View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19328_high_2 (Length: 562)

Name: NF19328_high_2
Description: NF19328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19328_high_2
NF19328_high_2
[»] chr4 (5 HSPs)
chr4 (57-553)||(44933703-44934199)
chr4 (139-537)||(46604478-46604885)
chr4 (24-137)||(44934216-44934329)
chr4 (24-85)||(46603399-46603460)
chr4 (24-85)||(46604918-46604979)
[»] chr3 (6 HSPs)
chr3 (139-537)||(38825548-38825955)
chr3 (143-537)||(11525018-11525421)
chr3 (24-114)||(1702672-1702762)
chr3 (24-85)||(38821188-38821249)
chr3 (24-85)||(38825988-38826049)
chr3 (24-114)||(11525454-11525542)
[»] chr1 (4 HSPs)
chr1 (139-537)||(17881369-17881776)
chr1 (24-85)||(17881275-17881336)
chr1 (24-85)||(17886072-17886133)
chr1 (24-85)||(17887598-17887659)
[»] chr2 (3 HSPs)
chr2 (408-486)||(13006083-13006161)
chr2 (28-116)||(13005891-13005979)
chr2 (507-553)||(13005824-13005870)
[»] chr8 (1 HSPs)
chr8 (24-85)||(43662204-43662265)
[»] chr7 (2 HSPs)
chr7 (215-301)||(26083091-26083177)
chr7 (215-301)||(26106878-26106964)
[»] chr6 (3 HSPs)
chr6 (215-301)||(4502475-4502561)
chr6 (215-301)||(15826027-15826113)
chr6 (215-276)||(34312021-34312082)
[»] chr5 (2 HSPs)
chr5 (215-301)||(548680-548766)
chr5 (215-301)||(30279092-30279178)
[»] scaffold1049 (1 HSPs)
scaffold1049 (215-276)||(232-293)


Alignment Details
Target: chr4 (Bit Score: 449; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 57 - 553
Target Start/End: Original strand, 44933703 - 44934199
Alignment:
Q  57 tgtatataagttgtgctattgtattgtccatattatcaaatattgatcaatgaaatcaataaattcaatttcttcaaattatttggctagtttatcatgt 156  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44933703 tgtatataagttgtgctactgtattgtccatattatcaaatattgatcaatgaaatcaataaattcaatttcttcaaattatttggctagtttatcctgt 44933802  T
Q  157 gagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcatcagcaatttatcttgctc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44933803 gagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcatcagcgatttatcttgctc 44933902  T
Q  257 ataatcctacctttcatgagcttataaagcatattgagattgattaccatgtgattagagaaaagattcaaaagggcaccattcacctcttaccagttcc 356  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  44933903 ataatcctacctttcatgagtgtataaagcatattgagattgattaccatgtaattagagaaaagattcaaaagggcaccattcacctcttatcagttcc 44934002  T
Q  357 atcatcaccccaacttgttgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactttgcaatctgcatagtcca 456  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44934003 atcatcacctcaacttgctgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactttgcaatctgtatagtcca 44934102  T
Q  457 acttgaggggcagtattaccatttatcactcgtaattatagtcattcttgtatttaacttagttagtctcttagtctttcattaatgtaattagaat 553  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44934103 acttgaggggcagtattaccatttatcactcgtaattatagtcgttcttgtatttaacttagttagtctcttagtctttcattaatttaattagaat 44934199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 139 - 537
Target Start/End: Original strand, 46604478 - 46604885
Alignment:
Q  139 ttggctagtttatcatgtgagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  46604478 ttggctagtttatcatgtgagattcaatggcttcattacctacttgctgacctatacattcctatcaaatctccatcttcagtttattgtgacaatgcat 46604577  T
Q  239 cagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgattaccatgtgattagagaaaagattcaaaagggcaccat 338  Q
    |||||||||||||||||||||| ||||| |||||||||| || ||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  46604578 cagcaatttatcttgctcataaccctacttttcatgagcgtacaaaacatattgagatagattgccatgtaattagagaaaagattcaaaagggcaccat 46604677  T
Q  339 tcacctcttaccagttccatcatcaccccaacttgttgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactt 438  Q
    |||||| |||||||||||||||||| | ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  46604678 tcacctattaccagttccatcatcatctcaacttgctgatgtatttactaaaccgcttcatgtcacctcgtttcaaagcttcatttccaagttgggactt 46604777  T
Q  439 tgcaatctgcatagtccaacttgaggggcagtattaccatttatcactc-------gtaattatagtcatt-cttgtatttaac-ttagttagtctctta 529  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||        ||| |||||| ||| |||||||||||| |||||||||||||||    
T  46604778 tgcaatctccatagtccaacttgagggggagtattaccatttatcactcttcatatttaactatagttattccttgtatttaactttagttagtctctta 46604877  T
Q  530 gtctttca 537  Q
    ||||||||    
T  46604878 gtctttca 46604885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 44934216 - 44934329
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtccatattatcaaatattgatcaatgaaatcaataaattca 123  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  44934216 gtaattgttttggctagctagctttttttccattgtatataagttgtgctactgtattgtccatgttatcaaatattgatcaatgaaatcaataaattca 44934315  T
Q  124 atttcttcaaatta 137  Q
    ||||||||||||||    
T  44934316 atttcttcaaatta 44934329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 46603399 - 46603460
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  46603399 gtaattgttttggctagctagcttctttaccattgtatataagttgttctattgtattgtcc 46603460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 46604918 - 46604979
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  46604918 gtaattgttttggctagctagcttctttaccattgtatataagttgttctattgtattgtcc 46604979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-150; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 139 - 537
Target Start/End: Original strand, 38825548 - 38825955
Alignment:
Q  139 ttggctagtttatcatgtgagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38825548 ttggctagtttatcatgtgagattcaatggcttcattacctacttgctgacctatacattcctatcaaatctccatcttcagtttattgtgacaatgcat 38825647  T
Q  239 cagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgattaccatgtgattagagaaaagattcaaaagggcaccat 338  Q
    |||||||||||||||||||||| ||||| |||||||||| || ||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  38825648 cagcaatttatcttgctcataaccctacttttcatgagcgtacaaaacatattgagatagattgccatgtaattagagaaaagattcaaaagggcaccat 38825747  T
Q  339 tcacctcttaccagttccatcatcaccccaacttgttgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactt 438  Q
    |||||| |||||||||||||||||| | ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  38825748 tcacctattaccagttccatcatcatctcaacttgctgatgtatttactaaaccgcttcatgtcacctcgtttcaaagcttcatttccaagttgggactt 38825847  T
Q  439 tgcaatctgcatagtccaacttgaggggcagtattaccatttatcactc-------gtaattatagtcatt-cttgtatttaac-ttagttagtctctta 529  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||        ||| |||||| ||| |||||||||||| |||||||||||||||    
T  38825848 tgcaatctccatagtccaacttgagggggagtattaccatttatcactcttcatatttaactatagttattccttgtatttaactttagttagtctctta 38825947  T
Q  530 gtctttca 537  Q
    ||||||||    
T  38825948 gtctttca 38825955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 143 - 537
Target Start/End: Original strand, 11525018 - 11525421
Alignment:
Q  143 ctagtttatcatgtgagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcatcagc 242  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||| |    
T  11525018 ctagtttatcatgtgagattcaatggcttcattacctacttgctgacctatacattcctttcaaatctccgtcttcagtttattgtgataatgcatcaac 11525117  T
Q  243 aatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgattaccatgtgattagagaaaagattcaaaagggcaccattcac 342  Q
    |||||||||||||||||| ||||| |||||||||| || ||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  11525118 aatttatcttgctcataaccctacttttcatgagcgtacaaaacacattgagaatgatttccatgtgattagagaaaagattcaaaagggcaccattcaa 11525217  T
Q  343 ctcttaccagttccatcatcaccccaacttgttgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactttgca 442  Q
    || |||||||||||||||||| | ||||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11525218 ctattaccagttccatcatcatctcaacttgctgatgtatttaccaaaccgcttcatgtcacctcgtttcaaagcttcatttccaagttgggactttgca 11525317  T
Q  443 atctgcatagtccaacttgaggggcagtattaccatttatcactc-------gtaattatagtcatt-cttgtatttaac-ttagttagtctcttagtct 533  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||        ||| |||||| ||| |||||||||||| |||||||||||||||||||    
T  11525318 atctccatagtccaacttgagggggagtattaccatttattactcttcatatttaactatagttattccttgtatttaactttagttagtctcttagtct 11525417  T
Q  534 ttca 537  Q
    ||||    
T  11525418 ttca 11525421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 1702672 - 1702762
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtccatattatcaaatattgatcaatgaaatca 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| |  ||| ||| |||||| ||||||||||    
T  1702672 gtaactgttttggctagctagcttctttaccattgtatataagttgttctactgtattgtcctttatataaaaaattgattaatgaaatca 1702762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 38821188 - 38821249
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38821188 gtaattgttttggctagctagcttctttaccattgtatataagttgttctattgtattgtcc 38821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 38825988 - 38826049
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38825988 gtaattgttttggctagctagcttctttaccattgtatataagttgttctattgtattgtcc 38826049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 11525454 - 11525542
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtccatattatcaaatattgatcaatgaaatca 114  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||| ||| | |||||||| | ||||  || |||||| ||||||||||    
T  11525454 gtaactgttttggctagttagcttctttaccattgtttataagttgttctactatattgtcctttttat--aaaattgattaatgaaatca 11525542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 139 - 537
Target Start/End: Complemental strand, 17881776 - 17881369
Alignment:
Q  139 ttggctagtttatcatgtgagattcaatggcttcattacctccttgttgacctatacattcctatcagatctccttcttcagtttattgtgacaatgcat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17881776 ttggctagtttatcatgtgagattcaatggcttcattacctacttgctgacctatacattcctatcaaatctccatcttcagtttattgtgacaatgcat 17881677  T
Q  239 cagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgattaccatgtgattagagaaaagattcaaaagggcaccat 338  Q
    |||||||||||||||||||||| ||||| |||||||||| || ||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  17881676 cagcaatttatcttgctcataaccctacttttcatgagcgtacaaaacatattgagatagattgccatgtaattagagaaaagattcaaaagggcaccat 17881577  T
Q  339 tcacctcttaccagttccatcatcaccccaacttgttgatgtatttactaaaccccttcatgccacctcgtttcaaagcttcatttctaagttgggactt 438  Q
    |||||| |||||||||||||||||| | ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  17881576 tcacctattaccagttccatcatcatctcaacttgctgatgtatttactaaaccgcttcatgtcacctcgtttcaaagcttcatttccaagttgggactt 17881477  T
Q  439 tgcaatctgcatagtccaacttgaggggcagtattaccatttatcactc-------gtaattatagtcatt-cttgtatttaac-ttagttagtctctta 529  Q
    |||||||| ||||||||||||||||||| |||||||| |||||| ||||        ||| |||||| ||| |||||||||||| |||||||||||||||    
T  17881476 tgcaatctccatagtccaacttgagggggagtattactatttattactcttcatatttaactatagttattccttgtatttaactttagttagtctctta 17881377  T
Q  530 gtctttca 537  Q
    ||||||||    
T  17881376 gtctttca 17881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 17881336 - 17881275
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||    
T  17881336 gtaactgttttggctagctagcttctttaccattgtatataagttcttctactgtattgtcc 17881275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 17886133 - 17886072
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||    
T  17886133 gtaactgttttggctagctagcttctttaccattgtatataagttcttctactgtattgtcc 17886072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 17887659 - 17887598
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||    
T  17887659 gtaactgttttggctagctagcttctttaccattgtatataagttcttctactgtattgtcc 17887598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 13006083 - 13006161
Alignment:
Q  408 gtttcaaagcttcatttctaagttgggactttgcaatctgcatagtccaacttgaggggcagtattaccatttatcact 486  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  13006083 gtttcaaaacttcatttccaagttgggactttgcaatccgcatagtccaacttgagggggagtattactatttatcact 13006161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 13005891 - 13005979
Alignment:
Q  28 ctgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtccatattatcaaatattgatcaatgaaatcaat 116  Q
    |||||||||||| ||| ||||||| |||||||||||||| | |  || ||||||||| |||| |||||| |||||||||| ||||||||    
T  13005891 ctgttttggctacctaacttctttaccattgtatataagctattgtactgtattgtctatatcatcaaaaattgatcaataaaatcaat 13005979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 553
Target Start/End: Original strand, 13005824 - 13005870
Alignment:
Q  507 tatttaacttagttagtctcttagtctttcattaatgtaattagaat 553  Q
    ||||||||||||||| ||||||||||||||| || | ||||||||||    
T  13005824 tatttaacttagttaatctcttagtctttcactagtttaattagaat 13005870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 43662204 - 43662265
Alignment:
Q  24 gtaactgttttggctagctagcttcttttccattgtatataagttgtgctattgtattgtcc 85  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||    
T  43662204 gtaactgttttggctagctagcttctttgccattgtatataagttgttctactgtattgtcc 43662265  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 26083177 - 26083091
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  26083177 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 26083091  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 26106964 - 26106878
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  26106964 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 26106878  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 4502475 - 4502561
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  4502475 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 4502561  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 15826027 - 15826113
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  15826027 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 15826113  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 34312021 - 34312082
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgag 276  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||    
T  34312021 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgag 34312082  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 548766 - 548680
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  548766 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 548680  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 30279178 - 30279092
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgagcttataaagcatattgagattgatt 301  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||   | ||| || |||||||||||||    
T  30279178 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgagagaacaaaacacattgagattgatt 30279092  T

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Target: scaffold1049 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1049
Description:

Target: scaffold1049; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 293 - 232
Alignment:
Q  215 cttcagtttattgtgacaatgcatcagcaatttatcttgctcataatcctacctttcatgag 276  Q
    ||||||| ||||||||||||  |||||| || ||||||||||||||||| || |||||||||    
T  293 cttcagtatattgtgacaataaatcagccatatatcttgctcataatccaacatttcatgag 232  T

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