View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19324_low_3 (Length: 472)

Name: NF19324_low_3
Description: NF19324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19324_low_3
NF19324_low_3
[»] chr3 (63 HSPs)
chr3 (144-461)||(47575008-47575326)
chr3 (1-108)||(35995748-35995855)
chr3 (1-108)||(21633097-21633204)
chr3 (5-166)||(30500051-30500214)
chr3 (1-108)||(14262106-14262213)
chr3 (2-108)||(4204778-4204884)
chr3 (1-171)||(16722192-16722366)
chr3 (1-108)||(15328661-15328768)
chr3 (1-171)||(17465370-17465545)
chr3 (5-108)||(52552762-52552865)
chr3 (2-108)||(43572593-43572699)
chr3 (1-108)||(14171656-14171763)
chr3 (1-108)||(20853766-20853873)
chr3 (2-171)||(45970117-45970291)
chr3 (1-171)||(9266978-9267152)
chr3 (1-171)||(33372607-33372779)
chr3 (1-166)||(14162072-14162240)
chr3 (2-171)||(19112767-19112941)
chr3 (1-108)||(38283751-38283858)
chr3 (1-108)||(49986729-49986835)
chr3 (1-108)||(45003697-45003804)
chr3 (1-108)||(47575343-47575449)
chr3 (1-108)||(5800806-5800913)
chr3 (35-171)||(9267210-9267349)
chr3 (35-163)||(52552923-52553055)
chr3 (36-171)||(14171822-14171961)
chr3 (388-449)||(47569987-47570045)
chr3 (35-108)||(14161941-14162014)
chr3 (35-184)||(14262271-14262424)
chr3 (35-108)||(45969985-45970058)
chr3 (35-108)||(47575507-47575580)
chr3 (35-171)||(5800608-5800748)
chr3 (118-166)||(27946117-27946165)
chr3 (36-108)||(33372476-33372548)
chr3 (35-163)||(35995913-35996042)
chr3 (134-171)||(17465705-17465742)
chr3 (67-108)||(20853963-20854004)
chr3 (67-108)||(43572459-43572500)
chr3 (39-108)||(45003566-45003635)
chr3 (118-177)||(27946187-27946246)
chr3 (118-164)||(19720343-19720389)
chr3 (122-164)||(20854021-20854063)
chr3 (133-171)||(21632904-21632942)
chr3 (35-171)||(30500276-30500415)
chr3 (118-164)||(33372416-33372462)
chr3 (38-108)||(35740885-35740955)
chr3 (66-108)||(49986598-49986640)
chr3 (118-171)||(11003735-11003788)
chr3 (67-108)||(11003802-11003843)
chr3 (121-166)||(15328786-15328831)
chr3 (118-171)||(16721994-16722047)
chr3 (67-108)||(16722061-16722102)
chr3 (35-108)||(17649245-17649318)
chr3 (35-108)||(19113000-19113073)
chr3 (134-171)||(20853698-20853735)
chr3 (35-108)||(21632966-21633039)
chr3 (118-171)||(35995681-35995734)
chr3 (71-162)||(36990931-36991025)
chr3 (71-162)||(37016371-37016465)
chr3 (35-108)||(38283620-38283693)
chr3 (118-163)||(43572400-43572445)
chr3 (118-171)||(45969918-45969971)
chr3 (118-171)||(49986850-49986903)
[»] chr8 (36 HSPs)
chr8 (1-171)||(17622893-17623064)
chr8 (2-166)||(42112993-42113160)
chr8 (1-171)||(43851668-43851841)
chr8 (1-108)||(21148007-21148114)
chr8 (1-108)||(10108571-10108678)
chr8 (1-108)||(26136886-26136993)
chr8 (1-171)||(7689724-7689898)
chr8 (1-108)||(14767577-14767684)
chr8 (1-108)||(14820495-14820602)
chr8 (1-108)||(22494585-22494692)
chr8 (1-108)||(26532853-26532960)
chr8 (5-169)||(5555074-5555242)
chr8 (1-108)||(42605954-42606061)
chr8 (1-105)||(2583521-2583625)
chr8 (1-163)||(30789519-30789684)
chr8 (1-86)||(43481406-43481491)
chr8 (35-184)||(10108360-10108513)
chr8 (40-108)||(10171383-10171451)
chr8 (36-108)||(30789743-30789815)
chr8 (35-171)||(14820298-14820437)
chr8 (35-108)||(17623122-17623195)
chr8 (35-108)||(2583390-2583463)
chr8 (118-171)||(5554872-5554925)
chr8 (35-108)||(22494455-22494527)
chr8 (35-107)||(5554940-5555012)
chr8 (35-105)||(43481549-43481619)
chr8 (31-105)||(44162736-44162810)
chr8 (134-171)||(7689527-7689564)
chr8 (118-171)||(10171465-10171518)
chr8 (121-166)||(14767514-14767559)
chr8 (122-171)||(18044153-18044202)
chr8 (35-108)||(21144740-21144813)
chr8 (35-108)||(21148171-21148244)
chr8 (118-166)||(10108692-10108740)
chr8 (118-166)||(14820616-14820664)
chr8 (118-166)||(21147944-21147992)
[»] chr6 (29 HSPs)
chr6 (1-171)||(18500318-18500491)
chr6 (1-108)||(30618162-30618269)
chr6 (1-108)||(32017608-32017713)
chr6 (1-108)||(26385348-26385455)
chr6 (1-108)||(24732139-24732246)
chr6 (1-108)||(33714557-33714664)
chr6 (4-103)||(33637732-33637831)
chr6 (5-96)||(30458983-30459074)
chr6 (2-108)||(14680952-14681058)
chr6 (1-108)||(9481383-9481490)
chr6 (4-97)||(2299392-2299484)
chr6 (31-108)||(9854118-9854195)
chr6 (35-108)||(33637629-33637702)
chr6 (1-49)||(3229992-3230040)
chr6 (35-171)||(30617970-30618105)
chr6 (118-173)||(26385596-26385651)
chr6 (15-97)||(10321811-10321893)
chr6 (35-171)||(9481185-9481325)
chr6 (35-164)||(32017739-32017871)
chr6 (35-97)||(10321966-10322028)
chr6 (122-171)||(18500655-18500704)
chr6 (67-108)||(19284199-19284240)
chr6 (118-171)||(24731938-24731991)
chr6 (118-164)||(34884567-34884613)
chr6 (71-108)||(2299580-2299617)
chr6 (122-171)||(26385281-26385330)
chr6 (68-108)||(9154950-9154990)
chr6 (119-163)||(10321744-10321788)
chr6 (135-171)||(24732276-24732312)
[»] chr1 (40 HSPs)
chr1 (1-108)||(30299432-30299539)
chr1 (1-171)||(39826053-39826227)
chr1 (1-171)||(39711273-39711447)
chr1 (1-166)||(17606509-17606676)
chr1 (2-97)||(52058092-52058187)
chr1 (3-108)||(39970716-39970821)
chr1 (3-108)||(4907032-4907137)
chr1 (1-163)||(34749149-34749314)
chr1 (1-108)||(42510084-42510191)
chr1 (1-108)||(48072162-48072269)
chr1 (1-83)||(13229932-13230014)
chr1 (2-166)||(20995871-20996037)
chr1 (2-108)||(24467830-24467935)
chr1 (1-171)||(33628693-33628867)
chr1 (1-106)||(43539548-43539653)
chr1 (2-108)||(18462487-18462592)
chr1 (1-108)||(29696764-29696866)
chr1 (13-108)||(8293020-8293115)
chr1 (39-175)||(17606303-17606447)
chr1 (1-96)||(7473874-7473969)
chr1 (35-108)||(4907197-4907270)
chr1 (35-108)||(43539417-43539490)
chr1 (67-171)||(39826313-39826421)
chr1 (35-171)||(39970880-39971021)
chr1 (42-171)||(18342261-18342392)
chr1 (118-171)||(52058330-52058383)
chr1 (35-106)||(33628925-33628996)
chr1 (67-171)||(18462289-18462396)
chr1 (67-163)||(24467640-24467739)
chr1 (35-171)||(39711077-39711215)
chr1 (35-108)||(8292874-8292947)
chr1 (118-171)||(29696568-29696621)
chr1 (122-171)||(30299235-30299284)
chr1 (35-108)||(30299301-30299374)
chr1 (35-108)||(34749340-34749413)
chr1 (35-97)||(20995750-20995812)
chr1 (118-171)||(4906965-4907018)
chr1 (67-108)||(52058275-52058316)
chr1 (118-166)||(33629012-33629060)
chr1 (135-171)||(52058014-52058050)
[»] chr2 (46 HSPs)
chr2 (1-171)||(15106268-15106440)
chr2 (1-164)||(26560566-26560731)
chr2 (1-176)||(26236296-26236474)
chr2 (1-108)||(22263261-22263368)
chr2 (1-171)||(23806153-23806327)
chr2 (1-171)||(17850590-17850763)
chr2 (1-171)||(19251671-19251844)
chr2 (2-108)||(20498947-20499053)
chr2 (2-98)||(13254638-13254734)
chr2 (8-108)||(30390529-30390629)
chr2 (2-97)||(39878304-39878399)
chr2 (1-108)||(42670789-42670896)
chr2 (5-102)||(13284484-13284581)
chr2 (8-108)||(17463299-17463399)
chr2 (1-108)||(26136018-26136125)
chr2 (1-108)||(33290250-33290357)
chr2 (36-171)||(17850822-17850961)
chr2 (35-171)||(26560789-26560930)
chr2 (35-108)||(23806022-23806095)
chr2 (35-108)||(23854901-23854974)
chr2 (35-164)||(26236137-26236270)
chr2 (42-166)||(19251479-19251606)
chr2 (1-46)||(23854798-23854843)
chr2 (36-108)||(15106137-15106209)
chr2 (35-107)||(22263426-22263498)
chr2 (118-166)||(23854696-23854744)
chr2 (35-163)||(26135828-26135960)
chr2 (35-108)||(13284643-13284716)
chr2 (35-108)||(17463161-17463234)
chr2 (122-171)||(26136143-26136192)
chr2 (118-163)||(34548585-34548630)
chr2 (35-108)||(42670954-42671027)
chr2 (118-164)||(30390469-30390515)
chr2 (118-171)||(13254500-13254553)
chr2 (118-171)||(17463413-17463466)
chr2 (118-171)||(20498750-20498803)
chr2 (71-108)||(21482151-21482188)
chr2 (35-96)||(39878184-39878245)
chr2 (122-175)||(44999435-44999487)
chr2 (118-174)||(13254758-13254814)
chr2 (118-162)||(13284735-13284779)
chr2 (135-171)||(23046710-23046746)
chr2 (135-171)||(23855033-23855069)
chr2 (118-162)||(30958696-30958740)
chr2 (118-178)||(39878099-39878158)
chr2 (118-166)||(42670725-42670773)
[»] chr4 (52 HSPs)
chr4 (1-166)||(37012715-37012884)
chr4 (1-108)||(7819215-7819322)
chr4 (1-108)||(9396900-9397007)
chr4 (1-176)||(38573967-38574145)
chr4 (1-171)||(46046433-46046601)
chr4 (1-106)||(4356082-4356187)
chr4 (1-108)||(9516680-9516787)
chr4 (4-105)||(35376332-35376433)
chr4 (1-164)||(48259952-48260118)
chr4 (2-171)||(13131943-13132117)
chr4 (1-108)||(15640916-15641023)
chr4 (1-95)||(3018213-3018307)
chr4 (1-163)||(31944151-31944317)
chr4 (4-108)||(26252441-26252545)
chr4 (1-108)||(31090131-31090238)
chr4 (1-107)||(18667490-18667596)
chr4 (1-108)||(34064052-34064159)
chr4 (1-108)||(48579936-48580043)
chr4 (1-171)||(9619180-9619354)
chr4 (2-108)||(3273823-3273928)
chr4 (1-108)||(18713161-18713268)
chr4 (35-171)||(35376166-35376305)
chr4 (35-174)||(9396699-9396842)
chr4 (51-164)||(12904757-12904873)
chr4 (35-171)||(37012942-37013081)
chr4 (35-108)||(3018082-3018155)
chr4 (36-175)||(38574204-38574347)
chr4 (118-164)||(31090383-31090429)
chr4 (35-108)||(9619050-9619123)
chr4 (35-108)||(26252338-26252411)
chr4 (35-108)||(34064217-34064290)
chr4 (118-166)||(36887688-36887736)
chr4 (36-108)||(46046660-46046732)
chr4 (121-174)||(3018011-3018064)
chr4 (118-151)||(12904906-12904939)
chr4 (122-171)||(13132265-13132314)
chr4 (118-171)||(31218303-31218356)
chr4 (68-108)||(7819084-7819124)
chr4 (35-169)||(15640721-15640858)
chr4 (36-108)||(31944020-31944092)
chr4 (121-164)||(3273631-3273674)
chr4 (118-164)||(3018332-3018378)
chr4 (118-164)||(9516932-9516978)
chr4 (38-108)||(20069538-20069608)
chr4 (122-164)||(41947180-41947222)
chr4 (67-108)||(3273692-3273733)
chr4 (35-108)||(4355951-4356024)
chr4 (118-171)||(9618983-9619036)
chr4 (118-163)||(31090071-31090116)
chr4 (118-171)||(34063985-34064038)
chr4 (135-171)||(15641055-15641091)
chr4 (119-171)||(41946968-41947020)
[»] chr7 (46 HSPs)
chr7 (1-171)||(12006544-12006717)
chr7 (1-106)||(44816907-44817012)
chr7 (1-171)||(23704862-23705035)
chr7 (1-108)||(20458761-20458868)
chr7 (1-171)||(10409575-10409748)
chr7 (9-108)||(38879794-38879893)
chr7 (3-108)||(20963565-20963670)
chr7 (1-171)||(25772367-25772540)
chr7 (1-108)||(20419606-20419713)
chr7 (1-108)||(41600028-41600135)
chr7 (5-95)||(33162740-33162830)
chr7 (5-108)||(23383570-23383673)
chr7 (1-96)||(48672361-48672456)
chr7 (2-171)||(31851244-31851415)
chr7 (1-93)||(1250291-1250383)
chr7 (36-171)||(28218181-28218321)
chr7 (1-164)||(48648272-48648438)
chr7 (35-171)||(7658204-7658340)
chr7 (36-171)||(16995203-16995341)
chr7 (1-108)||(24194992-24195104)
chr7 (36-171)||(12006776-12006915)
chr7 (35-108)||(38879959-38880032)
chr7 (36-108)||(41600194-41600266)
chr7 (36-171)||(28218399-28218538)
chr7 (35-108)||(6465924-6465997)
chr7 (122-171)||(24195198-24195247)
chr7 (35-108)||(31851474-31851547)
chr7 (119-171)||(23383823-23383875)
chr7 (36-171)||(48672515-48672654)
chr7 (6-108)||(7658041-7658142)
chr7 (35-108)||(1250441-1250514)
chr7 (118-171)||(7657972-7658025)
chr7 (35-108)||(25772566-25772639)
chr7 (35-108)||(48648464-48648537)
chr7 (67-105)||(23704734-23704772)
chr7 (135-164)||(1250545-1250574)
chr7 (118-171)||(20419539-20419592)
chr7 (67-108)||(20458958-20458999)
chr7 (118-171)||(20963815-20963868)
chr7 (35-108)||(23383735-23383808)
chr7 (118-171)||(38879726-38879779)
chr7 (122-171)||(41599961-41600010)
chr7 (118-171)||(41600280-41600333)
chr7 (118-171)||(48672280-48672333)
chr7 (135-171)||(23704665-23704701)
chr7 (123-163)||(48648554-48648594)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-108)||(8524-8630)
scaffold0141 (121-171)||(8328-8378)
[»] chr5 (43 HSPs)
chr5 (1-166)||(7125926-7126094)
chr5 (1-163)||(993761-993924)
chr5 (1-108)||(14144102-14144209)
chr5 (1-108)||(24650770-24650877)
chr5 (1-171)||(17762483-17762657)
chr5 (2-171)||(23979104-23979276)
chr5 (1-160)||(41001370-41001530)
chr5 (1-171)||(6817126-6817299)
chr5 (4-108)||(14411870-14411974)
chr5 (1-108)||(4919060-4919167)
chr5 (1-108)||(20709282-20709389)
chr5 (1-108)||(31799710-31799817)
chr5 (7-164)||(30512298-30512459)
chr5 (7-164)||(30552638-30552799)
chr5 (1-108)||(24837239-24837346)
chr5 (2-108)||(24074504-24074610)
chr5 (8-108)||(29445014-29445114)
chr5 (1-108)||(18336657-18336764)
chr5 (4-105)||(27159063-27159162)
chr5 (35-166)||(27159192-27159324)
chr5 (35-171)||(24074306-24074446)
chr5 (35-171)||(14143905-14144044)
chr5 (35-108)||(7126152-7126225)
chr5 (35-105)||(17762355-17762425)
chr5 (35-108)||(24650934-24651007)
chr5 (118-166)||(20709533-20709581)
chr5 (118-164)||(29444816-29444862)
chr5 (35-108)||(6817356-6817429)
chr5 (118-171)||(14411700-14411753)
chr5 (35-95)||(14411780-14411840)
chr5 (118-161)||(22571090-22571133)
chr5 (118-164)||(18336477-18336523)
chr5 (67-108)||(994013-994054)
chr5 (118-171)||(17762286-17762339)
chr5 (39-108)||(20959330-20959399)
chr5 (7-96)||(22571159-22571248)
chr5 (118-171)||(24837172-24837225)
chr5 (118-171)||(24837491-24837544)
chr5 (35-108)||(29444876-29444949)
chr5 (35-108)||(31799875-31799948)
chr5 (67-108)||(41001620-41001661)
chr5 (118-166)||(14144223-14144271)
chr5 (134-166)||(27158999-27159031)
[»] scaffold0477 (1 HSPs)
scaffold0477 (4-108)||(4952-5056)
[»] scaffold0361 (2 HSPs)
scaffold0361 (1-108)||(4764-4871)
scaffold0361 (118-171)||(4565-4618)
[»] scaffold0809 (2 HSPs)
scaffold0809 (2-165)||(1612-1775)
scaffold0809 (35-171)||(1414-1553)
[»] scaffold0185 (3 HSPs)
scaffold0185 (1-108)||(3939-4046)
scaffold0185 (118-164)||(3879-3925)
scaffold0185 (35-108)||(4104-4177)
[»] scaffold0881 (1 HSPs)
scaffold0881 (1-93)||(305-397)
[»] scaffold0449 (3 HSPs)
scaffold0449 (4-171)||(7229-7404)
scaffold0449 (35-108)||(7434-7507)
scaffold0449 (118-171)||(7522-7575)
[»] scaffold0176 (1 HSPs)
scaffold0176 (35-164)||(15867-15996)
[»] scaffold0117 (2 HSPs)
scaffold0117 (34-108)||(12216-12290)
scaffold0117 (120-166)||(12306-12352)
[»] scaffold0586 (1 HSPs)
scaffold0586 (127-166)||(5865-5904)
[»] scaffold0352 (1 HSPs)
scaffold0352 (118-171)||(6001-6054)


Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 144 - 461
Target Start/End: Complemental strand, 47575326 - 47575008
Alignment:
Q  144 atattacaaggacgaaaagaggtgtttatcctctaacaaattaaacgtgtgacacaaatggaggagtttccatttgcaattttgcatgtatcagcctttg 243  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47575326 atattacaaggacgaaaagagatatttatcctctaacaaattaaacgtgtgacacaaatggaggagtttccatttgcaattttgcatgtatcagcctttg 47575227  T
Q  244 atcatgcacctcccatcactcacaaacaaatactataaataagtaacatgtcatgtaccagagacactacaattgttctcacatcgctttcaatcataaa 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47575226 atcatgcacctcccatcactcacaaacaaatactataaataagtaacatgtcatgtactagagacactacaattgttctcacatcgctttcaatcataaa 47575127  T
Q  344 ttgttctgagaaaagagtgg-nnnnnnnnntccaaagagtgaagtgagatggcttactacaatcaaaacactcctcctgctattaacgttaacgtttctg 442  Q
    ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47575126 ttgttctgagaaaagagtggaaaaaaaaaatccaaagagtgaagtgagatggcttactacaatcaaaacactcctcctgctattaacgttaacgtttctg 47575027  T
Q  443 gtccacctcctccaccaca 461  Q
    |||||||||||||||||||    
T  47575026 gtccacctcctccaccaca 47575008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35995855 - 35995748
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||| ||    
T  35995855 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggac 35995756  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  35995755 aaaatcta 35995748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21633097 - 21633204
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||||| ||    
T  21633097 cctccacttttggtccctcattttatgtgccatgtatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  21633197 aaaatcta 21633204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 30500214 - 30500051
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||| ||||||    
T  30500214 cacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaa 30500115  T
Q  105 tct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||  |         ||||||||||||| | |||||||||||||||||| ||| ||||||||||    
T  30500114 tctaaatttttttttacagggactaaaaccgaaattcgctaatattacagggatgaaaagaggt 30500051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14262213 - 14262106
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |  |||||||||||||||||||| |||||||||| ||    
T  14262213 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 14262114  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  14262113 aaaatcta 14262106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 4204884 - 4204778
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||||| |||    
T  4204884 ctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 4204785  T
Q  102 aaatcta 108  Q
     ||||||    
T  4204784 taatcta 4204778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16722192 - 16722366
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| |  |||||||||||||||||| | |||||||||| ||    
T  16722192 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggac 16722291  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             |||||||||||||   |||||||||||||||||| |||||||||||||| ||||    
T  16722292 aaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacgaaaagaggtattta 16722366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15328661 - 15328768
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |  |||||||||||||| ||||| |||||||||| ||    
T  15328661 cctccacttttggtctctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggac 15328760  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  15328761 aaaatcta 15328768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17465545 - 17465370
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagga-a 99  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||| ||||||||||| |    
T  17465545 cctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaattacaggaga 17465446  T
Q  100 caaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | |||||||             ||||| |||||||||| ||||||||||||||| |||||| ||||||||| ||||    
T  17465445 cgaaatctaaatcattttttttacaggtactaaaatcagaattcgctaatattaaaaggacaaaaagaggtattta 17465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 52552865 - 52552762
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaa 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |  || ||||||||||||||||| |||||||||| ||||||    
T  52552865 cacttttggtccctcattttacgtgtcatgtatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaa 52552766  T
Q  105 tcta 108  Q
    ||||    
T  52552765 tcta 52552762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 43572593 - 43572699
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||||| |||    
T  43572593 ctccacttttggtccctcattttacgtgtcatttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 43572692  T
Q  102 aaatcta 108  Q
     ||||||    
T  43572693 gaatcta 43572699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14171763 - 14171656
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||| | |||||||||| ||    
T  14171763 cctccatttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggac 14171664  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  14171663 aaaatcta 14171656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20853873 - 20853766
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||||||||||||||| | |||||| ||| ||    
T  20853873 cctccacttttggtccctcattttacgtgccatgtatgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggac 20853774  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  20853773 aaaatcta 20853766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 45970117 - 45970291
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    ||||||||||||||||||| |||||||||| |||    
T  45970117 ctccacttttggtccctcattttacgtgtcatgtatgcggattctgcttacgtggtggaatggggaaccaaaagtggaagaatctgaaattacagggaca 45970216  T
Q  102 aaatctannnnnnnnn-----acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||| ||              ||||||||||||| | |||||| ||||||||||| |||||||||||||| ||||    
T  45970217 aaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggacgaaaagaggtattta 45970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9267152 - 9266978
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||||| ||||| ||||||||  |||||||||||||||||| | |||||||||| ||    
T  9267152 cctccacttttggtccctcattttacgtacaatgtatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggac 9267053  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  9267052 aaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 9266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 33372607 - 33372779
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||   || ||||||||||||||||| |||||||||| ||    
T  33372607 cctccacttttgatccctcattttacgtgtca-gtatgcagattctgctgacgtggtggaatggg-gatcaaaagtggaagaatctgaaattacagggac 33372704  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||| ||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  33372705 aaaatctaaatcttttttttaacaggaactaaaatcgaaattcgctaatattacggggacgaaaagaggtattta 33372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 14162072 - 14162240
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||| |||||||| | ||    
T  14162072 cctccatttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggac 14162171  T
Q  101 aaaatctannnnnnnnn---acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||            ||||||||||||| |  ||||||||||||||||| |||| |||||||||    
T  14162172 aaaatctaaatctcttttttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggt 14162240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 19112941 - 19112767
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||| |  |||||||||||||||||| | ||||| |||| |||    
T  19112941 ctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggaca 19112842  T
Q  102 aaatcta-----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||              ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  19112841 aaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacatggacgaaaagaggtattta 19112767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38283751 - 38283858
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |  || ||||||||||||||||| |||||| ||| ||    
T  38283751 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggac 38283850  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  38283851 aaaatcta 38283858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 49986729 - 49986835
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  49986729 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaag-ac 49986827  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  49986828 aaaatcta 49986835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 45003697 - 45003804
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||| ||| ||    
T  45003697 cctccacttttgatccctcattttacatgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggac 45003796  T
Q  101 aaaatcta 108  Q
     |||||||    
T  45003797 taaatcta 45003804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47575449 - 47575343
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||| |  ||||||||||| |||||| ||||||||||  |||    
T  47575449 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctgccgtggtggaat-agggaccaaaagtgaaagaatataaaattacataaac 47575351  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  47575350 aaaatcta 47575343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5800806 - 5800913
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| ||||||||||||||||||  || |||||||||| ||| |||||| |||||||||| |  |||||||||||||||||| | |||||||| | ||    
T  5800806 cctccatttttggtccctcattttacatgccatgtatgcaaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaattacaaggac 5800905  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  5800906 aaaatcta 5800913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 9267210 - 9267349
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaat 131  Q
    ||||||||||||| |||| || || || ||  |||||||||| ||||||||| | |||||||| ||||||||||            ||||||||||||||    
T  9267210 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaaaatttatatacagggactaaaat 9267309  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  |||||||||||||||||||||||||||||||| ||||    
T  9267310 cggaattcgctaatattacaaggacgaaaagaggtattta 9267349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 52552923 - 52553055
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||  ||||||||||             |||||||||||||    
T  52552923 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaa 52553022  T
Q  131 tcaaaattcgctaatattacaaggacgaaaaga 163  Q
      | |||||||||||||||||||||||||||||    
T  52553023 ctagaattcgctaatattacaaggacgaaaaga 52553055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 14171822 - 14171961
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaat 131  Q
    ||||||||| |||||||||| || || ||  |||||||||||||||||||  |||||||||| ||||||||||             |||||||||||||     
T  14171822 atgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaac 14171921  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  ||||||||||||||||| |||||||||||||| ||||    
T  14171922 cggaattcgctaatattacagggacgaaaagaggtattta 14171961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 47570045 - 47569987
Alignment:
Q  388 gagatggcttactacaatcaaaacactcctcctgctattaacgttaacgtttctggtccacc 449  Q
    |||||||||||||||||||||||   |||||||||  |||||||||||||||||||||||||    
T  47570045 gagatggcttactacaatcaaaa---tcctcctgcggttaacgttaacgtttctggtccacc 47569987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 14162014 - 14161941
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||| ||| ||||||    
T  14162014 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatcta 14161941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 14262271 - 14262424
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  ||| |||||||||| ||| | |||||||||| ||||||||||             |||||||||||||    
T  14262271 tatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14262370  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctctaacaaat 184  Q
     |  ||||||||||||||||| |||||||||||||| |||| |||  |||||||    
T  14262371 ccggaattcgctaatattacagggacgaaaagaggtatttacccttcaacaaat 14262424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 45970058 - 45969985
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || || |||||||||||| |||||||| |||||||||| ||||||||||    
T  45970058 tatgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatcta 45969985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 47575507 - 47575580
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || || ||||||||||| ||| ||||| |||||||||  ||||||||||    
T  47575507 tatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatcta 47575580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 5800748 - 5800608
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||| ||||||||| | |||||||||| ||| ||||||             |||||||||||||    
T  5800748 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaa 5800649  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     | ||||||| |||||||||| |||||||||||||| ||||    
T  5800648 ccgaaattcgttaatattacagggacgaaaagaggtattta 5800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 27946165 - 27946117
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggt 27946117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 33372548 - 33372476
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||| |||||||||| || || ||  |||||||||||||| ||||| |||||||||| ||||||||||    
T  33372548 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatcta 33372476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 35995913 - 35996042
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn-acagggactaaaatca 133  Q
    |||||||||||||| |||||| || ||  |  |||||||||||||||||||| ||||||| |  ||||| ||||          |||||||||||||||     
T  35995913 tatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattactgagacaaattctaatttttttttacagggactaaaatcg 35996012  T
Q  134 aaattcgctaatattacaaggacgaaaaga 163  Q
     ||||||||||||||||| |||||||||||    
T  35996013 gaattcgctaatattacagggacgaaaaga 35996042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 17465705 - 17465742
Alignment:
Q  134 aaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17465705 aaattcgctaatattacaaggacgaaaagaggtattta 17465742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 20853963 - 20854004
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  20853963 gaccaaaagtggaagaatctgaaattacagggacaaaatcta 20854004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 43572500 - 43572459
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  43572500 gaccaaaagtggaagaatctgaaattacagggacaaaatcta 43572459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 45003635 - 45003566
Alignment:
Q  39 cagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||| ||||||| || || ||  ||| |||||||||||||||| |||||||||| ||||||||||    
T  45003635 cagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatcta 45003566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 27946187 - 27946246
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctct 177  Q
    ||||||||||||| |  ||||||||||||||||  |||||||||||||| |||| |||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccctct 27946246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 19720389 - 19720343
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||||||    
T  19720389 acagggactaaaaccggaattcgctaatattacagggacgaaaagag 19720343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 20854021 - 20854063
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||| | |||||||||||||||||| ||||||||||||    
T  20854021 ggactaaaaccgaaattcgctaatattacatggacgaaaagag 20854063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 21632942 - 21632904
Alignment:
Q  133 aaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  21632942 aaaattcgctaatattacagggacgaaaagaggtattta 21632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 30500276 - 30500415
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    |||| ||||| |||||||||| || || ||  |||||||||||||| ||| | |||||||||| ||||||||||            |||||||||||||     
T  30500276 tatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaac 30500375  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
       ||||||||||||||||| |||||||||||||| ||||    
T  30500376 tggaattcgctaatattacagggacgaaaagaggtattta 30500415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 33372462 - 33372416
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||| ||||||| || ||||||||||||||||| ||||||||||||    
T  33372462 acaggaactaaaaccagaattcgctaatattacagggacgaaaagag 33372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 35740955 - 35740885
Alignment:
Q  38 gcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||| ||| |  | |||  ||| |||||||||||||| |||||||||||| ||||||||||    
T  35740955 gcagattctgctgatgtgttttattgagggactaaaagtggaagaatttaaaattacagggacaaaatcta 35740885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 49986640 - 49986598
Alignment:
Q  66 agaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||    
T  49986640 agaccaaaagtagaagaatctgaaattacagggacaaaatcta 49986598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 11003788 - 11003735
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  |||||| ||||||||||||||| ||||||||| ||||    
T  11003788 acagggactaaaaccggaattcggtaatattacaaggacaaaaagaggtattta 11003735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 11003843 - 11003802
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||| | ||||||||||    
T  11003843 gaccaaaagtggaagaatctgaaattacaaggacaaaatcta 11003802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 15328786 - 15328831
Alignment:
Q  121 gggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||||| ||||||||||||||||||||  || ||||||||||    
T  15328786 gggactaaaaccaaaattcgctaatattacagagatgaaaagaggt 15328831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 16722047 - 16721994
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||| |||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  16722047 acagtgactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 16721994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 16722102 - 16722061
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||| | ||||||||||    
T  16722102 gaccaaaagtggaagaatctgaaattacatggacaaaatcta 16722061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 17649245 - 17649318
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || |  || || |||||||| |||||| ||||| |||||||||| ||||||||||    
T  17649245 tatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatcta 17649318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 19113000 - 19113073
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  |||||||||| ||||||||| |||||||||| | ||||||||    
T  19113000 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatcta 19113073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 20853735 - 20853698
Alignment:
Q  134 aaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  20853735 aaattcgctaatattacagggacgaaaagaggtattta 20853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 21633039 - 21632966
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  ||||||||||| |||||||| |||||||||| |||| |||||    
T  21633039 tatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatcta 21632966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 35995734 - 35995681
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| | |||||||||||| ||||    
T  35995734 acagggactaaaaccggaattcgctaatattacaggaacgaaaagaggtattta 35995681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 36990931 - 36991025
Alignment:
Q  71 aaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaatcaaaattcgctaatattacaaggacgaaaag 162  Q
    ||||||||||||||||||||||||||| ||| ||||||            ||||||||||||| | |||||||||||||||||| |||| |||||    
T  36990931 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggaccaaaag 36991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 37016371 - 37016465
Alignment:
Q  71 aaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaatcaaaattcgctaatattacaaggacgaaaag 162  Q
    ||||||||||||||||||||||||||| ||| ||||||            ||||||||||||| | |||||||||||||||||| |||| |||||    
T  37016371 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggaccaaaag 37016465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 38283693 - 38283620
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||| |||||||||||||||| || || ||  || ||||||||||| ||| | |||||| ||||||||||||||    
T  38283693 tatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatcta 38283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 43572445 - 43572400
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||||||||| | |||||||||||||||||| | |||||||||    
T  43572445 acagggactaaaaccgaaattcgctaatattacaggaacgaaaaga 43572400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 45969971 - 45969918
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||| ||||||||||| |||||||||||||| ||||    
T  45969971 acagggactaaaaccggaattcactaatattacagggacgaaaagaggtattta 45969918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 49986850 - 49986903
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| ||||||| | |||||||||||||||||  |||||||||||||| ||||    
T  49986850 acaggaactaaaaccgaaattcgctaatattactgggacgaaaagaggtattta 49986903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17623064 - 17622893
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  17623064 cctccacttttggtccctcattttacgtgccatgtacgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattaca-gaac 17622966  T
Q  101 aaaatct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||  |         |||||||||||||   ||||||||||||||||||||||||||||||||| ||||    
T  17622965 aaaatctaaatctttttttacagggactaaaactgaaattcgctaatattacaaggacgaaaagaggtattta 17622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 42113160 - 42112993
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||||||| |||||||||| |||    
T  42113160 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggaca 42113061  T
Q  102 aaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
     ||||||            |||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  42113060 taatctaaatcttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 43851841 - 43851668
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||| |||||||||| ||    
T  43851841 cctccacttttgatccctcattttacgtgtcatgtatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggac 43851742  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  43851741 aaaatctaaatcttttgtttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 43851668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21148114 - 21148007
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||| ||    
T  21148114 cctccacttttggtccctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 21148015  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  21148014 aaaatcta 21148007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10108571 - 10108678
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||| ||    
T  10108571 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggac 10108670  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  10108671 aaaatcta 10108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26136886 - 26136993
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||| ||    
T  26136886 cctccatttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  26136986 aaaatcta 26136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7689724 - 7689898
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||||| |||||||||| ||    
T  7689724 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggac 7689823  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| ||             ||| |||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  7689824 aaaatttaaatctttttttttacacggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 7689898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14767684 - 14767577
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |  |||||||||||||| ||||| |||||||||| ||    
T  14767684 cctccacttttggtctctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggac 14767585  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  14767584 aaaatcta 14767577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14820495 - 14820602
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||| ||    
T  14820495 cctctacttttggtccctcattttacgagtcatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggac 14820594  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  14820595 aaaatcta 14820602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22494585 - 22494692
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  22494585 cctccacttttggtccctcattttacgtgtcatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T
Q  101 aaaatcta 108  Q
    ||| ||||    
T  22494685 aaattcta 22494692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26532960 - 26532853
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||| | |||||||||| ||    
T  26532960 cctccacttttaatccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggac 26532861  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  26532860 aaaatcta 26532853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 5555074 - 5555242
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaa 104  Q
    ||||||||||||||||||||| ||| ||| |||||||||| ||||||| ||||||||| |  |||||||||||||||||| | |||||||||| ||||||    
T  5555074 cacttttggtccctcattttacgtgccatttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaa 5555173  T
Q  105 tcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtt 169  Q
    ||||             |||| |||||||| | |||||||||||||||||| |||||||||||||||||    
T  5555174 tctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagaggtgtt 5555242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42605954 - 42606061
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||| ||||| |||||||| |||||||||||| |  |||||||||||||||||| | ||||||| || ||    
T  42605954 cctccacttttggtccctcattttacgtgccatgaatgcaaattctgcttacgtggtggaataatggaccaaaagtggaagaatttgaaattacggggac 42606053  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  42606054 aaaatcta 42606061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2583521 - 2583625
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||| |||||||||||||  || ||||||||||||||| ||||| ||||||||||||   ||||||||||||||||||| |||||| ||| ||    
T  2583521 cctccacttttagtccctcattttacatgccatgtatgcagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaattatagggac 2583620  T
Q  101 aaaat 105  Q
    |||||    
T  2583621 aaaat 2583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30789684 - 30789519
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||| ||| ||| |||||||||||||| |||| |||||||| |||||  || |||||||||| |||||| |||||||||  ||    
T  30789684 cctccacttttgatccctcatcttacgtgccatgtatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagac 30789585  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||||            |||||||||||||||  ||||||||||||||||| |||||||||||    
T  30789584 aaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43481491 - 43481406
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatct 86  Q
    |||||||||||| |||||| ||||| ||| |||||||||| ||||| ||  ||||||||||||| |||||||||||||||||||||    
T  43481491 cctccacttttgatccctcgttttacgtgccatgtatgcaaattctacttgcgtggtggaatgagagaccaaaagtggaagaatct 43481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 10108513 - 10108360
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||             |||||||||||||    
T  10108513 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 10108414  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctctaacaaat 184  Q
     |  ||||||||||||||||| |||||||||||||| |||| ||| ||| ||||    
T  10108413 ccggaattcgctaatattacagggacgaaaagaggtatttaccctttaaaaaat 10108360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 10171383 - 10171451
Alignment:
Q  40 agattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| || ||||||||  ||||||||||| ||||||||||||||||||| ||||||||||    
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatcta 10171451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 30789743 - 30789815
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||| |||||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  30789743 atgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatcta 30789815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 14820437 - 14820298
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    ||||||||||||||||| ||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||            ||||| |||||||     
T  14820437 tatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaac 14820338  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  ||||||||||||||||| |||||||||||||| ||||    
T  14820337 cggaattcgctaatattacagggacgaaaagaggtattta 14820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 17623122 - 17623195
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||| | ||||||||||    
T  17623122 tatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatcta 17623195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 2583463 - 2583390
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  || ||||||| ||||||||  |||||||||| ||||||||||    
T  2583463 tatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatcta 2583390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 5554925 - 5554872
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  5554925 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 5554872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 22494527 - 22494455
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| |  || ||  |||||||| ||||||||| | |||||||||||||||||||||    
T  22494527 tatgcagattctgctgacgtgattaaa-gaaggaccaaaaatggaagaatatgaaattacaggaacaaaatcta 22494455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 5555012 - 5554940
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct 107  Q
    ||||||||||||||||||||| || ||  |  |||||||||||||||||| | |||||| ||| |||||||||    
T  5555012 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatct 5554940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 43481549 - 43481619
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    |||||||||| |||||||||| |  || || ||||||| ||||||||||| | |||||||||| |||||||    
T  43481549 tatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggacaaaat 43481619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 44162810 - 44162736
Alignment:
Q  31 catgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    |||||| ||||| | ||||||| || |  ||||| ||||||||||| ||||||||| |||| |||||||||||||    
T  44162810 catgtaggcagaatttgctgacatgttcaaatgagagaccaaaagtagaagaatctgaaatgacaggaacaaaat 44162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 7689564 - 7689527
Alignment:
Q  134 aaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  7689564 aaattcgctaatattacagggacgaaaagaggtattta 7689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 10171465 - 10171518
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||||||||| ||| ||||    
T  10171465 acagggactaaaaccggaattcgctaatattacagggacgaaaagcggtattta 10171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 14767559 - 14767514
Alignment:
Q  121 gggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||||| ||||||||||||||||||||  || ||||||||||    
T  14767559 gggactaaaaccaaaattcgctaatattacagagatgaaaagaggt 14767514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 18044153 - 18044202
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 18044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 21144740 - 21144813
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||||||  ||| |  ||| |||| |||| |||||| |||||||| | ||||||||||    
T  21144740 tatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatcta 21144813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 21148171 - 21148244
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||| || || || ||  ||| |||||||||||||| | |||||||| | ||||||||||    
T  21148171 tatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatcta 21148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 10108692 - 10108740
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |  |||| |||||||||||| ||||||||||||||    
T  10108692 acagggactaaaaccggaatttgctaatattacagggacgaaaagaggt 10108740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 14820616 - 14820664
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |  ||||||||||||||||| |||| |||||||||    
T  14820616 acagggactaaaaccggaattcgctaatattacagggactaaaagaggt 14820664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 21147992 - 21147944
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |  ||||||||||||||||| |||| |||||||||    
T  21147992 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggt 21147944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18500491 - 18500318
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  18500491 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 18500392  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            ||||||||||||| | |||||||||||||||| | |||||||||||||| ||||    
T  18500391 aaaatctaaatctttttcttacagggactaaaaccgaaattcgctaatattatagggacgaaaagaggtattta 18500318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30618162 - 30618269
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||    
T  30618162 cctccacttttggtccctcattttacgtgccatgtatgtagattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggac 30618261  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  30618262 aaaatcta 30618269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32017713 - 32017608
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||  |||    
T  32017713 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaattaca--aac 32017616  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  32017615 aaaatcta 32017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26385455 - 26385348
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||| ||    
T  26385455 cctccacttttggtccctcattttacgtgccatgtatacagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggac 26385356  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  26385355 aaaatcta 26385348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24732139 - 24732246
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  24732139 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggac 24732238  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  24732239 aaaatcta 24732246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33714664 - 33714557
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  33714664 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggac 33714565  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  33714564 aaaatcta 33714557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 33637732 - 33637831
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  || |||||||| |||||| | |||||||||| |||||    
T  33637732 ccacttttggtccctcattttacgtgttatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaagaatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 30459074 - 30458983
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacag 96  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||| |||||||||    
T  30459074 cacttttgatctctcattttacgtgtcatgtatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacag 30458983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 14681058 - 14680952
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| | ||||||||   |||    
T  14681058 ctccacttttggtctctcttttcacgtgtcatgtatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagaca 14680959  T
Q  102 aaatcta 108  Q
    |||||||    
T  14680958 aaatcta 14680952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9481383 - 9481490
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||| ||||||||||||  ||| |||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||| |||||||| | ||    
T  9481383 cctccattttttgtccctcattttgcgtgccatgtatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggac 9481482  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  9481483 aaaatcta 9481490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 2299484 - 2299392
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    |||||||||||||||||||||| ||| ||||||| || |||||||| ||||||||||||||  ||| |||||||||||||| | ||||||||||    
T  2299484 ccacttttggtccctcattttacgtgccatgtatacatattctgcttacgtggtggaatgagggactaaaagtggaagaat-tgaaattacagg 2299392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 9854118 - 9854195
Alignment:
Q  31 catgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||| ||||||||||||| |||||  |||||||||||||||||| | |||||||| | ||||||||||    
T  9854118 catgtatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatcta 9854195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 33637702 - 33637629
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||  || || ||  ||||||||||||||||||||||||||||| ||||||||||||    
T  33637702 tatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatcta 33637629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3230040 - 3229992
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgct 49  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3230040 cctccacttttggtccctcattttatgtttcatgtatgcagattctgct 3229992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 30618105 - 30617970
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnnacagggactaaaatcaa 134  Q
    ||||||||||||||||||||| |  || ||  |||||||||||||| ||| | |||||||||| ||||||||||         | ||| ||||||||||     
T  30618105 tatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatttttttaaagg-actaaaatcag 30618007  T
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| ||||||||||| |||||||||||||| ||||    
T  30618006 aattcactaatattacagggacgaaaagaggtattta 30617970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 26385596 - 26385651
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatc 173  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||    
T  26385596 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttatc 26385651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 10321893 - 10321811
Alignment:
Q  15 ccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    |||| |||||| ||| ||||||||||||| |||||||||||||| |||||  || |||||||| |||||| | ||||||||||    
T  10321893 cccttattttacgtgccatgtatgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacagg 10321811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 9481325 - 9481185
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||| ||||||||| | |||||||||| ||| ||||||             |||||||||||||    
T  9481325 tatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaa 9481226  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     |  ||||||||||||||||| |||||||||||||| ||||    
T  9481225 ccggaattcgctaatattacagggacgaaaagaggtattta 9481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 32017739 - 32017871
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    |||||| |||| ||||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||            |||||||||||||     
T  32017739 tatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaac 32017838  T
Q  132 caaaattcgctaatattacaaggacgaaaagag 164  Q
    |  ||||||||||||||||| ||||||||||||    
T  32017839 cggaattcgctaatattacagggacgaaaagag 32017871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 10321966 - 10322028
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    ||||||||||||||||||||| || || ||  ||||||||||| |||||||| ||||||||||    
T  10321966 tatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagg 10322028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 18500655 - 18500704
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| ||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattta 18500704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 19284240 - 19284199
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  19284240 gaccaaaagtggaagaatctgaaattacagggacaaaatcta 19284199  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 24731991 - 24731938
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  24731991 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 24731938  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 34884613 - 34884567
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||| ||||| | |||||| ||||||||||||||||||||||||    
T  34884613 acagggattaaaaccgaaattcactaatattacaaggacgaaaagag 34884567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 2299580 - 2299617
Alignment:
Q  71 aaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  2299580 aaaagtggaagaatctgaaattacagggacaaaatcta 2299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 26385330 - 26385281
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| ||||    
T  26385330 ggactaaaaccagaattcgctaatattacagagacgaaaagaggtattta 26385281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 9154990 - 9154950
Alignment:
Q  68 accaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||| ||||||||||| |||||||||| ||||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatcta 9154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 10321788 - 10321744
Alignment:
Q  119 cagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    |||||||||||| |  ||||||||||||||||| |||||||||||    
T  10321788 cagggactaaaaccggaattcgctaatattacagggacgaaaaga 10321744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 24732276 - 24732312
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  24732276 aattcgctaatattacagggacgaaaagaggtattta 24732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30299432 - 30299539
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||| ||    
T  30299432 cctccacttttggtccctcattttatgtgccatgtatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggac 30299531  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  30299532 aaaatcta 30299539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 39826227 - 39826053
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||  || ||||||||||||||||| |||||||||| ||    
T  39826227 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggac 39826128  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  39826127 aaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatattatatggacgaaaagaggtattta 39826053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39711273 - 39711447
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||  |||||||||||||||||| | ||||||| || ||    
T  39711273 cctccacttttggtccctcattttacgtgccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggac 39711372  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  39711373 aaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacagggacgaaaagaggtattta 39711447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 17606509 - 17606676
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||| |||||||| | ||    
T  17606509 cctccacttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggac 17606608  T
Q  101 aaaatct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||  |         ||||||||||||| |  ||||||||||||||||| ||||||||||||||    
T  17606609 aaaatctaaatctttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggt 17606676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 52058187 - 52058092
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||    
T  52058187 ctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagg 52058092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 39970821 - 39970716
Alignment:
Q  3 tccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaa 102  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||   ||||    
T  39970821 tccacttttggtccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaa 39970722  T
Q  103 aatcta 108  Q
    ||||||    
T  39970721 aatcta 39970716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 4907137 - 4907032
Alignment:
Q  3 tccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaa 102  Q
    ||||||||| |||||||||||||  || ||||||||||||||| ||||||||||||||||||  |||||||||||||||||| | |||||||||| ||||    
T  4907137 tccacttttagtccctcattttacatgccatgtatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaa 4907038  T
Q  103 aatcta 108  Q
    ||||||    
T  4907037 aatcta 4907032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34749314 - 34749149
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||||||||||||  || |||||||||| |||||||| ||||||||||||||  |||||||||||||||||| | ||||||| || ||    
T  34749314 cctccacttttggtccctcattttacatgccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggac 34749215  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||||            | |||||||||||||| ||||||||||||||||| ||| |||||||    
T  34749214 aaaatctaaatcttttttttatagggactaaaatcagaattcgctaatattacagggatgaaaaga 34749149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42510191 - 42510084
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||| |||||  ||| |||||||||||||| | |||||||||| ||    
T  42510191 cctccacttttggtccctcatttcacgtgccatgtatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggac 42510092  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  42510091 aaaatcta 42510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48072162 - 48072269
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||    |||||||||||||||| | |||||||||| ||    
T  48072162 cctccacttttggtccctcattttacgtgacatgtatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggac 48072261  T
Q  101 aaaatcta 108  Q
    | ||||||    
T  48072262 ataatcta 48072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13229932 - 13230014
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaa 83  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  13229932 cctccacttttggtccctcattttgcgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaa 13230014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 20995871 - 20996037
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||  |||    
T  20995871 ctccacttttggtccctcattt-acgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagaca 20995969  T
Q  102 aaatctannnnnnnnn---acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||            ||| |||||||||  ||||||||||||||||||| |||| |||||||||    
T  20995970 aaatctaaatcttttttttacatggactaaaactaaaattcgctaatattacagggacaaaaagaggt 20996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 24467830 - 24467935
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||| |||||||| |||||||| ||| |||||||||||||||| ||||||||||| |||||  |||||||||||||||||||| |||||||||| |||    
T  24467830 ctccacatttggtcc-tcattttacgtgccatgtatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 24467928  T
Q  102 aaatcta 108  Q
    |||||||    
T  24467929 aaatcta 24467935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33628867 - 33628693
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||| |||||||||||||||||||| ||| |||||||||| |||||||| | ||||||||||||  ||||||||||| |||||||| ||||||| || ||    
T  33628867 cctctacttttggtccctcattttacgtgccatgtatgcaaattctgcttatgtggtggaatgagggaccaaaagtgaaagaatctgaaattacggggac 33628768  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             || |||||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  33628767 aaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacagggacgaaaagaggtattta 33628693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43539548 - 43539653
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |  |||||||| ||||||||| | |||||||| | ||    
T  43539548 cctccacttttggtacctcattttacgtgtcatgtatgcagattcggctgacgtggtggaataagggaccaaaactggaagaatttgaaattacatggac 43539647  T
Q  101 aaaatc 106  Q
    ||||||    
T  43539648 aaaatc 43539653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 18462487 - 18462592
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||| || |||    
T  18462487 ctccacgtttggtcc-tcattttgcgtgccatgtatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggaca 18462585  T
Q  102 aaatcta 108  Q
    |||||||    
T  18462586 aaatcta 18462592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29696764 - 29696866
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| |||      |||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||| | ||    
T  29696764 cctccacttttggtccctcattttacgtgc-----atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggac 29696858  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  29696859 aaaatcta 29696866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 8293020 - 8293115
Alignment:
Q  13 gtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||   || ||||||||||||||| |||||| |||||||||||  |||||||||||||||||| | |||||||||| ||||||||||    
T  8293020 gtccctcatttttcatgccatgtatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 8293115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 17606447 - 17606303
Alignment:
Q  39 cagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta--------nnnnnnnnnacagggactaaaa 130  Q
    ||||||||||||||||| || |||||  |||||||||||||||||| | |||||||||||||||||||||                 |||||||||||||    
T  17606447 cagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctttttttttttttacagggactaaaa 17606348  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgtttatcct 175  Q
    ||  ||||||||||||||||| |||||||||||||| ||||||||    
T  17606347 tcggaattcgctaatattacagggacgaaaagaggtatttatcct 17606303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7473969 - 7473874
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacag 96  Q
    |||||||||||| ||| |||||| | ||| ||||||||||||||||  |||||||||| |||||  |||||||||||||||||| | |||||||||    
T  7473969 cctccacttttgatccatcatttcacgtgccatgtatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacag 7473874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 4907197 - 4907270
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||| |||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  4907197 tatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 4907270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 43539490 - 43539417
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||| ||| |||||||||||| ||||||||||    
T  43539490 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatcta 43539417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 39826313 - 39826421
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnna----cagggactaaaatcaaaattcgctaatattacaaggacgaaaag 162  Q
    |||||||||||||||||||| |||||||||| ||||||||||         |    |||||||||||| | |||||||||||||||||| ||||||||||    
T  39826313 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaag 39826412  T
Q  163 aggtgttta 171  Q
    |||| ||||    
T  39826413 aggtattta 39826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 39970880 - 39971021
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta-----nnnnnnnnnacagggactaaa 129  Q
    ||||| ||||||||||||||| || ||  |  ||||||||||||||| ||||||||||||||| ||||||||||              ||||||||||||    
T  39970880 tatgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttttttacagggactaaa 39970979  T
Q  130 atcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | | ||||||| |||||||||| |||||||||||||| ||||    
T  39970980 accgaaattcgttaatattacatggacgaaaagaggtattta 39971021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 18342261 - 18342392
Alignment:
Q  42 attctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn--acagggactaaaatcaaaattc 139  Q
    |||||||| ||||||||||||||  ||| |||||||||||||| | |||||||| ||| ||||| ||           ||||||||||||| | ||||||    
T  18342261 attctgcttacgtggtggaatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaatttttttttacagggactaaaaccgaaattc 18342360  T
Q  140 gctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||| ||||||||| |||| ||||    
T  18342361 gctaatattacagggacgaaaaaaggtattta 18342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 52058330 - 52058383
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  52058330 acaggaactaaaaccaaaattcgctaatattacagggacgaaaagaggtattta 52058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 33628925 - 33628996
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatc 106  Q
    |||| |||||||||||||||| |  || ||  |||||||||||||||||||| |||||||||| ||||||||    
T  33628925 tatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 33628996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 18462396 - 18462289
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    |||||||| ||||||||||| |||||||||| ||||||||||            ||||||||||||| |  ||||||||||||||||| |||||||||||    
T  18462396 gaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 18462297  T
Q  164 ggtgttta 171  Q
    ||| ||||    
T  18462296 ggtattta 18462289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 24467739 - 24467640
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    |||||||||||||||||||| |||||||||| ||||||||||            ||||||||||||||   ||||||||||||||||| |||||||||||    
T  24467739 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaattggaattcgctaatattacagggacgaaaaga 24467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 39711215 - 39711077
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    ||||||||||||||||||||| |  || ||  |||||||||||||||||| | |||||||| | ||||||||||            |||||||||||||     
T  39711215 tatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaac 39711116  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  |||||||||||||||||| ||||||||||||| ||||    
T  39711115 cggaattcgctaatattacaa-gacgaaaagaggtattta 39711077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 8292947 - 8292874
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||   ||||||||||||||||| | ||||| |||| ||||||||||    
T  8292947 tatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatcta 8292874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 29696621 - 29696568
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||| |||||||| | |||||||||||||||||| |||||||||||||| ||||    
T  29696621 acagagactaaaaccgaaattcgctaatattacagggacgaaaagaggtattta 29696568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 30299284 - 30299235
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||| || ||||||||||||||| |||||||||||||| ||||    
T  30299284 ggactaaaatcgaagttcgctaatattacagggacgaaaagaggtattta 30299235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 30299374 - 30299301
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||| |||||||| |||| || || || || ||||||||||||||||||| | |||||||||| ||||||||||    
T  30299374 tatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatcta 30299301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 34749340 - 34749413
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| |  || ||   ||||||||||||||||||| |||||||||| | ||||||||    
T  34749340 tatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatcta 34749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 20995812 - 20995750
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    ||||||||||||||||||||| || ||  |  ||||||||||| |||||| ||||||||||||    
T  20995812 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataaaattacagg 20995750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 4907018 - 4906965
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||  | ||||| ||||||||||| |||||||||||||| ||||    
T  4907018 acagggactaaaactagaattcactaatattacagggacgaaaagaggtattta 4906965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 52058275 - 52058316
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||||| ||| ||||||    
T  52058275 gaccaaaagtggaagaatctgaaattacagggacataatcta 52058316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 33629012 - 33629060
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |  ||||||||||||||||| |||| |||||||||    
T  33629012 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggt 33629060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 52058050 - 52058014
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  52058050 aattcgttaatattacaaggacgaaaagaggtattta 52058014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 15106268 - 15106440
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||||  || ||||||||||||||||| |||||||||| ||    
T  15106268 cctccacttttgatccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggac 15106367  T
Q  101 aaaatct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||  |         ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  15106368 aaaatctaaatttttttttacagggactaaaatcgaaattcgctaatattacggggacgaaaagaggtattta 15106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 26560731 - 26560566
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||| ||    
T  26560731 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 26560632  T
Q  101 aaaatct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
     ||||||  |         ||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  26560631 taaatctaaatctttttttacagggactaaaatcgaaattcgttaatattacagggacgaaaagag 26560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26236296 - 26236474
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||| ||||||||||| |||||||||| ||    
T  26236296 cctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggac 26236395  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctc 176  Q
    ||||||||             || ||||||||| | |||||||||||||||||| |||||||||||||| |||| ||||    
T  26236396 aaaatctaaatcttttttttccaaggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccctc 26236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22263368 - 22263261
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||| ||    
T  22263368 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggac 22263269  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  22263268 aaaatcta 22263261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23806153 - 23806327
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  23806153 cctccacttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 23806252  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||| | |||||||||||||||||| |||| ||||||||| ||||    
T  23806253 aaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacaaaaagaggtattta 23806327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17850763 - 17850590
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||  || ||||||||||||||||| |||||||||  ||    
T  17850763 cctccacttttgatccctcattttaggtaccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagac 17850664  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            | |||||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  17850663 aaaatctaaatcttttttttatagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 17850590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19251671 - 19251844
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||  |||| ||||||||||||| | |||||||| | ||    
T  19251671 cctccacttttggtccatcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggac 19251770  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | ||||||            ||||||||||||| |  ||||| |||||||||||||||||||||||||| ||||    
T  19251771 agaatctaaatcttttttttacagggactaaaaccggaattcactaatattacaaggacgaaaagaggtattta 19251844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 20498947 - 20499053
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    ||||||||||| |||||||||||| |||  |||||||||||||||||||| |||||| |||||  ||||||||||| |||||||| |||||||||| |||    
T  20498947 ctccacttttgatccctcattttacgtgctatgtatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggaca 20499046  T
Q  102 aaatcta 108  Q
    |||||||    
T  20499047 aaatcta 20499053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 13254638 - 13254734
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagga 98  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||| | |||||| |||||  |||||||||||||||||||| |||||||||||    
T  13254638 ctccacttttggtccctcattttacgtgtcatgtatactgattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagga 13254734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 30390629 - 30390529
Alignment:
Q  8 ttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct 107  Q
    |||||||||||||||||| |||  ||||||||||||| |||| ||||||||||||||  |||||||||||||||||| | |||||||||| |||||||||    
T  30390629 ttttggtccctcattttacgtgctatgtatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatct 30390530  T
Q  108 a 108  Q
    |    
T  30390529 a 30390529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 39878304 - 39878399
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacagg 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||  ||||||||||| || ||||| ||||||||||    
T  39878304 ctccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagg 39878399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42670896 - 42670789
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||| ||||||||||||||||| |  |||||||||||||||||| | |||||||| | ||    
T  42670896 cctccatttttggtccctcattttacgtgccatgtaagcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggac 42670797  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  42670796 aaaatcta 42670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13284581 - 13284484
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaa 102  Q
    ||||||||||||||||||| | ||||||||||||||||||||| || ||||||| |||||  ||| |||||||||||||| | |||||||||| ||||    
T  13284581 cacttttggtccctcatttcacgtgtcatgtatgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaa 13284484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 17463299 - 17463399
Alignment:
Q  8 ttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct 107  Q
    ||||||||||||||||||  || ||||||||||||||||||| || |||||||||||  || ||||||||||||||| |  ||||||||| |||||||||    
T  17463299 ttttggtccctcattttacatgccatgtatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatct 17463398  T
Q  108 a 108  Q
    |    
T  17463399 a 17463399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26136018 - 26136125
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||||| |||||| ||  ||||||||||||||||||| ||||| ||||| || ||| ||||||||||||||| | ||||||||   ||    
T  26136018 cctccacttttggtcccttattttacgtaccatgtatgcagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaattacaatgac 26136117  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  26136118 aaaatcta 26136125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33290250 - 33290357
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||| ||| | |||||||||||||| |  |||||||||| ||| |  |||||||||||||||||| | |||||||| |  |    
T  33290250 cctccacttttggtccctcatttcatgagccatgtatgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattacaaggtc 33290349  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  33290350 aaaatcta 33290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 17850822 - 17850961
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaat 131  Q
    ||||||||| |||||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||             |||| ||||||||     
T  17850822 atgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaac 17850921  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | |||||||||||||||||| |||||||||||||| ||||    
T  17850922 cgaaattcgctaatattacagggacgaaaagaggtattta 17850961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 26560789 - 26560930
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn-----acagggactaaa 129  Q
    ||||||||||||||||||||| || || || ||||||||||||||||||| | |||||| | | ||||||||||              || |||||||||    
T  26560789 tatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatctaatttttttttttttaccgggactaaa 26560888  T
Q  130 atcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  26560889 atcggaattcgctaatattacaaggacgaaaagaggtattta 26560930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 23806095 - 23806022
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||| ||||||||||||||| || || ||  |||||||||||||||||||||||||||||||  |||||||||    
T  23806095 tatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 23854901 - 23854974
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| |||||||||||  ||||||||||    
T  23854901 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatcta 23854974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 26236270 - 26236137
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    |||||| |||||||||||||| || || ||  ||||||||||| |||||||| |||||||||| ||||||| ||             |||||||||||||    
T  26236270 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaa 26236171  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagag 164  Q
     || ||||||||||||||||||||||||||||||    
T  26236170 ccagaattcgctaatattacaaggacgaaaagag 26236137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 19251606 - 19251479
Alignment:
Q  42 attctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaatcaaaatt 138  Q
    |||||||||| ||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||            ||||||||||||| | |||||    
T  19251606 attctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaatt 19251507  T
Q  139 cgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| ||||||||||||||    
T  19251506 cgctaatattacagggacgaaaagaggt 19251479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23854843 - 23854798
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattct 46  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23854843 cctccacttttggtccctcattttacgtgccatgtatgcagattct 23854798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 15106209 - 15106137
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||  ||||||||| || || ||  |||||||||||||| |||||||||||||||| ||||||||||    
T  15106209 atgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatcta 15106137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 22263426 - 22263498
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct 107  Q
    |||||||||| |||||||||| || || ||  |||||||||||||||||| | |||||||||| |||||||||    
T  22263426 tatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 22263498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 23854744 - 23854696
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  23854744 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggt 23854696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 26135960 - 26135828
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||| |||| || || || ||  |||||||||| ||||||||| |||||||||| ||||||||||             |||||||||||||    
T  26135960 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 26135861  T
Q  131 tcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||  ||||||||||||||||| |||||||||||    
T  26135860 tcggaattcgctaatattacagggacgaaaaga 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 13284643 - 13284716
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||| |||||||| |||||||||  |||||  ||||||||||||| |||||| |||||||| | ||||||||||    
T  13284643 tatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 17463234 - 17463161
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || |||||  |||||||||||| |||| || |||||||||| ||||||||||    
T  17463234 tatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatcta 17463161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 26136143 - 26136192
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||| ||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtattta 26136192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 34548630 - 34548585
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||    
T  34548630 acagggactaaaaccaaaattcactaatattacagggacgaaaaga 34548585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 42670954 - 42671027
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||| ||| | |||||||||| ||| ||||||    
T  42670954 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatcta 42671027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 30390515 - 30390469
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||| |||||||  ||||||||||||||||| ||||||||||||    
T  30390515 acagggattaaaatcggaattcgctaatattacatggacgaaaagag 30390469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 13254553 - 13254500
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||| ||||| |||||||||||||||||||| | ||| |||||||| ||||    
T  13254553 acagggagtaaaaccaaaattcgctaatattacaggaacggaaagaggtattta 13254500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 17463413 - 17463466
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| || ||||||||||| ||||    
T  17463413 acagggactaaaaccggaattcgctaatattacaggggcgaaaagaggtattta 17463466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 20498803 - 20498750
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  |||||||||||||||||  ||||||||||||| ||||    
T  20498803 acagggactaaaaccgtaattcgctaatattacatagacgaaaagaggtattta 20498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 21482151 - 21482188
Alignment:
Q  71 aaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  21482151 aaaagtggaagaatctaaaatgacagggacaaaatcta 21482188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 39878245 - 39878184
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacag 96  Q
    |||||||||| ||||||| || || || ||  |||||||||||||||||||| |||||||||    
T  39878245 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacag 39878184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 44999435 - 44999487
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcct 175  Q
    |||||||||||| |||||||||||||||| | ||||||||||||| || |||||    
T  44999435 ggactaaaatcagaattcgctaatattac-atgacgaaaagaggtattcatcct 44999487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 13254758 - 13254814
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcc 174  Q
    |||| |||||||| |  ||||||||||||||||| |||||||||||| | |||||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaagagatatttatcc 13254814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 13284735 - 13284779
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaag 162  Q
    ||||||||||||| | |||||||||||||||||| |||| |||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 13284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 23046746 - 23046710
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  23046746 aattcgctcatattacaaggacgaaaagaggtattta 23046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 23855033 - 23855069
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  23855033 aattcgctaatattacagggacgaaaagaggtattta 23855069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 30958740 - 30958696
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaag 162  Q
    ||||||||||||| | |||||||||||||||||| |||| |||||    
T  30958740 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 30958696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 39878158 - 39878099
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctcta 178  Q
    ||||||||||||| |  |||||||||||||||||||||| |||| |||| |||| ||||||    
T  39878158 acagggactaaaaccggaattcgctaatattacaaggac-aaaaaaggtatttaccctcta 39878099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 42670773 - 42670725
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |  ||||||||| ||||||| ||||||||||||||    
T  42670773 acagggactaaaaccggaattcgctactattacagggacgaaaagaggt 42670725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 37012884 - 37012715
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||| ||    
T  37012884 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 37012785  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||             ||| ||||| |||| | ||||||||||||||||||||||||||||||||    
T  37012784 aaaatctaaatctttttttttacaaggactgaaattagaattcgctaatattacaaggacgaaaagaggt 37012715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7819215 - 7819322
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||||||| ||    
T  7819215 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggac 7819314  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  7819315 aaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9396900 - 9397007
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | |||||||||||||||||| |||||||||| ||    
T  9396900 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggac 9396999  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  9397000 aaaatcta 9397007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38574145 - 38573967
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  38574145 cctccacttttggtccctcattttacatgccatgtatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 38574046  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcctc 176  Q
    ||||||||            ||||||| |||||||  ||||| ||||||||||| |||||||||||||| |||| ||||    
T  38574045 aaaatctaaatcttttttttacagggattaaaatcggaattcactaatattacatggacgaaaagaggtatttaccctc 38573967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 46046601 - 46046433
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||| || ||||||||||||||  || ||||||||||||||| | |||||||||| ||    
T  46046601 cctccacttttgatccctcattttacgtgccatgtatgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggac 46046502  T
Q  101 aaaatctannnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||         |||||||||||||||  ||||||||||||||||| ||||||||| |||| ||||    
T  46046501 aaaatcta--tttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaaaggtattta 46046433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4356082 - 4356187
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| | |||||||||  ||    
T  4356082 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagac 4356181  T
Q  101 aaaatc 106  Q
    ||||||    
T  4356182 aaaatc 4356187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9516787 - 9516680
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  9516787 cctccacttttggtccctcattttacgtatcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggac 9516688  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  9516687 aaaatcta 9516680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 35376332 - 35376433
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||  |||||||||||||||| ||| |||||||||| |||||    
T  35376332 ccacttttggtccctcattttacgtgtcatgtatacagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaa 35376431  T
Q  104 at 105  Q
    ||    
T  35376432 at 35376433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48259952 - 48260118
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||||||||| |||||||||| ||||||||  || ||||||||||||||| | |||||||||| ||    
T  48259952 cctccacttttgatccctcattttacgtgccatgtatgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggac 48260051  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||            |||| || |||||||||||||||||||||||||| ||||||||||||    
T  48260052 aaaatctaaatcttttttttacagagattaaaatcaaaattcgctaatattacagggacgaaaagag 48260118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 13132117 - 13131943
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||  || ||||||||||||||||| |||||||| |||||    
T  13132117 ctccacttttagcccctcattttacgtgtcatgtatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaaca 13132018  T
Q  102 aaatcta-----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     ||||||              |||||||||||||   ||||||| ||||||||||||||||||||||||| ||||    
T  13132017 taatctaaatcttttttttttacagggactaaaacagaaattcgttaatattacaaggacgaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15640916 - 15641023
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||   ||||||||||||||||||| |||||||||| ||    
T  15640916 cctccacttttggtccatcattttacgtgtcatgtatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggac 15641015  T
Q  101 aaaatcta 108  Q
    | ||||||    
T  15641016 ataatcta 15641023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3018213 - 3018307
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattaca 95  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |  |||||||||||| ||||||| ||||||||    
T  3018213 cctccacttttggtccctcattttacgtgtcatgtatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattaca 3018307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31944151 - 31944317
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||||| | |||||||| | ||    
T  31944151 cctccacttttggtccctcattttacgtgccaagtatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggac 31944250  T
Q  101 aaaatc----tannnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||    ||         |||| |||||||| | ||||||||||||||||||||||||||||||    
T  31944251 aaaatctaattatttttttttacagagactaaaaccgaaattcgctaatattacaaggacgaaaaga 31944317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 26252441 - 26252545
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||   |||||||||||||||||| | |||||||||| |||||    
T  26252441 ccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaattacagggacaaa 26252540  T
Q  104 atcta 108  Q
    |||||    
T  26252541 atcta 26252545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31090238 - 31090131
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||| |||||||| ||  |||||||||| |||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  31090238 cctccacttttggtccttcattttacgtaccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 31090139  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  31090138 aaaatcta 31090131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18667490 - 18667596
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |  ||| |||| ||||||||||| ||||||||||  |    
T  18667490 cctccacttttggtccctcattttacgtgccatgtatgcagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacagggtc 18667589  T
Q  101 aaaatct 107  Q
    |||||||    
T  18667590 aaaatct 18667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34064159 - 34064052
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||| |||||||||||||  || |||||||| |||||| ||||| ||||||||||||  |||||||||||||||||||| |||||||||  ||    
T  34064159 cctccacttttagtccctcattttacatgccatgtatgtagattcggctgatgtggtggaatgagggaccaaaagtggaagaatctgaaattacagagac 34064060  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  34064059 aaaatcta 34064052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48580043 - 48579936
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||| |  |||||||| || |||||||| |||||||||  ||    
T  48580043 cctccacttttgctccctcattttacgtgccatgtatgtagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagac 48579944  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  48579943 aaaatcta 48579936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9619180 - 9619354
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||| ||||| ||| || |||| ||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  9619180 cctccacttttgctccctctttttacgtgccaggtatacagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggac 9619279  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||| || ||||||||||||||||| |||| ||||||||| ||||    
T  9619280 aaaatctaaatctttttttctacagggactaaaaccagaattcgctaatattacagggacaaaaagaggtattta 9619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 3273823 - 3273928
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||| |||||||| |||||||| ||| |||||||||||||||| ||||||||||| |||||  || ||||||||||||||||| |||||||||| | |    
T  3273823 ctccacgtttggtcc-tcattttacgtgccatgtatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggata 3273921  T
Q  102 aaatcta 108  Q
    |||||||    
T  3273922 aaatcta 3273928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18713161 - 18713268
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||| ||||||||||||||| |||| ||   ||||||| ||||||||||||||||||||||| |  |||||||| ||||||||||| |||||||||  ||    
T  18713161 cctcaacttttggtccctcagtttacgttcaatgtatgtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagac 18713260  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  18713261 aaaatcta 18713268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 35376305 - 35376166
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    ||||| ||||||||||||||| || || || |||||||||||||||||||||||||||||||  ||||||||||            |||||||||||||     
T  35376305 tatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaac 35376206  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    || ||||||||||||||||| ||||||||| |||| ||||    
T  35376205 cagaattcgctaatattacagggacgaaaataggtattta 35376166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 9396842 - 9396699
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||||||||| ||| | |||||| ||| ||||||||||             |||| ||||||||    
T  9396842 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaa 9396743  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgtttatcc 174  Q
    || |||||||||||||||||| |||||||||||||| |||||||    
T  9396742 tcgaaattcgctaatattacagggacgaaaagaggtatttatcc 9396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 12904873 - 12904757
Alignment:
Q  51 acgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatat 147  Q
    |||||||||||||| ||||||||||||||||||||| |||||| | | ||||||||||            ||||||||||||| ||||||||||||||||    
T  12904873 acgtggtggaatgagagaccaaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatat 12904774  T
Q  148 tacaaggacgaaaagag 164  Q
    || | ||||||||||||    
T  12904773 tatagggacgaaaagag 12904757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 37012942 - 37013081
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    |||||||||| |||||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||            |||||||||||||     
T  37012942 tatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttatacagggactaaaac 37013041  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    || ||||||||||||||||| |||||||| ||||| ||||    
T  37013042 cagaattcgctaatattacagggacgaaatgaggtattta 37013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 3018155 - 3018082
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||    
T  3018155 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 3018082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 38574204 - 38574347
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnna----cagggactaaaat 131  Q
    ||||||||| || ||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||         |    ||||||||||||     
T  38574204 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 38574303  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgtttatcct 175  Q
    || ||||||||||||||||| ||||||||| |||| ||||||||    
T  38574304 cagaattcgctaatattacagggacgaaaaaaggtatttatcct 38574347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 31090383 - 31090429
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  31090383 acagggactaaaatcgaaattcgctaatattacagggacgaaaagag 31090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 9619123 - 9619050
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  9619123 tatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 9619050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 26252411 - 26252338
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  26252411 tatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 26252338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 34064217 - 34064290
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || ||  |  |||||||||||||||||||| |||||||||  ||||||||||    
T  34064217 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatcta 34064290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 36887736 - 36887688
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggt 36887688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 46046660 - 46046732
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||| |||||||||| || || ||  || ||||||||||||||||| |||||||||| ||||||||||    
T  46046660 atgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatcta 46046732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 3018064 - 3018011
Alignment:
Q  121 gggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgtttatcc 174  Q
    |||||||||| |  ||||||||||||||||| |||||||||||||| |||||||    
T  3018064 gggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttatcc 3018011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 12904906 - 12904939
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattaca 151  Q
    ||||||||||||||||||||||||||||||||||    
T  12904906 acagggactaaaatcaaaattcgctaatattaca 12904939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 13132265 - 13132314
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||| ||||    
T  13132265 ggactaaaatcgaaattcgctaatattacagggacgaaaataggtattta 13132314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 31218303 - 31218356
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 31218356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 7819124 - 7819084
Alignment:
Q  68 accaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  7819124 accaaaagtggaagaatctgaaattacagggacaaaatcta 7819084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 15640858 - 15640721
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn---acagggactaaaat 131  Q
    |||||| |||||||||| ||| || || ||  ||||||||||| |||||| | |||||||||| ||||||||||            ||||| |||||||     
T  15640858 tatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaac 15640759  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgtt 169  Q
    |  ||||||||||||||||| |||||||||||||||||    
T  15640758 cggaattcgctaatattacagggacgaaaagaggtgtt 15640721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 31944092 - 31944020
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||| || || ||||||| || || || ||||||||||||||||||| | |||||||||| ||||||||||    
T  31944092 atgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatcta 31944020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 3273674 - 3273631
Alignment:
Q  121 gggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||    
T  3273674 gggactaaaatcggaattcgctaatattacagggacgaaaagag 3273631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 3018332 - 3018378
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||| | ||||||| |||||||||| ||||||||||||    
T  3018332 acagggactaaaaccgaaattcgttaatattacagggacgaaaagag 3018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 9516932 - 9516978
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    |||| |||||||| | |||||||||||||||||| ||||||||||||    
T  9516932 acagagactaaaaccgaaattcgctaatattacagggacgaaaagag 9516978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 20069538 - 20069608
Alignment:
Q  38 gcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||| || |  ||||| ||||||||||||||||||||| |||| | ||| ||| ||||||    
T  20069538 gcagattctgctgacatgtttcaatgagagaccaaaagtggaagaatctcaaatgatagggacataatcta 20069608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 41947180 - 41947222
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||| | |||||||||||||||||| ||||||||||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacgaaaagag 41947222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 3273733 - 3273692
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  3273733 gaccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 4356024 - 4355951
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||| ||||| || |||||  ||||||||||| |||||| | ||||||||   ||||||||||    
T  4356024 tatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatcta 4355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 9619036 - 9618983
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||| |||| ||||    
T  9619036 acagggactaaaaccggaattcgctaatattacatggacgaaaataggtattta 9618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 31090116 - 31090071
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||    
T  31090116 acagggactaaaatcgaaattcactaatattacagggacaaaaaga 31090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 34064038 - 34063985
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||  | |||||| |||||||||| |||||||||||||| ||||    
T  34064038 acagggactaaaactagaattcgttaatattacagggacgaaaagaggtattta 34063985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 15641055 - 15641091
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  15641055 aattcactaatattacaaggacgaaaagaggtattta 15641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 41947020 - 41946968
Alignment:
Q  119 cagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||| |  ||||| ||||||||||| |||||||||||||| ||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtattta 41946968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 6e-38; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12006717 - 12006544
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||  || ||||||||||||||||| |||||||||| ||    
T  12006717 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggac 12006618  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            |||||||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  12006617 aaaatctaatttttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 12006544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44817012 - 44816907
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||| ||    
T  44817012 cctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T
Q  101 aaaatc 106  Q
    ||||||    
T  44816912 aaaatc 44816907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23704862 - 23705035
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  23704862 cctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 23704961  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            ||||||||||||| |  |||||||||||||||||  ||||||||||||| ||||    
T  23704962 aaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagagacgaaaagaggtattta 23705035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20458868 - 20458761
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||  ||    
T  20458868 cctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgac 20458769  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  20458768 aaaatcta 20458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10409575 - 10409748
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||  ||    
T  10409575 cctccacttttgatccctcattttacatgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagac 10409674  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            |||||||||||||||  ||||||||||||||||| ||| |||||||||| ||||    
T  10409675 aaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacatggatgaaaagaggtattta 10409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 38879893 - 38879794
Alignment:
Q  9 tttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||||||||||    
T  38879893 tttggtccctcattttatgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 38879794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 20963670 - 20963565
Alignment:
Q  3 tccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaa 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| | |||| |||||||  ||||||||||||||||||||||||||||||| || |    
T  20963670 tccacttttggtccctcattttacgtgccatgtatgcagattctgcttatgtggcggaatgagggaccaaaagtggaagaatctaaaattacagggacta 20963571  T
Q  103 aatcta 108  Q
    ||||||    
T  20963570 aatcta 20963565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25772540 - 25772367
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  || ||||||||||||||| | |||||||| | ||    
T  25772540 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaattacaaggac 25772441  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||            ||||  ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  25772440 aaaatctaaatcttttttttacagaaactaaaatcgaaattcgctaatattacagggacgaaaagaggtattta 25772367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20419713 - 20419606
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||||||| ||||||||| | |||||||||| ||    
T  20419713 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggac 20419614  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  20419613 aaaatcta 20419606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41600135 - 41600028
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||  || |||| |||||||||||| |||||||||| ||    
T  41600135 cctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggac 41600036  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  41600035 aaaatcta 41600028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 33162740 - 33162830
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattaca 95  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||| | ||||||||    
T  33162740 cacttttggtccctcattttatgtgccatgtatgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattaca 33162830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 23383673 - 23383570
Alignment:
Q  5 cacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaa 104  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||| |||| ||||||||| | |||||| ||| ||||||    
T  23383673 cacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaa 23383574  T
Q  105 tcta 108  Q
    ||||    
T  23383573 tcta 23383570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48672456 - 48672361
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacag 96  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||  || ||||||||||||||||| |||||||||    
T  48672456 cctccacttttgatccctcattttacatgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacag 48672361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 31851415 - 31851244
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || || ||| ||||||||||| ||| | ||||||||   |||    
T  31851415 ctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgaca 31851316  T
Q  102 aaatct--annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     |||||  |         ||||| ||||||||| |||||| ||||||||| |||||||||||||||| ||||    
T  31851315 gaatctaaatttttttttacaggaactaaaatcgaaattcactaatattaaaaggacgaaaagaggtattta 31851244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1250383 - 1250291
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaatta 93  Q
    |||||||||||  ||| ||||||||  || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1250383 cctccacttttaatccttcattttacatgacatgtatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaatta 1250291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 28218321 - 28218181
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta-----nnnnnnnnnacagggactaaaa 130  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| ||||||||||              |||||||||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     |  ||||||||||||||||| |||||||||||||| ||||    
T  28218221 ccggaattcgctaatattacagggacgaaaagaggtattta 28218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 48648438 - 48648272
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||| || ||||||||||||||  |||||||| || || ||||| |||||||||| ||    
T  48648438 cctccaattttggtccctccttttacgtgccatgtatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggac 48648339  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||            ||| ||||||||||| ||||||||| |||||||| ||||||||||||    
T  48648338 aaaatctaaatctttttcttacatggactaaaatcgaaattcgctgatattacagggacgaaaagag 48648272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 7658204 - 7658340
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnnacagggactaaaatcaa 134  Q
    |||||||||| |||||||||| || || || ||||||||||||||||||||| |||||||||| |||||||||          |||| |||||||| | |    
T  7658204 tatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatctttttttttttacagagactaaaaccga 7658303  T
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||| |||||||||| |||||||||||||| ||||    
T  7658304 aattcgttaatattacagggacgaaaagaggtattta 7658340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 16995341 - 16995203
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaatc 132  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||| ||||||||||            ||||| ||||||| |    
T  16995341 atgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaacc 16995242  T
Q  133 aaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     ||||||||||||||||||  ||||||||||||| ||||    
T  16995241 gaaattcgctaatattacagagacgaaaagaggtattta 16995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24194992 - 24195104
Alignment:
Q  1 cctccacttttggtccctcattttat-----gtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattaca 95  Q
    ||||||||||||||||||||||| ||     || |||||||||||||||||||| ||||| ||||||||  |||||||||||||||||| | ||||||||    
T  24194992 cctccacttttggtccctcatttcattttacgtatcatgtatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattaca 24195091  T
Q  96 ggaacaaaatcta 108  Q
     | ||||||||||    
T  24195092 aggacaaaatcta 24195104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 12006776 - 12006915
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaat 131  Q
    ||||||||| |||||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||             ||||||||||||||    
T  12006776 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaat 12006875  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  ||||||||||||||||| | |||||||||||| ||||    
T  12006876 cggaattcgctaatattacatgaacgaaaagaggtattta 12006915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 38879959 - 38880032
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| ||||| || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  38879959 tatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 38880032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 41600194 - 41600266
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||| |||||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  41600194 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 41600266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 28218399 - 28218538
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta----nnnnnnnnnacagggactaaaat 131  Q
    ||||||||| || ||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||             |||||||||||||     
T  28218399 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 28218498  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  ||||||||||||||||| |||||||||||||| ||||    
T  28218499 cggaattcgctaatattacagggacgaaaagaggtattta 28218538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 6465997 - 6465924
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||| |||||||| || || ||  |||||||||||||||||||| |||||||| ||||| ||||||    
T  6465997 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatcta 6465924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 24195198 - 24195247
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtattta 24195247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 31851474 - 31851547
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||| |||||||||| ||| || || || ||||||||||||||||||| | |||||||||| ||||||||||    
T  31851474 tatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatcta 31851547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 23383823 - 23383875
Alignment:
Q  119 cagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||    
T  23383823 cagggactaaaatcagaattcactaatattacagggacgaaaagaggtattta 23383875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 48672515 - 48672654
Alignment:
Q  36 atgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnna----cagggactaaaat 131  Q
    ||||||||| |||| ||||| || || ||  |||||||||||||||||||| |||||||||| | ||||||||         |    ||||||||||||     
T  48672515 atgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaac 48672614  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | ||||||||||||||||||  ||||||||||||| ||||    
T  48672615 cgaaattcgctaatattacagagacgaaaagaggtattta 48672654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 7658142 - 7658041
Alignment:
Q  6 acttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    |||||| ||||||||||||| ||| |||| ||||||||| |||||||||| || || ||  ||||||||||| |||||| | |||||||| | ||| |||    
T  7658142 acttttagtccctcattttacgtgacatg-atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataat 7658044  T
Q  106 cta 108  Q
    |||    
T  7658043 cta 7658041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 1250441 - 1250514
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||| |||||||| || || ||  |||||||||||||||||| | |||||| ||| ||||||||||    
T  1250441 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatcta 1250514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 7658025 - 7657972
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||| ||||| | |||||||||||||||||| |||||||||||||| ||||    
T  7658025 acagggattaaaaccgaaattcgctaatattacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 25772566 - 25772639
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  |||||||||| ||||||||| |||||||||| ||||||||||    
T  25772566 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatcta 25772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 48648464 - 48648537
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| ||||||| || || ||  ||||| |||||||||||||||||||||||   ||||||||||    
T  48648464 tatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatcta 48648537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 23704772 - 23704734
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  23704772 gaccaaaagtggaagaatctgaaattacagggacaaaat 23704734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 1250545 - 1250574
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||||||||||||||||||||    
T  1250545 aattcgctaatattacaaggacgaaaagag 1250574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 20419592 - 20419539
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||| | |||||||||||||| ||||    
T  20419592 acagggactaaaaccggaattcgctaatattatagggacgaaaagaggtattta 20419539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 20458958 - 20458999
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||||||  ||||||||||    
T  20458958 gaccaaaagtggaagaatctgaaattacagtgacaaaatcta 20458999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 20963815 - 20963868
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||| ||||||||| ||||    
T  20963815 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattta 20963868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 23383735 - 23383808
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||| |||| || || || ||  ||||||| |||||||||| | |||||||||| ||||||||||    
T  23383735 tatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatcta 23383808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 38879779 - 38879726
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||| ||||||||   ||||||||||||||||| |||||||||||||| ||||    
T  38879779 acaggaactaaaattggaattcgctaatattacagggacgaaaagaggtattta 38879726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 41600010 - 41599961
Alignment:
Q  122 ggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||| | |||||||||||||||||| ||| |||||||||| ||||    
T  41600010 ggactaaaaccgaaattcgctaatattacagggatgaaaagaggtattta 41599961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 41600280 - 41600333
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||| ||||||||| ||||    
T  41600280 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattta 41600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 48672333 - 48672280
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||| |||||||| | |||||| ||||||||||| |||||||||||||| ||||    
T  48672333 acagagactaaaaccgaaattcactaatattacagggacgaaaagaggtattta 48672280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 23704701 - 23704665
Alignment:
Q  135 aattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  23704701 aattcgctaatattacagggacgaaaagaggtattta 23704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 48648554 - 48648594
Alignment:
Q  123 gactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
    |||||||||| |||||||||||||||||  |||||||||||    
T  48648554 gactaaaatcgaaattcgctaatattactgggacgaaaaga 48648594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8524 - 8630
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||    
T  8524 cctccatttttggtcc-tcattttacgtgtcatgtatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggac 8622  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  8623 aaaatcta 8630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 8378 - 8328
Alignment:
Q  121 gggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||| | |||||||||||||||||| |||||||||||||| ||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattta 8328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7126094 - 7125926
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||| ||| ||    
T  7126094 cctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggac 7125995  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||            |||||||||||||||  ||||||||||||||||| | ||||||||||||    
T  7125994 aaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacaggaacgaaaagaggt 7125926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 993924 - 993761
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  993924 cctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggac 993825  T
Q  101 aaaatct-annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaaga 163  Q
     |||||| |         ||||||||||||| |  |||||||||||||||||  ||||||||||    
T  993824 taaatctaatttttttttacagggactaaaaccggaattcgctaatattacagagacgaaaaga 993761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14144102 - 14144209
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| |  |||||||||||||||||| | |||||||||| ||    
T  14144102 cctccacttttggtccctcattttacgtgccatgtatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggac 14144201  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  14144202 aaaatcta 14144209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24650877 - 24650770
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||   ||||||||||||||||| | |||||||||||||    
T  24650877 cctccatttttggtccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaac 24650778  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  24650777 aaaatcta 24650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 17762483 - 17762657
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||  |||||||||||||||||||| ||||||  || ||    
T  17762483 cctccacttttggtccctcattttatgtcccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggac 17762582  T
Q  101 aaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||             ||||||||||||| || |||||||||||| |||| |||||||||||||| ||||    
T  17762583 aaaatctaaatctttttttttacagggactaaaaccagaattcgctaatactacagggacgaaaagaggtattta 17762657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 23979104 - 23979276
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| | |||||||||| |||    
T  23979104 ctccacgtttggtcc-tcattttacgtgtcatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggaca 23979202  T
Q  102 aaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||             ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  23979203 aaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 23979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41001530 - 41001370
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| |||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||  |||||||||||||||||| | |||||||||| ||    
T  41001530 cctccatttttagtccctcattttacgtgccatgtatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggac 41001431  T
Q  101 aaaatct-annnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaa 160  Q
    ||||||| |         ||||||||||||| | |||||||||||||||||| ||||||||    
T  41001430 aaaatctaatttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaa 41001370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6817299 - 6817126
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||| | ||    
T  6817299 cctccatttttggtcccttattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggac 6817200  T
Q  101 aaaatcta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | ||||||            ||||||||||||| |  ||||| |||||||||||||||||||||||||| ||||    
T  6817199 ataatctaaatcttttttttacagggactaaaaccggaattcactaatattacaaggacgaaaagaggtattta 6817126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 14411870 - 14411974
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||| | |||||    
T  14411870 ccacttttggtccctcattttacgtgtcatgtatgtagattctgcttacgtggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaa 14411969  T
Q  104 atcta 108  Q
    |||||    
T  14411970 atcta 14411974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4919167 - 4919060
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||| ||||||||||||||  |||||||||||||||||| | |||||||||| ||    
T  4919167 cctccacttttggtccctcattttacgtaccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggac 4919068  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  4919067 aaaatcta 4919060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20709389 - 20709282
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||| | |||||||||| ||    
T  20709389 cctccactttttgtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggac 20709290  T
Q  101 aaaatcta 108  Q
    | ||||||    
T  20709289 agaatcta 20709282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31799817 - 31799710
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||||||||||||  || ||||||| || |||||||| |||||||||||| |  |||||||||||||||||||| |||||||||| ||    
T  31799817 cctccacttttggtccctcattttacatgccatgtatacaaattctgcttacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 31799718  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  31799717 aaaatcta 31799710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 30512459 - 30512298
Alignment:
Q  7 cttttggtccctcatttt-atgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    ||||| |||||||||||| | ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||| |||||||||| || ||||    
T  30512459 cttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaat 30512360  T
Q  106 cta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    |||            ||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  30512359 ctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggacgaaaagag 30512298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 30552799 - 30552638
Alignment:
Q  7 cttttggtccctcatttt-atgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    ||||| |||||||||||| | ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||| |||||||||| || ||||    
T  30552799 cttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaat 30552700  T
Q  106 cta---nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    |||            ||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  30552699 ctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggacgaaaagag 30552638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24837346 - 24837239
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||| |||||||||||| ||  ||||||| ||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  24837346 cctccacttttgatccctcattttacgtaccatgtatacagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggac 24837247  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  24837246 aaaatcta 24837239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 24074504 - 24074610
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||  ||| |  |||||||||||||||||| | |||||||| | |||    
T  24074504 ctccacttttggtccctcattttacgtgccatatatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggaca 24074603  T
Q  102 aaatcta 108  Q
    |||||||    
T  24074604 aaatcta 24074610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 29445014 - 29445114
Alignment:
Q  8 ttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct 107  Q
    |||| ||||||||||||| |||||||||||||| ||| | ||||||||||||||| |  |||||||||||||||||||| |||||||| | |||||||||    
T  29445014 tttttgtccctcattttacgtgtcatgtatgcaaattttactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatct 29445113  T
Q  108 a 108  Q
    |    
T  29445114 a 29445114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18336657 - 18336764
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||| || |||||||| || ||||| ||| |  || ||||||||||||||||| |||||||||| ||    
T  18336657 cctccacttttggtccctcattttacgtgacatgtatacaaattctgcttacatggtgtaataagggatcaaaagtggaagaatctgaaattacagggac 18336756  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  18336757 aaaatcta 18336764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 27159162 - 27159063
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    ||||||||| |||||||||||| ||| |  ||||| ||||| ||||||||||||||||| |  |||||||||||||||||||| |||||||||| |||||    
T  27159162 ccacttttgatccctcattttacgtgcc--gtatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaa 27159065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 27159192 - 27159324
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatct-annnnnnnnnacagggactaaaatca 133  Q
    ||||||||||||||||||||| || ||  |  |||||||| ||||||||| |||||||||||| ||||||||| |         ||| ||||||||| |     
T  27159192 tatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatctaaattttttttacaaggactaaaaccg 27159291  T
Q  134 aaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||||||||||||||||||||||||||||    
T  27159292 aaattcgctaatattacaaggacgaaaagaggt 27159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 24074446 - 24074306
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnn----acagggactaaaa 130  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||  ||||||||||             |||||||||||||    
T  24074446 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaa 24074347  T
Q  131 tcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
     | |||||||||||||||||| |||||||||||||| ||||    
T  24074346 ccgaaattcgctaatattacatggacgaaaagaggtattta 24074306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 14144044 - 14143905
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    |||||||||||| |||||||| || |||||   ||||||||||||||||| | |||||||||| ||||||||||            |||||||||||||     
T  14144044 tatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaac 14143945  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |  ||||||||||||||||| |||||||||||||| ||||    
T  14143944 cggaattcgctaatattacagggacgaaaagaggtattta 14143905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 7126152 - 7126225
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||    
T  7126152 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 7126225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 17762425 - 17762355
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaat 105  Q
    ||||||||||||||| ||||| |  || ||  |||||||||||||||||||| ||||||||||||||||||    
T  17762425 tatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaat 17762355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 24650934 - 24651007
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||| ||||||||||||||| || || ||  || |||||||||||||||||||||||||||| | ||||||||    
T  24650934 tatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatcta 24651007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 20709533 - 20709581
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  20709533 acagggactaaaaccaaaattcgttaatattacatggacgaaaagaggt 20709581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 29444862 - 29444816
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||    
T  29444862 acagggactaaaatcagaattcgttaatattacagggacgaaaagag 29444816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 6817356 - 6817429
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||| |||||||||| ||| || || ||  |||||||||||||||||| | |||||||||| ||||||||||    
T  6817356 tatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatcta 6817429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 14411753 - 14411700
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||    
T  14411753 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 14411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 14411840 - 14411780
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattaca 95  Q
    |||||| |||||||||||||| || || ||  |||||||||||||||||||| ||||||||    
T  14411840 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattaca 14411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 22571133 - 22571090
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaa 161  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  22571133 acagggactaaaatcggaattcgctaatattacaaggacaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 18336523 - 18336477
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    |||||||||||||||  ||||||||||||||| | ||||||||||||    
T  18336523 acagggactaaaatcggaattcgctaatattatagggacgaaaagag 18336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 994013 - 994054
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||  ||||||||| ||||||||||    
T  994013 gaccaaaagtggaagaatctgcaattacagggacaaaatcta 994054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 17762339 - 17762286
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| |||| ||||||||| ||||    
T  17762339 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattta 17762286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 20959330 - 20959399
Alignment:
Q  39 cagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||| || ||||  |||||  ||||||||||||| |||||| ||||| |||| ||||||||||    
T  20959330 cagattctgctaacatggttaaatgaacgaccaaaagtggaggaatctgaaattgcagggacaaaatcta 20959399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 22571248 - 22571159
Alignment:
Q  7 cttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacag 96  Q
    ||||||||||||||||| | || ||| | |  || |||||  |||||||||| |||||  |||||||||||||||||| | |||||||||    
T  22571248 cttttggtccctcatttcacgtatcacgcacacatattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacag 22571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 24837225 - 24837172
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||| ||||||| |||||||||||||| ||||    
T  24837225 acagggactaaaaccggaattcgctattattacagggacgaaaagaggtattta 24837172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 24837491 - 24837544
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||    ||||||||||||||||| |||||||||||||| ||||    
T  24837491 acagggactaaaactggaattcgctaatattacagggacgaaaagaggtattta 24837544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 29444949 - 29444876
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||||| ||||||| | |||||||| | ||| ||||||    
T  29444949 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatcta 29444876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 31799875 - 31799948
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||| |||||||||||||| || || ||  || |||||| |||||||||| |||||||| | ||||||||||    
T  31799875 tatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatcta 31799948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 41001620 - 41001661
Alignment:
Q  67 gaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||| |||||| ||| ||||||||||    
T  41001620 gaccaaaagtggaagaatctgaaattatagggacaaaatcta 41001661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 14144223 - 14144271
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||||||||||  |||||| ||||||||||  |||||||||||||    
T  14144223 acagggactaaaatcggaattcgttaatattacagtgacgaaaagaggt 14144271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 27159031 - 27158999
Alignment:
Q  134 aaattcgctaatattacaaggacgaaaagaggt 166  Q
    |||||||||||||||||| ||||||||||||||    
T  27159031 aaattcgctaatattacatggacgaaaagaggt 27158999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 4952 - 5056
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaa 103  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| || ||    
T  4952 ccacttttggtccctcattttacgtgccatgtatgtagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggactaa 5051  T
Q  104 atcta 108  Q
    |||||    
T  5052 atcta 5056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4764 - 4871
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| | |||||||| | ||    
T  4764 cctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggac 4863  T
Q  101 aaaatcta 108  Q
    ||||||||    
T  4864 aaaatcta 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 4618 - 4565
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  4618 acagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtattta 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1612 - 1775
Alignment:
Q  2 ctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaaca 101  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||   |||  |||||||||||||||||||| |||||||| | |||    
T  1612 ctccacttttggtccctcattttacgtgccatgtatgcagattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggaca 1711  T
Q  102 aaatctannnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagagg 165  Q
     ||||||         | ||||||||||| |  |||||| |||||||||| |||||||||||||    
T  1712 taatctaattttttttatagggactaaaaccggaattcgttaatattacagggacgaaaagagg 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 1553 - 1414
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta---nnnnnnnnnacagggactaaaat 131  Q
    |||| |||||||||||||||| || || ||  |||||||||||||||||||| |||||||||| ||| ||||||            ||||||||||||||    
T  1553 tatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacagggactaaaat 1454  T
Q  132 caaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    | |||||||| ||||||||  || ||||||||||| ||||    
T  1453 cgaaattcgcaaatattaccgggtcgaaaagaggtattta 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4046 - 3939
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaac 100  Q
    |||||||||||||||||||||||||  || ||||| |||||||||||||||| ||||| |||||  |||||| ||||||||||| | |||||||||| ||    
T  4046 cctccacttttggtccctcattttacttgccatgtgtgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggac 3947  T
Q  101 aaaatcta 108  Q
    | ||||||    
T  3946 ataatcta 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 3925 - 3879
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||||||    
T  3925 acagggactaaaaccggaattcgctaatattacagggacgaaaagag 3879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 4104 - 4177
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    ||||||||||||||||||||| || || ||  |||||||| || |||||||| ||||||||  |||| ||||||    
T  4104 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattacaacaacataatcta 4177  T

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Target: scaffold0881 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 397 - 305
Alignment:
Q  1 cctccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaatta 93  Q
    |||| |||||||||||||||||||| ||  |||||||||| |||||||| | ||||||||||||  |||||||||||||||||||| ||||||    
T  397 cctctacttttggtccctcattttacgtaccatgtatgcaaattctgcttatgtggtggaatgagggaccaaaagtggaagaatctgaaatta 305  T

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Target: scaffold0449 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 7404 - 7229
Alignment:
Q  4 ccacttttggtccctcattttatgtgtcatgtatgcag----attctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaa 99  Q
    |||||||||||||||||||||| ||  |||||||||||    ||| ||||  |||||||||||||  |||| ||||||||||||| | |||||||||| |    
T  7404 ccacttttggtccctcattttacgtaccatgtatgcagtcagattttgcttccgtggtggaatgagggaccgaaagtggaagaatatgaaattacaggga 7305  T
Q  100 caaaatcta----nnnnnnnnnacagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||             ||||| ||||| | || |||||||||||||||||||||||||||||||| ||||    
T  7304 caaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaaggacgaaaagaggtattta 7229  T

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Target: scaffold0449; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 7434 - 7507
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||| || |||| || || || || ||||||||||| ||||||||| |||||||||| ||||||||||    
T  7434 tatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatcta 7507  T

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Target: scaffold0449; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 7522 - 7575
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||| |||| ||||    
T  7522 acagggactaaaaccggaattcgctaatattacagggacgaaaataggtattta 7575  T

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Target: scaffold0176 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 15867 - 15996
Alignment:
Q  35 tatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatctannnnnnnnnacagggactaaaatcaa 134  Q
    ||||||||||||||||||||| || || || |||||||||||| |||||| | |||||||||| |||||||||          |||| |||||||| |      
T  15867 tatgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatgaaattacagggacaaaatctttttttttttacagagactaaaaccgg 15966  T
Q  135 aattcgctaatattacaaggacgaaaagag 164  Q
    ||||||||||||||||| ||||||||||||    
T  15967 aattcgctaatattacatggacgaaaagag 15996  T

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Target: scaffold0117 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 12216 - 12290
Alignment:
Q  34 gtatgcagattctgctgacgtggtggaatgacagaccaaaagtggaagaatctaaaattacaggaacaaaatcta 108  Q
    |||||||||||||||||||||| || || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  12216 gtatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatcta 12290  T

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Target: scaffold0117; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 12306 - 12352
Alignment:
Q  120 agggactaaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||||    
T  12306 agggactaaaaccggaattcgctaatattacagggacgaaaagaggt 12352  T

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Target: scaffold0586 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 5865 - 5904
Alignment:
Q  127 aaaatcaaaattcgctaatattacaaggacgaaaagaggt 166  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  5865 aaaatcaaaattcgctaatattacatggaccaaaagaggt 5904  T

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Target: scaffold0352 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 6001 - 6054
Alignment:
Q  118 acagggactaaaatcaaaattcgctaatattacaaggacgaaaagaggtgttta 171  Q
    |||||||||||||||  |||||||||||||| || |||| ||||||||| ||||    
T  6001 acagggactaaaatcggaattcgctaatattgcagggaccaaaagaggtattta 6054  T

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