View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19328_low_16 (Length: 231)
Name: NF19328_low_16
Description: NF19328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19328_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 8168874 - 8168680
Alignment:
| Q |
19 |
attacatcaacttagataaacaaacataatataagataacgactaagactcgacataatctactcaactttaacattcaaccacatcggtccttctttat |
118 |
Q |
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| T |
8168874 |
attacatcaatttagataaataaacataatataagataacgaccaagactcgacataatctactcaactttaacatacaaccacatcggtccttctttat |
8168775 |
T |
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| Q |
119 |
cctcttcgaaccataacatatattttacatcaatgtcattcctcaagaagc-tgaaaattgtcacatatagtgtgggtgccattgtcattttcat |
212 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| |
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| T |
8168774 |
cctcttcgaaccaaaacatatattttacatcaatgtcattcctcaagaagcttaaaaattgtcacatatagtgcgggtgccattgtcattttcat |
8168680 |
T |
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