View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19330_high_28 (Length: 210)
Name: NF19330_high_28
Description: NF19330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19330_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 30018940 - 30019096
Alignment:
| Q |
12 |
atactacttaatgcaagttttataggtaggtaaacggtccatcaatttcaacacatgtgtgagattaagtggtggcctagagaatgtataccatgt---a |
108 |
Q |
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| T |
30018940 |
atactacttaatgcaagttttataggtaggtaaacggtccatcaatttcaacacatgtgtgagatgaagtggtggcctagagaatgtatatcatgtatga |
30019039 |
T |
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| Q |
109 |
tgattgatcatgcataccatagaagcatataac---taagtgtggaatatatcctct |
162 |
Q |
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| T |
30019040 |
tgattgatcatgcataccatagaagcatataacttataagtgtggaatatatcctct |
30019096 |
T |
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