View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19326_high_4 (Length: 374)
Name: NF19326_high_4
Description: NF19326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19326_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 352
Target Start/End: Original strand, 43669638 - 43669982
Alignment:
| Q |
10 |
aagaatatttgatacattgaggttttgctttgaagctataatgacgatcaccgcaaaaccaaagatgctattgcgtgagtttcatgccttttcagactnn |
109 |
Q |
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| T |
43669638 |
aagaatatttgatacattgaggttttgctttgaagctataataacgatcaccgcaaaaccaaagatgctattgcgtgagtttcatgctttttcagactaa |
43669737 |
T |
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| Q |
110 |
nnnnnnttatactaaagatagtagtatcacaaaaatctctaaataaattttttgacaacaatttgaaaataatttttatttcattgttgatctattatta |
209 |
Q |
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| T |
43669738 |
aaaaaattatactaaagatagtagtatcacaaaaatctctaaataaattttttgacaacaatttgaaaataatttttatttcattgttgatctattatta |
43669837 |
T |
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| Q |
210 |
tatagtcctgatattttgtgata---tattggaacaacttgaattaggaatatttcacgcataattgtaaatacgaagtgcttagcaccatgtggataac |
306 |
Q |
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| T |
43669838 |
tatagtcctgata-tttgtgatatactactggaacaacttgaattaggaatatttcacgcataattgtaaatacgaagtgcttagcaccatgtggataac |
43669936 |
T |
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| Q |
307 |
aaaattttgtgtgtagaannnnnnncaacacttttattgcacggct |
352 |
Q |
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| T |
43669937 |
aaaattttgtgtgtagaatttttttcaacacttttattgcacggct |
43669982 |
T |
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