View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19327_high_6 (Length: 304)
Name: NF19327_high_6
Description: NF19327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19327_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 286
Target Start/End: Complemental strand, 39626045 - 39625779
Alignment:
| Q |
20 |
ccattagataggatgggctaaatgatcaagagatgtcataaaaaatctgggtataaggtcattattcagactttcatttgtaaattataatatcatgtgc |
119 |
Q |
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| T |
39626045 |
ccattagataggatgggctaaatgatcaagagatgtcataaaaaatctgggtataaggtcattattcagactttcatttgtaaattataatatcatgtgc |
39625946 |
T |
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| Q |
120 |
tacattcctgtctctcttttacccttcacatctaaatgctaaattttcaaacttcaaacactagcacgtttttagccaaaattgataagagttttaacca |
219 |
Q |
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| T |
39625945 |
tacattcctgtctctcttttaccctttacatctaaatgctaaattttcaaacttcaaacactagcacgtttttagccaaaattgataagagttttaacca |
39625846 |
T |
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| Q |
220 |
agaagggagacatttgttaaaaccgttccacattaaattcttattctaaaagaatgttcgattattt |
286 |
Q |
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| T |
39625845 |
agaagggagacatttgttaaaaccgttccacattaaattcttattctaaaagaatgttcaattattt |
39625779 |
T |
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