View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19330_low_9 (Length: 404)
Name: NF19330_low_9
Description: NF19330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19330_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 53478151 - 53478535
Alignment:
| Q |
1 |
ataagaattgtctcgttagggagaaattgaaagaaaaataccgaattgaataaagaattacaagaccacaattttattcaaatgattccaagtttaacta |
100 |
Q |
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| T |
53478151 |
ataagaattgtctcgttagggagaaattgaaagaaaaataccgaattgaataaagaattacaagaccacaattttattcaaatgattccaagtttaacta |
53478250 |
T |
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| Q |
101 |
aaacatatgatagcttaacacaaataatgacctcaaaattaagacgttgaaaacctacatatgtgaagagttatcaatcaatgaaacatttttgttgaat |
200 |
Q |
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| T |
53478251 |
aaacatatgatagcttaacacaaataatgacctcaaaattaagacgttgaaaacctacatatg-gaagagttatcaatcaatgaaacatttttgttgaat |
53478349 |
T |
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| Q |
201 |
attaagtcaccatgtgagactcttcaattgtgacgtaccaagtaggttctctatatgtattaaccacaagttagttgaattcaatcatgaagtaattgat |
300 |
Q |
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| T |
53478350 |
attaagtcaccatgtgagactcttcaattgtgacgtaccaagtaggttctctatatgtattaaccccaagttagttgaattcaatcatgaagtaattgat |
53478449 |
T |
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| Q |
301 |
gatattaaatggatttgaatcccacttctcaaaggatgatggtgaccaatatacattaaacagctacgaaccttagcagtgtgtga |
386 |
Q |
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| T |
53478450 |
gatattaaatggatttgaatcccacttctcaaaggatgatggtgaccaatatacattaaacagctacgaaccttagcagtgtgtga |
53478535 |
T |
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