View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19330_low_14 (Length: 344)
Name: NF19330_low_14
Description: NF19330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19330_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 104161 - 104487
Alignment:
| Q |
1 |
atttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaagatggtgaaggttccctagttgaggaaccaaatgacc |
100 |
Q |
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| T |
104161 |
atttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaagatggtgaaggttccctagttgaggaaccaaatgacc |
104260 |
T |
|
| Q |
101 |
agaaagttttgcatgtccaaggtctctacaatgcatagatgaggaaccaaattaattaacagtgttgaggtgagtaataattggtaaggttgaagaaaag |
200 |
Q |
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| T |
104261 |
agaaagttttgcatgtccaaggtctctacaatgcatagatgaggaaccaaattaattaacagtgttgaggtgagtaataattggtaaggttgaagaaaag |
104360 |
T |
|
| Q |
201 |
aagagaaagtaaaagatagttacagtctagtaacgtggttatcacgatcacaggtaacatgaaaccatgtacaaggatccaccaaagtggggtcccaact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
104361 |
aagagaaagtaaaagatagttacagtctagtaacgtggttatcacgatcacaggtaacatgaaaccatgtacaaggatccaccaaagtggggtcccaact |
104460 |
T |
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| Q |
301 |
ctgtagaatgttatttgggtcttttac |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
104461 |
ctgtagaatgttatttgggtcttttac |
104487 |
T |
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