View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19328_low_7 (Length: 421)
Name: NF19328_low_7
Description: NF19328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19328_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 22 - 409
Target Start/End: Complemental strand, 8188402 - 8188015
Alignment:
| Q |
22 |
aggttttcattttcatgagatgaaagaccgtcacgttctccaccctgtaatacagctgctagaaattttttatactcttcttcatcatcgacattttgaa |
121 |
Q |
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| T |
8188402 |
aggttttcattttcatgagatgaaagaccgtcacgttctccaccctgtaatacagctgctagaaattttttatactcttcttcatcatcgacattttgaa |
8188303 |
T |
|
| Q |
122 |
catcatcttcatcatcggtctcttgaagaaaggtctcaagctcatcaagactgaaaccttcaagcgaataacgagctctagtacgcatacaaatagcatc |
221 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8188302 |
catcatcttcatcatcagtctcttgaagaaaggtctcaagctcatcaagactgaaaccttcaagcgaataacgagctctagtacgcatacaaatagcatc |
8188203 |
T |
|
| Q |
222 |
ctcagtatctatgtctatcactgggcttcggggtttcgttgtgttgcttatgtcttctatcctaaaaccatcactagtaccactaatcaagtcattcttc |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8188202 |
ctcagtatctatgtctatcactgggcttcggggtttcgttgtgttgcttatgtcttctatcctaaaaccatcactagtaccactaatcaagtcattcttc |
8188103 |
T |
|
| Q |
322 |
ttctccttatcaatctccaattgagatatcatacctgccgcttctaaaacaacttcctcctcgccatgttcagaatctgctacactac |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
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| T |
8188102 |
ttctccttatcaatctccaattgagatatcatacctgccgcttctaaaacaatttcctcctcgccatgttcagaatctactgcactac |
8188015 |
T |
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