View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19332_high_2 (Length: 331)

Name: NF19332_high_2
Description: NF19332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19332_high_2
NF19332_high_2
[»] chr7 (24 HSPs)
chr7 (1-253)||(18873168-18873420)
chr7 (1-248)||(15167983-15168230)
chr7 (1-244)||(10895795-10896038)
chr7 (10-252)||(14422802-14423043)
chr7 (1-259)||(12709833-12710091)
chr7 (1-259)||(13122904-13123162)
chr7 (10-248)||(16009395-16009631)
chr7 (9-259)||(13743526-13743774)
chr7 (40-259)||(12590633-12590850)
chr7 (40-259)||(13007281-13007497)
chr7 (52-246)||(16677152-16677348)
chr7 (52-246)||(17651388-17651584)
chr7 (193-259)||(21230949-21231015)
chr7 (193-248)||(11382871-11382926)
chr7 (193-248)||(11389348-11389403)
chr7 (193-259)||(20311039-20311107)
chr7 (129-248)||(13679428-13679548)
chr7 (194-249)||(2971254-2971309)
chr7 (194-249)||(20906461-20906516)
chr7 (194-248)||(11311059-11311113)
chr7 (213-254)||(831628-831669)
chr7 (213-254)||(1196808-1196849)
chr7 (213-254)||(34958578-34958619)
chr7 (192-248)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (1-253)||(22750949-22751201)
chr5 (10-260)||(38144525-38144773)
chr5 (10-248)||(28370055-28370291)
chr5 (10-248)||(19512204-19512441)
chr5 (40-253)||(23528479-23528690)
chr5 (184-248)||(18407944-18408008)
chr5 (193-259)||(22438736-22438803)
chr5 (184-248)||(23111200-23111264)
chr5 (194-249)||(19236900-19236955)
chr5 (134-260)||(34830024-34830150)
chr5 (193-260)||(42961566-42961633)
chr5 (196-249)||(22461158-22461211)
chr5 (196-249)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (1-248)||(14762758-14763005)
chr3 (1-246)||(38310802-38311047)
chr3 (16-246)||(20247791-20248021)
chr3 (9-246)||(24192771-24193009)
chr3 (10-248)||(9534146-9534382)
chr3 (10-249)||(23370505-23370743)
chr3 (58-249)||(24933828-24934016)
chr3 (13-246)||(55499104-55499337)
chr3 (40-259)||(41455087-41455304)
chr3 (80-259)||(16801457-16801635)
chr3 (187-248)||(18929239-18929300)
chr3 (184-248)||(17240513-17240577)
chr3 (194-249)||(13302240-13302295)
chr3 (194-249)||(13323787-13323842)
chr3 (135-249)||(10389443-10389557)
chr3 (135-249)||(10414532-10414646)
chr3 (135-249)||(10421202-10421316)
chr3 (194-249)||(12033444-12033499)
chr3 (194-249)||(13312896-13312951)
chr3 (194-249)||(17131732-17131787)
chr3 (194-249)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-259)||(11840-12098)
scaffold0026 (10-249)||(111504-111741)
[»] chr6 (23 HSPs)
chr6 (15-248)||(23057760-23057993)
chr6 (1-259)||(29614136-29614394)
chr6 (10-248)||(23839016-23839253)
chr6 (10-259)||(10986170-10986418)
chr6 (13-248)||(4477678-4477912)
chr6 (10-259)||(18800255-18800503)
chr6 (114-259)||(930085-930229)
chr6 (1-246)||(21565214-21565458)
chr6 (40-259)||(12168212-12168428)
chr6 (40-259)||(19287121-19287337)
chr6 (40-259)||(19785859-19786075)
chr6 (40-259)||(19878305-19878521)
chr6 (40-259)||(19884081-19884297)
chr6 (60-249)||(34639986-34640173)
chr6 (60-249)||(34646660-34646847)
chr6 (135-249)||(25469704-25469816)
chr6 (193-259)||(24512833-24512899)
chr6 (52-248)||(9187352-9187550)
chr6 (192-248)||(25397172-25397228)
chr6 (192-248)||(19471335-19471391)
chr6 (192-248)||(25348486-25348542)
chr6 (165-249)||(31252394-31252478)
chr6 (192-246)||(25598643-25598697)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-256)||(987-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-256)||(49988-50241)
[»] chr4 (12 HSPs)
chr4 (1-259)||(8045822-8046079)
chr4 (1-259)||(11847915-11848179)
chr4 (60-249)||(53483573-53483760)
chr4 (193-259)||(15408139-15408205)
chr4 (59-249)||(27906130-27906321)
chr4 (192-248)||(8834895-8834951)
chr4 (192-248)||(13888641-13888697)
chr4 (165-246)||(14486632-14486713)
chr4 (192-248)||(15245215-15245271)
chr4 (192-243)||(22724691-22724742)
chr4 (213-254)||(15747551-15747592)
chr4 (192-248)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (40-259)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-259)||(740-998)
[»] chr2 (17 HSPs)
chr2 (10-248)||(19661454-19661690)
chr2 (10-248)||(6483536-6483772)
chr2 (10-248)||(6487003-6487239)
chr2 (52-259)||(26583687-26583892)
chr2 (1-246)||(23089057-23089301)
chr2 (1-246)||(23878817-23879060)
chr2 (1-248)||(23101463-23101709)
chr2 (135-249)||(5706023-5706137)
chr2 (184-248)||(23265133-23265197)
chr2 (184-248)||(23280201-23280265)
chr2 (187-248)||(21908353-21908414)
chr2 (192-248)||(24661576-24661632)
chr2 (194-249)||(10577-10632)
chr2 (68-259)||(23168288-23168483)
chr2 (68-259)||(23579545-23579740)
chr2 (194-249)||(25180929-25180984)
chr2 (177-258)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-246)||(14398-14635)
[»] chr8 (15 HSPs)
chr8 (1-246)||(8727735-8727980)
chr8 (10-249)||(44477441-44477678)
chr8 (10-249)||(44492599-44492836)
chr8 (1-259)||(23866422-23866680)
chr8 (40-259)||(17054440-17054656)
chr8 (10-157)||(27940946-27941091)
chr8 (139-248)||(18614217-18614327)
chr8 (184-248)||(23482053-23482117)
chr8 (193-259)||(14056553-14056619)
chr8 (192-248)||(39364919-39364975)
chr8 (193-259)||(25111976-25112042)
chr8 (194-248)||(29643386-29643440)
chr8 (194-249)||(24320670-24320725)
chr8 (193-260)||(27940840-27940907)
chr8 (192-248)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (10-248)||(20437024-20437261)
chr1 (40-259)||(41111884-41112100)
chr1 (184-248)||(32651563-32651627)
chr1 (193-248)||(19663517-19663572)
chr1 (184-248)||(18712790-18712854)
chr1 (192-248)||(20805320-20805376)
chr1 (193-248)||(11158093-11158148)
chr1 (192-246)||(10811785-10811839)
chr1 (194-249)||(20851132-20851187)
chr1 (194-249)||(20857759-20857814)
chr1 (194-249)||(21706276-21706331)
chr1 (194-249)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (10-249)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (10-249)||(1525-1763)
[»] scaffold0117 (2 HSPs)
scaffold0117 (2-259)||(1887-2143)
scaffold0117 (2-259)||(8564-8820)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-259)||(11150-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (9-259)||(109-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (9-260)||(17985-18236)
[»] scaffold0154 (1 HSPs)
scaffold0154 (52-259)||(30715-30923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-246)||(3295-3540)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-246)||(3624-3868)
[»] scaffold0796 (2 HSPs)
scaffold0796 (58-254)||(1727-1920)
scaffold0796 (58-254)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (166-253)||(904-991)
scaffold0456 (166-253)||(8049-8136)
scaffold0456 (9-105)||(806-901)
scaffold0456 (9-105)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-89)||(3470-3558)
[»] scaffold0129 (1 HSPs)
scaffold0129 (137-255)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (193-259)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (184-248)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (184-248)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (193-259)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (193-248)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (193-259)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (184-248)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (195-259)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (184-248)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (184-248)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (197-259)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (59-259)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (160-259)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (165-249)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (129-248)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (192-248)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (227-262)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (193-248)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (177-258)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (192-252)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (59-246)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (194-249)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (194-249)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (194-249)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (194-248)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (165-249)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (192-248)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (234-262)||(80293-80321)
scaffold0003 (234-262)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 18873168 - 18873420
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18873168 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 18873267  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873268 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 18873367  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873368 agaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 15167983 - 15168230
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15167983 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 15168082  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168083 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 15168182  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168183 agaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 10896038 - 10895795
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  10896038 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 10895939  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaatttt 199  Q
    ||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  10895938 caagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaatttt 10895840  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttac 244  Q
    || |||||||||||||||||||| |||||||||||||||||||||    
T  10895839 caaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  14422802 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14422901 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttagttt 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 12710091 - 12709833
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatt 99  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||||||    
T  12710091 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatatt 12709993  T
Q  100 acaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattt 198  Q
    ||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  12709992 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 12709894  T
Q  199 tcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709893 tcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 13123162 - 13122904
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatt 99  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||||||    
T  13123162 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatatt 13123064  T
Q  100 acaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattt 198  Q
    ||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  13123063 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 13122965  T
Q  199 tcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122964 tcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  16009395 ttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  16009494 taacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 9 - 259
Target Start/End: Original strand, 13743526 - 13743774
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 108  Q
    ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  13743526 attcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  109 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 208  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  52 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 151  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  152 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  52 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 151  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  152 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 21231015 - 21230949
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 21230949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaa 259  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  129 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 227  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  228 gatagtctcacccttacctta 248  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  213 ttatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  213 ttatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  213 ttatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 22750949 - 22751201
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  22750949 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 22751048  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751049 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 22751148  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751149 agaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 260
Target Start/End: Complemental strand, 38144773 - 38144525
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||| |||||    
T  38144773 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38144674 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  210 agattatgattatcgagagatagtctcacccttaccttagttttgcagaat 260  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagttttgcagaat 38144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  28370291 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28370192 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  |||||| |||||    
T  19512204 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19512303 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  209 tagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 253
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  239 ccttaccttagtttt 253  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 259  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 260
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  134 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 232  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  233 tctcacccttaccttagttttgcagaat 260  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 42961566 - 42961633
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 260  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 42961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  196 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  196 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 14763005 - 14762758
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  14763005 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 14762906  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762905 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 14762806  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762805 agaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38311047 - 38310802
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  38311047 atacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 38310948  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38310947 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattc 38310848  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38310847 agaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  16 aattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacat 115  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  116 gattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  216 tgattatcgagagatagtctcacccttacct 246  Q
    ||||||| |||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttttcattctgaacattatattacaacaga 107  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  24192771 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  108 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaat 206  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  207 tatagattatgattatcgagagatagtctcacccttacct 246  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  9534146 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9534245 taacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  23370743 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23370644 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttag 249  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  58 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 157  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  158 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
       |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  13 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 112  Q
    ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||||||| |||||| | ||||||||| ||||||    
T  55499337 atcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  113 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattata 210  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   || ||| ||||||||||||| | ||||||| |    
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaattttcccgaaattaca 55499141  T
Q  211 gattat-gattatcgagagatagtctcacccttacct 246  Q
     |||||  ||||  |||||||||||||||||||||||    
T  55499140 tattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 16801635 - 16801457
Alignment:
Q  80 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 178  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  179 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  135 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 234  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  235 tcacccttaccttag 249  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  135 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 234  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  235 tcacccttaccttag 249  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  135 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 234  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  235 tcacccttaccttag 249  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 215; Significance: 1e-118; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 12098 - 11840
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  12098 atacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatatta 11999  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  11998 caagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttc 11899  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11898 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  111504 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  111603 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  210 agattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  15 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 114  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  115 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  215 atgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 29614394 - 29614136
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||  || |    
T  29614394 atacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-a 29614296  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt-ccaaaactatgcaattaggtcaatttt 199  Q
    ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||    
T  29614295 caagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaatttt 29614196  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614195 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 23839016 - 23839253
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  23839016 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  209 tagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 10986418 - 10986170
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  10986418 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  10986319 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  13 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 112  Q
    ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||     
T  4477678 atcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  113 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatag 211  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  212 attatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 18800255 - 18800503
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| ||||||| | |||||||||||||    
T  18800255 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  18800354 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  114 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 213  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  214 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21565458 - 21565214
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||    
T  21565458 atacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatta 21565360  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt 199  Q
    ||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||    
T  21565359 caacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaatttt 21565262  T
Q  200 cagaaattatagattat-gattatcgagagatagtctcacccttacct 246  Q
    | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565261 ccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  239 ccttaccttagttttgcagaa 259  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 60 - 249
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  60 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 159  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  160 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 60 - 249
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  60 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 159  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  160 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  135 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 234  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  235 tcacccttaccttag 249  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 24512899 - 24512833
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaa 24512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 248
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  52 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 151  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  152 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  165 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 987 - 1240
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  987 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatatta 1085  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  1086 caagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 1184  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 256  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1185 aggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 49988 - 50241
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49988 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatatta 50086  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  50087 caagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 50185  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 256  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50186 aggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 8046079 - 8045822
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  8046079 atacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatatta 8045980  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 200  Q
    ||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  8045979 caagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 8045881  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045880 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 11847915 - 11848179
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11847915 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 11848014  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaattaggtca 194  Q
     || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      || || || ||||||||||| | |||||||    
T  11848015 taaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtca 11848114  T
Q  195 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848115 attttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 249
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  60 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 159  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  160 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 15408139 - 15408205
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaa 15408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 249
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  59 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 158  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  159 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  165 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 243  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  213 ttatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  40 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 139  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  140 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 998 - 740
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| |||||||||||| || |||||||||||||||    
T  998 atacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatatta 900  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaatttt 199  Q
    ||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  899 caagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt 800  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  799 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 19661690 - 19661454
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  19661690 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661591 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6483536 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6483635 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6487003 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6487102 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  210 agattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 26583687 - 26583892
Alignment:
Q  52 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 151  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  152 ccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtt 251  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T
Q  252 ttgcagaa 259  Q
    ||||||||    
T  26583885 ttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23089301 - 23089057
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||    
T  23089301 atacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatta 23089203  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt 199  Q
    ||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||    
T  23089202 caacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaatttt 23089105  T
Q  200 cagaaattatagattat-gattatcgagagatagtctcacccttacct 246  Q
    | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089104 ccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23878817 - 23879060
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| | ||||    
T  23878817 atacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacatta 23878915  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaatttt 199  Q
    ||||| |||||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||||||    
T  23878916 caacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaatttt 23879013  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
      ||||||||| || || ||||  |||||||||||||||||||||||    
T  23879014 tcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 23101709 - 23101463
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||| | | ||||    
T  23101709 atacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacatta 23101611  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt 199  Q
    ||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||||||    
T  23101610 caacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaatttt 23101513  T
Q  200 cagaaattatagattat-gattatcgagagatagtctcacccttacctta 248  Q
    | ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101512 ccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  135 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 233  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  234 ctcacccttaccttag 249  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  68 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 167  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  168 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  68 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 167  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  168 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  177 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 258  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 108  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||    
T  14635 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  109 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatt 207  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  208 atagattatgattatcgagagatagtctcacccttacct 246  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8727980 - 8727735
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||    
T  8727980 atacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacatta 8727881  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaatttt 199  Q
    |||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8727880 caacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttt 8727782  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727781 cagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44477441 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44477540 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  210 agattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44492599 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 209  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44492698 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  210 agattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 23866422 - 23866680
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatt 99  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| |||||||||||  |||||||||||||||||    
T  23866422 atacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatatt 23866520  T
Q  100 acaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattt 198  Q
    ||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  23866521 acaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tt 23866619  T
Q  199 tcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866620 tcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  239 ccttaccttagttttgcagaa 259  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  27941091 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaa 157  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  27940992 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  139 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 237  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  238 cccttacctta 248  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 14056619 - 14056553
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaa 14056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 27940907 - 27940840
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 260  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 27940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 20437261 - 20437024
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||| |||    
T  20437261 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20437162 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  209 tagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  40 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 138  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  139 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 238  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  239 ccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  10433 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10334 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttag 249  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  10 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  1763 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  110 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1664 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttag 249  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 2143 - 1887
Alignment:
Q  2 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 101  Q
    ||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  102 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttc 200  Q
    || ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  2043 aagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 8820 - 8564
Alignment:
Q  2 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 101  Q
    ||||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  102 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttc 200  Q
    || ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  8720 aagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  201 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 11150 - 11407
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| ||||||| ||||||| | ||||    
T  11150 atacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacatta 11248  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaatttt 199  Q
    |||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  11249 caacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt 11347  T
Q  200 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11348 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 9 - 259
Target Start/End: Original strand, 109 - 356
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 108  Q
    ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  109 attcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  109 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 208  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  209 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 260
Target Start/End: Original strand, 17985 - 18236
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaa-caga 107  Q
    ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| | ||||||| ||||    
T  17985 attcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  108 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaat 206  Q
    ||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  207 tatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 260  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 18236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 30715 - 30923
Alignment:
Q  52 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 151  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  152 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 250  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  251 tttgcagaa 259  Q
    |||||||||    
T  30915 tttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3540 - 3295
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| | ||||    
T  3540 atacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacatta 3442  T
Q  101 caacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattt 198  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||   || ||||||||||||||||    
T  3441 caacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtcaattt 3344  T
Q  199 tcagaaattatagattat-gattatcgagagatagtctcacccttacct 246  Q
    || ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3343 tccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3868 - 3624
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 100  Q
    ||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||||| | ||||    
T  3868 atacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacatta 3770  T
Q  101 caacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt 199  Q
    ||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||    
T  3769 caacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaatttt 3672  T
Q  200 cagaaattatagattat-gattatcgagagatagtctcacccttacct 246  Q
    | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3671 ccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  58 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 157  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  158 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  58 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 157  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  158 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 254  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 904 - 991
Alignment:
Q  166 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  166 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 806 - 901
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 105  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  9 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 105  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3470 - 3558
Alignment:
Q  1 atacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctga 89  Q
    |||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3470 atacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  137 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 235  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  236 cacccttaccttagttttgc 255  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 40587 - 40521
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 40521  T

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Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 259  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

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Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0019 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 135473 - 135539
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaa 135539  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 22646 - 22582
Alignment:
Q  195 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaa 22582  T

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Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  197 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 259
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  59 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 158  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  159 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 257  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  258 aa 259  Q
    ||    
T  23560 aa 23559  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 680 - 780
Alignment:
Q  160 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 258  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  259 a 259  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  165 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  129 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 227  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  228 gatagtctcacccttacctta 248  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 5487 - 5522
Alignment:
Q  227 agatagtctcacccttaccttagttttgcagaataa 262  Q
    ||||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaataa 5522  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  193 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  177 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 258  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 252  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 246
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  59 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 158  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  159 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 246  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  194 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  165 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 249  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  192 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 248  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 80321 - 80293
Alignment:
Q  234 ctcacccttaccttagttttgcagaataa 262  Q
    |||||||||||||||||||||||||||||    
T  80321 ctcacccttaccttagttttgcagaataa 80293  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 100043 - 100015
Alignment:
Q  234 ctcacccttaccttagttttgcagaataa 262  Q
    |||||||||||||||||||||||||||||    
T  100043 ctcacccttaccttagttttgcagaataa 100015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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