View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19321_high_2 (Length: 319)
Name: NF19321_high_2
Description: NF19321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19321_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 4094305 - 4094611
Alignment:
| Q |
1 |
acagtcacaaattaatccttgttcctatactcatttaaagaacctttcatactaaagctttcaagtgtaattaattacataaggctaattgtaccaacca |
100 |
Q |
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| T |
4094305 |
acagtcacaaattaatccttgttcctatactcatttaaagaacctttcatactaaagctttcaagtgtaattaattacataaggctaattgtaccaacca |
4094404 |
T |
|
| Q |
101 |
atttaattgtttgtttctcctagttacactaattcttttaatcagcattatgcctaattgaggtttcttttccactatgaaatggtaaaagaaaaatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4094405 |
atttaattgtttgtttctcctagttacactaattcttttaatcagcattatgcctaattgaggtttcttttccactatgaaatggtaaaagaaaaatatt |
4094504 |
T |
|
| Q |
201 |
ccaaaaccattaggtgaaacatcactgagagaaactgatggatgttaaatactcagcataataattagtgtttatgtttgaaaaatccaatcattcatct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
4094505 |
ccaaaaccattaggtgaaacatcactgagagaaactgatggatgttaaatactcagcataataattagtgtgtatgtttgaaaaatccaatcattcatct |
4094604 |
T |
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| Q |
301 |
agatatt |
307 |
Q |
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||||||| |
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| T |
4094605 |
agatatt |
4094611 |
T |
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