr4 (3-87)||(32779138-32779220)
chr4 (1-87)||(27104112-27104199)
chr4 (1-83)||(43491228-43491310)
chr4 (17-88)||(3729297-3729369)
chr4 (17-71)||(44814345-44814401)
chr4 (17-89)||(54198486-54198560)
chr4 (1-57)||(6385187-6385243)
chr4 (1-89)||(20702108-20702195)
[»] chr7 (19 HSPs)
chr7 (1-86)||(15470529-15470615)
chr7 (20-89)||(11321469-11321539)
chr7 (1-89)||(21094247-21094334)
chr7 (1-88)||(20045115-20045201)
chr7 (1-87)||(2750186-2750271)
chr7 (1-87)||(2275933-2276020)
chr7 (1-88)||(20034705-20034790)
chr7 (6-86)||(45022635-45022716)
chr7 (1-91)||(46671377-46671466)
chr7 (17-85)||(4550114-4550182)
chr7 (1-45)||(6475009-6475053)
chr7 (1-60)||(7956939-7956998)
chr7 (17-85)||(9302015-9302084)
chr7 (17-85)||(9306453-9306522)
chr7 (26-88)||(20044989-20045050)
chr7 (1-85)||(2275163-2275247)
chr7 (51-92)||(25801743-25801783)
chr7 (20-89)||(9329599-9329669)
chr7 (17-70)||(47220824-47220879)
[»] chr1 (23 HSPs)
chr1 (1-85)||(43577189-43577272)
chr1 (2-86)||(48995718-48995801)
chr1 (20-86)||(46879852-46879917)
chr1 (1-89)||(8007191-8007278)
chr1 (1-84)||(37706263-37706345)
chr1 (1-70)||(16143689-16143758)
chr1 (1-90)||(50946430-50946518)
chr1 (6-87)||(4393-4475)
chr1 (2-70)||(49162456-49162524)
chr1 (5-95)||(13602984-13603072)
chr1 (1-70)||(8095973-8096042)
chr1 (1-85)||(773508-773591)
chr1 (1-81)||(37231310-37231389)
chr1 (2-86)||(46022095-46022178)
chr1 (1-70)||(27307909-27307979)
chr1 (1-87)||(31844857-31844942)
chr1 (17-87)||(29699372-29699443)
chr1 (19-85)||(43575382-43575449)
chr1 (17-89)||(8528019-8528092)
chr1 (1-86)||(52043018-52043103)
chr1 (48-89)||(7297008-7297048)
chr1 (17-78)||(14494622-14494686)
chr1 (17-89)||(14245748-14245819)
[»] chr3 (35 HSPs)
chr3 (1-88)||(51834123-51834210)
chr3 (1-87)||(28370156-28370242)
chr3 (1-87)||(28377974-28378060)
chr3 (1-87)||(28385796-28385882)
chr3 (1-87)||(18722389-18722474)
chr3 (1-79)||(13875240-13875317)
chr3 (1-89)||(12673099-12673186)
chr3 (17-89)||(7116162-7116235)
chr3 (1-89)||(21078407-21078493)
chr3 (6-86)||(28096097-28096178)
chr3 (1-83)||(14266080-14266161)
chr3 (1-87)||(22177121-22177206)
chr3 (1-89)||(35378828-35378915)
chr3 (17-89)||(3422826-3422899)
chr3 (17-89)||(42897051-42897124)
chr3 (1-88)||(51834015-51834101)
chr3 (1-87)||(22102173-22102258)
chr3 (17-87)||(37980534-37980603)
chr3 (42-91)||(51005922-51005970)
chr3 (17-78)||(51139777-51139841)
chr3 (20-83)||(3283537-3283601)
chr3 (1-84)||(39904174-39904255)
chr3 (1-70)||(4617388-4617458)
chr3 (1-87)||(7638620-7638706)
chr3 (17-71)||(18461561-18461615)
chr3 (1-87)||(21790723-21790808)
chr3 (4-86)||(37431259-37431340)
chr3 (1-87)||(46732135-46732220)
chr3 (1-89)||(2368788-2368876)
chr3 (17-87)||(7116291-7116362)
chr3 (1-70)||(23251385-23251453)
chr3 (17-73)||(22004218-22004274)
chr3 (17-73)||(22011735-22011791)
chr3 (1-70)||(22101462-22101533)
chr3 (17-70)||(22176407-22176462)
[»] chr6 (13 HSPs)
chr6 (1-83)||(11323087-11323168)
chr6 (1-85)||(1190322-1190405)
chr6 (1-70)||(16186815-16186884)
chr6 (17-89)||(2438947-2439020)
chr6 (6-83)||(2536875-2536953)
chr6 (1-93)||(6001608-6001699)
chr6 (1-89)||(14910088-14910175)
chr6 (17-86)||(17590054-17590124)
chr6 (1-87)||(2485626-2485713)
chr6 (1-78)||(2441184-2441262)
chr6 (1-83)||(14894609-14894690)
chr6 (1-87)||(20730098-20730183)
chr6 (20-88)||(24062042-24062109)
[»] chr8 (29 HSPs)
chr8 (1-85)||(26527922-26528005)
chr8 (1-70)||(36342699-36342768)
chr8 (2-86)||(38804846-38804929)
chr8 (1-87)||(28773390-28773479)
chr8 (1-77)||(21307363-21307438)
chr8 (1-87)||(4415295-4415379)
chr8 (17-89)||(32889010-32889083)
chr8 (1-83)||(28969879-28969960)
chr8 (1-87)||(33100003-33100087)
chr8 (1-86)||(33480616-33480701)
chr8 (26-92)||(43921933-43921998)
chr8 (1-70)||(2692276-2692345)
chr8 (2-83)||(10866559-10866639)
chr8 (3-88)||(15318259-15318342)
chr8 (3-88)||(15498628-15498711)
chr8 (1-70)||(41942717-41942786)
chr8 (26-87)||(45488721-45488781)
chr8 (17-70)||(26528047-26528101)
chr8 (1-92)||(1526362-1526452)
chr8 (1-83)||(1759790-1759869)
chr8 (1-60)||(23085213-23085272)
chr8 (17-81)||(32889137-32889202)
chr8 (1-87)||(8516054-8516139)
chr8 (1-87)||(8518133-8518218)
chr8 (1-83)||(36802121-36802202)
chr8 (17-87)||(37401970-37402039)
chr8 (26-86)||(11903741-11903802)
chr8 (1-89)||(20286746-20286834)
chr8 (1-89)||(21073375-21073463)
[»] scaffold0123 (1 HSPs)
scaffold0123 (17-86)||(17406-17476)
[»] scaffold0063 (1 HSPs)
scaffold0063 (9-89)||(51529-51608)
[»] chr2 (20 HSPs)
chr2 (2-86)||(629363-629446)
chr2 (1-51)||(21839419-21839469)
chr2 (1-86)||(24896276-24896363)
chr2 (1-68)||(8063242-8063309)
chr2 (1-87)||(3357588-3357673)
chr2 (17-83)||(19901631-19901696)
chr2 (17-71)||(2221907-2221963)
chr2 (25-87)||(25048172-25048235)
chr2 (17-78)||(44973124-44973188)
chr2 (6-87)||(35193622-35193703)
chr2 (1-81)||(39271864-39271947)
chr2 (36-78)||(21839357-21839400)
chr2 (17-78)||(21956495-21956557)
chr2 (17-87)||(40324130-40324199)
chr2 (17-87)||(309660-309731)
chr2 (17-83)||(7061426-7061493)
chr2 (1-90)||(40499580-40499668)
chr2 (17-79)||(44539713-44539776)
chr2 (41-85)||(15495951-15495994)
chr2 (4-68)||(40633667-40633731)
[»] scaffold0086 (1 HSPs)
scaffold0086 (26-72)||(48298-48344)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-95)||(131641-131729)
[»] scaffold0143 (1 HSPs)
scaffold0143 (1-86)||(5979-6064)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-83)||(47440-47521)
[»] scaffold0025 (1 HSPs)
scaffold0025 (6-81)||(11572-11648)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-86)||(254365-254450)
[»] scaffold0066 (1 HSPs)
scaffold0066 (17-70)||(56305-56358)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7464333 - 7464554
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaatcaagtatg 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7464333 tattgaaaattgaaggtatttttggaaagaaaagttcaacccaaaaatgttgaaagggatagttttcttttatatatagtatagatataaatcaagtatg 7464432  T
Q  101 tatttggattgatgtctatatgagtgtaattttatcaaccaaaattttacatgaaagacaaagttttagtaaatacgatcatacatagtcacatttatgc 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  7464433 tatttggattgatgtctatatgagtgtaattttgtcaaccaaaattttacatgaaagacaaagctttagtaaatacgatcatacaaagtcacatttatgc 7464532  T
Q  201 tttaggatgaagaaatattttt 222  Q
    ||||||||||||||||||||||    
T  7464533 tttaggatgaagaaatattttt 7464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39850734 - 39850653
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    |||||||||||||   ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39850734 tattgaaaattgagagtattttttgaaagaaaagtccaacccaaaaatgttgaaaggggtagttttc-tttatatatagtata 39850653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43369973 - 43369889
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||||||||| | ||||||||||||||||| |||| ||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  43369973 tattgaaaattgagggtatttttagaaagaaaaattcatcccaaaagtgttgaaagaagtagttttc-tttatatatagtatagat 43369889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24007340 - 24007253
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||| |||||||| | |||||||  |||||||| ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  24007340 tattcaaaattgagggtatttttgaaaagaaaaattcaacccaaaaatgctgaaaggggtagttttc-tttatatataatatagatata 24007253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 19514310 - 19514393
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||| | |||||||  |||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||    
T  19514310 attgaaaattgagggtatttttgaaaagaaaaattcaacccaaaaatgctgaaaggagtagttttc-tttatatatagaatagat 19514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 38938788 - 38938862
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatataa 90  Q
    ||||||| ||||||||||| |||||||||| |||  ||||||||||||||||| ||||||||||||||||||||||    
T  38938788 tatttttggaaagaaaagtccaacccaaaagtgtgctgaaaggggtagttttc-tttatatatagtatagatataa 38938862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 28766118 - 28766049
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||| |||||||||||| |||||||||  ||||||||| |||| ||||||||||||||    
T  28766118 tatttttggaaagaaaaattcaacccaaaagtgttgaaagaagtagttttc-tttacatatagtatagata 28766049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35271964 - 35271879
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||| | | ||||||| ||||||||| |||| ||||||| || |||||  |||||||||| |||||||||||||||||||    
T  35271964 tattgaaaattaatggtatttttggaaagaaaaattcagcccaaaagtgctgaaaaaggtagttttc-tttatatatagtatagata 35271879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16611200 - 16611269
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    |||||||||| || | |||||||||||| |||| |||||||||||| || ||||||||||| ||||||||    
T  16611200 tattgaaaatagagggtatttttagaaaaaaaaattcaacccaaaagtgctgaaaggggtatttttcttt 16611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 38939049 - 38939119
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||| ||||||||||| ||| |||||| |||  ||||||||||||||||| ||||||||||||||||||    
T  38939049 tatttttggaaagaaaagtccaatccaaaagtgtgttgaaaggggtagttttc-tttatatatagtatagat 38939119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 17261291 - 17261335
Alignment:
Q  41 ccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  17261291 ccaaaaatgctgaaaggggtagtttt-ttttatatatagtatagat 17261335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32904693 - 32904777
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||||||||| | |||||||| |||||||| | ||||  ||||||  ||||||||||| ||||| |||| |||||||||||||    
T  32904693 tattgaaaattgagggtatttttaaaaagaaaaatacaactaaaaaatactgaaaggggtaattttc-tttaaatatagtatagat 32904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17065157 - 17065222
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagtt-caacccaaaaatgttgaaaggggtagtttt 66  Q
    ||||||||||||| | ||||||| | ||||||| || ||||||||||||| ||||||||||||||||    
T  17065157 tattgaaaattgagggtattttt-gtaagaaaaattgcaacccaaaaatgctgaaaggggtagtttt 17065222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33628973 - 33628895
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatata 78  Q
    ||||||||||||| | ||||||| ||||||||| |||| ||||||| |  |||||| |||| |||||||| ||||||||    
T  33628973 tattgaaaattgagggtatttttggaaagaaaatttcagcccaaaagttctgaaagaggtaattttctttatatatata 33628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 23270319 - 23270250
Alignment:
Q  2 attgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    |||||||||||| | ||||||| ||||| ||||  ||| ||||||| || ||||||||||||||||||||    
T  23270319 attgaaaattgagggtatttttggaaaggaaaaagtcagcccaaaattgctgaaaggggtagttttcttt 23270250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 28221990 - 28221923
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||| ||||||||||| |||||||||| |||  |||||| | |||||||| |||||||||||||||    
T  28221990 tatttttggaaagaaaagtccaacccaaaagtgtgctgaaagagatagttttc-tttatatatagtata 28221923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38938926 - 38938993
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtata 83  Q
    |||||||  |||||||||| |||||||||| |||  ||||||||||||||||| |||||||||| ||||    
T  38938926 tatttttgaaaagaaaagtccaacccaaaagtgtgctgaaaggggtagttttc-tttatatataatata 38938993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 3160981 - 3161036
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttt 70  Q
    ||||||| ||| |||||||||||||||||| |||  || |||||||||||||||||    
T  3160981 tatttttggaatgaaaagttcaacccaaaagtgtgctggaaggggtagttttcttt 3161036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36954258 - 36954345
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| || |||||| | || ||||  ||| ||||||| |||||||| | || |||||| ||| |||||||||||||||||    
T  36954258 tattgaaaattgaggacatttttggcaacaaaaagtcagcccaaaagtgttgaaatgagttgttttc-tttgtatatagtatagatata 36954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11333146 - 11333060
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  11333146 tattgaaaattgaggatatttttgaaaagaaaagttcagcccaaaagtgctgaaaggggtagttttc-tttatatatagtatagatat 11333060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 12214804 - 12214888
Alignment:
Q  4 tgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||||||||| | ||||||| ||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  12214804 tgaaaattgagggtatttttggaaagaaaaattcagcccaaaagtgttgaaaggggtagttttc-tttatacatagtatagatata 12214888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26005893 - 26005807
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | ||||||||||||||||| | ||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  26005893 tattgaaaattgagggtatttttagaaagaaaa-tccaaccaaaaaatgttgaaaggggtaattttc-tttatatatagcatagatata 26005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29096876 - 29096795
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||||| | ||||||||||| ||||| ||||||||||||||  | ||||||||||||||| |||||||||||||||    
T  29096876 tattgaaaattgagggtatttttagaaggaaaaattcaacccaaaaattctaaaaggggtagttttc-tttatatatagtata 29096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44469169 - 44469254
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| | ||||||| ||||||||| |||| ||||||| ||||||||||| || ||||||| || ||||||||||||||    
T  44469169 tattgaaaattgagggtatttttggaaagaaaaattcagcccaaaagtgttgaaagggataattttcttcta-atatagtatagata 44469254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44182491 - 44182560
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | || |||| ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  44182491 tattgaaaattgatggtaattttggaaggaaaaattcaatccaaaaatgttgaaaggggtagttttcttt 44182560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 37144040 - 37144103
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataa 90  Q
    |||||||| | |||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  37144040 aaagaaaaatccaacccaaaagtgctgaaaggggtagttttc-tttatatatagtatagatataa 37144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 5524906 - 5524834
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||| ||||||||||| |||||||||| |||  ||||||||||||||||| |||||||||| |||||||||    
T  5524906 tatttttggaaagaaaagtacaacccaaaagtgtgctgaaaggggtagttttc-tttatatataatatagatat 5524834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 11974872 - 11974940
Alignment:
Q  26 aaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagtatagatataaatc 93  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  11974872 aaagaaaagttcaacccaaatgtatgctgaaaggggtagttttcttt-atatatagtatagatatcaatc 11974940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43317450 - 43317363
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | |||||||  |||||||| |||||||||||| || ||||| ||||  ||||| ||| |||||||||||||||||    
T  43317450 tattgaaaattgagggtatttttgaaaagaaaaattcaacccaaaagtgctgaaaagggtgattttc-tttctatatagtatagatata 43317363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9162938 - 9163011
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||||| ||||| |||| |||  |||| ||||||||||||||| ||||||||||||||||||    
T  9162938 tatttttggaaagaaaagtccaaccgaaaagtgtgctgaacggggtagttttcttt-atatatagtatagatata 9163011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 10727232 - 10727150
Alignment:
Q  4 tgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||||| | ||||||| ||||||||| |  ||| ||||| || |||||| |||||||||| |||||||||||||||||||    
T  10727232 tgaaaattgagggtatttttggaaagaaaaatctaactcaaaagtgctgaaagaggtagttttc-tttatatatagtatagata 10727150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 10941001 - 10940919
Alignment:
Q  4 tgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||||| | ||||||| ||||||||| |  ||| ||||| || |||||| |||||||||| |||||||||||||||||||    
T  10941001 tgaaaattgagggtatttttggaaagaaaaatctaactcaaaagtgctgaaagaggtagttttc-tttatatatagtatagata 10940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23432029 - 23432096
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttct 68  Q
    ||||||||||||| |  |||||| ||||||||| |||| ||||||| |||||||| ||||||||||||    
T  23432029 tattgaaaattgagggcattttttgaaagaaaaattcagcccaaaagtgttgaaatgggtagttttct 23432096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24425755 - 24425822
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtata 83  Q
    ||||||| ||||||||| | |||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  24425755 tatttttggaaagaaaaatccaacccaaaaatgttgaacgaggtggttttctttatatatatagtata 24425822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25987606 - 25987521
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    |||||||||||||  | ||||||  ||||||||  ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||    
T  25987606 tattgaaaattgagaacatttttgaaaagaaaaagtcaacccaaaagtgctgaaa-gggtagttttc-tttatatatagtatagatat 25987521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 50179170 - 50179103
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttct 68  Q
    |||||||||| |||  ||||||| ||||||||| |||||||||||| || |||||| |||||||||||    
T  50179170 tattgaaaatcgaaagtatttttggaaagaaaaattcaacccaaaagtgctgaaagaggtagttttct 50179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2291294 - 2291380
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||| | | ||||||| ||||||||| | || |||||||    |||||||||||||||| ||||||||||||||| ||||    
T  2291294 tattgaaaattaagggtattttttgaaagaaaaatccagcccaaaataactgaaaggggtagtttttttttatatatagtattgata 2291380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27866398 - 27866483
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||| ||| | |||||||| ||||||||  |||| |||||| || | |||||| |||||||| |||||||||||||||||||    
T  27866398 tattgaaaaatgagggtatttttaaaaagaaaaagtcaatccaaaagtgctaaaagggatagttttc-tttatatatagtatagata 27866483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46620856 - 46620925
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | ||||||| |||  |||| | |||||||||| ||||||||||| |||||||||||    
T  46620856 tattgaaaattgagggtatttttggaagaaaaaatccaacccaaaattgttgaaagggatagttttcttt 46620925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 49358043 - 49357990
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||| ||||||||||| |||||||||| | |||||||||||| ||||||||    
T  49358043 tatttttggaaagaaaagtccaacccaaaagttttgaaaggggtatttttcttt 49357990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 5190258 - 5190179
Alignment:
Q  3 ttgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||| | | ||||||| |||  |||| | |||||| |||||| ||||||||||||||||| |||||||||||||||    
T  5190258 ttgaaaatttagggtatttttggaagaaaaaatacaaccctaaaatgctgaaaggggtagttttc-tttatatatagtata 5190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 21796096 - 21796045
Alignment:
Q  35 ttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||    
T  21796096 ttcaacccaaaaatgctgaaaggggtagttttc-tttatacataatatagata 21796045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 32779138 - 32779220
Alignment:
Q  3 ttgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||||||||||| ||| ||||| | |||||| ||||||||| |||   | |||||| |||||||||||||||||||    
T  32779138 ttgaaaattgaagatatttttggaaggaaaaatccaaccc-aaaatgttggaagaaattgttttc-tttatatatagtatagata 32779220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27104112 - 27104199
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagata 87  Q
    ||||||||||||| | |||||||  |||||||| || | ||||||| |||||||| || |||||| |||| |||||| ||||||||||    
T  27104112 tattgaaaattgagggtatttttgaaaagaaaaatttagcccaaaagtgttgaaaaggatagtttactttatatataaagtatagata 27104199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43491310 - 43491228
Alignment:
Q  1 tattgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||| ||| | ||||||| ||||| |||| | |||| ||||| || ||||||||||||||||| |||||||||||||||    
T  43491310 tattgaaaaatgagggtatttttggaaaggaaaaatccaactcaaaagtgctgaaaggggtagttttc-tttatatatagtata 43491228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3729369 - 3729297
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||| ||||||||| | |||||||||| |||  ||||| || ||||||||||| |||||||||||||||||    
T  3729369 tatttttggaaagaaaattccaacccaaaagtgtgttgaaatggatagttttcttt-atatatagtatagatat 3729297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 44814401 - 44814345
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttctttt 71  Q
    ||||||| ||||||||||||| |||||||| |||  ||||| |||||||||||||||    
T  44814401 tatttttggaaagaaaagttctacccaaaagtgtgctgaaaagggtagttttctttt 44814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 54198486 - 54198560
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaa---atgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||||||||| ||||||   | |||||||| |||| ||||| ||||||||||||||| |||||    
T  54198486 tatttttggaaagaaaagttcaatccaaaaaatacgttgaaagaggtaattttc-tttatatatagtataaatata 54198560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6385243 - 6385187
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaagg 57  Q
    ||||||||||| | | ||||||| ||||||||| |||| ||||||| ||||||||||    
T  6385243 tattgaaaattaagggtatttttggaaagaaaaattcagcccaaaagtgttgaaagg 6385187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20702195 - 20702108
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||| |||||||| | | ||||| ||||||||| | ||||||||||  | ||||| ||||  |||||||| ||||||||||||||||||    
T  20702195 tattcaaaattgagggtgtttttggaaagaaaaatccaacccaaaagagctgaaaagggttattttcttt-atatatagtatagatata 20702108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15470615 - 15470529
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagat 86  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||| | ||||||||||| ||||||||||||||||    
T  15470615 tattgaaaattgaggatatttttagaaagaaaagtacagcccaaaagtgttgaaagagatagttttctttatatatatagtatagat 15470529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 11321469 - 11321539
Alignment:
Q  20 ttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||| ||||||||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  11321469 ttttggaaagaaaagtccaacccaaaagtgtgctgaaaggggtagttttcttt-atatatagtatagatata 11321539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21094247 - 21094334
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | ||||||| ||||||||| | |||||||||| || ||||  ||||||||||| ||||||||||||||| |||||    
T  21094247 tattgaaaattgagggtatttttggaaagaaaaatccaacccaaaagtgctgaattgggtagttttc-tttatatatagtataaatata 21094334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20045201 - 20045115
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||||| |  |||||| ||||||||| ||||||||||||  | | ||||||||||||||| ||||||||||||||| ||||    
T  20045201 tattgaaaattgagggaatttttggaaagaaaaattcaacccaaaagagctaaaaggggtagttttc-tttatatatagtataaatat 20045115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2750186 - 2750271
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||| |    |||||| |||||||||| |||||||||||||||||||    
T  2750186 tattgaaaattgaaggtatttttggaaagaaaaatccaacccaacagaactgaaagtggtagttttc-tttatatatagtatagata 2750271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2275933 - 2276020
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagata 87  Q
    ||||||||||||| |  |||||| ||||||||| |||  ||||||  ||||||||| ||||||||||||| ||||||| |||||||||    
T  2275933 tattgaaaattgagggcatttttggaaagaaaaattcggcccaaacgtgttgaaagaggtagttttctttatatatattgtatagata 2276020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20034790 - 20034705
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||||| |  |||||| ||||||||| | ||||||||||  | |||||| ||||||||||||| |||||||||||||||||    
T  20034790 tattgaaaattgagggaatttttggaaagaaaa-tccaacccaaaagagctgaaagaggtagttttcttt-atatatagtatagatat 20034705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 45022635 - 45022716
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||| ||| ||||||| ||||||||||||||| || ||| |||  |||||||| |||||||| ||||||||||||||||||    
T  45022635 aaaattaaaggtattttttgaaagaaaagttcaatcctaaagtgtgctgaaagggatagttttc-tttatatatagtatagat 45022716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46671466 - 46671377
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaa 91  Q
    |||| |||||||| |  ||||||  |||||||| | || |||||||  |||||| ||||||||||| ||||||||||||||||||||||||    
T  46671466 tattcaaaattgaggtcatttttgaaaagaaaaatccagcccaaaatagttgaagggggtagtttt-ttttatatatagtatagatataaa 46671377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 4550182 - 4550114
Alignment:
Q  17 tatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||| ||||| |||| |||| ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  4550182 tatttttcgaaaggaaaaattcagcccaaaagtgttgaaagaggtagttttc-tttatatatagtataga 4550114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6475009 - 6475053
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaa 45  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||    
T  6475009 tatttaaaattgaaggtatttttagaaagaaaaattcaacccaaa 6475053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7956939 - 7956998
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggt 60  Q
    |||||||||||||||  |||||| ||||||||| |||| |||||||  ||||||||||||    
T  7956939 tattgaaaattgaaggcatttttggaaagaaaaattcagcccaaaagagttgaaaggggt 7956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 9302084 - 9302015
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtataga 85  Q
    |||||||  |||||||||| |||||||||| |||  ||||||||||||||||| |||||||||| ||||||    
T  9302084 tatttttgaaaagaaaagtccaacccaaaagtgtgctgaaaggggtagttttc-tttatatataatataga 9302015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 9306522 - 9306453
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtataga 85  Q
    |||||||  |||||||||| |||||||||| |||  ||||||||||||||||| |||||||||| ||||||    
T  9306522 tatttttgaaaagaaaagtccaacccaaaagtgtgctgaaaggggtagttttc-tttatatataatataga 9306453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 20045050 - 20044989
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    |||||||| | ||||||||||  | ||||||||||||||||| |||| |||||||||||||||    
T  20045050 aaagaaaaatccaacccaaaagagctgaaaggggtagttttc-tttacatatagtatagatat 20044989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2275247 - 2275163
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttc-aacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||||||||| | ||||||| |||||||||  || ||| ||||| || |||||| |||||| ||| |||||||||||||||||    
T  2275247 tattgaaaattgagggtatttttggaaagaaaaaatctaactcaaaagtgatgaaagaggtagtcttc-tttatatatagtataga 2275163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 25801743 - 25801783
Alignment:
Q  51 tgaaaggggtagttttcttttatatatagtatagatataaat 92  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  25801743 tgaaaggggtagttttc-tttatatatagtataaatataaat 25801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 9329669 - 9329599
Alignment:
Q  20 ttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||| ||||||||| | |||||||||| |||  ||||| ||||||||||| ||||||||||||||| |||||    
T  9329669 tttttgaaagaaaaatccaacccaaaagtgtgttgaaaagggtagttttc-tttatatatagtatatatata 9329599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 47220879 - 47220824
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttt 70  Q
    ||||||| |||||||||||| ||||||||| |||  |||||| |||||||||||||    
T  47220879 tatttttggaaagaaaagtttaacccaaaagtgtcatgaaagaggtagttttcttt 47220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43577189 - 43577272
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||||||||| | ||||||| ||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  43577189 tattgaaaattgagggtattttttgaaagaaaagtccaacccaaaagtgtagaaaggggtagttttc-tttatatatagtataga 43577272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 48995718 - 48995801
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||| | |||||||  |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  48995718 attgaaaattgagggtatttttgaaaagaaaaattcaacccaaaaatgttgaaaggagtagttttc-tttatatatagcatagat 48995801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 46879917 - 46879852
Alignment:
Q  20 ttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  46879917 ttttagaaagaaaagtccaacccaaaaatgtttaaaggggtaattttc-tttatatatagtatagat 46879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8007278 - 8007191
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | |||||||  |||||||| |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||    
T  8007278 tattgaaaattgagggtatttttgaaaagaaaaattcaacccaaaagtgctgaaagggatagttttc-tttatgtatagtatagatata 8007191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37706263 - 37706345
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatag 84  Q
    ||||||||||||| | |||||||  |||||||| |||| ||||||| |||||||||||||| ||||| ||||||||||||||||    
T  37706263 tattgaaaattgagggtatttttgaaaagaaaaattcatcccaaaagtgttgaaaggggtaattttc-tttatatatagtatag 37706345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16143689 - 16143758
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| ||||||||| ||||||||| | ||||||||||||| |||||||  |||||||||||    
T  16143689 tattgaaaattgaggatatttttggaaagaaaaatccaacccaaaaatgctgaaaggaatagttttcttt 16143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 50946430 - 50946518
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataa 90  Q
    |||| |||||||| | ||||||||||||||||| | |||| ||||| || ||||||  ||||||||| ||||||||||||||||||||||    
T  50946430 tattaaaaattgagggtatttttagaaagaaaaatccaactcaaaagtgctgaaagatgtagttttc-tttatatatagtatagatataa 50946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 4393 - 4475
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||| | ||||||||| ||||||||||| ||||||||||  ||| ||||||||||||||||| |||||||||| ||||||||    
T  4393 aaaattaaggatatttttggaaagaaaagtccaacccaaaagtatgctgaaaggggtagttttc-tttatatataatatagata 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 49162524 - 49162456
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    |||||||||||| | |||| || ||||||||| |||||||||||| || ||||||||||||||||||||    
T  49162524 attgaaaattgagggtattgttggaaagaaaaattcaacccaaaagtgctgaaaggggtagttttcttt 49162456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13603072 - 13602984
Alignment:
Q  5 gaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaatcaa 95  Q
    ||||||||||| ||||||| |||  |||| |||| ||||||||||||||||||| || ||||| |||||||||| ||||||| ||||||||    
T  13603072 gaaaattgaaggtatttttggaagaaaaaattcagcccaaaaatgttgaaagggttaattttc-tttatatataatatagat-taaatcaa 13602984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8096042 - 8095973
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||| | | ||||||| ||||||||| | ||||||||||||| ||||| ||||||||||||||    
T  8096042 tattgaaaatttagggtatttttggaaagaaaaatccaacccaaaaatgctgaaatgggtagttttcttt 8095973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 773591 - 773508
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||||||||| | |||||||  || ||| ||| |||||||||||| ||||||| |||||||||| || ||||||||||||||    
T  773591 tattgaaaattgagggtatttttgaaaggaacagtccaacccaaaaatattgaaagaggtagttttc-ttgatatatagtataga 773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37231310 - 37231389
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagta 81  Q
    ||||||||||| | || |||||| |||| |||| |||||||||||| |  ||||||||||||||||| |||||||||||||    
T  37231310 tattgaaaattaaggacatttttggaaataaaaattcaacccaaaagtactgaaaggggtagttttc-tttatatatagta 37231389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 46022178 - 46022095
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||| | |||||||  |||||||| ||||||||||||||  |||||||  |||||||| ||||||||||| ||||||    
T  46022178 attgaaaattgagggtatttttgaaaagaaaaattcaacccaaaaatactgaaaggaatagttttc-tttatatatagcatagat 46022095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27307909 - 27307979
Alignment:
Q  1 tattgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | ||||||| ||||| ||||  ||| ||||||| |||||||||||||||||||||||    
T  27307909 tattgaaaattgagggtatttttggaaaggaaaaagtcagcccaaaagtgttgaaaggggtagttttcttt 27307979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31844942 - 31844857
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||||||||   ||||||| ||||||||| |||| |||||||||  |||||||| || ||||| |||||||||| ||||||||    
T  31844942 tattgaaaattgagcgtatttttggaaagaaaaattcagcccaaaaatactgaaagggataattttc-tttatatataatatagata 31844857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 29699372 - 29699443
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||| | |||||||||| |||  ||||| ||||||||||| |||||||||||||||||||    
T  29699372 tatttttggaaagaaaattccaacccaaaagtgtgttgaaaagggtagttttc-tttatatatagtatagata 29699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 43575382 - 43575449
Alignment:
Q  19 tttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||| ||||||||| ||||||||||||   |||||||||||||| ||||| |||||||||||||||||    
T  43575382 ttttttgaaagaaaatttcaacccaaaagtgtgttgaaaggggtaattttc-tttatatatagtataga 43575449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8528092 - 8528019
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgtt--gaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||| |  |||||||||||||   ||||||||||||||||||  ||||||||||||||||||    
T  8528092 tatttttggaaagaaaattctaacccaaaaatgtgccgaaaggggtagttttcttg-atatatagtatagatata 8528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52043103 - 52043018
Alignment:
Q  1 tattgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||||||| | | ||||||||||||| |||| |||| || |||| || |||||| |||||||||| ||| ||||||||||||||    
T  52043103 tattgaaaattaagggtatttttagaaaggaaaaattcagcctaaaagtgctgaaagaggtagttttc-tttgtatatagtatagat 52043018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 7297048 - 7297008
Alignment:
Q  48 tgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  7297048 tgttgaaagaggtagtttt-ttttatatatagtatagatata 7297008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 14494686 - 14494622
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttt-tatatata 78  Q
    ||||||| ||||||||||| |||||||||| |||  |||||||| ||||||||||| ||||||||    
T  14494686 tatttttggaaagaaaagtccaacccaaaagtgtgctgaaagggttagttttctttatatatata 14494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 14245819 - 14245748
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||||||||||| |||||||||| | ||| ||| || |||  ||||||||||||| ||||||||||| |||||    
T  14245819 tatttttagaaataaaagttcaatctaaatatggtggaagaagtagttttctttt-tatatagtatatatata 14245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51834123 - 51834210
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagatat 88  Q
    ||||||||||||| | ||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  51834123 tattgaaaattgagggtatttttggaaagaaaaattcaactcaaaagtgttgaaaggggtagttttctttatat-tatagtatagatat 51834210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28370242 - 28370156
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaagg-ggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| || |||||||||||||||| |||||||||||| |||||||||| |||||||||| ||||| |||| ||||||||    
T  28370242 tattgaaaattgatgacatttttagaaagaaaaattcaacccaaaagtgttgaaaggaggtagttttc-tttatgtatattatagata 28370156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28378060 - 28377974
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaagg-ggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| || |||||||||||||||| |||||||||||| |||||||||| |||||||||| ||||| |||| ||||||||    
T  28378060 tattgaaaattgatgacatttttagaaagaaaaattcaacccaaaagtgttgaaaggaggtagttttc-tttatgtatattatagata 28377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28385882 - 28385796
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaagg-ggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| || |||||||||||||||| |||||||||||| |||||||||| |||||||||| ||||| |||| ||||||||    
T  28385882 tattgaaaattgatgacatttttagaaagaaaaattcaacccaaaagtgttgaaaggaggtagttttc-tttatgtatattatagata 28385796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18722389 - 18722474
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| | ||||||| |||||||||  |||||| ||||||| ||||||||||||||||| ||||||||| |||||||||    
T  18722389 tattgaaaattgagggtatttttggaaagaaaaaatcaacctaaaaatgctgaaaggggtagttttc-tttatatattgtatagata 18722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13875317 - 13875240
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatag 79  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||| ||  ||||||| |||||||| |||||||||||    
T  13875317 tattgaaaattgaggatatttttggaaagaaaaattcaacccaaaagtgacgaaagggatagttttc-tttatatatag 13875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12673186 - 12673099
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    |||| |||||||||| || ||||  ||| |||| ||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||    
T  12673186 tattaaaaattgaaggtagttttgaaaataaaaattcaacccaaaaatgctgaaaggagtagttttc-tttatatataatatagatata 12673099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 7116162 - 7116235
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| |||||||||||  ||||||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  7116162 tatttttggaaagaaaagtcaaacccaaaagtgtgctgaaaggggtagttttcttt-atatatagtatagatata 7116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21078493 - 21078407
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttc-aacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | |||||||  ||||||||  || ||||||||| ||||||||||||||||||||||   |||||||||||||||||    
T  21078493 tattgaaaattgagggtatttttgaaaagaaaaaatccaacccaaaagtgttgaaaggggtagttttctt---tatatagtatagatata 21078407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 28096178 - 28096097
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||| ||| ||||||| ||| |||||||||||||||||| |||  |||||||| |||||||| ||||||||||||||||||    
T  28096178 aaaattaaaggtatttttggaaggaaaagttcaacccaaaagtgtgctgaaagggatagttttc-tttatatatagtatagat 28096097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14266161 - 14266080
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||||  || |||||||||||||||| | ||||||||||| | | ||||||||| |||| ||||||||||||||||    
T  14266161 tattgaaaattgttgacatttttagaaagaaaaatccaacccaaaaaagctaaaaggggtaatttt-ttttatatatagtata 14266080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22177206 - 22177121
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| | ||||||| ||| ||||| | ||| |||||| || ||||||||||||||||| |||||||||||||| ||||    
T  22177206 tattgaaaattgagggtatttttggaatgaaaaatccaatccaaaagtgctgaaaggggtagttttc-tttatatatagtattgata 22177121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35378915 - 35378828
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | ||||||| ||||||||| | ||||| |||| ||||||||| | || ||||| | |||||||||||||||||||    
T  35378915 tattgaaaattgagggtattttttgaaagaaaaatacaacctaaaagtgttgaaagagataattttc-tatatatatagtatagatata 35378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3422826 - 3422899
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||||| |||||||||| |||  ||||||||  ||||||| |||||||||||||||||||||    
T  3422826 tatttttggaaagaaaagtccaacccaaaagtgtgctgaaagggacagttttc-tttatatatagtatagatata 3422899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 42897051 - 42897124
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||| | |||| ||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  42897051 tatttttggaaagaaaaatccaacacaaaagtgtgctgaaaggggtagttttcttt-atatatagtatagatata 42897124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51834015 - 51834101
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||||| | ||||||| ||||||||| |||| |||| || || ||||||||||| ||||| |||||||||| |||| ||||    
T  51834015 tattgaaaattgagggtatttttggaaagaaaaattcagcccagaagtgctgaaaggggtaattttc-tttatatatactatatatat 51834101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22102258 - 22102173
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| | ||||||| ||| ||||| | ||| |||||| || |||||||| |||||||| |||||||||||||| ||||    
T  22102258 tattgaaaattgagggtatttttggaatgaaaaatccaatccaaaagtgctgaaagggatagttttc-tttatatatagtattgata 22102173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 37980603 - 37980534
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||| |||  |||||||||| |||||| | |||||||| |||||||||||||||||||    
T  37980603 tatttttggaaagaaaaattctgcccaaaaatgctgaaagagatagttttc-tttatatatagtatagata 37980534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 51005970 - 51005922
Alignment:
Q  42 caaaaatgttgaaaggggtagttttcttttatatatagtatagatataaa 91  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  51005970 caaaaatgctgaaaggggtagttttc-tttatatataatatagatataaa 51005922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 51139777 - 51139841
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttt-tatatata 78  Q
    |||||||  ||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  51139777 tatttttgaaaagaaaagttcaacccaaaagtgtgctgaaaggggtagttttctttatatatata 51139841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 3283537 - 3283601
Alignment:
Q  20 ttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtata 83  Q
    |||| ||||||||| |  ||||||||| || |||||||||||||||||||| |||||||||||||    
T  3283537 ttttggaaagaaaaatcaaacccaaaagtgctgaaaggggtagttttctttatatatatagtata 3283601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39904174 - 39904255
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatag 84  Q
    ||||||||||||  | ||||||| ||||||||| | ||||| |||| |||||||||  ||||||||| ||||||||||||||||    
T  39904174 tattgaaaattgtgggtattttt-gaaagaaaaatacaaccaaaaagtgttgaaagatgtagttttc-tttatatatagtatag 39904255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4617388 - 4617458
Alignment:
Q  1 tattgaaaattgaagatattttt-agaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | ||||||| |||| ||||| ||||  ||||||||| ||||||||||| ||||||||    
T  4617388 tattgaaaattgagggtattttttagaaggaaaaattcagtccaaaaatgctgaaaggggtaattttcttt 4617458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7638706 - 7638620
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||| |||||||||  ||||||||  ||| | |||||||  |||||  |||| |||| ||||| ||||||||||||||    
T  7638706 tattgaaaattgaggatatttttgtaaagaaaaaatcagcacaaaaatactgaaaaaggtaatttttttttacatatagtatagata 7638620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 18461561 - 18461615
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttctttt 71  Q
    |||||||  |||||||| |||||||||||| || |||||| ||||||||||||||    
T  18461561 tatttttgaaaagaaaaattcaacccaaaagtgctgaaagaggtagttttctttt 18461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21790723 - 21790808
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||| |||| | || |||| |||| |||| ||||  |||||| | ||||||| |||||||||| |||||||||||||||||||    
T  21790723 tattgaaatttgagggtaattttggaaataaaaattcattccaaaagtattgaaagaggtagttttc-tttatatatagtatagata 21790808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 37431340 - 37431259
Alignment:
Q  4 tgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||| || ||| ||||||||||||  ||  |||||||  |||||||||| | |||||| ||||||||||||||||||    
T  37431340 tgaaaattgaggacattgttagaaagaaaaagtccgcccaaaagagttgaaagggtttgttttc-tttatatatagtatagat 37431259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46732135 - 46732220
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||| |||||||| | ||||||   |||||||| |||| |  |||||||||||||| | |||||||| |||||||||||||||||||    
T  46732135 tattaaaaattgagggtattttagaaaagaaaaattcagcttaaaaatgttgaaagagatagttttc-tttatatatagtatagata 46732220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2368788 - 2368876
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaagggg-tagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | |||||||  |||||||| | ||||| |||||   | ||||||| ||||||||||| ||||||||||||||||||    
T  2368788 tattgaaaattgagggtatttttgaaaagaaaaatccaaccaaaaaaaactaaaaggggatagttttcttt-atatatagtatagatata 2368876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 7116291 - 7116362
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||||| |||| ||||| |||  ||||||| ||| |||||||| ||||||||||||||||    
T  7116291 tatttttggaaagaaaagtccaacgcaaaagtgtgctgaaaggagtatttttcttt-atatatagtatagata 7116362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23251385 - 23251453
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||| | |  |||||| ||||||||| |||||||||| |||| ||||| ||||||||||||||    
T  23251385 tattgaaaattaagggcatttttggaaagaaaaattcaacccaacaatgctgaaa-gggtagttttcttt 23251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 22004274 - 22004218
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttat 73  Q
    ||||||| ||| ||||| ||||| |||||| ||||||||||| ||||||| ||||||    
T  22004274 tatttttggaatgaaaaattcaatccaaaagtgttgaaagggatagttttattttat 22004218  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 22011791 - 22011735
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttat 73  Q
    ||||||| ||| ||||| ||||| |||||| ||||||||||| ||||||| ||||||    
T  22011791 tatttttggaatgaaaaattcaatccaaaagtgttgaaagggatagttttattttat 22011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22101533 - 22101462
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttt 70  Q
    |||| |||||| ||| |||||||  |||||||||||||||||||||   || |||||||| |||||||||||    
T  22101533 tatttaaaattaaaggtatttttgaaaagaaaagttcaacccaaaagtctgctgaaagggctagttttcttt 22101462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 22176462 - 22176407
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttt 70  Q
    |||||||  |||||||||||||||||||||   || ||||||||||||||||||||    
T  22176462 tatttttgaaaagaaaagttcaacccaaaagtctgctgaaaggggtagttttcttt 22176407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11323168 - 11323087
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||||| | ||||||| ||||||||| | ||||||||||||||| |||| |||||||||| |||||||||||||||    
T  11323168 tattgaaaattgagggtatttttggaaagaaaaatccaacccaaaaatgttcaaagaggtagttttc-tttatatatagtata 11323087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1190405 - 1190322
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||||||||| ||||||||||||||||||| | || | ||||| || |||||| |||||||||| |||||||||||||||||    
T  1190405 tattgaaaattgaggatatttttagaaagaaaaatccagcacaaaagtgctgaaagtggtagttttc-tttatatatagtataga 1190322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16186884 - 16186815
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | | ||||| ||||||||| | ||||| ||||||| ||||||||||||||||||||    
T  16186884 tattgaaaattgagggtgtttttggaaagaaaaatccaaccgaaaaatgctgaaaggggtagttttcttt 16186815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 2438947 - 2439020
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||||||||||||||||  ||| |||||  | |||||||| |||||||||||||||||||||    
T  2438947 tatttttggaaagaaaagttcaacccaaaagtatgctgaaaatgatagttttc-tttatatatagtatagatata 2439020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 2536953 - 2536875
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtata 83  Q
    |||||| ||| ||||||  ||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||||    
T  2536953 aaaattaaaggtattttgggaaagaaaagtccaacccaaaagtgtgctgaaagaggtagttttc-tttatatatagtata 2536875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6001608 - 6001699
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaatc 93  Q
    ||||||||||||  |  |||||||||||||||  | || ||||||||| ||||||||||||||| | ||||||| | ||||||||||| ||||    
T  6001608 tattgaaaattgcgggcatttttagaaagaaatatccagcccaaaaatattgaaaggggtagttat-ttttatacacagtatagatatgaatc 6001699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14910088 - 14910175
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| | |||||||  |||||||| ||||  |||||| || |||||| |||||||||| ||||||||||| || ||||||    
T  14910088 tattgaaaattgagggtatttttgaaaagaaaaattcagtccaaaagtgctgaaagaggtagttttc-tttatatatagcatggatata 14910175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 17590054 - 17590124
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||| ||||||||| |  |||||||||||||  |||||| |||||||||| ||||||||||||||||||    
T  17590054 tatttttggaaagaaaaatcgaacccaaaaatgtgctgaaagaggtagttttc-tttatatatagtatagat 17590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2485713 - 2485626
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagata 87  Q
    ||||||||||||| | |||||||  |||||||| || | ||||||| |||||||| || |||||| |||| |||||| ||||||||||    
T  2485713 tattgaaaattgagggtatttttgaaaagaaaaatttagcccaaaagtgttgaaaaggatagtttactttatatataaagtatagata 2485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2441262 - 2441184
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatata 78  Q
    ||||| ||||||| | ||||||| ||||||||| | |||   |||| ||||||||||||||||||||||| ||||||||    
T  2441262 tattggaaattgagggtatttttggaaagaaaaatccaattaaaaagtgttgaaaggggtagttttctttatatatata 2441184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14894690 - 14894609
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||| | | |||||||  |||||||| | |||||||||| || | ||| ||||||||||| |||||||||||||||    
T  14894690 tattgaaaattaagggtatttttgaaaagaaaaatccaacccaaaagtgctaaaaagggtagttttc-tttatatatagtata 14894609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20730183 - 20730098
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||| | | |||||||| |||||||| | || | ||| |||||| |||| |||||||||| ||||||||||| |||||||    
T  20730183 tattgaaaattaagggtatttttaaaaagaaaaatccagctcaataatgttaaaagtggtagttttc-tttatatatagcatagata 20730098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 24062109 - 24062042
Alignment:
Q  20 ttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    |||| |||| |||| |||||||||||   | |||||||| ||||||||||| |||||||||||||||||    
T  24062109 tttttgaaaaaaaaattcaacccaaaggagctgaaagggatagttttcttt-atatatagtatagatat 24062042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26527922 - 26528005
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    ||||||||||||| | || |||| ||||||||| | ||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  26527922 tattgaaaattgagggtaattttggaaagaaaaatccaacccaaaaatgctgaaaggggtagttttc-tttatacatagtataga 26528005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36342699 - 36342768
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    |||||||||||||   ||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||    
T  36342699 tattgaaaattgagagtattttttgaaagaaaaattcaatccaaaagtgttgaaaggggtagttttcttt 36342768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 38804846 - 38804929
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||| | ||||||| |||  |||| | |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  38804846 attgaaaattgagggtatttttggaagaaaaaatacaacccaaaagtgttgaaagggatagttttc-tttatatatagtatagat 38804929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28773479 - 28773390
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagtt---ttcttttatatatagtatagata 87  Q
    ||||||||||||| | ||||||| ||||||||| |||||| ||||| || ||||||||||||||   ||  |||||||||||||||||||    
T  28773479 tattgaaaattgagggtatttttggaaagaaaaattcaactcaaaagtgctgaaaggggtagttccctttctttatatatagtatagata 28773390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21307363 - 21307438
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatat 77  Q
    ||||||||||||| |  |||||| ||||||||| | ||||| ||||||| |||||||||||||||| ||||||||||    
T  21307363 tattgaaaattgagggcatttttggaaagaaaaatccaacctaaaaatgctgaaaggggtagtttt-ttttatatat 21307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4415295 - 4415379
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||||||||| ||||||||  |||||||| | |||  ||||||||||||||| |||| |||  ||||||||| ||||||||||    
T  4415295 tattgaaaattgaatatatttttgaaaagaaaaatccaattcaaaaatgttgaaagaggtaattt--ttttatatacagtatagata 4415379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 32889083 - 32889010
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||||||||||||| |||| |||  |||||||| |||||||| ||||| |||||||||||||||    
T  32889083 tatttttggaaagaaaagttcaacctaaaagtgtgctgaaagggatagttttc-tttatctatagtatagatata 32889010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28969879 - 28969960
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||| | | ||||||| ||||||||| |  ||||| ||| || ||||||||||||||||| |||||||||||||||    
T  28969879 tattgaaaatttagggtatttttggaaagaaaaatctaaccccaaagtgctgaaaggggtagttttc-tttatatatagtata 28969960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33100003 - 33100087
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||| |||||||| | |||||||| ||| ||||  |||||||||||  |||||||||||| |||||| |||||||||||||||||||    
T  33100003 tattcaaaattgagggtatttttaaaaataaaaagtcaacccaaaagagttgaaaggggt-gttttc-tttatatatagtatagata 33100087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33480701 - 33480616
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagat 86  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||||| || |||||   |||||||||||| |||||||| |||||||    
T  33480701 tattgaaaattaaggatatttttggaaagaaaa-ttcaacccaaaagtgctgaaaaatgtagttttctttatatatataatatagat 33480616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 43921998 - 43921933
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaat 92  Q
    |||||||| | ||||||||||  | |||||||||| ||||||||| |||||||||||||||||||||    
T  43921998 aaagaaaaatccaacccaaaagaggtgaaaggggttgttttcttt-atatatagtatagatataaat 43921933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2692276 - 2692345
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | ||||||| |||| ||||   ||||||||||| | ||||||||||||||||||||    
T  2692276 tattgaaaattgagggtatttttggaaataaaaaaccaacccaaaaaagctgaaaggggtagttttcttt 2692345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 10866559 - 10866639
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    |||||||||||| |  ||||||  |||||||| | |||| ||||||||||| ||| |||||||||| |||||||||||||||    
T  10866559 attgaaaattgagggcatttttgtaaagaaaaatccaactcaaaaatgttgtaagaggtagttttc-tttatatatagtata 10866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 15318259 - 15318342
Alignment:
Q  3 ttgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||| | |||||||  |||||||| ||||| |||||| ||||| || ||||||||||| ||| ||||||||||||||||    
T  15318259 ttgaaaattgagggtatttttgaaaagaaaaattcaaaccaaaagtgttg-aatgggtagttttc-tttgtatatagtatagatat 15318342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 15498628 - 15498711
Alignment:
Q  3 ttgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatat 88  Q
    ||||||||||| | |||||||  |||||||| ||||| |||||| ||||| || ||||||||||| ||| ||||||||||||||||    
T  15498628 ttgaaaattgagggtatttttgaaaagaaaaattcaaaccaaaagtgttg-aatgggtagttttc-tttgtatatagtatagatat 15498711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41942717 - 41942786
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||||||||| | |||||||  |||||||| ||||||  |||||| ||||||| |||||||||||||    
T  41942717 tattgaaaattgatggtatttttgaaaagaaaaattcaactaaaaaatattgaaagtggtagttttcttt 41942786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 45488781 - 45488721
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||| | |||||||||||   ||||||||||||||||| |||||||||||||||||||    
T  45488781 aaagaaaaatccaacccaaaaaaactgaaaggggtagttttc-tttatatatagtatagata 45488721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 26528101 - 26528047
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaa--tgttgaaaggggtagttttcttt 70  Q
    ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  26528101 tatttttggaaagaaaagttcaacccaaaaatgtgttgaaa-gggtagttttcttt 26528047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1526362 - 1526452
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaat 92  Q
    |||||||||||||||  ||||||| ||| ||||  |||||||||||| |||||||| | |  ||||| |||||||||| |||| ||||||||    
T  1526362 tattgaaaattgaaggcatttttaaaaaaaaaaagtcaacccaaaaaagttgaaagtgattcttttc-tttatatataatataaatataaat 1526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1759790 - 1759869
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||| | | ||||||| |||||||||  ||| ||||||||||||||||  |||||||||| |||||||||| ||||    
T  1759790 tattgaaaattaagggtatttttcgaaagaaaaaatcagcccaaaaatgttgaaa--ggtagttttc-tttatatataatata 1759869  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23085272 - 23085213
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggt 60  Q
    |||||||||||||||| ||||||  ||||||||  |||||||||||| | ||||||||||    
T  23085272 tattgaaaattgaagacatttttgcaaagaaaaagtcaacccaaaaaagctgaaaggggt 23085213  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 32889202 - 32889137
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagta 81  Q
    |||||||  ||||||||||||||||||||| |||  |||||||| |||||||| |||||||||||||    
T  32889202 tatttttgaaaagaaaagttcaacccaaaagtgtgctgaaagggatagttttc-tttatatatagta 32889137  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8516054 - 8516139
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||| |||  ||||||||  |||| ||| |||||  |||||  |||||||| |||||||||| |||||||||||||||||||    
T  8516054 tattgaaaaatgagaatatttttgaaaagtaaaattcaattcaaaagagttgaaagaggtagttttc-tttatatatagtatagata 8516139  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8518133 - 8518218
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||| |||  ||||||||  |||| ||| |||||  |||||  |||||||| |||||||||| |||||||||||||||||||    
T  8518133 tattgaaaaatgagaatatttttgaaaagtaaaattcaattcaaaagagttgaaagaggtagttttc-tttatatatagtatagata 8518218  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36802202 - 36802121
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    |||| |||||| ||| ||||||| ||||||||| |||  ||||||| || |||||| | |||||||| |||||||||||||||    
T  36802202 tattaaaaattaaaggtatttttggaaagaaaaattctgcccaaaagtgctgaaagagatagttttc-tttatatatagtata 36802121  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 37401970 - 37402039
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||| |||  ||||||| || |||||| | |||||||| |||||||||||||||||||    
T  37401970 tatttttggaaagaaaaattctgcccaaaagtgctgaaagagatagttttc-tttatatatagtatagata 37402039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 11903802 - 11903741
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagat 86  Q
    |||||||| |||||||||||| || |||||   |||||||||||| ||||||||||||||||    
T  11903802 aaagaaaaattcaacccaaaagtgctgaaaaatgtagttttctttatatatatagtatagat 11903741  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20286746 - 20286834
Alignment:
Q  1 tattgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| |||||||||  |||| ||||  |||||||||||  | |||||| | | |||||| |||||||||||||||||||||    
T  20286746 tattgaaaattgatgatatttttgaaaagaaaaaagtcaacccaaaagagctgaaagagattgttttc-tttatatatagtatagatata 20286834  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21073375 - 21073463
Alignment:
Q  1 tattgaaaattgaagatatttttagaaag-aaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||||||||| |||||||||  |||| ||||  |||||||||||  | |||||| | | |||||| |||||||||||||||||||||    
T  21073375 tattgaaaattgatgatatttttgaaaagaaaaaagtcaacccaaaagagctgaaagagattgttttc-tttatatatagtatagatata 21073463  T

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Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 17406 - 17476
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||| ||||||||| |||||||||||| |||  ||||||||||||||||| ||||||||||||||||||    
T  17406 tatttttggaaagaaaatttcaacccaaaagtgtgttgaaaggggtagttttc-tttatatatagtatagat 17476  T

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Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 51608 - 51529
Alignment:
Q  9 attgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatata 89  Q
    ||||||| ||||||| ||||||||||| ||| |||||| |||||||||| ||||||||| ||||||||||  |||||||||    
T  51608 attgaaggtatttttggaaagaaaagtccaatccaaaagtgttgaaaggtgtagttttc-tttatatataagatagatata 51529  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 629446 - 629363
Alignment:
Q  2 attgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    |||||||||||| | |||||||  |||||||| ||||||||||||||| |||||||  |||||||| ||||||||||| ||||||    
T  629446 attgaaaattgagggtatttttgaaaagaaaaattcaacccaaaaatgctgaaaggaatagttttc-tttatatatagcatagat 629363  T

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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21839469 - 21839419
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgtt 51  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  21839469 tattgaaaattgaaggtatttttagaaagaaaaattcagcccaaaaatgtt 21839419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24896363 - 24896276
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttata--tatagtatagat 86  Q
    ||||||||||||| | ||||||||||||||||| | || |||||||  ||| ||||  ||||||||||||||||  ||||||||||||    
T  24896363 tattgaaaattgagggtatttttagaaagaaaaatccagcccaaaagagtttaaagatgtagttttcttttatatgtatagtatagat 24896276  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8063242 - 8063309
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttct 68  Q
    ||||||||||||| | ||||||| ||||||||| ||||| ||||||||| |||||  |||||||||||    
T  8063242 tattgaaaattgagggtattttttgaaagaaaaattcaatccaaaaatgctgaaattggtagttttct 8063309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3357588 - 3357673
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||||||||||   ||||||||||||||||| | |||| ||||| || | |||||| |||||||| ||| |||||||||||||||    
T  3357588 tattgaaaattgagcgtatttttagaaagaaaaatccaacacaaaagtgcttaaagggatagttttc-tttgtatatagtatagata 3357673  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 19901631 - 19901696
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||| ||||||||||| |||||||||| || |||||| | |||||||| |||||||||||||||    
T  19901631 tatttttggaaagaaaagtccaacccaaaagtgatgaaagtgatagttttc-tttatatatagtata 19901696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 2221963 - 2221907
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttctttt 71  Q
    ||||||| |||||||||||||||||||||| |||  |||||||||||||||| ||||    
T  2221963 tatttttggaaagaaaagttcaacccaaaagtgtgctgaaaggggtagttttttttt 2221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 25048172 - 25048235
Alignment:
Q  25 gaaagaaaagttcaacccaaaaa--tgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||| ||||| ||||   |||||||||||||||||||| |||||||||||||||||||    
T  25048172 gaaagaaaagtccaacctaaaagcgtgttgaaaggggtagttttc-tttatatatagtatagata 25048235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 44973124 - 44973188
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttt-tatatata 78  Q
    ||||||||||||||||||| ||||| |||| |||  |||||||||||||||||||| ||||||||    
T  44973124 tatttttagaaagaaaagtccaacctaaaagtgtgctgaaaggggtagttttctttatatatata 44973188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 35193622 - 35193703
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagata 87  Q
    |||||| | ||||||||| ||||||||| | |||||||||| |||  |||||||| ||||||||||| ||||||||||||||||    
T  35193622 aaaattaaggatatttttggaaagaaaattccaacccaaaattgtgctgaaaggg-tagttttcttt-atatatagtatagata 35193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39271864 - 39271947
Alignment:
Q  1 tattgaaaattgaagatatttttagaaaga--aaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagta 81  Q
    |||||||||||||   ||||||| ||||||  ||| ||||||||||||||| |||||||| | ||||||||| |||||||||||    
T  39271864 tattgaaaattgagagtatttttggaaagagaaaaattcaacccaaaaatgctgaaagggtttgttttctttatatatatagta 39271947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 21839400 - 21839357
Alignment:
Q  36 tcaacccaaaaatgttgaaaggggtagttttcttt-tatatata 78  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  21839400 tcaacccaaaaatgttgaaaggggtaattttctttatatatata 21839357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 21956557 - 21956495
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatata 78  Q
    |||||||  |||||||||| |||||||||| ||||||||| | ||||||||||| ||||||||    
T  21956557 tatttttgaaaagaaaagtccaacccaaaagtgttgaaagagatagttttctttatatatata 21956495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 40324130 - 40324199
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||| ||||||||| |||  ||||||| || |||||| | |||||||| |||||||||||||||||||    
T  40324130 tatttttggaaagaaaaattctgcccaaaagtgctgaaagagatagttttc-tttatatatagtatagata 40324199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 309731 - 309660
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatagtatagata 87  Q
    ||||||||||||||||||||||| |  ||| |||  ||||| || |||||||| |||||||||||||||||||    
T  309731 tatttttagaaagaaaagttcaatcagaaagtgtggtgaaatggatagttttc-tttatatatagtatagata 309660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7061493 - 7061426
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagtata 83  Q
    |||||||  |||||||||||||||||||||   || ||||| ||||||||||| |||||||||||||||    
T  7061493 tatttttgaaaagaaaagttcaacccaaaagtctgatgaaaagggtagttttc-tttatatatagtata 7061426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40499580 - 40499668
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataa 90  Q
    |||| |||||||| |  ||||||  ||||||||  ||| ||||||||  |||||||||||  |||||||| |||||||||||||||||||    
T  40499580 tattcaaaattgagggcatttttgaaaagaaaaagtcatcccaaaaaatttgaaaggggttattttcttt-atatatagtatagatataa 40499668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 44539713 - 44539776
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgt--tgaaaggggtagttttcttttatatatag 79  Q
    ||||||| |||||||||||||||||||||| |||  ||||| || |||||||| |||||||||||    
T  44539713 tatttttggaaagaaaagttcaacccaaaagtgtgctgaaatggatagttttc-tttatatatag 44539776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 15495994 - 15495951
Alignment:
Q  41 ccaaaaatgttgaaaggggtagttttcttttatatatagtataga 85  Q
    |||||| || ||||||||||||||||| |||||||||||||||||    
T  15495994 ccaaaagtgctgaaaggggtagttttc-tttatatatagtataga 15495951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40633667 - 40633731
Alignment:
Q  4 tgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttct 68  Q
    |||||||| | | ||||||| ||||||||| | ||||||||||||| || |||||||||| ||||    
T  40633667 tgaaaattaagggtatttttggaaagaaaaatccaacccaaaaatgctggaaggggtagtattct 40633731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 48344 - 48298
Alignment:
Q  26 aaagaaaagttcaacccaaaaatgttgaaaggggtagttttctttta 72  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||    
T  48344 aaagaaaagtccaacccaaaaatgttgaaagcggtagttttctttta 48298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 131729 - 131641
Alignment:
Q  5 gaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagatataaatcaa 95  Q
    ||||||||||| ||||||| |||  |||| |||| ||||||||||||||||||| || ||||| |||||||||| ||||||| ||||||||    
T  131729 gaaaattgaaggtatttttggaagaaaaaattcagcccaaaaatgttgaaagggttaattttc-tttatatataatatagat-taaatcaa 131641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5979 - 6064
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt-tatatatagtatagat 86  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||||| || |||||   |||||||||||| |||||||| |||||||    
T  5979 tattgaaaattaaggatatttttggaaagaaaa-ttcaacccaaaagtgctgaaaaatgtagttttctttatatatataatatagat 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47440 - 47521
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtata 83  Q
    ||||||||||||| | || ||||   ||||||| |||||||||||| || ||||||||||||||||| ||||| |||||||||    
T  47440 tattgaaaattgagggtagttttgagaagaaaaattcaacccaaaagtgctgaaaggggtagttttc-tttatgtatagtata 47521  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 11572 - 11648
Alignment:
Q  6 aaaattgaagatatttttagaaagaaaagttcaacccaaaa--atgttgaaaggggtagttttcttttatatatagta 81  Q
    |||||| | ||||||||| ||||||||||| ||||||||||  ||| |||||||| || ||||| |||||||||||||    
T  11572 aaaattaaggatatttttggaaagaaaagtccaacccaaaagtatgctgaaagggttaattttc-tttatatatagta 11648  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 254450 - 254365
Alignment:
Q  1 tattgaaaattgaagatatttttagaaagaaaag-ttcaacccaaaaatgttgaaaggggtagttttcttttatatatagtatagat 86  Q
    ||||||||| ||| | |||||||  ||||||||  |||| | ||||| || ||||||||||||||||| ||||||||||||||||||    
T  254450 tattgaaaactgagggtatttttgaaaagaaaaaattcagctcaaaagtgctgaaaggggtagttttc-tttatatatagtatagat 254365  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 56358 - 56305
Alignment:
Q  17 tatttttagaaagaaaagttcaacccaaaaatgttgaaaggggtagttttcttt 70  Q
    ||||||| ||||||||||| |||||||||| || ||||||| |||||| |||||    
T  56358 tatttttggaaagaaaagtccaacccaaaagtgatgaaaggagtagttatcttt 56305  T

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