View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19322_high_1 (Length: 572)

Name: NF19322_high_1
Description: NF19322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19322_high_1
NF19322_high_1
[»] chr4 (60 HSPs)
chr4 (1-572)||(25026341-25026906)
chr4 (232-361)||(45532578-45532708)
chr4 (230-362)||(4586756-4586889)
chr4 (232-361)||(32175736-32175866)
chr4 (232-364)||(55309208-55309342)
chr4 (232-360)||(19839187-19839316)
chr4 (236-360)||(9670479-9670604)
chr4 (234-344)||(2275694-2275805)
chr4 (232-360)||(5473857-5473986)
chr4 (236-344)||(29625337-29625446)
chr4 (236-360)||(38645762-38645887)
chr4 (234-361)||(12071972-12072100)
chr4 (230-361)||(13028815-13028947)
chr4 (232-363)||(38223518-38223650)
chr4 (236-363)||(38619859-38619987)
chr4 (230-360)||(54539292-54539423)
chr4 (230-359)||(4627079-4627209)
chr4 (232-365)||(19680419-19680553)
chr4 (236-346)||(9239295-9239406)
chr4 (232-361)||(13564914-13565044)
chr4 (236-360)||(7111946-7112071)
chr4 (236-324)||(14944758-14944846)
chr4 (230-360)||(18714908-18715039)
chr4 (234-360)||(22168278-22168405)
chr4 (232-354)||(37378629-37378752)
chr4 (239-344)||(9238641-9238747)
chr4 (232-360)||(27040025-27040154)
chr4 (236-360)||(30507999-30508124)
chr4 (232-327)||(25147729-25147824)
chr4 (232-361)||(30268987-30269117)
chr4 (232-361)||(30283072-30283202)
chr4 (241-361)||(44783499-44783621)
chr4 (232-361)||(46286228-46286358)
chr4 (232-344)||(36689685-36689798)
chr4 (232-324)||(5399617-5399709)
chr4 (232-324)||(22128349-22128441)
chr4 (232-353)||(18051847-18051969)
chr4 (232-344)||(30568015-30568128)
chr4 (236-360)||(42055409-42055534)
chr4 (244-359)||(24682328-24682444)
chr4 (234-313)||(22156649-22156728)
chr4 (236-360)||(12105995-12106119)
chr4 (232-324)||(18744107-18744199)
chr4 (235-360)||(9913269-9913395)
chr4 (230-288)||(45091280-45091338)
chr4 (232-344)||(1638455-1638568)
chr4 (232-324)||(8878891-8878983)
chr4 (232-324)||(33914067-33914159)
chr4 (232-288)||(37761915-37761971)
chr4 (239-324)||(9058989-9059074)
chr4 (236-362)||(4606827-4606954)
chr4 (232-324)||(34557191-34557283)
chr4 (246-318)||(3613017-3613089)
chr4 (236-324)||(6553816-6553904)
chr4 (232-324)||(29238431-29238523)
chr4 (254-324)||(313617-313687)
chr4 (232-320)||(16915377-16915465)
chr4 (232-300)||(25225107-25225175)
chr4 (245-360)||(30420033-30420149)
chr4 (232-322)||(39234950-39235039)
[»] chr6 (73 HSPs)
chr6 (230-360)||(15448393-15448524)
chr6 (232-354)||(25398012-25398135)
chr6 (232-361)||(28364921-28365051)
chr6 (232-360)||(9892973-9893102)
chr6 (232-361)||(15364457-15364587)
chr6 (232-360)||(495627-495756)
chr6 (232-360)||(20182155-20182284)
chr6 (232-360)||(22153707-22153836)
chr6 (232-363)||(22579346-22579478)
chr6 (236-361)||(15961406-15961532)
chr6 (232-360)||(2669319-2669448)
chr6 (234-360)||(6598476-6598603)
chr6 (232-370)||(16250792-16250931)
chr6 (232-361)||(21990174-21990303)
chr6 (234-361)||(24661008-24661136)
chr6 (234-361)||(33250707-33250835)
chr6 (232-354)||(21140949-21141072)
chr6 (234-360)||(26224440-26224567)
chr6 (236-361)||(28668114-28668240)
chr6 (236-360)||(6605496-6605621)
chr6 (232-360)||(12351586-12351715)
chr6 (234-361)||(11049750-11049878)
chr6 (234-361)||(12160846-12160973)
chr6 (236-354)||(5192195-5192314)
chr6 (234-360)||(26939599-26939726)
chr6 (232-322)||(27705432-27705522)
chr6 (234-342)||(2992627-2992736)
chr6 (245-361)||(6978300-6978417)
chr6 (236-344)||(12499230-12499339)
chr6 (236-344)||(12506559-12506668)
chr6 (236-344)||(12509562-12509671)
chr6 (232-360)||(30833960-30834089)
chr6 (244-359)||(5360431-5360547)
chr6 (234-359)||(27796835-27796961)
chr6 (234-354)||(12200706-12200827)
chr6 (236-320)||(13145016-13145100)
chr6 (232-324)||(22083848-22083940)
chr6 (245-363)||(1939239-1939358)
chr6 (251-325)||(17919565-17919639)
chr6 (232-324)||(343600-343692)
chr6 (236-324)||(11077663-11077751)
chr6 (232-324)||(12845013-12845105)
chr6 (232-324)||(12951718-12951810)
chr6 (254-353)||(15509188-15509288)
chr6 (244-324)||(18492391-18492471)
chr6 (236-315)||(19175823-19175902)
chr6 (232-361)||(11530235-11530365)
chr6 (232-310)||(18033576-18033654)
chr6 (236-359)||(10458778-10458902)
chr6 (236-324)||(14872133-14872221)
chr6 (232-320)||(23281796-23281884)
chr6 (236-303)||(11350196-11350263)
chr6 (232-311)||(14036630-14036709)
chr6 (244-360)||(12205185-12205302)
chr6 (236-344)||(20692827-20692936)
chr6 (232-324)||(12680221-12680313)
chr6 (232-324)||(14886571-14886663)
chr6 (232-324)||(18048798-18048890)
chr6 (246-318)||(21691539-21691611)
chr6 (260-362)||(9060128-9060231)
chr6 (254-360)||(14772693-14772800)
chr6 (236-323)||(33547560-33547647)
chr6 (232-317)||(3673177-3673262)
chr6 (236-361)||(6065451-6065577)
chr6 (232-361)||(16118156-16118286)
chr6 (235-325)||(22055648-22055738)
chr6 (232-360)||(9885253-9885382)
chr6 (236-324)||(1954895-1954982)
chr6 (278-361)||(5250195-5250279)
chr6 (235-320)||(5270405-5270491)
chr6 (261-354)||(12157382-12157476)
chr6 (244-324)||(10929533-10929614)
chr6 (256-318)||(11431684-11431745)
[»] chr1 (74 HSPs)
chr1 (230-363)||(4340415-4340549)
chr1 (230-361)||(41120736-41120868)
chr1 (236-362)||(28229453-28229580)
chr1 (234-360)||(45839304-45839431)
chr1 (230-362)||(46785956-46786089)
chr1 (232-363)||(15243095-15243227)
chr1 (236-364)||(19865258-19865387)
chr1 (232-360)||(22603558-22603687)
chr1 (234-361)||(6459229-6459357)
chr1 (236-363)||(46790014-46790142)
chr1 (234-360)||(9109975-9110102)
chr1 (234-360)||(12720821-12720948)
chr1 (232-362)||(23457907-23458038)
chr1 (236-360)||(8940994-8941119)
chr1 (232-360)||(12161824-12161953)
chr1 (232-336)||(41071859-41071964)
chr1 (232-360)||(52183688-52183817)
chr1 (232-363)||(38531167-38531299)
chr1 (234-361)||(46339444-46339572)
chr1 (232-353)||(9464113-9464235)
chr1 (232-353)||(22158812-22158934)
chr1 (234-362)||(6412051-6412180)
chr1 (232-360)||(20408160-20408289)
chr1 (232-360)||(29549428-29549557)
chr1 (232-360)||(50092298-50092427)
chr1 (230-344)||(9177108-9177223)
chr1 (232-361)||(50845329-50845459)
chr1 (232-360)||(17661060-17661189)
chr1 (232-324)||(32046886-32046978)
chr1 (232-362)||(29093552-29093683)
chr1 (232-361)||(14760877-14761007)
chr1 (232-361)||(41063207-41063337)
chr1 (236-324)||(41359001-41359090)
chr1 (234-360)||(41752445-41752572)
chr1 (232-344)||(9985343-9985456)
chr1 (234-319)||(12174808-12174893)
chr1 (232-344)||(13102326-13102439)
chr1 (232-360)||(18890549-18890678)
chr1 (232-324)||(16913614-16913706)
chr1 (232-362)||(17200008-17200139)
chr1 (235-360)||(19081741-19081867)
chr1 (235-360)||(19129629-19129755)
chr1 (254-359)||(25787998-25788104)
chr1 (232-344)||(9259199-9259312)
chr1 (232-327)||(7830041-7830136)
chr1 (232-362)||(51973434-51973565)
chr1 (244-361)||(7181554-7181672)
chr1 (232-361)||(13195593-13195723)
chr1 (232-361)||(18894899-18895029)
chr1 (235-320)||(13523002-13523087)
chr1 (232-354)||(20290327-20290449)
chr1 (235-318)||(20580922-20581005)
chr1 (261-362)||(27253853-27253955)
chr1 (235-324)||(26825253-26825342)
chr1 (244-324)||(12989874-12989954)
chr1 (232-324)||(22789628-22789720)
chr1 (248-362)||(46865269-46865384)
chr1 (236-324)||(9882077-9882162)
chr1 (232-288)||(12370014-12370070)
chr1 (237-360)||(48522533-48522657)
chr1 (236-319)||(13308862-13308945)
chr1 (232-289)||(14486704-14486761)
chr1 (232-289)||(39748943-39749000)
chr1 (237-318)||(45918947-45919028)
chr1 (232-316)||(25687325-25687409)
chr1 (235-288)||(11917799-11917852)
chr1 (232-321)||(16258526-16258615)
chr1 (260-344)||(30928394-30928479)
chr1 (232-320)||(6775897-6775985)
chr1 (254-304)||(12806894-12806944)
chr1 (231-320)||(6091297-6091386)
chr1 (232-324)||(17733990-17734083)
chr1 (232-284)||(30673504-30673556)
chr1 (236-324)||(49881058-49881146)
[»] chr8 (65 HSPs)
chr8 (230-361)||(24636658-24636791)
chr8 (231-361)||(19256219-19256350)
chr8 (232-361)||(3823141-3823271)
chr8 (232-363)||(30687944-30688076)
chr8 (230-344)||(5670185-5670300)
chr8 (230-360)||(11938751-11938881)
chr8 (230-360)||(25000431-25000562)
chr8 (232-361)||(19240875-19241005)
chr8 (232-361)||(19314059-19314189)
chr8 (236-361)||(23752285-23752411)
chr8 (232-360)||(8555304-8555433)
chr8 (236-360)||(32247921-32248046)
chr8 (232-360)||(43431559-43431688)
chr8 (234-360)||(27910764-27910891)
chr8 (234-360)||(27957183-27957310)
chr8 (232-361)||(21350486-21350616)
chr8 (232-360)||(4330986-4331115)
chr8 (234-353)||(18010067-18010187)
chr8 (234-360)||(24576024-24576151)
chr8 (232-361)||(4647754-4647884)
chr8 (236-361)||(13060930-13061056)
chr8 (236-361)||(19488060-19488186)
chr8 (232-361)||(40289420-40289549)
chr8 (236-360)||(8824837-8824962)
chr8 (236-360)||(25273328-25273452)
chr8 (234-361)||(27869248-27869376)
chr8 (230-361)||(30466953-30467085)
chr8 (234-353)||(33652577-33652697)
chr8 (234-360)||(17810308-17810435)
chr8 (234-360)||(22939323-22939450)
chr8 (232-360)||(24193196-24193325)
chr8 (236-344)||(31399524-31399633)
chr8 (232-324)||(6817062-6817154)
chr8 (246-360)||(16061939-16062054)
chr8 (236-361)||(33412976-33413095)
chr8 (239-360)||(25655858-25655980)
chr8 (232-361)||(32961667-32961797)
chr8 (232-360)||(17824616-17824745)
chr8 (236-324)||(19493692-19493781)
chr8 (232-324)||(17103902-17103994)
chr8 (232-354)||(9915047-9915169)
chr8 (232-322)||(5879212-5879302)
chr8 (236-324)||(26399044-26399132)
chr8 (234-360)||(29350933-29351061)
chr8 (232-361)||(9631411-9631542)
chr8 (232-360)||(29345079-29345208)
chr8 (275-361)||(42700656-42700743)
chr8 (234-342)||(6816401-6816510)
chr8 (232-324)||(37992107-37992199)
chr8 (257-324)||(8789873-8789940)
chr8 (255-361)||(10917858-10917965)
chr8 (243-360)||(21219240-21219358)
chr8 (235-320)||(31344213-31344298)
chr8 (246-318)||(3692214-3692286)
chr8 (232-320)||(18844585-18844673)
chr8 (281-360)||(25274654-25274734)
chr8 (232-320)||(17003270-17003358)
chr8 (235-279)||(25651089-25651133)
chr8 (236-324)||(41527737-41527825)
chr8 (234-285)||(24479874-24479925)
chr8 (231-324)||(6084283-6084374)
chr8 (266-362)||(35678057-35678154)
chr8 (244-288)||(15251622-15251666)
chr8 (265-324)||(2265415-2265474)
chr8 (236-353)||(14304241-14304359)
[»] chr3 (87 HSPs)
chr3 (232-363)||(19269861-19269993)
chr3 (230-360)||(48404864-48404995)
chr3 (230-360)||(21816725-21816856)
chr3 (232-361)||(13921331-13921461)
chr3 (232-360)||(27449094-27449223)
chr3 (230-360)||(29236048-29236179)
chr3 (232-360)||(5260943-5261072)
chr3 (232-362)||(1310957-1311088)
chr3 (232-370)||(8110345-8110484)
chr3 (236-364)||(13905034-13905163)
chr3 (232-360)||(19223455-19223584)
chr3 (232-359)||(11915764-11915892)
chr3 (232-324)||(19545516-19545608)
chr3 (234-361)||(25882578-25882706)
chr3 (232-346)||(28859597-28859712)
chr3 (232-361)||(9652584-9652714)
chr3 (232-360)||(11007683-11007812)
chr3 (236-360)||(26098823-26098948)
chr3 (236-360)||(43329763-43329888)
chr3 (232-363)||(18104527-18104659)
chr3 (236-324)||(23773487-23773575)
chr3 (234-360)||(8428179-8428306)
chr3 (234-344)||(18091563-18091674)
chr3 (236-344)||(1745504-1745612)
chr3 (236-360)||(3461310-3461435)
chr3 (232-344)||(11219144-11219257)
chr3 (232-360)||(18380030-18380159)
chr3 (232-344)||(29451100-29451213)
chr3 (232-360)||(29956378-29956507)
chr3 (232-360)||(30005533-30005662)
chr3 (246-353)||(8546265-8546373)
chr3 (234-344)||(17762650-17762761)
chr3 (234-344)||(19063970-19064081)
chr3 (254-363)||(26390631-26390741)
chr3 (236-325)||(21490070-21490159)
chr3 (232-324)||(17582338-17582430)
chr3 (232-324)||(19610344-19610436)
chr3 (232-354)||(1628221-1628344)
chr3 (234-360)||(10941665-10941792)
chr3 (232-361)||(11085341-11085471)
chr3 (232-353)||(18539810-18539932)
chr3 (232-360)||(7623531-7623660)
chr3 (232-363)||(10803726-10803859)
chr3 (232-344)||(29704048-29704161)
chr3 (232-360)||(31250094-31250223)
chr3 (232-324)||(16299867-16299959)
chr3 (232-324)||(29215998-29216090)
chr3 (230-360)||(47263265-47263396)
chr3 (232-346)||(49915457-49915572)
chr3 (236-327)||(50665670-50665761)
chr3 (232-353)||(4393357-4393479)
chr3 (232-360)||(26830441-26830571)
chr3 (239-324)||(6718723-6718808)
chr3 (236-324)||(5744426-5744514)
chr3 (236-324)||(5781385-5781473)
chr3 (236-324)||(6088265-6088353)
chr3 (236-324)||(15064029-15064117)
chr3 (232-324)||(28389979-28390071)
chr3 (254-360)||(17269604-17269711)
chr3 (232-360)||(10772053-10772183)
chr3 (235-344)||(21020074-21020184)
chr3 (236-344)||(11837230-11837339)
chr3 (232-325)||(23217244-23217337)
chr3 (236-324)||(46012765-46012853)
chr3 (232-319)||(27212823-27212910)
chr3 (236-361)||(5565732-5565858)
chr3 (232-360)||(8543475-8543603)
chr3 (232-324)||(30219344-30219436)
chr3 (244-319)||(31433755-31433830)
chr3 (230-281)||(35579605-35579656)
chr3 (254-360)||(37283551-37283658)
chr3 (232-324)||(21088758-21088848)
chr3 (232-344)||(26963265-26963378)
chr3 (235-324)||(46942496-46942585)
chr3 (230-360)||(15501551-15501683)
chr3 (241-324)||(13615430-13615513)
chr3 (232-360)||(36543755-36543884)
chr3 (232-362)||(20615343-20615472)
chr3 (232-288)||(27968921-27968977)
chr3 (266-360)||(20761950-20762045)
chr3 (236-311)||(23233213-23233288)
chr3 (232-318)||(20088406-20088492)
chr3 (232-318)||(27182699-27182785)
chr3 (232-360)||(36564439-36564568)
chr3 (232-324)||(15490041-15490132)
chr3 (260-288)||(27711241-27711269)
chr3 (236-324)||(50240756-50240844)
[»] scaffold0014 (1 HSPs)
scaffold0014 (230-360)||(22219-22350)
[»] chr7 (64 HSPs)
chr7 (232-361)||(1842904-1843034)
chr7 (232-360)||(22486404-22486533)
chr7 (232-360)||(31425511-31425640)
chr7 (234-360)||(21917334-21917461)
chr7 (232-360)||(6849211-6849340)
chr7 (232-360)||(18217839-18217968)
chr7 (234-361)||(15014404-15014532)
chr7 (236-361)||(3904477-3904603)
chr7 (236-360)||(3872187-3872312)
chr7 (232-324)||(10050873-10050965)
chr7 (232-324)||(45664778-45664870)
chr7 (230-336)||(21623029-21623136)
chr7 (234-360)||(47523650-47523777)
chr7 (232-360)||(23577189-23577318)
chr7 (232-344)||(23750752-23750865)
chr7 (232-360)||(24605848-24605977)
chr7 (238-360)||(23539248-23539371)
chr7 (234-360)||(27806030-27806157)
chr7 (234-360)||(28800890-28801017)
chr7 (234-367)||(7733305-7733439)
chr7 (232-361)||(9698537-9698667)
chr7 (232-361)||(11036517-11036647)
chr7 (232-361)||(20429475-20429605)
chr7 (232-344)||(20174030-20174143)
chr7 (234-360)||(23232051-23232178)
chr7 (244-361)||(2650827-2650945)
chr7 (234-362)||(42926417-42926547)
chr7 (246-362)||(48933160-48933277)
chr7 (232-324)||(36636516-36636608)
chr7 (232-354)||(32267357-32267479)
chr7 (232-361)||(37135284-37135414)
chr7 (232-361)||(39979623-39979753)
chr7 (232-360)||(23699825-23699954)
chr7 (234-360)||(15969796-15969924)
chr7 (232-363)||(38057642-38057774)
chr7 (232-361)||(40847434-40847564)
chr7 (236-324)||(26577279-26577367)
chr7 (232-344)||(1907365-1907478)
chr7 (236-360)||(2093362-2093487)
chr7 (235-320)||(31042264-31042349)
chr7 (232-324)||(816228-816320)
chr7 (232-321)||(21871582-21871667)
chr7 (244-361)||(14786634-14786752)
chr7 (236-318)||(33427704-33427786)
chr7 (236-324)||(1824237-1824325)
chr7 (232-324)||(24140460-24140552)
chr7 (232-360)||(20923958-20924087)
chr7 (236-324)||(4514779-4514867)
chr7 (232-324)||(22501604-22501696)
chr7 (232-320)||(36993830-36993918)
chr7 (246-320)||(26415448-26415522)
chr7 (247-344)||(27304895-27304993)
chr7 (254-319)||(1841824-1841889)
chr7 (232-289)||(10222701-10222758)
chr7 (232-320)||(27130344-27130430)
chr7 (232-304)||(2457680-2457752)
chr7 (232-299)||(687887-687954)
chr7 (235-324)||(11852021-11852110)
chr7 (236-324)||(1822030-1822118)
chr7 (232-316)||(25777157-25777241)
chr7 (260-319)||(15330247-15330306)
chr7 (232-324)||(11890184-11890276)
chr7 (249-281)||(5235420-5235452)
chr7 (260-359)||(27132722-27132822)
[»] scaffold0128 (1 HSPs)
scaffold0128 (230-354)||(10669-10794)
[»] chr5 (54 HSPs)
chr5 (230-360)||(26708585-26708716)
chr5 (230-360)||(26978319-26978450)
chr5 (234-362)||(618306-618435)
chr5 (236-360)||(16631874-16631999)
chr5 (232-360)||(7888807-7888936)
chr5 (232-360)||(25652583-25652712)
chr5 (236-360)||(38837671-38837796)
chr5 (236-363)||(746865-746993)
chr5 (236-361)||(10494751-10494877)
chr5 (232-361)||(28265474-28265604)
chr5 (232-360)||(12045737-12045866)
chr5 (230-361)||(24138840-24138972)
chr5 (232-361)||(17039630-17039760)
chr5 (232-318)||(23408990-23409076)
chr5 (232-360)||(8886851-8886980)
chr5 (234-362)||(16121837-16121966)
chr5 (236-359)||(17771969-17772093)
chr5 (234-361)||(35620343-35620470)
chr5 (236-362)||(40484058-40484185)
chr5 (233-366)||(17036406-17036540)
chr5 (236-360)||(4125188-4125313)
chr5 (234-362)||(12328224-12328353)
chr5 (232-344)||(23975645-23975758)
chr5 (232-360)||(36196404-36196533)
chr5 (234-360)||(2472714-2472841)
chr5 (232-360)||(5982655-5982785)
chr5 (232-361)||(20959518-20959648)
chr5 (232-360)||(20187941-20188070)
chr5 (232-324)||(33818598-33818690)
chr5 (232-353)||(15060983-15061105)
chr5 (232-360)||(8108860-8108989)
chr5 (234-354)||(17986741-17986862)
chr5 (232-360)||(36831890-36832019)
chr5 (232-361)||(7003729-7003857)
chr5 (232-324)||(23423793-23423885)
chr5 (236-327)||(36597374-36597465)
chr5 (235-320)||(11927827-11927912)
chr5 (236-324)||(25397825-25397913)
chr5 (232-324)||(33816795-33816887)
chr5 (232-360)||(13974078-13974207)
chr5 (232-344)||(27428028-27428141)
chr5 (232-344)||(36716216-36716329)
chr5 (232-363)||(13620124-13620256)
chr5 (244-323)||(17079427-17079506)
chr5 (232-324)||(25673266-25673357)
chr5 (258-325)||(33735009-33735076)
chr5 (235-344)||(10420268-10420378)
chr5 (234-324)||(23974613-23974703)
chr5 (232-301)||(32726786-32726855)
chr5 (232-320)||(3080737-3080825)
chr5 (232-284)||(22649406-22649458)
chr5 (244-324)||(26301925-26302005)
chr5 (236-354)||(35778155-35778274)
chr5 (254-288)||(31853161-31853195)
[»] scaffold0007 (4 HSPs)
scaffold0007 (232-361)||(3752-3882)
scaffold0007 (232-360)||(202784-202913)
scaffold0007 (232-289)||(276206-276263)
scaffold0007 (293-344)||(274681-274733)
[»] chr2 (51 HSPs)
chr2 (232-360)||(41736178-41736307)
chr2 (234-344)||(18551269-18551380)
chr2 (232-360)||(22140364-22140493)
chr2 (236-360)||(44476375-44476500)
chr2 (230-360)||(12779604-12779735)
chr2 (230-360)||(37552231-37552362)
chr2 (232-361)||(13788054-13788184)
chr2 (236-361)||(43408510-43408636)
chr2 (232-361)||(32008958-32009089)
chr2 (232-353)||(32300457-32300579)
chr2 (232-359)||(28319580-28319708)
chr2 (230-360)||(23857958-23858088)
chr2 (235-344)||(13613109-13613219)
chr2 (234-362)||(28841340-28841469)
chr2 (254-362)||(44722960-44723069)
chr2 (232-354)||(37723998-37724121)
chr2 (232-353)||(1141542-1141664)
chr2 (232-353)||(15636742-15636864)
chr2 (236-344)||(7093578-7093687)
chr2 (232-360)||(20065074-20065203)
chr2 (232-360)||(41637624-41637753)
chr2 (234-361)||(14757120-14757248)
chr2 (232-354)||(28262370-28262493)
chr2 (236-361)||(26243320-26243446)
chr2 (232-344)||(21293727-21293840)
chr2 (232-344)||(23388394-23388507)
chr2 (232-344)||(32185838-32185951)
chr2 (232-324)||(27327622-27327714)
chr2 (232-324)||(30783344-30783436)
chr2 (232-365)||(9004303-9004437)
chr2 (232-322)||(31266360-31266450)
chr2 (232-344)||(8430302-8430415)
chr2 (232-324)||(29749440-29749532)
chr2 (232-344)||(26687706-26687820)
chr2 (266-360)||(27039908-27040003)
chr2 (232-365)||(18609520-18609654)
chr2 (232-324)||(8763640-8763732)
chr2 (244-324)||(38362308-38362388)
chr2 (232-317)||(18916444-18916529)
chr2 (234-299)||(27523019-27523084)
chr2 (235-287)||(29998633-29998685)
chr2 (232-323)||(36373906-36373995)
chr2 (232-288)||(37802451-37802507)
chr2 (235-325)||(44366033-44366123)
chr2 (232-344)||(40018808-40018921)
chr2 (254-322)||(35697483-35697551)
chr2 (234-361)||(36550844-36550971)
chr2 (261-363)||(2556130-2556233)
chr2 (232-270)||(27058407-27058445)
chr2 (232-324)||(13134657-13134749)
chr2 (246-324)||(9590490-9590568)
[»] scaffold0576 (1 HSPs)
scaffold0576 (232-361)||(9228-9358)
[»] scaffold0603 (1 HSPs)
scaffold0603 (232-344)||(5995-6108)
[»] scaffold0240 (1 HSPs)
scaffold0240 (231-361)||(14989-15120)
[»] scaffold0002 (1 HSPs)
scaffold0002 (236-361)||(439977-440103)
[»] scaffold0599 (1 HSPs)
scaffold0599 (232-359)||(7515-7643)
[»] scaffold0219 (1 HSPs)
scaffold0219 (234-361)||(19615-19743)
[»] scaffold0076 (1 HSPs)
scaffold0076 (234-361)||(26495-26623)
[»] scaffold0009 (3 HSPs)
scaffold0009 (236-359)||(182544-182668)
scaffold0009 (234-360)||(219648-219775)
scaffold0009 (236-323)||(215701-215781)
[»] scaffold0184 (1 HSPs)
scaffold0184 (232-354)||(7466-7589)
[»] scaffold0001 (3 HSPs)
scaffold0001 (234-354)||(8116-8237)
scaffold0001 (234-354)||(21848-21969)
scaffold0001 (232-360)||(84313-84442)
[»] scaffold0006 (2 HSPs)
scaffold0006 (236-354)||(84680-84799)
scaffold0006 (235-318)||(121030-121113)
[»] scaffold0062 (1 HSPs)
scaffold0062 (232-363)||(43927-44059)
[»] scaffold0717 (1 HSPs)
scaffold0717 (234-363)||(915-1046)
[»] scaffold0069 (1 HSPs)
scaffold0069 (232-324)||(10168-10260)
[»] scaffold0108 (1 HSPs)
scaffold0108 (232-362)||(12663-12793)
[»] scaffold0058 (1 HSPs)
scaffold0058 (232-361)||(74540-74670)
[»] scaffold0047 (1 HSPs)
scaffold0047 (232-324)||(58592-58684)
[»] scaffold0161 (1 HSPs)
scaffold0161 (232-354)||(6805-6928)
[»] scaffold0023 (1 HSPs)
scaffold0023 (244-361)||(39702-39820)
[»] scaffold0019 (1 HSPs)
scaffold0019 (234-360)||(173456-173584)
[»] scaffold0087 (1 HSPs)
scaffold0087 (232-324)||(37824-37916)
[»] scaffold0655 (1 HSPs)
scaffold0655 (244-361)||(3161-3279)
[»] scaffold0035 (1 HSPs)
scaffold0035 (234-354)||(74723-74845)
[»] scaffold0011 (1 HSPs)
scaffold0011 (273-344)||(17633-17705)
[»] scaffold0502 (1 HSPs)
scaffold0502 (232-324)||(10902-10994)
[»] scaffold0284 (1 HSPs)
scaffold0284 (236-324)||(1556-1644)
[»] scaffold0024 (1 HSPs)
scaffold0024 (246-286)||(112352-112392)
[»] scaffold0554 (1 HSPs)
scaffold0554 (293-363)||(9881-9952)
[»] scaffold0114 (1 HSPs)
scaffold0114 (236-324)||(36316-36404)


Alignment Details
Target: chr4 (Bit Score: 429; Significance: 0; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 1 - 572
Target Start/End: Original strand, 25026341 - 25026906
Alignment:
Q  1 tgtgatcattcttaggagtctccttccaccaggagaaatcaaacccctttcaggtgtatatctcattgagtaccctcacaagttaatattttaattttac 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |  ||   |||||||||||||    
T  25026341 tgtgattattcttaggagtctccttccaccaggagaaattaaacccctttcaggtgtatatctcattgagtaa------atattttcattttaattttac 25026434  T
Q  101 tattacattatgtttaggtaatatattacttattaggtctaatgtactgctttctagctagtaagattagtaaagtacatacattcaccacttagttgaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25026435 tattacattatgtttaggtaatatattacttagtaggtctaatgtactgctttctagctagtaagattagtaaagtacatacattcaccacttagttgaa 25026534  T
Q  201 acactaagttattgcactactnnnnnnnnctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttg 300  Q
    |||||||||||||||||||||        ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25026535 acactaagttattgcactactaaaaaaa-ctaaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttg 25026633  T
Q  301 tgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtgttagttgttagtgttaaacttggtataattcttagtaga 399  Q
    |||| ||||||||||||||||||| |||| ||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  25026634 tgagaaatttcattttttccgtcactaatttccctcactaattttactttttctaatagtgttggttcttagtgttaaacttggtataattcttagtaga 25026733  T
Q  400 gctggaaaccttaagttttaggcattagtttttagtctttaattttatttgttgagtcctaaactcaacatttgacttagtaagtatatatagttgtagg 499  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25026734 gctggaaaccttaagttataggcattagtttttagtctttaattttatttgttgagtcctaaactcaacatttgacttagtaagtatatatagttgtacg 25026833  T
Q  500 gatcttagtttagttataggttataggtattagttgtagaccttaggtgtaactagttcttcatgtttgtgct 572  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25026834 gatcttagtttagttataggttataggtattagttgtagaccttaggtgtaactagttcttcatgtttgtgct 25026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 45532708 - 45532578
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |    
T  45532708 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 45532609  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||||||||||| | ||||||||||||||    
T  45532608 ccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 4586889 - 4586756
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  4586889 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaat 4586790  T
Q  329 ctccctcgttaattttacattttctaatagtgtt 362  Q
     ||||||| ||||||| | ||||||| |||||||    
T  4586789 ttccctcgctaattttgctttttctagtagtgtt 4586756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 32175866 - 32175736
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||| |||| |    
T  32175866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 32175767  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||||||||||| | ||||||| ||||||    
T  32175766 ccctcgttaattttgctttttctagtagtgt 32175736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 364
Target Start/End: Complemental strand, 55309342 - 55309208
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatt-ttttccgtca-taatc 329  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| ||||     
T  55309342 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatt 55309243  T
Q  330 tccctcgttaattttacattttctaatagtgttag 364  Q
    ||||||| ||||||| | ||||||| |||||||||    
T  55309242 tccctcgctaattttgctttttctagtagtgttag 55309208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 19839187 - 19839316
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| |    
T  19839187 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 19839286  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  19839287 ccctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 9670604 - 9670479
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  9670504 cgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 234 - 344
Target Start/End: Complemental strand, 2275805 - 2275694
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  2275805 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2275706  T
Q  333 ctcgttaatttt 344  Q
    |||| |||||||    
T  2275705 ctcgctaatttt 2275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 5473857 - 5473986
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||| |||| |    
T  5473857 aaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtcactaattt 5473956  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  5473957 ccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 29625337 - 29625446
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  29625437 cgctaatttt 29625446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 38645762 - 38645887
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatctccct 334  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||| |||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  38645862 cgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 12071972 - 12072100
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||  ||| |||| ||     
T  12071972 atttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatcactaatttcg 12072071  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||||||||||    
T  12072072 ctcgctaattttgctttttctaatagtgt 12072100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 13028947 - 13028815
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| ||||    
T  13028947 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaat 13028848  T
Q  329 ctccctcgttaattttacattttctaatagtgt 361  Q
     | ||||| ||| ||| | ||||||| ||||||    
T  13028847 tttcctcgctaagtttgctttttctagtagtgt 13028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 38223518 - 38223650
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||||| ||||||    
T  38223518 aaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcactaatct 38223617  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||  ||||||||||||||||| | ||||||    
T  38223618 ccctccctaattttacattttctagtggtgtta 38223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 236 - 363
Target Start/End: Original strand, 38619859 - 38619987
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||  || |||||| |||||||||||||||||||||||| |||| |||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  335 cgttaattttacattttctaatagtgtta 363  Q
    || ||||||| | ||||||| ||||||||    
T  38619959 cgctaattttgctttttctagtagtgtta 38619987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 54539292 - 54539423
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  54539292 ctaaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaat 54539391  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     | ||| | ||||||| | ||||||| |||||    
T  54539392 tttccttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 4627209 - 4627079
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||    
T  4627209 ctaaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaat 4627110  T
Q  329 ctccctcgttaattttacattttctaatagt 359  Q
     ||||||| ||||||| | ||||||| ||||    
T  4627109 ttccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 365
Target Start/End: Complemental strand, 19680553 - 19680419
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||  |    
T  19680553 aaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaatt 19680454  T
Q  331 ccctcgttaattttacattttctaatagtgttagt 365  Q
    |||||  ||||||| | ||||||| ||||||||||    
T  19680453 ccctcactaatttttctttttctagtagtgttagt 19680419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 9239406 - 9239295
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| |||||||||||||||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||| |||| |||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  335 cgttaattttac 346  Q
    ||||||||||||    
T  9239306 cgttaattttac 9239295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 13565044 - 13564914
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||| |||||||||| ||||||||| |||| |    
T  13565044 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaattt 13564945  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  13564944 ccctcgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 7112071 - 7111946
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||| |||| |||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  7111971 cgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 14944758 - 14944846
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtca 14944846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 18714908 - 18715039
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||| | ||    
T  18714908 ctaaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttat 18715007  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| |||| || | ||||||| |||||    
T  18715008 ttccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 22168278 - 22168405
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||| |||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||| |||| |||    
T  22168278 atttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcactaatttcc 22168377  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  22168378 ctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 37378752 - 37378629
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||| |    
T  37378752 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaataattt 37378653  T
Q  331 ccctcgttaattttacattttcta 354  Q
     ||||| ||||||| | |||||||    
T  37378652 tcctcgctaattttgctttttcta 37378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 9238747 - 9238641
Alignment:
Q  239 gtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgt 337  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||||     
T  9238747 gtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 9238648  T
Q  338 taatttt 344  Q
    |||||||    
T  9238647 taatttt 9238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 27040154 - 27040025
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||  |||||||||||| |||| |    
T  27040154 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcactaattt 27040055  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  27040054 ccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 30507999 - 30508124
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcata-atctccct 334  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| ||||| | || | |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  30508099 cgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 25147729 - 25147824
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcataa 327  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||    
T  25147729 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcataa 25147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 30269117 - 30268987
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||| |||||||| |||||||||||||||||||||||||||||  ||  |||||| ||||||||||||||||||||||| | || |    
T  30269117 aaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgattt 30269018  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  30269017 ccctcgctaattttgctttttctagtagtgt 30268987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 30283072 - 30283202
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||| |||||||| |||||||||||||||||||||||||||||  ||  |||||| ||||||||||||||||||||||| | || |    
T  30283072 aaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgattt 30283171  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  30283172 ccctcgctaattttgctttttctagtagtgt 30283202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 44783499 - 44783621
Alignment:
Q  241 gaaggaaaacgtaaaatccctct-ctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgtt 338  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  44783499 gaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgct 44783598  T
Q  339 aattttacattttctaatagtgt 361  Q
    | |||| | ||||||| ||||||    
T  44783599 agttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 46286358 - 46286228
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||||||||||||| ||||||||||||| |||| |    
T  46286358 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaattt 46286259  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    || ||  ||||||| | ||||||| ||||||    
T  46286258 ccgtcactaattttgctttttctagtagtgt 46286228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 36689685 - 36689798
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||  ||  ||||| |||| ||||||||||||||| ||| |||| |    
T  36689685 aaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcactaattt 36689784  T
Q  331 ccctcgttaatttt 344  Q
    ||||||||||||||    
T  36689785 ccctcgttaatttt 36689798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 5399617 - 5399709
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| || ||||||||||    
T  5399617 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtca 5399709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 22128441 - 22128349
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||  |||| |||||||||||||    
T  22128441 aaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtca 22128349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 18051847 - 18051969
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    | |||||||||| ||||||||||||||||||| |||| |    
T  18051847 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaattt 18051946  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||  ||||||| | ||||||    
T  18051947 ccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 30568128 - 30568015
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||||||||| |||||||||||||||| |||||||| |||  |  ||||||||||||||||||||||||||||||| |||| |    
T  30568128 aaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaattt 30568029  T
Q  331 ccctcgttaatttt 344  Q
    | |||| |||||||    
T  30568028 cgctcgctaatttt 30568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 42055409 - 42055534
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcata-atctccct 334  Q
    ||||||| | |||| |||||||| ||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||| | || |||||    
T  42055409 ttagtgaggaaaaatgtaaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccct 42055508  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  42055509 cgctaattttgctttttctagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 24682444 - 24682328
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||  | |||||||||||||||||| ||||||||||||| |||| ||||||  |||||    
T  24682444 ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaatt 24682345  T
Q  343 ttacattttctaatagt 359  Q
    || | ||||||| ||||    
T  24682344 tttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 22156728 - 22156649
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcat 313  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  22156728 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcat 22156649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatctccct 334  Q
    ||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||  || |||||| |||| ||||| ||||||||| || ||||| |||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||||| |||||||||||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 18744199 - 18744107
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||  ||  | | |||||||||| |||||||||||||||||||    
T  18744199 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccgtca 18744107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 9913269 - 9913395
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    ||||| || ||||||||| ||||||||||||||||| |||||||||||||||||  ||| || |||||||| |||| ||||||||||||| |||| | ||    
T  9913269 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcc 9913368  T
Q  334 tcgttaattttacattttctaatagtg 360  Q
    ||  ||||||||  ||||||| |||||    
T  9913369 tccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 45091280 - 45091338
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  45091280 ctaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 1638455 - 1638568
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||| |||| |||||||||||||||||||||||||  || |||| ||||||| |||| ||||||||||||| |||| |    
T  1638455 aaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaattt 1638554  T
Q  331 ccctcgttaatttt 344  Q
    |||||  |||||||    
T  1638555 ccctccctaatttt 1638568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 8878891 - 8878983
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||||||||| |||||||||||||||||  || |||||| ||||  |||| |||||||||||||    
T  8878891 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtca 8878983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 33914067 - 33914159
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||  ||  ||||| |||||||||| || ||||||||||    
T  33914067 aaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtca 33914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 37761971 - 37761915
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  37761971 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 37761915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 9059074 - 9058989
Alignment:
Q  239 gtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||| ||||||| | |||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||| || ||||| ||||    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtca 9058989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 4606954 - 4606827
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||||||||   ||| |||||||||   |||| ||||| ||||||| |||| |||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  335 cgttaattttacattttctaatagtgtt 362  Q
    |  ||||||||| ||| ||| |||||||    
T  4606854 ccctaattttacttttcctagtagtgtt 4606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 34557191 - 34557283
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || |||||| ||||||||  ||| ||||||||||| ||||||||| ||  ||||||||||||| | |||| |||||||||||||    
T  34557191 aaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtca 34557283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 3613017 - 3613089
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||| |||| ||||||||||| |||||||||| |||||||  ||||||||||||||| | || |||||||    
T  3613017 aaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttatttttt 3613089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 6553816 - 6553904
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||||||||||||||||  || ||||||||||||||  ||| ||||| ||||| |||| |||||||||||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtca 6553904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 29238431 - 29238523
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| | ||||| ||||||| || |||||||| ||||||||||||||  |  || |||||||||||  |||| |||||||||||||    
T  29238431 aaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtca 29238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 313617 - 313687
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||||||||  || ||||||||||||||  || |||||| ||||| |||| |||||||||||||    
T  313617 aaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtca 313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 16915377 - 16915465
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||||||| ||||||  | ||||| ||||||||||  |||||||||||||||||  ||  ||||||||||  |||| |||||||||    
T  16915377 aaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttcc 16915465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 25225107 - 25225175
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttg 300  Q
    |||||||| ||| |||| ||| ||||||||||||||||| || | ||||||||||||| || |||||||    
T  25225107 aaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttg 25225175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 360
Target Start/End: Complemental strand, 30420149 - 30420033
Alignment:
Q  245 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattt 343  Q
    |||||| | |||| ||||||||||| |||||||||||  | |||  ||| ||||||| | |||||| ||||||||||||| |||| | ||||  ||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  344 tacattttctaatagtg 360  Q
    | | ||||||| |||||    
T  30420049 tgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 39234950 - 39235039
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcat-tttttccgt 322  Q
    |||||||| |||||||||||| ||||  ||||||||||  || ||||||||||||||  ||  |||||||||| ||||| || |||||||||    
T  39234950 aaatttagagaaggaaaacgtgaaat--ctctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgt 39235039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 8e-47; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 15448393 - 15448524
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15448393 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaat 15448492  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  15448493 ttccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 25398012 - 25398135
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  25398012 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 25398111  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||| ||||||| | |||||||    
T  25398112 ccctcgctaatttttctttttcta 25398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 28364921 - 28365051
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |    
T  28364921 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 28365020  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  28365021 ccctcgctaattttgctttttctagtagtgt 28365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 9892973 - 9893102
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  9892973 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 9893072  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  9893073 ccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 15364587 - 15364457
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  15364587 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 15364488  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| | ||||||| ||||||    
T  15364487 ccctcactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 495756 - 495627
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  495756 aaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 495657  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||| | ||||||| | ||||||| |||||    
T  495656 cccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 20182155 - 20182284
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||| |    
T  20182155 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 20182254  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||||| ||||||| |||||    
T  20182255 ccctcgctaattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 22153836 - 22153707
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||| |    
T  22153836 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 22153737  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||||| ||||||| |||||    
T  22153736 ccctcgctaattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 22579478 - 22579346
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||| |||| |    
T  22579478 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaattt 22579379  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||| ||||||| | ||||||||||||||||    
T  22579378 ccctcgctaattttgctttttctaatagtgtta 22579346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 15961532 - 15961406
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    |||||||||| | ||||||| ||||||    
T  15961432 cgttaattttgctttttctagtagtgt 15961406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 2669319 - 2669448
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||| |    
T  2669319 aaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcactaattt 2669418  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||||||||||| | ||||||| |||||    
T  2669419 ccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 6598476 - 6598603
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||    
T  6598476 atttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcactaatttcc 6598575  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  6598576 ctcgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 16250931 - 16250792
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||| ||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||| |||| |    
T  16250931 aaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 16250832  T
Q  331 ccctcgttaattttacattttctaatagtgttagttgtta 370  Q
    |||||||||||||| | ||||||| ||||| || ||||||    
T  16250831 ccctcgttaattttgctttttctagtagtgataattgtta 16250792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 21990303 - 21990174
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||| |||||||||| |||| |    
T  21990303 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccgtcattaattt 21990205  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  21990204 ccctcgctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 24661136 - 24661008
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  24661136 atttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24661037  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||| ||||||    
T  24661036 ctcgctaattttgctttttctagtagtgt 24661008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 33250835 - 33250707
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    ||||||||||||   ||||||| ||||||    
T  33250735 ctcgttaattttgtcttttctagtagtgt 33250707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 21140949 - 21141072
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||| ||||||||||||||||||||||| |||| |    
T  21140949 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcactaattt 21141048  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||||||||||| | |||||||    
T  21141049 ccctcgttaattttgctttttcta 21141072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 26224440 - 26224567
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||| |||| |||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 26224539  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  26224540 ctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 28668114 - 28668240
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||  ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| | || |||||    
T  28668114 ttagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccct 28668213  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||||| ||||||| ||||||    
T  28668214 cgctaattttactttttctagtagtgt 28668240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 6605621 - 6605496
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  6605521 cgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 12351715 - 12351586
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| ||||  |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |    
T  12351715 aaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcactaattt 12351616  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    ||||| |||||| ||| ||||||| |||||    
T  12351615 ccctccttaattatactttttctagtagtg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 11049878 - 11049750
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    || | |||||||   ||||||| ||||||    
T  11049778 cttgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 12160973 - 12160846
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||| ||||| |||| |||    
T  12160973 atttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttcc 12160875  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||||| ||||||| ||||||    
T  12160874 ctcgctaattttactttttctagtagtgt 12160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 236 - 354
Target Start/End: Complemental strand, 5192314 - 5192195
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||| ||| |||| | |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  335 cgttaattttacattttcta 354  Q
    || ||||||| | |||||||    
T  5192214 cgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 26939599 - 26939726
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||  |||| |||| |||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||  ||||||||| ||||||| |||||    
T  26939699 ctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 27705432 - 27705522
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt 322  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  27705432 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgt 27705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 2992627 - 2992736
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||| |||| |||    
T  2992627 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcactaatttcc 2992726  T
Q  333 ctcgttaatt 342  Q
    |||| |||||    
T  2992727 ctcgctaatt 2992736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 6978300 - 6978417
Alignment:
Q  245 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattt 343  Q
    |||||| | |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |||| ||||||| ||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  344 tacattttctaatagtgt 361  Q
    | | ||| ||||||||||    
T  6978400 tgcttttcctaatagtgt 6978417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 12499230 - 12499339
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| || | |||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  12499330 cgctaatttt 12499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 12506559 - 12506668
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| || | |||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  12506659 cgctaatttt 12506668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 12509671 - 12509562
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| || | |||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  12509571 cgctaatttt 12509562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 30834089 - 30833960
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||||||| |||| |    
T  30834089 aaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaattt 30833990  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  30833989 ccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 244 - 359
Target Start/End: Original strand, 5360431 - 5360547
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  ||  |||||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  343 ttacattttctaatagt 359  Q
    || | ||||||| ||||    
T  5360531 ttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 234 - 359
Target Start/End: Complemental strand, 27796961 - 27796835
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||||| || ||||||||| |||| ||| ||||||||| ||||| |||| |||    
T  27796961 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtcactaatttcc 27796862  T
Q  333 ctcgttaattttacattttctaatagt 359  Q
    |||| ||||||| | ||||||| ||||    
T  27796861 ctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 234 - 354
Target Start/End: Original strand, 12200706 - 12200827
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||  | |||||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| |||    
T  12200706 atttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 12200805  T
Q  333 ctcgttaattttacattttcta 354  Q
    |||  ||||||| | |||||||    
T  12200806 ctcactaattttgctttttcta 12200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 22083848 - 22083940
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| || ||||||||||    
T  22083848 aaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 22083940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 363
Target Start/End: Complemental strand, 1939358 - 1939239
Alignment:
Q  245 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattt 343  Q
    |||||| | |||||||||||||||||||||| ||||||||||||  ||  ||||||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  344 tacattttctaatagtgtta 363  Q
    | | ||||||| ||||||||    
T  1939258 tgctttttctagtagtgtta 1939239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 17919565 - 17919639
Alignment:
Q  251 gtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||    
T  17919565 gtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcat 17919639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 343692 - 343600
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||  |||||||||||||||||||||||| |||||    
T  343692 aaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtca 343600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 11077663 - 11077751
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 11077751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 12845013 - 12845105
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||  || ||||||||||| ||||| |||||||||||||    
T  12845013 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtca 12845105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 12951718 - 12951810
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||| || ||||||||||    
T  12951718 aaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtca 12951810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 15509188 - 15509288
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    ||||||||||||||||||||||||||||||| |||  | | |||||||||||||||||||||||||||||| |||| ||||||| ||||||| | |||||    
T  15509188 aaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttc 15509287  T
Q  353 t 353  Q
    |    
T  15509288 t 15509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 18492391 - 18492471
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||    
T  18492391 ggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtca 18492471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 19175902 - 19175823
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattt 315  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  19175902 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 11530235 - 11530365
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||| |||||||||||||||||||||||| |||||||| ||||| |||| ||||| || ||||||||||  ||| |    
T  11530235 aaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcacaaattt 11530334  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| | ||| ||||||||||    
T  11530335 ccctccctaattttgcttttcctaatagtgt 11530365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 18033654 - 18033576
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaattt 310  Q
    ||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18033654 aaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt 18033576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 359
Target Start/End: Original strand, 10458778 - 10458902
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| | |||| |||||||  |||| ||||||| |||||||||||||| |  ||||||||||||||||| |||||||||||||||| |||| |||||    
T  10458778 ttagtgaggaaaaatgtaaaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccct 10458877  T
Q  335 cgttaattttacattttctaatagt 359  Q
    |  ||||||||| ||||||| ||||    
T  10458878 cactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 14872133 - 14872221
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||  |  |||||||||||||||||||| || ||||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtca 14872221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 23281796 - 23281884
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  |   |||||||||||||||| |||||||||    
T  23281796 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttcc 23281884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 11350196 - 11350263
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtga 303  Q
    ||||||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtga 11350263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 14036630 - 14036709
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttc 311  Q
    |||||| |||| ||||||||| ||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||    
T  14036630 aaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaatttc 14036709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 12205302 - 12205185
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||| ||||| || |||||||||| |||| || ||   |||||    
T  12205302 ggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaatt 12205203  T
Q  343 ttacattttctaatagtg 360  Q
    |||| |||||||| ||||    
T  12205202 ttactttttctaagagtg 12205185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 20692936 - 20692827
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||  || || | | |||||| ||||||||||||| |||| | |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  335 cgttaatttt 344  Q
    ||||||||||    
T  20692836 cgttaatttt 20692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 12680313 - 12680221
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||||| |||| ||||||||||||||||| |||||||| |||| || ||||| ||||| ||||| |||||||||||||    
T  12680313 aaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtca 12680221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 14886571 - 14886663
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||  || |||| ||||||| |||| |||||||| ||||    
T  14886571 aaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtca 14886663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 18048798 - 18048890
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||  || ||||||||||| ||||| |||||||||||||    
T  18048798 aaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtca 18048890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 21691611 - 21691539
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||| |||||||||||||||| ||||||||||||||||||  || ||||||||||| ||||| |||||||    
T  21691611 aaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttt 21691539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 9060128 - 9060231
Alignment:
Q  260 ctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatag 358  Q
    ||||||||||| |||||||||||||||||  ||  ||||||||||| |||| ||||||||||||| |||| || ||| |||||||| | |||||| ||||    
T  9060128 ctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaatttcgctctttaattttgctttttcttatag 9060227  T
Q  359 tgtt 362  Q
    ||||    
T  9060228 tgtt 9060231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 14772693 - 14772800
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||||||||||||||| || |||| |||||  ||| || |||  ||||||| | |||||    
T  14772693 aaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttttc 14772792  T
Q  353 taatagtg 360  Q
    ||||||||    
T  14772793 taatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 33547560 - 33547647
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc 323  Q
    ||||||| ||||||| | |||||||| |||||||  |||||||||||||||||  || |||||||||||| |||| ||||||||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtc 33547647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 3673262 - 3673177
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttt 317  Q
    ||||||||||| | |||| |||||||   |||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||    
T  3673262 aaatttagtgaggaaaaatgtaaaatttttctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcattttt 3673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 6065451 - 6065577
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||   |||| |||||||||||  |||| ||||||||||||| || |||||||||||  |||| ||||||||||||| |||| | |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    |  ||||||| | ||| ||||||||||    
T  6065551 ccctaattttgcttttcctaatagtgt 6065577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 16118156 - 16118286
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||| ||| ||| ||| | ||||| |||||||||| ||||| |||||||||||||  |||||||||| ||  |||| | ||||||||||| |||| |    
T  16118156 aaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaattt 16118255  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    || ||  ||||||||| ||| ||||||||||    
T  16118256 ccgtccctaattttacctttcctaatagtgt 16118286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 22055738 - 22055648
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    |||||||| | ||||| | |||||||||||||||||| ||| | ||||||| ||  || ||||||||||||||||| |||||||| |||||    
T  22055738 tttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 22055648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 9885253 - 9885382
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||| |||||  ||||||||||||||| |  ||  ||||||||||  |||| ||||||||||||| |||| |    
T  9885253 aaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaattt 9885352  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  | ||||| | ||||||| |||||    
T  9885353 ccctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 1954895 - 1954982
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||||||| | |||||| ||| ||||||| |||| |||||||| ||  ||| ||||||||| |||||| |||||||||||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtca 1954982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 5250195 - 5250279
Alignment:
Q  278 aaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtgt 361  Q
    |||||||||||  ||| ||||| |||||||||||||||||||||||| |||| ||||||| | ||||| | ||||||| ||||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtgt 5250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 5270405 - 5270491
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgat-taaggaatttgtgaggaatttcattttttcc 320  Q
    ||||| || |||||| || |||| |||||||||||||||||||||||||| ||||  ||  |||||||||| ||||| |||||||||    
T  5270405 tttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttcc 5270491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 12157476 - 12157382
Alignment:
Q  261 tctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttcta 354  Q
    ||||||||||||||||||||||||  ||  || || ||||| ||| |||| ||||||||||||| |||| |||||| |||||||| | |||||||    
T  12157476 tctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttttcta 12157382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 10929614 - 10929533
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtga-ggaatttcattttttccgtca 324  Q
    ||||||| | ||||| |||| | ||||||||| ||||||||||||  ||||||||||||| || |||| |||||||||||||    
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtca 10929533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 11431745 - 11431684
Alignment:
Q  256 atccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    |||||||| |||||||||||||||||||||| | ||| |||||||||||  |||| |||||||    
T  11431745 atccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttatttttt 11431684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 230 - 363
Target Start/End: Original strand, 4340415 - 4340549
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  4340415 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaat 4340514  T
Q  329 ctccctcgttaattttacattttctaatagtgtta 363  Q
     ||||| | ||||||| | ||||||||||||||||    
T  4340515 ttcccttgctaattttgctttttctaatagtgtta 4340549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 41120868 - 41120736
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| ||| ||||    
T  41120868 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaat 41120769  T
Q  329 ctccctcgttaattttacattttctaatagtgt 361  Q
     ||||||| ||||||| | ||||||| ||||||    
T  41120768 ttccctcgctaattttgctttttctattagtgt 41120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 28229580 - 28229453
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  335 cgttaattttacattttctaatagtgtt 362  Q
    || ||||||| | ||||||| |||||||    
T  28229480 cgctaattttgctttttctagtagtgtt 28229453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 45839304 - 45839431
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  45839304 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 45839403  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||||||||||| | ||||||| |||||    
T  45839404 ctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 46786089 - 46785956
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||||| ||||    
T  46786089 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaat 46785990  T
Q  329 ctccctcgttaattttacattttctaatagtgtt 362  Q
     ||||||| ||||||| | |||||||||| ||||    
T  46785989 ttccctcgctaattttgctttttctaatattgtt 46785956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 15243095 - 15243227
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |    
T  15243095 aaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 15243194  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    | |||| | ||||| | ||||||| ||||||||    
T  15243195 ctctcgctgatttttctttttctagtagtgtta 15243227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 364
Target Start/End: Original strand, 19865258 - 19865387
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| | |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  335 cgttaattttacattttctaatagtgttag 364  Q
    || ||||||||| ||||||| |||||||||    
T  19865358 cgctaattttactttttctagtagtgttag 19865387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 22603558 - 22603687
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||| |    
T  22603558 aaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcactaattt 22603657  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||| | ||||||| | ||||||| |||||    
T  22603658 cccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 6459229 - 6459357
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  6459229 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 6459328  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||  | ||||||| ||||||    
T  6459329 ctcgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 236 - 363
Target Start/End: Original strand, 46790014 - 46790142
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| |||| |||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  335 cgttaattttacattttctaatagtgtta 363  Q
    || ||||||| | ||||||| ||||||||    
T  46790114 cgctaattttgctttttctagtagtgtta 46790142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 9110102 - 9109975
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||    
T  9110102 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 9110003  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  9110002 ctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 12720821 - 12720948
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| |||| |||    
T  12720821 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 12720920  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  12720921 ctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 23457907 - 23458038
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||| ||||| |    
T  23457907 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattt 23458006  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
     ||||| ||||||||| ||||||| |||||||    
T  23458007 tcctcgctaattttactttttctagtagtgtt 23458038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 8941119 - 8940994
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||| |||| |||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  8941019 cgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 12161824 - 12161953
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||| ||||| |    
T  12161824 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattt 12161923  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||| ||||||||| ||||||| |||||    
T  12161924 tcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 41071964 - 41071859
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||| |||| |    
T  41071964 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtcactaattt 41071865  T
Q  331 ccctcg 336  Q
    ||||||    
T  41071864 ccctcg 41071859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 52183688 - 52183817
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||||||||||||| ||||||||||||| |||| |    
T  52183688 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcattaattt 52183787  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||||||||||| | ||||||| |||||    
T  52183788 ccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 38531299 - 38531167
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| | || |    
T  38531299 aaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcacttattt 38531200  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||  ||||||||| ||||||| ||||||||    
T  38531199 ccctccctaattttactttttctagtagtgtta 38531167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 46339572 - 46339444
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||| | ||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |    
T  46339572 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 46339473  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||| ||||||    
T  46339472 ctcgctaattttgctttttctagtagtgt 46339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 9464113 - 9464235
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  9464113 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 9464212  T
Q  331 ccctcgttaattttacattttct 353  Q
    || ||  ||||||||| ||||||    
T  9464213 ccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 22158812 - 22158934
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||| |||| |||| |    
T  22158812 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcactaattt 22158911  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||| ||||||||| ||||||    
T  22158912 ccctcgctaattttactttttct 22158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 6412180 - 6412051
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| | |||| |||    
T  6412180 atttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttcc 6412081  T
Q  333 ctcgttaattttacattttctaatagtgtt 362  Q
    |||| ||||||| | ||||||| |||||||    
T  6412080 ctcgctaattttgctttttctagtagtgtt 6412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 20408289 - 20408160
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  20408289 aaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 20408190  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||| ||||||| | ||||||| |||||    
T  20408189 tcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 29549428 - 29549557
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||  |||||||||| ||||| ||||||| ||||| |||| |    
T  29549428 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcactaattt 29549527  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  29549528 ccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 50092427 - 50092298
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||| | |||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||| |||| |    
T  50092427 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 50092328  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  50092327 ccctcgctaatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 9177108 - 9177223
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||| | ||||    
T  9177108 ctaaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaat 9177207  T
Q  329 ctccctcgttaatttt 344  Q
     ||||||| |||||||    
T  9177208 ttccctcgctaatttt 9177223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 50845459 - 50845329
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||  ||| |    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 50845360  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| | ||||||| ||||||    
T  50845359 ccctccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 17661060 - 17661189
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||| ||||||||||||| ||||||||||||||||  | | |||||||||||||||| ||||||||||||| |||| |    
T  17661060 aaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaattt 17661159  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    || ||||||||||| | |||||||||||||    
T  17661160 ccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 32046886 - 32046978
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  32046886 aaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtca 32046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 29093683 - 29093552
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt-cataatct 330  Q
    |||||||| || |||||| ||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| || | || | |    
T  29093683 aaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtccttagttt 29093584  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
    ||||| |||||||||| ||||||| |||||||    
T  29093583 ccctccttaattttactttttctagtagtgtt 29093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 14760877 - 14761007
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||  || ||||||||||||||||| || ||||||||||  ||| |    
T  14760877 aaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaattt 14760976  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    ||||| |||||||| | ||||||| ||||||    
T  14760977 ccctctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 41063207 - 41063337
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| || |||| ||||||| |||| ||||||||||||| |||| |    
T  41063207 aaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcactaattt 41063306  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     |||  |||||||||| ||||||| ||||||    
T  41063307 tccttcttaattttactttttctagtagtgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 41359001 - 41359090
Alignment:
Q  236 ttagtgaaggaaaacgtaaaa-tccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtca 41359090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 41752445 - 41752572
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||  ||||| ||||||||||||| |||| |||    
T  41752445 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtcactaatttcc 41752544  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
     ||  ||||||| | ||||||| |||||    
T  41752545 gtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 9985456 - 9985343
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| | |||||||||||||||||||||||||||||| |||||||| |||  || ||||||||||||||||| ||||||||||||| |||| |    
T  9985456 aaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcactaattt 9985357  T
Q  331 ccctcgttaatttt 344  Q
    |||| | |||||||    
T  9985356 cccttgctaatttt 9985343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 12174893 - 12174808
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    ||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  12174893 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttc 12174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 13102326 - 13102439
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||  ||||||||||||| |||||| || ||||||||||  ||| |    
T  13102326 aaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtcacaaattt 13102425  T
Q  331 ccctcgttaatttt 344  Q
    ||||| ||||||||    
T  13102426 ccctccttaatttt 13102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 18890678 - 18890549
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| ||||  |||||||| |||||||||||||||||||| ||||||||||||||  |   |||||||||||||||||||||||||| ||| |||| |    
T  18890678 aaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatcactaattt 18890579  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | |||||| ||||||    
T  18890578 ccctcgctaattttgctttttctgatagtg 18890549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 16913706 - 16913614
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||| | |||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  16913706 aaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtca 16913614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 17200139 - 17200008
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | ||||  |||||| | ||| ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| | || |    
T  17200139 aaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactgattt 17200040  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
    |||||| |||||||   ||||||| |||||||    
T  17200039 ccctcgctaattttgttttttctagtagtgtt 17200008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 19081741 - 19081867
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    ||||| || ||||||||| ||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||| ||||||||| ||| |||| ||||    
T  19081741 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccc 19081840  T
Q  334 tcgttaattttacattttctaatagtg 360  Q
    ||  ||||||||| |||| || |||||    
T  19081841 tctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 19129629 - 19129755
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    ||||| || ||||||||| ||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||| ||||||||| ||| |||| ||||    
T  19129629 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccc 19129728  T
Q  334 tcgttaattttacattttctaatagtg 360  Q
    ||  ||||||||| |||| || |||||    
T  19129729 tctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 25788104 - 25787998
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||||||  |||||||||||| |||| | ||||| ||||||| | |||||    
T  25788104 aaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttttc 25788005  T
Q  353 taatagt 359  Q
    || ||||    
T  25788004 tagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 9259312 - 9259199
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||  | | |||||||||| |||||  |||||||||||| |||| |    
T  9259312 aaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcactaattt 9259213  T
Q  331 ccctcgttaatttt 344  Q
     |||||||||||||    
T  9259212 tcctcgttaatttt 9259199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 7830041 - 7830136
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcataa 327  Q
    ||||||||||| ||||||| | ||||||||| |||||| ||||||||||||||||||  |||||||||||||| ||||| || |||||| ||||||    
T  7830041 aaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatcataa 7830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 51973434 - 51973565
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || ||||  |||||||||||||||||||||||||||||  |  || ||| |||||||||||||||||||||| | |||| |    
T  51973434 aaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttactaattt 51973533  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
    |||||| ||||||| | ||||||| |||||||    
T  51973534 ccctcgctaattttgctttttctagtagtgtt 51973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 7181672 - 7181554
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||  | | ||| ||||||||||||  |||||||||||| |||| ||||| | |||||    
T  7181672 ggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcactaatttcccttgctaatt 7181573  T
Q  343 ttacattttctaatagtgt 361  Q
    || | ||||||| ||||||    
T  7181572 ttgctttttctagtagtgt 7181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 13195593 - 13195723
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||| | |||||||||||||||||| ||||||||||||||||    ||||||| ||||||||||| |  |||||| ||| ||||||    
T  13195593 aaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcactaatct 13195692  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| ||||||||| ||||||    
T  13195693 ccctccctaattttgcattttctagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 18895029 - 18894899
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||  || |||| ||||||| |||| ||||||| ||||| |||| |    
T  18895029 aaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtcactaattt 18894930  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||| ||||||| | ||| ||| ||||||    
T  18894929 tcctcgctaattttgcttttcctagtagtgt 18894899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 13523087 - 13523002
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||| ||||  |||||||||    
T  13523087 tttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttcc 13523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 20290449 - 20290327
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| ||||  |||||||| |||||  |||||||||||||||||||||||| ||   | | |||||||||||||||||| ||||||||||| |||| |    
T  20290449 aaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttca-tttttccgtcactaattt 20290351  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||| ||||||||| |||||||    
T  20290350 ccctcgctaattttactttttcta 20290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 20580922 - 20581005
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||| || ||||||||| |||||||||||||||| ||| | |||||||||||| ||||||||||||||| ||||| |||||||    
T  20580922 tttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttt 20581005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 27253955 - 27253853
Alignment:
Q  261 tctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagt 359  Q
    ||||||||||||||||||||||||||||  | |||||||||||| ||||| ||||||||||||| |||| | ||||  ||||||| | ||||||| ||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  360 gtt 362  Q
    |||    
T  27253855 gtt 27253853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 26825253 - 26825342
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||| || ||||||||| |||| |||||||||||||||||||||||||| |||| || |||||||||||| |  | |||||||||||||    
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtca 26825342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 12989874 - 12989954
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||| ||||| ||| ||||||| ||||||||| |||||||  |||||||||||||| ||||| |||||||||||||    
T  12989874 ggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtca 12989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 22789720 - 22789628
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||||| ||||| || |||||||| |||||||||||||||||  | |||||||||||| ||||| || ||||||||||    
T  22789720 aaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtca 22789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 362
Target Start/End: Original strand, 46865269 - 46865384
Alignment:
Q  248 aacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttac 346  Q
    ||||| |||||||||||||||||| | |||||||||||||   ||| ||||||||||| |||| ||||||||||||| |||| ||||||  || |||| |    
T  46865269 aacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaatttccctccctagtttttc 46865368  T
Q  347 attttctaatagtgtt 362  Q
     ||||||| |||||||    
T  46865369 tttttctagtagtgtt 46865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 9882162 - 9882077
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| | ||||| | |||| |||||||||||||||||||||||||||||   ||| ||||||||||| |||| |||||||||||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtca 9882077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 12370070 - 12370014
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||    
T  12370070 aaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcga 12370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 360
Target Start/End: Original strand, 48522533 - 48522657
Alignment:
Q  237 tagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctc 335  Q
    |||||| ||||||| | |||| |||||  |||||||||||||||||||||||  ||  |||||||||| ||||| |||||||| |||| |||| | ||||    
T  48522533 tagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctc 48522632  T
Q  336 gttaattttacattttctaatagtg 360  Q
    | ||||||| | ||||||| |||||    
T  48522633 gctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 13308945 - 13308862
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    ||||||| | ||||| | |||||||||||||||| | ||||||||||||||||  ||  |||||||||||||||| ||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttc 13308862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 14486761 - 14486704
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgat 289  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||| |||||||||||    
T  14486761 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgat 14486704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 39748943 - 39749000
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgat 289  Q
    ||||||||||||||||||| | ||||||| ||| |||| |||||||||||||||||||    
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgat 39749000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 45919028 - 45918947
Alignment:
Q  237 tagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    |||||| ||| ||| | ||||||||||||||||| || |||||||||||| |  ||||||||| ||||| ||||||||||||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttt 45918947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 25687409 - 25687325
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttt 316  Q
    |||||||| |||||||||| | | |||||||||||||||| |||||||||||||| |  |   |||| |||||||||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgccaaaagaaaattggtgaggaatttcatttt 25687325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 11917799 - 11917852
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||| || ||||||||| || ||||| ||||||||||||||||||||||||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcga 11917852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 16258615 - 16258526
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccg 321  Q
    |||||||| || | ||||||| ||| |||||| |||||||||||||||||||||| |  ||||||| ||||||  |||| ||| ||||||    
T  16258615 aaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccg 16258526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 30928479 - 30928394
Alignment:
Q  260 ctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    |||||||||||  ||||||||||||||||  ||||||||||| ||  |||| ||||||||||||| |||| ||||||  |||||||    
T  30928479 ctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaatttt 30928394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 6775897 - 6775985
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    |||||||||||   ||||| |||||| |||||||||||||||  |||| |||||| |  || |||||||||||| |||| |||||||||    
T  6775897 aaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttcc 6775985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 12806944 - 12806894
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgag 304  Q
    |||||||||| |||||||||||||||||||| |||  ||| ||||||||||    
T  12806944 aaatccctctataattccgtcactaaattttacgaccaagaaatttgtgag 12806894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 6091386 - 6091297
Alignment:
Q  231 taaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||||| || |||||||||||||| ||| |||||||| |||||  |||||||||   || ||||| | ||| |||||| ||||||||    
T  6091386 taaatttagagatggaaaacgtaaaattcctatctaattctgtcacagaattttgcggcaaaagaattagagagaaatttcgttttttcc 6091297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 17734083 - 17733990
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaa-ttttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||| ||| |||||||| ||| |||| ||||||||  ||| ||||||||||  |||| || ||||||||||    
T  17734083 aaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgtca 17733990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 30673504 - 30673556
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaatttt 284  Q
    ||||||||||| ||||||| | |||||||||||||||||  | ||||||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaatttt 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 49881058 - 49881146
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||||||||||||||| | || ||||||||||| ||  ||||||||| |||   |||| |||||||||||||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtca 49881146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 24636658 - 24636791
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  24636658 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaat 24636757  T
Q  329 ctccctcgttaattttac-attttctaatagtgt 361  Q
     ||||||||||||||| | |||||||| ||||||    
T  24636758 ttccctcgttaattttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 19256219 - 19256350
Alignment:
Q  231 taaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatc 329  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||| ||||     
T  19256219 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatt 19256318  T
Q  330 tccctcgttaattttacattttctaatagtgt 361  Q
    ||||||||||||||| | ||||||| ||||||    
T  19256319 tccctcgttaattttgctttttctagtagtgt 19256350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 3823141 - 3823271
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||| |||| |    
T  3823141 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtcactaattt 3823240  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||||||||||    
T  3823241 ccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 30687944 - 30688076
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||| | || |    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||| ||||||| | ||||||| ||||||||    
T  30688044 ccctcgctaattttgctttttctagtagtgtta 30688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 344
Target Start/End: Complemental strand, 5670300 - 5670185
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||||    
T  5670300 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaat 5670201  T
Q  329 ctccctcgttaatttt 344  Q
     ||||||||| |||||    
T  5670200 ttccctcgttgatttt 5670185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 11938751 - 11938881
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||    
T  11938751 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-tttttccgtcactaat 11938849  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  11938850 ttccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 25000562 - 25000431
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  25000562 ctaaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaat 25000463  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||  ||||||||| ||||||| |||||    
T  25000462 ttccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 19240875 - 19241005
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  19240875 aaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19240974  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  19240975 ccctcgctaattttgctttttctagtagtgt 19241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 19314059 - 19314189
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  19314059 aaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19314158  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  19314159 ccctcgctaattttgctttttctagtagtgt 19314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 23752411 - 23752285
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||| | ||||||||||||||    
T  23752311 cgctaattttgctttttctaatagtgt 23752285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 8555433 - 8555304
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |    
T  8555433 aaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 8555334  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  8555333 ccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 32247921 - 32248046
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||| |||| |||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    |||||||||| | ||||||| |||||    
T  32248021 cgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 43431688 - 43431559
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||| |    
T  43431688 aaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 43431589  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  43431588 ccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 27910891 - 27910764
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |||    
T  27910891 atttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttcc 27910792  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  27910791 ctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 27957310 - 27957183
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |||    
T  27957310 atttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttcc 27957211  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  27957210 ctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 21350486 - 21350616
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  21350486 aaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21350585  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||| | | ||||| | ||||||| ||||||    
T  21350586 cccttgcttattttgctttttctagtagtgt 21350616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 4330986 - 4331115
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  4330986 aaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 4331085  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  4331086 ccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 353
Target Start/End: Complemental strand, 18010187 - 18010067
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||     
T  18010187 atttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttct 18010088  T
Q  333 ctcgttaattttacattttct 353  Q
    |||| ||||||| | ||||||    
T  18010087 ctcgctaattttgctttttct 18010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 24576151 - 24576024
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    |||||| || ||||||| | ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  24576151 atttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24576052  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  24576051 ctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 4647884 - 4647754
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||| |    
T  4647884 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaattt 4647785  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| |||||||   ||||||| ||||||    
T  4647784 ccctcgctaattttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 13061056 - 13060930
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||| | ||| ||| ||||||    
T  13060956 cgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 19488186 - 19488060
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||  | |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||| | ||||||| ||||||    
T  19488086 cgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 40289549 - 40289420
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| || |||||||||||||||| |||| |    
T  40289549 aaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtcactaattt 40289451  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||| ||||||||  ||||||| ||||||    
T  40289450 tcctcgctaattttaatttttctagtagtgt 40289420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 8824837 - 8824962
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||| |||| |||||    
T  8824837 ttagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccct 8824936  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  8824937 cgctaattttgctttttctagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 25273452 - 25273328
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||  || ||||||||||||| ||||||||||| ||||| |||| |||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcatttttt-cgtcactaatttccct 25273354  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    |||||||||| | ||||||| |||||    
T  25273353 cgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 27869248 - 27869376
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||| |||| |||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||| ||||||    
T  27869348 ctcgctaattttgctttttctagtagtgt 27869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 30467085 - 30466953
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||  ||| ||||| |||||||||| | ||||||||||| ||||    
T  30467085 ctaaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaat 30466986  T
Q  329 ctccctcgttaattttacattttctaatagtgt 361  Q
     ||||||| ||||||| | ||||||| ||||||    
T  30466985 ttccctcgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 234 - 353
Target Start/End: Original strand, 33652577 - 33652697
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  33652577 atttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33652676  T
Q  333 ctcgttaattttacattttct 353  Q
    |||| ||||||| | ||||||    
T  33652677 ctcgctaattttgctttttct 33652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 17810308 - 17810435
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| | |    
T  17810308 atttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattttc 17810407  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  17810408 ctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 22939323 - 22939450
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
     ||  ||||||| | ||||||| |||||    
T  22939423 ttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 24193325 - 24193196
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||| | ||||| |||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  24193325 aaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 24193226  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  24193225 ccctcgctaattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 31399633 - 31399524
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| | ||| |||| |||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  335 cgttaatttt 344  Q
    ||||||||||    
T  31399533 cgttaatttt 31399524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 6817062 - 6817154
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||    
T  6817062 aaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtca 6817154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 16062054 - 16061939
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    ||||||| ||||| ||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  16062054 aaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 16061955  T
Q  345 acattttctaatagtg 360  Q
    || ||||||| |||||    
T  16061954 actttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 33413095 - 33412976
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||| | |||| |||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc------ggaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||| | ||||||| ||||||    
T  33413001 cgctaatttt-ctttttctagtagtgt 33412976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 25655980 - 25655858
Alignment:
Q  239 gtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgt 337  Q
    |||| ||||||||| |||||||||||||||||  ||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| ||||||      
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  338 taattttacattttctaatagtg 360  Q
    ||||||| | ||||||| |||||    
T  25655880 taattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 32961667 - 32961797
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||| |||| | || |    
T  32961667 aaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtcactgattt 32961766  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | |||| || ||||||    
T  32961767 ccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 17824745 - 17824616
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||||||| || ||||||||||  ||| |    
T  17824745 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaattt 17824646  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  17824645 ccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 19493781 - 19493692
Alignment:
Q  236 ttagtgaaggaaaacgtaaaa-tccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtca 19493692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 17103994 - 17103902
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||||||| || ||||||||||    
T  17103994 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtca 17103902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 9915169 - 9915047
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||| | |||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  9915169 aaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcga-catggaatttgtgaggaatttcattttttccgtcactaattt 9915071  T
Q  331 ccctcgttaattttacattttcta 354  Q
    | |||| ||||||| | |||||||    
T  9915070 ctctcgctaattttgctttttcta 9915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 5879212 - 5879302
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt 322  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||||||| |||  ||| |||||||||||||||| |||||||||||    
T  5879212 aaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 26399132 - 26399044
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||  |||| |||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtca 26399044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 29350933 - 29351061
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc-cgtca-taatctc 331  Q
    ||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||  | | |||||||||||||||||||||||||  |||| |||| ||    
T  29350933 atttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagtcactaatttc 29351032  T
Q  332 cctcgttaattttacattttctaatagtg 360  Q
    ||||| ||||||| | ||||||| |||||    
T  29351033 cctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 9631411 - 9631542
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattcc-gtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatc 329  Q
    |||||| |||||||||||||| ||||  |||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||||||||| ||||     
T  9631411 aaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcactaatt 9631510  T
Q  330 tccctcgttaattttacattttctaatagtgt 361  Q
    | ||| | ||||||| | ||||||| ||||||    
T  9631511 ttccttgctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 29345079 - 29345208
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||| | |||| |||||||||   |||| ||||||||||||| |||| |    
T  29345079 aaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcactaattt 29345178  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  29345179 ccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 42700743 - 42700656
Alignment:
Q  275 actaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtgt 361  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | || | ||||| ||||||||| ||||||| ||||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtgt 42700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 6816510 - 6816401
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||||||||||||||||| ||||||||||||| |  |||||||||||||| ||||| ||||||| | ||| |||| |||    
T  6816510 atttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatcactaatttcc 6816411  T
Q  333 ctcgttaatt 342  Q
    |||| |||||    
T  6816410 ctcgctaatt 6816401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 37992107 - 37992199
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||| ||| |||| ||||| | |||| || ||||||||||    
T  37992107 aaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtca 37992199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 8789873 - 8789940
Alignment:
Q  257 tccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtca 8789940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 10917858 - 10917965
Alignment:
Q  255 aatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttct 353  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||| || ||||||||||  ||| ||||||  ||||||| | ||||||    
T  10917858 aatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttct 10917957  T
Q  354 aatagtgt 361  Q
    | ||||||    
T  10917958 agtagtgt 10917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 360
Target Start/End: Complemental strand, 21219358 - 21219240
Alignment:
Q  243 aggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaat 341  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||  ||  ||||| |||| ||||||||||||||||||| |||| || |||| | ||    
T  21219358 aggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgat 21219259  T
Q  342 tttacattttctaatagtg 360  Q
    ||| | ||||||| |||||    
T  21219258 ttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 31344298 - 31344213
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||| || |||||| || |||| ||||||||||||||||| ||||||||||||| ||| ||||| |||| ||||| |||||||||    
T  31344298 tttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttcc 31344213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 3692286 - 3692214
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    |||||||||||||| ||||||||||| | ||||||||||  || ||| ||||||||||||||||| |||||||    
T  3692286 aaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 18844673 - 18844585
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||||||||||||||| | ||||||||||||||||  || | ||||||||||||  ||  |||||||||||||||| || ||||||    
T  18844673 aaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttcc 18844585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 25274654 - 25274734
Alignment:
Q  281 ttttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtg 360  Q
    ||||||||  |||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||| | ||||||| |||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 17003270 - 17003358
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    |||||||| || ||||||||||||||  ||||||||| | |||| ||||||||| ||| ||||||||| |||||  ||| |||||||||    
T  17003270 aaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcc 17003358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 25651089 - 25651133
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaa 279  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  25651089 tttagtgaaggaaaacgtaaagtctctctctaattccgtcactaa 25651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 41527825 - 41527737
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||||| ||| ||||||  || ||||||||||||||| ||||||||| ||||| |||| |||||||||||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtca 41527737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 24479925 - 24479874
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttg 285  Q
    |||||| |||||||||||| |||| |||||||||||| ||||||||||||||    
T  24479925 atttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 6084374 - 6084283
Alignment:
Q  231 taaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||| ||  ||||| || ||||| |||||||||||||||||||||||||  ||  |||||||||| |||  |||| |||||||||||||    
T  6084374 taaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtca 6084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 35678154 - 35678057
Alignment:
Q  266 aattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtgtt 362  Q
    |||| |||||| ||||||| ||| |||||||||||||| | |||| ||||||||| ||| |||| | |||| |||||||| | ||||||||| |||||    
T  35678154 aatttcgtcaccaaattttacgaataaggaatttgtgatggattttattttttccttcattaattttcctccttaattttgctttttctaatggtgtt 35678057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 15251622 - 15251666
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||    
T  15251622 ggaaaacgtgaaatccttctctaattctgtcactaaattttgcga 15251666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 2265474 - 2265415
Alignment:
Q  265 taattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||| |||||||||||||| ||| || |||||||||| | |||| |||||||||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtca 2265415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 353
Target Start/End: Original strand, 14304241 - 14304359
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||  |||||||||| || ||| | |||||||||||  ||  | | |||||| |||| |||||||||||||| ||| |||| |||||    
T  14304241 ttagtgagggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccct 14304340  T
Q  335 cgttaattttacattttct 353  Q
    || ||||||| | ||||||    
T  14304341 cgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 5e-45; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 19269993 - 19269861
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  19269993 aaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19269894  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||| ||||||| | ||||||||||||||||    
T  19269893 ccctcgctaattttgctttttctaatagtgtta 19269861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 48404864 - 48404995
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  48404864 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaat 48404963  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  48404964 ttccctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 21816725 - 21816856
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  21816725 ctaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaat 21816824  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  21816825 ttccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 13921331 - 13921461
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||| ||||||| | ||||||| ||||||    
T  13921431 tcctcgctaattttgctttttctagtagtgt 13921461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 27449094 - 27449223
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |    
T  27449094 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 27449193  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  27449194 ccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 29236048 - 29236179
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||| ||||||||||||||||||| ||||    
T  29236048 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaat 29236147  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | |||||||||||||    
T  29236148 ttccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 5260943 - 5261072
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  5260943 aaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 5261042  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  5261043 ccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 1311088 - 1310957
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||| |    
T  1311088 aaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcactaattt 1310989  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
     ||| | ||||||| | ||||||| |||||||    
T  1310988 tccttgctaattttgctttttctagtagtgtt 1310957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 232 - 370
Target Start/End: Original strand, 8110345 - 8110484
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||||| |||| |    
T  8110345 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 8110444  T
Q  331 ccctcgttaattttacattttctaatagtgttagttgtta 370  Q
    |||||  ||||||| | ||||||| ||||||| |||||||    
T  8110445 ccctcactaattttgctttttctagtagtgtttgttgtta 8110484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 364
Target Start/End: Complemental strand, 13905163 - 13905034
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| || ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  335 cgttaattttacattttctaatagtgttag 364  Q
    |  ||||||| | ||||||| |||||||||    
T  13905063 ctctaattttgctttttctagtagtgttag 13905034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 19223455 - 19223584
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||  ||| |    
T  19223455 aaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaccaattt 19223554  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  19223555 ccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 359
Target Start/End: Original strand, 11915764 - 11915892
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||| |||||||||| |||| |    
T  11915764 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaattt 11915863  T
Q  331 ccctcgttaattttacattttctaatagt 359  Q
    |||||| ||||||| | ||||||| ||||    
T  11915864 ccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 19545516 - 19545608
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19545516 aaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtca 19545608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 25882578 - 25882706
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||||||| |||| |||    
T  25882578 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 25882677  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||||||||||    
T  25882678 ctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 28859597 - 28859712
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||| |    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  331 ccctcgttaattttac 346  Q
     ||||| |||||||||    
T  28859697 tcctcgctaattttac 28859712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 9652584 - 9652714
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||| |    
T  9652584 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaattt 9652683  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    ||||||  |||||| | ||||||| ||||||    
T  9652684 ccctcgccaattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 11007812 - 11007683
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||| |||| |    
T  11007812 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcactaattt 11007713  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    ||||   ||||||| | ||||||| |||||    
T  11007712 cccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 26098823 - 26098948
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||| |||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  26098923 cgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 43329888 - 43329763
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  43329788 cgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 18104659 - 18104527
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||| ||||| |    
T  18104659 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaataattt 18104560  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||| ||||||| | ||||||| ||||||||    
T  18104559 ccctcgctaattttgctttttctagtagtgtta 18104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 23773487 - 23773575
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtca 23773575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 8428179 - 8428306
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| |||    
T  8428179 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 8428278  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||||  ||||||| |||||    
T  8428279 ctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 344
Target Start/End: Complemental strand, 18091674 - 18091563
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| |||| |||    
T  18091674 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 18091575  T
Q  333 ctcgttaatttt 344  Q
    |||| |||||||    
T  18091574 ctcgctaatttt 18091563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 1745612 - 1745504
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||| |||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  1745513 cgctaatttt 1745504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 3461435 - 3461310
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||| |||| |||| ||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  3461335 cgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 11219144 - 11219257
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||||| |||| |    
T  11219144 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcactaattt 11219243  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  11219244 ccctcgctaatttt 11219257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 18380030 - 18380159
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||| ||| |||||| ||||||||||||| |||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||| | || |    
T  18380030 aaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcactgattt 18380129  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||||| ||||||| |||||    
T  18380130 ccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 29451100 - 29451213
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | | |||||||| |||| ||||||||||||||||||| |||| |    
T  29451100 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaattt 29451199  T
Q  331 ccctcgttaatttt 344  Q
    ||||||||||||||    
T  29451200 ccctcgttaatttt 29451213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 29956378 - 29956507
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||| |||| |    
T  29956378 aaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaattt 29956477  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||||| ||||||| |||||    
T  29956478 ccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 30005533 - 30005662
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||| |||| |    
T  30005533 aaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaattt 30005632  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||||| ||||||| |||||    
T  30005633 ccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 8546265 - 8546373
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| | ||||| |||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  345 acattttct 353  Q
     | ||||||    
T  8546365 gctttttct 8546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 344
Target Start/End: Original strand, 17762650 - 17762761
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||| |||    
T  17762650 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 17762749  T
Q  333 ctcgttaatttt 344  Q
    |||| |||||||    
T  17762750 ctcgctaatttt 17762761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 344
Target Start/End: Original strand, 19063970 - 19064081
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||| |||    
T  19063970 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19064069  T
Q  333 ctcgttaatttt 344  Q
    |||| |||||||    
T  19064070 ctcgctaatttt 19064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 26390741 - 26390631
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||| || |||| ||||||| | |||||    
T  26390741 aaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttc 26390642  T
Q  353 taatagtgtta 363  Q
    || ||||||||    
T  26390641 tagtagtgtta 26390631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 21490159 - 21490070
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcat 21490070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 17582430 - 17582338
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||    
T  17582430 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtca 17582338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 19610344 - 19610436
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  19610344 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 19610436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 1628221 - 1628344
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| |||||||||||||||| |||||||||||||| ||| |||||||||| |||||||||| ||||||||| ||| |||| |    
T  1628221 aaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcattaattt 1628320  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||  ||||||||| |||||||    
T  1628321 ccctccctaattttactttttcta 1628344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 10941792 - 10941665
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||| ||| ||||||| | |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  10941792 atttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 10941693  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    ||   ||||||| | ||||||| |||||    
T  10941692 cttactaattttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 11085471 - 11085341
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||  || |||||||||||||||||||||||||||||||||||  || |||||| |||||||||||||||||||||| | | || |    
T  11085471 aaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgattt 11085372  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    | |||| ||||||||| ||||||| ||||||    
T  11085371 ctctcgctaattttactttttctagtagtgt 11085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 18539810 - 18539932
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||| |||||||||||||||||||||||| |||| |    
T  18539810 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcactaattt 18539909  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||  ||||||| | ||||||    
T  18539910 ccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 7623660 - 7623531
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||  || |||| |||||| ||||||||||||||||||| |||| |    
T  7623660 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtcactaattt 7623561  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| | ||||| | ||||||| |||||    
T  7623560 ccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 10803726 - 10803859
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||  ||| |||||||||||||||||| |||||||||||| ||||     
T  10803726 aaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcattaatt 10803825  T
Q  330 tccctcgttaattttacattttctaatagtgtta 363  Q
    ||||||  ||||||  | ||||||| ||||||||    
T  10803826 tccctccctaatttggctttttctagtagtgtta 10803859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 29704161 - 29704048
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| ||||  |||||||| |||||||||| ||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||| |||| |    
T  29704161 aaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtcactaattt 29704062  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  29704061 ccctcgctaatttt 29704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 31250094 - 31250223
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||||  |||||||||||||||||| |||||||||||||||||  ||| ||||||| |||||||| ||||||||||||| ||||||    
T  31250094 aaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcactaatct 31250193  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||  ||||||| ||||||||| |||||    
T  31250194 tcctccctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 16299867 - 16299959
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  16299867 aaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 16299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 29215998 - 29216090
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  29215998 aaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 29216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 47263396 - 47263265
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||  || ||||| || |||||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||    
T  47263396 ctaaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaat 47263297  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||| ||||||||||| | ||||||| |||||    
T  47263296 ttccttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 49915457 - 49915572
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||| || ||||||||||  ||| |    
T  49915457 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcacaaattt 49915556  T
Q  331 ccctcgttaattttac 346  Q
    ||||| ||||||||||    
T  49915557 ccctctttaattttac 49915572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 50665761 - 50665670
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcataa 327  Q
    ||||||| ||||||| | |||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| || |||||||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataa 50665670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 4393479 - 4393357
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    | |||||||||| ||||||||||||||||||| |||| |    
T  4393479 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaattt 4393380  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||  ||||||| | ||||||    
T  4393379 ccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 26830571 - 26830441
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    |||||||| || ||||||||| ||||||||||||||||||||||| |||||||||||  | |||||||||||||||||| | |||||||||||| ||||     
T  26830571 aaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtcattaatt 26830472  T
Q  330 tccctcgttaattttacattttctaatagtg 360  Q
    | ||||  ||||||| | |||||||||||||    
T  26830471 ttcctccctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 6718723 - 6718808
Alignment:
Q  239 gtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtca 6718808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 5744426 - 5744514
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtca 5744514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 5781385 - 5781473
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtca 5781473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 6088353 - 6088265
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| |||||||||||||||| ||||||||||||| | ||||||||| ||  ||||||||| ||||||||||||||||||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtca 6088265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 15064117 - 15064029
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 15064029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 28389979 - 28390071
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||  || |||||||||||  |||| |||||||||||||    
T  28389979 aaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtca 28390071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 17269711 - 17269604
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatctccctcgttaattttacattttc 352  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||  |||| ||| ||| ||||||| | |||||    
T  17269711 aaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccatcgctaattttgctttttc 17269612  T
Q  353 taatagtg 360  Q
    || |||||    
T  17269611 tagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 10772183 - 10772053
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    ||||||||||| ||||||  | |||||||||||||||| ||||| |||||||||||| |||  ||||||||| ||||| || ||||||| |||| ||||     
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatt 10772084  T
Q  330 tccctcgttaattttacattttctaatagtg 360  Q
    ||||||||||||||||| ||||||| |||||    
T  10772083 tccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 21020074 - 21020184
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||| |  ||||||||||||||  |||| ||||||||||||| |||| ||||    
T  21020074 tttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccc 21020173  T
Q  334 tcgttaatttt 344  Q
    ||  |||||||    
T  21020174 tccctaatttt 21020184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 11837339 - 11837230
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||| |||  ||| |||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacgaatttccct 11837240  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  11837239 cgctaatttt 11837230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 23217337 - 23217244
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| ||||||||| ||||    
T  23217337 aaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcat 23217244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 46012853 - 46012765
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||||||||||||||  |||||||||||||||||| ||||||||||||||  |||| |||||||||||||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtca 46012765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 27212910 - 27212823
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    |||||||| || | ||||||| |||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||    
T  27212910 aaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttc 27212823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 5565732 - 5565858
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| ||||||||||||||||  |||||||||||||||||  ||| ||||||||||  |||| ||||||||||||| |||| |||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    |  | ||||| | ||||||| ||||||    
T  5565832 ccctgattttgctttttctagtagtgt 5565858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 8543475 - 8543603
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||  | | || |||| |||||||||| ||||||| ||| |||| |    
T  8543475 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttca-tttttccatcactaattt 8543573  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| |||||||   |||||||||||||    
T  8543574 ccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 30219344 - 30219436
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||  ||  ||||| |||||||||| || ||||||||||    
T  30219344 aaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtca 30219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 31433755 - 31433830
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||    
T  31433755 ggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttc 31433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 35579656 - 35579605
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaat 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35579656 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 37283551 - 37283658
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    |||||||||||||||||||||||||||||||  ||  |||||||||||||||||||| || ||||||||||  ||| ||||||  ||||||| | ||| |    
T  37283551 aaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcc 37283650  T
Q  353 taatagtg 360  Q
    ||||||||    
T  37283651 taatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 21088758 - 21088848
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||| ||||||||||  |||||||||||  ||||||||||||||  |||| |||||||||||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtca 21088848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 26963378 - 26963265
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||||| | |  || | |||||| |  ||||||||||||| ||||| |||| |    
T  26963378 aaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcactaattt 26963279  T
Q  331 ccctcgttaatttt 344  Q
    ||||||||||||||    
T  26963278 ccctcgttaatttt 26963265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 46942496 - 46942585
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||| || ||||||||| ||||||||||||||||| |||||||||||||||||  ||| || |||||||| |||| |||||||| ||||    
T  46942496 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtca 46942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 15501683 - 15501551
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatt-ttttccgtca-taa 327  Q
    ||||||||| ||  |||||| ||||||| | |||||||||||||| ||||||||| |||| ||| ||||| ||| |||||||||| |||||||||| |||    
T  15501683 ctaaatttaatgtgggaaaatgtaaaattcatctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaa 15501584  T
Q  328 tctccctcgttaattttacattttctaatagtg 360  Q
    | |  |||| ||||||||| ||||||| |||||    
T  15501583 tttttctcgctaattttactttttctagtagtg 15501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 13615430 - 13615513
Alignment:
Q  241 gaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||||||| |||| ||||||||||| | ||||||||||||||| ||||| |||||||||||  ||| |||| ||||||||    
T  13615430 gaaggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtca 13615513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 36543755 - 36543884
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||| | |||||||||||||||| ||||||||||||||||||  || |||| ||||||  |||| ||||||||| ||| |||| |    
T  36543755 aaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatcactaattt 36543854  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||  ||||||| | ||||||| |||||    
T  36543855 tcctccctaatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 20615472 - 20615343
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||||| |||||||||||| |||| |||||||||||| |||| |||||||| |||  ||  ||||||||||  |||| ||||||||||||  |||| |    
T  20615472 aaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctctaattt 20615373  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
     |||| ||||||||   |||||||||||||||    
T  20615372 tcctccttaatttt--cttttctaatagtgtt 20615343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 27968921 - 27968977
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||||||||| ||||||| | ||||||||||||||||| |||| ||||||||||||    
T  27968921 aaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcga 27968977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 360
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  266 aattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtg 360  Q
    ||||| |||||||||||||||||  ||||||||||||||  |||| ||||||||||||| |||| ||||||  | ||||| | ||||||| |||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 23233288 - 23233213
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttc 311  Q
    ||||||| ||||||||| |||| |||||| |||||| ||||||||||||||||  || | ||||||||| ||||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaatttc 23233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 20088406 - 20088492
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||||||| | ||||| | |||||| ||||||||||| ||||||||||||| ||  || |||||| |||| ||||| |||||||    
T  20088406 aaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 27182785 - 27182699
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||||||| |||||||   ||||| |||||||||| ||||||||||| ||| ||  |||| |||||||||| |||| |||||||    
T  27182785 aaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt 27182699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 36564568 - 36564439
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||| | | |||||||||||||||| |||||||||||| |||||  || |||| ||| ||| |||| ||||||||| ||| |||| |    
T  36564568 aaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatcactaattt 36564469  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||  ||||||| | ||||||| |||||    
T  36564468 tcctccctaatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 15490041 - 15490132
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||||||  |||||||| |||||||||| |||||  |||||||||||||||||  ||  ||||||||||  |||| ||||||| |||||    
T  15490041 aaatttagtgagagaaaacgtgaaatccctctttaatt-tgtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtca 15490132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 27711269 - 27711241
Alignment:
Q  260 ctctctaattccgtcactaaattttgcga 288  Q
    |||||||||||||||||||||||||||||    
T  27711269 ctctctaattccgtcactaaattttgcga 27711241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 50240756 - 50240844
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||||| ||||||||||  || |||||||||||||   ||||||||| ||||  |||| |||||||||||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtca 50240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 22219 - 22350
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  22219 ctaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaat 22318  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  22319 ttccctcgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 8e-44; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 1842904 - 1843034
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  1842904 aaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 1843003  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||||||||||| | ||||||| ||||||    
T  1843004 ccctcgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 22486404 - 22486533
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  22486404 aaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 22486503  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  22486504 ccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 31425640 - 31425511
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||| |||| |    
T  31425640 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtcactaattt 31425541  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | |||||||||||||    
T  31425540 ccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 21917461 - 21917334
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  21917461 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 21917362  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||  ||||||| | ||||||| |||||    
T  21917361 ctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 6849340 - 6849211
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| |    
T  6849340 aaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcactaattt 6849241  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  6849240 ccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 18217839 - 18217968
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  18217839 aaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 18217938  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  18217939 ccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 15014532 - 15014404
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||| |||    
T  15014532 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcaccaatttcc 15014433  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||||| ||||||| ||||||    
T  15014432 ctcgctaattttactttttctagtagtgt 15014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 3904603 - 3904477
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||| |||| |||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||||||| | ||||||| ||||||    
T  3904503 cgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 3872312 - 3872187
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  3872212 cgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 10050965 - 10050873
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  10050965 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtca 10050873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 45664778 - 45664870
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  45664778 aaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtca 45664870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 21623029 - 21623136
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||| ||||    
T  21623029 ctaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaat 21623128  T
Q  329 ctccctcg 336  Q
     |||||||    
T  21623129 ttccctcg 21623136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 47523777 - 47523650
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |||    
T  47523777 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 47523678  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||||  ||||||| |||||    
T  47523677 ctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 23577318 - 23577189
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  23577318 aaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 23577219  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    | |||| | ||||| | ||||||| |||||    
T  23577218 ctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 23750865 - 23750752
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||| |||| |    
T  23750865 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 23750766  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  23750765 ccctcgctaatttt 23750752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 24605848 - 24605977
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |    
T  24605848 aaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 24605947  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| | ||||| | ||||||| |||||    
T  24605948 ccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 23539248 - 23539371
Alignment:
Q  238 agtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcg 336  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||    
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcg 23539347  T
Q  337 ttaattttacattttctaatagtg 360  Q
     ||||||| | ||||||| |||||    
T  23539348 ctaattttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 27806030 - 27806157
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| | |    
T  27806030 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaattttc 27806129  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  27806130 ctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 28800890 - 28801017
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||| |||    
T  28800890 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcactaatttcc 28800989  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||| ||||||| | ||||||| |||||    
T  28800990 ctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 234 - 367
Target Start/End: Complemental strand, 7733439 - 7733305
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| | ||||| | ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  7733439 atttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 7733340  T
Q  333 ctcgttaattttacattttctaatagtgttagttg 367  Q
    |||| ||||||  | ||||||| ||||| ||||||    
T  7733339 ctcgctaatttcgctttttctagtagtgatagttg 7733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 9698667 - 9698537
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||| |||||||||| ||||||||| |||| |    
T  9698667 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaattt 9698568  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  9698567 ccctcgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 11036517 - 11036647
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  11036517 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 11036616  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||| | ||||||| | ||||||| ||||||    
T  11036617 cccttgctaattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 20429475 - 20429605
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||  | | |||||||||||||||||||||||||||||| |||| |    
T  20429475 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20429574  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||||| | ||||||| ||||||    
T  20429575 cccttgttaattttgctttttctagtagtgt 20429605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 20174030 - 20174143
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  20174030 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20174129  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  20174130 ccctcgctaatttt 20174143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 23232051 - 23232178
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |||    
T  23232051 atttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 23232150  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
    |||  ||||||| | ||||||| |||||    
T  23232151 ctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 2650945 - 2650827
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||  ||||||  |||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  343 ttacattttctaatagtgt 361  Q
    || | ||||||| ||||||    
T  2650845 tttctttttctagtagtgt 2650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 42926547 - 42926417
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatt-ttttccgtca-taatctc 331  Q
    ||||||||| | ||||| | ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| |||| |     
T  42926547 atttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtcactaatttt 42926448  T
Q  332 cctcgttaattttacattttctaatagtgtt 362  Q
    ||||| ||||||||  ||||||| |||||||    
T  42926447 cctcgctaattttattttttctagtagtgtt 42926417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 246 - 362
Target Start/End: Original strand, 48933160 - 48933277
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    ||||||| |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||| |||| | ||||| |||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  345 acattttctaatagtgtt 362  Q
     | |||||||||||||||    
T  48933260 gctttttctaatagtgtt 48933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 36636516 - 36636608
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  36636516 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 36636608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 32267357 - 32267479
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || |||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||||| |||| | ||||||||||| ||||||    
T  32267357 aaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-tttttccgtcactaatct 32267455  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||  ||||||| |||||||||    
T  32267456 ccctccctaattttgcattttcta 32267479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 37135414 - 37135284
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||| |||| |    
T  37135414 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcactaattt 37135315  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  |||||||   ||||||| ||||||    
T  37135314 ccctcactaattttgttttttctagtagtgt 37135284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 39979753 - 39979623
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| || ||||||||||  ||| |    
T  39979753 aaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 39979654  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| | ||| ||||||||||    
T  39979653 ccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 23699954 - 23699825
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||||| |||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  23699954 aaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 23699855  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  23699854 ccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 15969796 - 15969924
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatctc 331  Q
    ||||||||| ||||||| | |||| |||||||||||||||||||||||||| |||  || ||||||||||| ||||||| |||||||||||| |||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  332 cctcgttaattttacattttctaatagtg 360  Q
    |||| |||||||||| ||||||| |||||    
T  15969896 cctcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 38057642 - 38057774
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| |||||||||| |||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| ||| |||| |    
T  38057642 aaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcactaattt 38057741  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
     ||||||| ||||| | |||| || ||||||||    
T  38057742 tcctcgttgattttgctttttgtagtagtgtta 38057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 40847564 - 40847434
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || |||||||||| |||||| || ||||||||||  ||| |    
T  40847564 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaattt 40847465  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||||| ||| ||| ||||||    
T  40847464 ccctccctaattttacttttcctagtagtgt 40847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 26577279 - 26577367
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 26577367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 1907365 - 1907478
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||| |||||| ||||||| | |||||||||||||||| ||||||||||||||||||  || |||| ||||||| |||| ||||||||||||| |||| |    
T  1907365 aaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaattt 1907464  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  1907465 ccctcgctaatttt 1907478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 2093487 - 2093362
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||| |||| ||    ||| |||||||||||||||||||||||| |||| |||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || | ||||| | ||||||| |||||    
T  2093387 cgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 31042264 - 31042349
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||| || ||||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||    
T  31042264 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttcc 31042349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 816320 - 816228
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||  ||||  ||||||||||||    
T  816320 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtca 816228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 21871582 - 21871667
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccg 321  Q
    ||||||||||| |||||| ||||||||    ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  21871582 aaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 21871667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 14786752 - 14786634
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||  ||  ||||||||||||||||||||||||| |||| |||| | ||||  |||||    
T  14786752 ggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaatt 14786653  T
Q  343 ttacattttctaatagtgt 361  Q
    ||   ||||||||||||||    
T  14786652 ttgttttttctaatagtgt 14786634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 33427704 - 33427786
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||||| |||  || |||||||||||||||||||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatttttt 33427786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 1824325 - 1824237
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||  | |||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||| || ||||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtca 1824237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 24140460 - 24140552
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||| |||||||| |||  || ||||||||||||||||| || ||||||||||    
T  24140460 aaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtca 24140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 20924087 - 20923958
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| ||  ||  ||||||| ||  |||| ||||||||| ||| |||| |    
T  20924087 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaattt 20923988  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||||| ||||||| |||||    
T  20923987 ccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 4514779 - 4514867
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||  | |||||||||||||||||| ||||||||||||||||  || ||||||||||| ||||| || ||||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtca 4514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 22501604 - 22501696
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||   || ||||||||||   |||| |||||||||||||    
T  22501604 aaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtca 22501696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 36993830 - 36993918
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||||||| | ||||| | ||||| || |||||||||||||||||||||| ||| |||| |||||||||||||||| || ||||||    
T  36993830 aaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttcc 36993918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 26415448 - 26415522
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    |||||||||||||||||| ||||| |||||||||||||| |||| ||  |||||||||| ||||| |||||||||    
T  26415448 aaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttcc 26415522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 27304895 - 27304993
Alignment:
Q  247 aaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    |||||| | ||||||||||||||||||||||||||||||||   |||||||||||| || |||| |||||||| |||| |||| ||||||  |||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaatttt 27304993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 1841889 - 1841824
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||||||| |||| ||||||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttc 1841824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 10222758 - 10222701
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgat 289  Q
    |||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  10222758 aaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgat 10222701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 27130344 - 27130430
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    |||||||| || |||||| || ||||||||||  |||||||||||||| |||||||||||| |||||||||||| |||| || ||||||    
T  27130344 aaatttagagagggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttcc 27130430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 2457680 - 2457752
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgag 304  Q
    |||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||||  || |||||||||||    
T  2457680 aaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag 2457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 687887 - 687954
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaattt 299  Q
    ||||||||||| |||||| ||||||||| |||||||||| ||||||||| |||||||  |||||||||    
T  687887 aaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaaggaattt 687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 11852021 - 11852110
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||| || ||||||| | |||||| ||||||||||||||||||||||||| ||  || |||||||||||  |||| |||||||| ||||    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtca 11852110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 1822118 - 1822030
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| | ||||| | ||||| |||||||||||| ||| ||||||||  |||  ||||||||||||||||||| || ||||||||||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtca 1822030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 25777241 - 25777157
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttt 316  Q
    |||||||| || ||||||||| ||||| |||||||||| | |||||||||||| |||| ||  ||||||||||| |||| |||||    
T  25777241 aaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttatttt 25777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 15330306 - 15330247
Alignment:
Q  260 ctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttc 319  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||| ||||||| ||||||    
T  15330306 ctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaatttttc 15330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 11890276 - 11890184
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||  | | ||||||| |||| | ||||||||||||||| ||  || |||||| ||||| |||| |||||||||||||    
T  11890276 aaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtca 11890184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 5235452 - 5235420
Alignment:
Q  249 acgtaaaatccctctctaattccgtcactaaat 281  Q
    |||| ||||||||||||||||||||||||||||    
T  5235452 acgtgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 27132822 - 27132722
Alignment:
Q  260 ctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatag 358  Q
    ||||||||||| ||||||||||||||| |  ||  ||||||||| | |||| ||||||||||| |  ||| ||||||  ||||||||| ||||||| |||    
T  27132822 ctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttactttttctagtag 27132723  T
Q  359 t 359  Q
    |    
T  27132722 t 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 354
Target Start/End: Complemental strand, 10794 - 10669
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  10794 ctaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaat 10695  T
Q  329 ctccctcgttaattttacattttcta 354  Q
     ||||||| ||||||| | |||||||    
T  10694 ttccctcgctaattttgctttttcta 10669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 26708716 - 26708585
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||||    
T  26708716 ctaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaat 26708617  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| ||||||||| |||||    
T  26708616 ttccctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 26978450 - 26978319
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||||    
T  26978450 ctaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaat 26978351  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| ||||||||| |||||    
T  26978350 ttccctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 234 - 362
Target Start/End: Original strand, 618306 - 618435
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  618306 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 618405  T
Q  333 ctcgttaattttacattttctaatagtgtt 362  Q
    |||| ||||||| | |||||||||||||||    
T  618406 ctcgctaattttgctttttctaatagtgtt 618435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 16631999 - 16631874
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  16631899 cgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 7888807 - 7888936
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||| ||||| |    
T  7888807 aaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaataattt 7888906  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  7888907 ccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 25652712 - 25652583
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| | || |    
T  25652712 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcactgattt 25652613  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | |||||||||||||    
T  25652612 ccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 38837796 - 38837671
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  38837696 cgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 746993 - 746865
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  335 cgttaattttacattttctaatagtgtta 363  Q
    || ||||||| | ||||||  ||||||||    
T  746893 cgctaattttgctttttcttgtagtgtta 746865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 10494751 - 10494877
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    || ||  ||| | ||||||| ||||||    
T  10494851 cgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 28265604 - 28265474
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  28265604 aaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 28265505  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||| ||||||||| ||||||| ||||||    
T  28265504 tcctcgctaattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 12045737 - 12045866
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||| |||| |    
T  12045737 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcactaattt 12045836  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  12045837 ccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 24138972 - 24138840
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||  |||    
T  24138972 ctaaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaat 24138873  T
Q  329 ctccctcgttaattttacattttctaatagtgt 361  Q
     | ||||| ||||||| | ||||||||||||||    
T  24138872 tttcctcgctaattttgctttttctaatagtgt 24138840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 17039760 - 17039630
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  17039760 aaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 17039661  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||  ||||||| | ||||||| ||||||    
T  17039660 tcctcactaattttgctttttctagtagtgt 17039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 23408990 - 23409076
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23408990 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttt 23409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 8886980 - 8886851
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||  ||| |    
T  8886980 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacaaattt 8886881  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||| ||||||| | ||||||| |||||    
T  8886880 tcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 16121966 - 16121837
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||| |||| |||    
T  16121966 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 16121867  T
Q  333 ctcgttaattttacattttctaatagtgtt 362  Q
    |||| ||||||| | ||||||| |||||||    
T  16121866 ctcgctaattttgctttttctagtagtgtt 16121837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 236 - 359
Target Start/End: Complemental strand, 17772093 - 17771969
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  335 cgttaattttacattttctaatagt 359  Q
    || | ||||| | ||||||| ||||    
T  17771993 cgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 35620470 - 35620343
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| |||| |||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-attttttccgtcactaatttcc 35620372  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||| ||||||| | ||||||||||||||    
T  35620371 ctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 236 - 362
Target Start/End: Original strand, 40484058 - 40484185
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | || ||||||||| ||||||||| |||| |||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  335 cgttaattttacattttctaatagtgtt 362  Q
    || ||||||| | ||||||| |||||||    
T  40484158 cgctaatttttctttttctagtagtgtt 40484185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 233 - 366
Target Start/End: Complemental strand, 17036540 - 17036406
Alignment:
Q  233 aatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctc 331  Q
    ||||||| || |||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||| |||| |||||||| |||||||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctc 17036441  T
Q  332 cctcgttaattttacattttctaatagtgttagtt 366  Q
     |||  ||||||| ||||||||| |||||| ||||    
T  17036440 gctccctaattttgcattttctagtagtgtaagtt 17036406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 4125313 - 4125188
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| || ||||| |||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||||| ||||||| |||||    
T  4125213 cgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 12328353 - 12328224
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||| |||    
T  12328353 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttactaatttcc 12328254  T
Q  333 ctcgttaattttacattttctaatagtgtt 362  Q
    |||  ||||||| | ||||||| |||||||    
T  12328253 ctcactaattttgctttttctagtagtgtt 12328224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 23975645 - 23975758
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  23975645 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 23975744  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  23975745 ccctcgctaatttt 23975758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 36196404 - 36196533
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||| |||| |    
T  36196404 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtcactaattt 36196503  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  36196504 ccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 2472841 - 2472714
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2472742  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
     ||  ||||||| | ||||||| |||||    
T  2472741 ttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 5982655 - 5982785
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| || |||||||||||| ||||     
T  5982655 aaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcactaatt 5982754  T
Q  330 tccctcgttaattttacattttctaatagtg 360  Q
    ||||||| | ||||| | ||||||| |||||    
T  5982755 tccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 20959518 - 20959648
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| | || |    
T  20959518 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcagtgattt 20959617  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||  ||||||||| ||||||| ||||||    
T  20959618 tcctccctaattttactttttctagtagtgt 20959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 20188070 - 20187941
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||||||  ||||||||| |||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||| |    
T  20188070 aaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaattt 20187971  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    || ||| ||||||| | ||| |||||||||    
T  20187970 ccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 33818690 - 33818598
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||    
T  33818690 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtca 33818598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 15060983 - 15061105
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| | ||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||| |||| |||| |    
T  15060983 aaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcactaattt 15061082  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||| ||||||| | ||||||    
T  15061083 ccctcgctaattttgctttttct 15061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 8108989 - 8108860
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||| | |||| ||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  8108989 aaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 8108890  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  8108889 ccctctctaattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 234 - 354
Target Start/End: Original strand, 17986741 - 17986862
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||| | ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||| ||     
T  17986741 atttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtcactaatttct 17986840  T
Q  333 ctcgttaattttacattttcta 354  Q
    |||  ||||||||| |||||||    
T  17986841 ctcactaattttactttttcta 17986862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 36832019 - 36831890
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt-cataatct 330  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||||| |||||||||||||||||| ||| | |||| |    
T  36832019 aaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtccctaattt 36831920  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  36831919 ccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 7003857 - 7003729
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| |||| |    
T  7003857 aaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcactaattt 7003760  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| |||||||   ||||||| ||||||    
T  7003759 ccctcgctaattttgttttttctagtagtgt 7003729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 23423885 - 23423793
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| || |||| |||||    
T  23423885 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtca 23423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 36597465 - 36597374
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcataa 327  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||||||| |||  |||||||||||||||||||| || |||||||||||||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataa 36597374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 11927912 - 11927827
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||| |||||||||    
T  11927912 tttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttcc 11927827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 25397913 - 25397825
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || |||||||||| |||||| || ||||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtca 25397825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 33816887 - 33816795
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||| || ||||| ||||    
T  33816887 aaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 33816795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 13974207 - 13974078
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||||  |||  | | ||||||||| |||||||||||||| ||||  |||| |    
T  13974207 aaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtcgctaattt 13974108  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  13974107 ccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 27428141 - 27428028
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||  || |||||| | || ||||| ||||||| ||||| |||| |    
T  27428141 aaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcactaattt 27428042  T
Q  331 ccctcgttaatttt 344  Q
    |||||  |||||||    
T  27428041 ccctccctaatttt 27428028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 36716329 - 36716216
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||| |||  |  ||||||||||||||||||||||||||| ||| |||| |    
T  36716329 aaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatcactaattt 36716230  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  36716229 ccctcgctaatttt 36716216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 13620256 - 13620124
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | ||||||||||||||||| ||||| |||||||||||  ||  ||||||||||  |||| ||||||||||||| |||| |    
T  13620256 aaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaattt 13620157  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||  | ||||| | ||||||| ||||||||    
T  13620156 ccctccctgatttttctttttctagtagtgtta 13620124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 17079427 - 17079506
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc 323  Q
    ||||||| | |||||||||||||||||||||||||||||||||||  ||| ||||||| ||| |||| ||||||||||||    
T  17079427 ggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtc 17079506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 25673357 - 25673266
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||||||  |||||| | |||||||||||||||||||||||| ||||||||||  || |||||||| |||| ||| |||||||||||||    
T  25673357 aaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccgtca 25673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 33735076 - 33735009
Alignment:
Q  258 ccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    |||||| ||||||||||||||||||||||||  ||||||||| ||||| |||| ||||||||| ||||    
T  33735076 ccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcat 33735009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 10420378 - 10420268
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    ||||| || ||||||| | ||||||||||||||||  |||||||||||||||||  ||  || |||||||| |||| ||||||||||||| |||| ||||    
T  10420378 tttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcactaatttccc 10420279  T
Q  334 tcgttaatttt 344  Q
    ||  |||||||    
T  10420278 tctctaatttt 10420268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 324
Target Start/End: Complemental strand, 23974703 - 23974613
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||| ||||| | |  ||||||||||||||| ||||| |||||||| |||  ||||||||||||||  |||| |||||||||||||    
T  23974703 atttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtca 23974613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 32726855 - 32726786
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgt 301  Q
    |||||||| || |||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||    
T  32726855 aaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgt 32726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 3080825 - 3080737
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttcc 320  Q
    ||||||||||| ||||||| | ||||||||||| |||| | ||||||| ||||| || ||| |||||||||||  |||| |||||||||    
T  3080825 aaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttcc 3080737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 22649458 - 22649406
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaatttt 284  Q
    |||||||| || ||||||||| |||||| ||||||||||||||| ||||||||    
T  22649458 aaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 26301925 - 26302005
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||| ||||  |||||||||||| |||||||||||| |  ||||||||||||| |||  ||| |||| ||||||||    
T  26301925 ggaaaacgtgaaattgctctctaattccatcactaaattttacagttaaggaatttgtaaggggttttatttcttccgtca 26302005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 354
Target Start/End: Original strand, 35778155 - 35778274
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||| | |||||||| ||| |||| || | ||||||||||||  || |||||||||||  |||| ||||||||| ||| |||| |||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  335 cgttaattttacattttcta 354  Q
    |   |||||||| |||||||    
T  35778255 cccaaattttactttttcta 35778274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 31853195 - 31853161
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcga 288  Q
    ||||| |||||||||||||||||||||||||||||    
T  31853195 aaatctctctctaattccgtcactaaattttgcga 31853161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 2e-41; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 3752 - 3882
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  3752 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 3851  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
     ||||| ||||||| | ||||||| ||||||    
T  3852 tcctcgctaattttgctttttctagtagtgt 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 202784 - 202913
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| |    
T  202784 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaattt 202883  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  202884 ccctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 276263 - 276206
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgat 289  Q
    |||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  276263 aaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcgat 276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 274733 - 274681
Alignment:
Q  293 ggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||| |||||||    
T  274733 ggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaatttt 274681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 8e-41; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 41736178 - 41736307
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |    
T  41736178 aaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 41736277  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  41736278 ccctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 234 - 344
Target Start/End: Complemental strand, 18551380 - 18551269
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |    
T  18551380 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattttc 18551281  T
Q  333 ctcgttaatttt 344  Q
    |||| |||||||    
T  18551280 ctcgctaatttt 18551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 22140493 - 22140364
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  22140493 aaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 22140394  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||||||||||| | ||||||| |||||    
T  22140393 ccctcgttaattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 44476500 - 44476375
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||| |||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  335 cgttaattttacattttctaatagtg 360  Q
    || ||||||| | ||||||| |||||    
T  44476400 cgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 12779604 - 12779735
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||    
T  12779604 ctaaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaat 12779703  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  12779704 ttccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 37552231 - 37552362
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| ||||    
T  37552231 ctaaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaat 37552330  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  37552331 ttccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 13788184 - 13788054
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| | || |    
T  13788184 aaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactgattt 13788085  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||| ||||||| | ||||||| ||||||    
T  13788084 ccctcgctaattttgctttttctagtagtgt 13788054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 43408636 - 43408510
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    |  ||||||| | ||||||| ||||||    
T  43408536 cactaattttgctttttctagtagtgt 43408510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 32008958 - 32009089
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| ||||     
T  32008958 aaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatt 32009057  T
Q  330 tccctcgttaattttacattttctaatagtgt 361  Q
    | ||||| ||||||| | ||||||| ||||||    
T  32009058 ttcctcgctaattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 32300457 - 32300579
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  32300457 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 32300556  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||| ||||||| | ||||||    
T  32300557 ccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 232 - 359
Target Start/End: Complemental strand, 28319708 - 28319580
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||| |    
T  28319708 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 28319609  T
Q  331 ccctcgttaattttacattttctaatagt 359  Q
    |||||  ||||||| | ||||||| ||||    
T  28319608 ccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 23858088 - 23857958
Alignment:
Q  230 ctaaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taat 328  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||| ||||    
T  23858088 ctaaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-ttttcccgtcactaat 23857990  T
Q  329 ctccctcgttaattttacattttctaatagtg 360  Q
     ||||||| ||||||| | ||||||| |||||    
T  23857989 ttccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 13613219 - 13613109
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccc 333  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||| |||| | ||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcc 13613120  T
Q  334 tcgttaatttt 344  Q
    ||| |||||||    
T  13613119 tcgctaatttt 13613109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 28841469 - 28841340
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||  ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |||| |||    
T  28841469 atttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttcc 28841370  T
Q  333 ctcgttaattttacattttctaatagtgtt 362  Q
    |||| ||||||| | ||| ||| |||||||    
T  28841369 ctcgctaattttgcttttcctagtagtgtt 28841340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 254 - 362
Target Start/End: Original strand, 44722960 - 44723069
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttc 352  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||| ||||||| ||||||| | |||||    
T  44722960 aaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttccctcgctaattttgctttttc 44723059  T
Q  353 taatagtgtt 362  Q
    || |||||||    
T  44723060 tagtagtgtt 44723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 37724121 - 37723998
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |    
T  37724121 aaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37724022  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||| | ||||| | |||||||    
T  37724021 ccctcgctgatttttctttttcta 37723998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 1141542 - 1141664
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  1141542 aaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 1141641  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||| ||||||| | ||||||    
T  1141642 ccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 15636864 - 15636742
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  15636864 aaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 15636765  T
Q  331 ccctcgttaattttacattttct 353  Q
    |||||| ||||||| | ||||||    
T  15636764 ccctcgctaattttgctttttct 15636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 7093578 - 7093687
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||||  ||  |||||||||||||||||||||||||||||| |||| |||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  335 cgttaatttt 344  Q
    || |||||||    
T  7093678 cgctaatttt 7093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 20065203 - 20065074
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| | ||||||| ||||||||||||||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||| |||| |    
T  20065203 aaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20065104  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||| ||||||| | ||||||| |||||    
T  20065103 ccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 41637624 - 41637753
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||  ||| |    
T  41637624 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 41637723  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||||  ||||||| | ||||||| |||||    
T  41637724 ccctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 14757248 - 14757120
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| | |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
     ||| ||||||| | ||||||| ||||||    
T  14757148 ttcgctaattttgctttttctagtagtgt 14757120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 28262370 - 28262493
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||  | | |||||||||||||||||||||||||| ||| |||| |    
T  28262370 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatcactaattt 28262469  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||| | ||||||||| |||||||    
T  28262470 cccttgctaattttactttttcta 28262493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 236 - 361
Target Start/End: Complemental strand, 26243446 - 26243320
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||| |||  || ||||||||||||||||| |||||| ||| || |||| |||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
    |||||||||| | ||||||| ||||||    
T  26243346 cgttaattttgctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 21293840 - 21293727
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||| ||||||||||||||||||||||||| |||  | |||||||||||| ||||||||||||||||||| |||| |    
T  21293840 aaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcactaattt 21293741  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  21293740 ccctcgctaatttt 21293727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 23388507 - 23388394
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  | | ||||||||| ||||||||||||||||||||  ||| |    
T  23388507 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtcaccaattt 23388408  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  23388407 ccctcgctaatttt 23388394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 32185838 - 32185951
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||  | | |||||| ||||||||||||||||||||||| |||| |    
T  32185838 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcactaattt 32185937  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  32185938 ccctcgctaatttt 32185951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 27327622 - 27327714
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||    
T  27327622 aaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtca 27327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 30783344 - 30783436
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||||||| || ||||||||||    
T  30783344 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtca 30783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 365
Target Start/End: Complemental strand, 9004437 - 9004303
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||| |||||||  |||||||||||| |||||||||||||  | |||||||||| |||| |||||||||| |||||||| |||| |    
T  9004437 aaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtcactaatat 9004338  T
Q  331 ccctcgttaattttacattttctaatagtgttagt 365  Q
     ||||||||||||||  ||||||| ||||| ||||    
T  9004337 tcctcgttaattttattttttctagtagtgatagt 9004303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 31266360 - 31266450
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt 322  Q
    |||||||| || ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||    
T  31266360 aaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgt 31266450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 8430302 - 8430415
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||||||||| ||||||||||||| |||| |    
T  8430302 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcactaattt 8430401  T
Q  331 ccctcgttaatttt 344  Q
    ||| || |||||||    
T  8430402 cccccgctaatttt 8430415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 29749532 - 29749440
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||| || ||||||||||    
T  29749532 aaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtca 29749440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 26687820 - 26687706
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatc 329  Q
    ||||||||||| ||||||| | |||||| |||||||||||||||||||||||||| |  |||||||||||||| ||||| | |||||||||||| ||||     
T  26687820 aaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatt 26687721  T
Q  330 tccctcgttaatttt 344  Q
    |||||| ||||||||    
T  26687720 tccctccttaatttt 26687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 360
Target Start/End: Complemental strand, 27040003 - 27039908
Alignment:
Q  266 aattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtg 360  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||| ||||||  ||||||| | ||||||| |||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 232 - 365
Target Start/End: Original strand, 18609520 - 18609654
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||| ||||||||||| | | || |||||||||||| ||||||||||||||| |||  ||||| ||||||| |||| |    
T  18609520 aaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaattt 18609619  T
Q  331 ccctcgttaattttacattttctaatagtgttagt 365  Q
     |||| ||| |||||| ||| ||||||||||||||    
T  18609620 tcctccttatttttacttttcctaatagtgttagt 18609654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 8763640 - 8763732
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||||||||||| | |||||| ||||||||||||||| ||||||||  ||| |||||||||||| |  |||| |||||||||||||    
T  8763640 aaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtca 8763732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 38362388 - 38362308
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||||||||||| | |||||||| |||||| |||||| |||  || |||||||||||||||||||||||||||||||    
T  38362388 ggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtca 38362308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 18916529 - 18916444
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttt 317  Q
    |||||||| || ||||||| | ||||||||||||||||| |||||||||||||||||| ||  ||||||||||| |||| ||||||    
T  18916529 aaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttattttt 18916444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 27523019 - 27523084
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaattt 299  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||    
T  27523019 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 29998685 - 29998633
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcg 287  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  29998685 tttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 36373906 - 36373995
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc 323  Q
    ||||||||||| |||||| || |||| |||||  ||||| ||||||||||||| |||| |||||||||| |||| |||| ||||||||||||    
T  36373906 aaatttagtgagggaaaatgtgaaattcctct--aattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtc 36373995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 37802507 - 37802451
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 288  Q
    |||||||| || |||||||||||||||  ||||||||||||||||||||||||||||    
T  37802507 aaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcga 37802451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 44366123 - 44366033
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcat 325  Q
    |||||||| | ||||| | |||||||||||||||||| ||| | ||||||| ||  || ||||||||||||||||| |||||||| |||||    
T  44366123 tttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 44366033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 40018808 - 40018921
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | ||||| |||||||||||  ||||| |||||||| |  || |||||||| || ||||| ||||||||||||| |||| |    
T  40018808 aaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaattt 40018907  T
Q  331 ccctcgttaatttt 344  Q
    ||||  ||||||||    
T  40018908 ccctttttaatttt 40018921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 35697483 - 35697551
Alignment:
Q  254 aaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgt 322  Q
    |||| ||||||||||||||||||||||||||||||  ||  ||||||||||  |||| |||||||||||    
T  35697483 aaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgt 35697551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 36550844 - 36550971
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||| ||||||| ||||||||||||||||  ||  || |||||||| |||| ||||||||| ||| |||| |||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggattt-attttttccatcactaatttcc 36550942  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    |||  |||||||   ||||||| ||||||    
T  36550943 ctctctaattttgttttttctagtagtgt 36550971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 2556130 - 2556233
Alignment:
Q  261 tctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagt 359  Q
    |||||||||||||||||||||||| | |  ||| |||||||||| ||||| ||||||||| ||| |||| | ||||  ||||||||| |||| || ||||    
T  2556130 tctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaattttactttttttagtagt 2556229  T
Q  360 gtta 363  Q
    ||||    
T  2556230 gtta 2556233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 27058445 - 27058407
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattc 270  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27058445 aaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 13134749 - 13134657
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||||| || ||||||| | |||||||| |||||||  |||| |||||||| ||| |||  || |||||||| |||| |||||||||||||    
T  13134749 aaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtca 13134657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 9590490 - 9590568
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||||| ||||||||||  || ||||||||||||||| ||| ||||| | |   ||||||||||||||||||    
T  9590490 aaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtca 9590568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 9358 - 9228
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  9358 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 9259  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||| | ||||||| ||||||    
T  9258 ccctcactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 6108 - 5995
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |    
T  6108 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 6009  T
Q  331 ccctcgttaatttt 344  Q
    |||||| |||||||    
T  6008 ccctcgctaatttt 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 15120 - 14989
Alignment:
Q  231 taaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatc 329  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||| |||| ||||     
T  15120 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaatt 15021  T
Q  330 tccctcgttaattttacattttctaatagtgt 361  Q
    ||||||| ||||||| | ||||||| ||||||    
T  15020 tccctcgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 439977 - 440103
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  335 cgttaattttacattttctaatagtgt 361  Q
     | ||||||||| ||||||| ||||||    
T  440077 tgctaattttactttttctagtagtgt 440103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 359
Target Start/End: Original strand, 7515 - 7643
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||| |||||||||| |||| |    
T  7515 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaattt 7614  T
Q  331 ccctcgttaattttacattttctaatagt 359  Q
    |||||| ||||||| | ||||||| ||||    
T  7615 ccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 19615 - 19743
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  19615 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19714  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
    || | ||||||| | ||||||| ||||||    
T  19715 cttgctaattttgctttttctagtagtgt 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 26495 - 26623
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| |||    
T  26495 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 26594  T
Q  333 ctcgttaattttacattttctaatagtgt 361  Q
     ||  ||||||| | ||||||| ||||||    
T  26595 gtcactaattttgctttttctagtagtgt 26623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 236 - 359
Target Start/End: Original strand, 182544 - 182668
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| |||||    
T  182544 ttagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 182643  T
Q  335 cgttaattttacattttctaatagt 359  Q
    || ||||||||| ||||||| ||||    
T  182644 cgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 219648 - 219775
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  333 ctcgttaattttacattttctaatagtg 360  Q
     ||| ||||||| | ||||||| |||||    
T  219748 gtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 323
Target Start/End: Complemental strand, 215781 - 215701
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc 323  Q
    ||||||| ||||||||||||||||||||||||||||||        |||||||  |||||||||||||||||||||||||||||||||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtc 215701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 7466 - 7589
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||| |||||| ||||||| |||||||||||||||||||| |||| |    
T  7466 aaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcactaattt 7565  T
Q  331 ccctcgttaattttacattttcta 354  Q
     ||||||||||||||| |||||||    
T  7566 tcctcgttaattttactttttcta 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 8237 - 8116
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||| |||    
T  8237 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 8138  T
Q  333 ctcgttaattttacattttcta 354  Q
    |||| ||||||| | |||||||    
T  8137 ctcgctaattttgctttttcta 8116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 21969 - 21848
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctcc 332  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||| |||    
T  21969 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 21870  T
Q  333 ctcgttaattttacattttcta 354  Q
    |||| ||||||| | |||||||    
T  21869 ctcgctaattttgctttttcta 21848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 84313 - 84442
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||||| ||  | | |||||||||||||||||||||||||||||| |||| |    
T  84313 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 84412  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
    |||| | ||||||| | ||||||| |||||    
T  84413 cccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 236 - 354
Target Start/End: Complemental strand, 84799 - 84680
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccct 334  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||| |||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  335 cgttaattttacattttcta 354  Q
    |  ||||||| | |||||||    
T  84699 cactaattttgctttttcta 84680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 121113 - 121030
Alignment:
Q  235 tttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttttt 318  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||| |||||||    
T  121113 tttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttt 121030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 43927 - 44059
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| |||||||||||||| | ||||||||||||| | ||||||||||||  || ||||||||||||||||||||||||||| ||| |||| |    
T  43927 aaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaattt 44026  T
Q  331 ccctcgttaattttacattttctaatagtgtta 363  Q
    |||||| ||||||| | ||||||| ||||||||    
T  44027 ccctcgctaatttttctttttctagtagtgtta 44059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 363
Target Start/End: Complemental strand, 1046 - 915
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttca-ttttttccgtca-taatctc 331  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| | |||||||||||| |||| ||    
T  1046 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgtcagtaatttc 947  T
Q  332 cctcgttaattttacattttctaatagtgtta 363  Q
    ||||| ||||||| | ||||||| ||||||||    
T  946 cctcgctaattttgctttttctagtagtgtta 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 10168 - 10260
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  10168 aaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtca 10260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 12663 - 12793
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    |||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||  |  |||||| |||||||||||||||||||||||| |||| |    
T  12663 aaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtcactaattt 12761  T
Q  331 ccctcgttaattttacattttctaatagtgtt 362  Q
    |||||| ||||||| | ||||| | |||||||    
T  12762 ccctcgctaattttgctttttcaagtagtgtt 12793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 74670 - 74540
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||| || ||||||||||  ||| |    
T  74670 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcacaaattt 74571  T
Q  331 ccctcgttaattttacattttctaatagtgt 361  Q
    |||||  ||||||||| ||| ||| ||||||    
T  74570 ccctccctaattttacttttcctagtagtgt 74540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 58592 - 58684
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||| || ||||||||||    
T  58592 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtca 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 6805 - 6928
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc-ataatct 330  Q
    ||||||||||| ||||||| | |||| ||||||||||||||||| |||||||||| |  ||| |||||| || ||||||||||||||||||| ||||| |    
T  6805 aaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataattt 6904  T
Q  331 ccctcgttaattttacattttcta 354  Q
    |||||| ||||||| | |||||||    
T  6905 ccctcgctaattttgctttttcta 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 39820 - 39702
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |  | | |||||| ||||||||||||||||||| ||| |||| ||||||| |||||    
T  39820 ggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgctaatt 39721  T
Q  343 ttacattttctaatagtgt 361  Q
    || | ||||||| ||||||    
T  39720 ttgctttttctagtagtgt 39702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 173456 - 173584
Alignment:
Q  234 atttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaa--tttgtgaggaatttcattttttccgtca-taatct 330  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||  || |||  ||| |||| ||||||||||||||||||| |||| |    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaat-t 173554  T
Q  331 ccctcgttaattttacattttctaatagtg 360  Q
     ||||| ||||||| | |||||||||||||    
T  173555 tcctcgctaattttgctttttctaatagtg 173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 37916 - 37824
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    |||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||  |   |||||||||||||||| |||||||||||||    
T  37916 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtca 37824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 3279 - 3161
Alignment:
Q  244 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatt 342  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||  | | ||||||||||||| || || |||||||||| |||| ||||||  |||||    
T  3279 ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctccctaatt 3180  T
Q  343 ttacattttctaatagtgt 361  Q
    || | ||||||| ||||||    
T  3179 tttctttttctattagtgt 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 74845 - 74723
Alignment:
Q  234 atttagtgaaggaaaa-cgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctc 331  Q
    ||||||||| |||||| | | ||||||||||||||||| ||||||||||||| |||  |  ||||||||||| ||||||||||||||||||| |||| ||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttc 74746  T
Q  332 cctcgttaattttacattttcta 354  Q
    ||| | ||||||| | |||||||    
T  74745 ccttgctaattttgccttttcta 74723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 17705 - 17633
Alignment:
Q  273 tcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaatttt 344  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 17633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 10902 - 10994
Alignment:
Q  232 aaatttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| | ||||| | |||| |||||||||||| |||||||||||||| ||  |||||||||||||||||||| || |||| |||||    
T  10902 aaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtca 10994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 1644 - 1556
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||| ||||||||||||  || ||||||||||||||  ||||||||| ||||| |||| |||||||||||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtca 1556  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 112352 - 112392
Alignment:
Q  246 aaaacgtaaaatccctctctaattccgtcactaaattttgc 286  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  112352 aaaacgttaaatccctctctaattccgtcattaaattttgc 112392  T

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Target: scaffold0554 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 9881 - 9952
Alignment:
Q  293 ggaatttgtgaggaatttcattttttccgtca-taatctccctcgttaattttacattttctaatagtgtta 363  Q
    |||||||||||| ||||||||||||||| ||| |||| || |||| ||||||| | ||||||| ||||||||    
T  9881 ggaatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtgtta 9952  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 36316 - 36404
Alignment:
Q  236 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtca 324  Q
    ||||||| ||| ||| | ||||| ||||||||||  || ||||||||||| ||  ||||||||| ||| | |||| |||||||||||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtca 36404  T

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