View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1932_high_11 (Length: 281)
Name: NF1932_high_11
Description: NF1932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1932_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 91 - 263
Target Start/End: Original strand, 3670043 - 3670215
Alignment:
| Q |
91 |
cctaatcccctttcattaaactcaacccagattctttggtccgtcccaatcacaatatttaaccaaacaaaatcttgtatgctcctttttcccctctcga |
190 |
Q |
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| T |
3670043 |
cctaatcctctttcattaaactcaactcagattctttgatcctccccaatcacaatatttaaccaaacaaaatcttgtatgctccttttccccctctcga |
3670142 |
T |
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| Q |
191 |
taaaacccatcaatatcaaccctttctctccactgtccgggtttgcaacggatcgcatgaatcaaacccatat |
263 |
Q |
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|||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
3670143 |
taaaactcatcaacatcaaacctttctctccaccgtccgggtttgcaacggatcgcatgaatcaaacccatat |
3670215 |
T |
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