View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19335_high_7 (Length: 344)
Name: NF19335_high_7
Description: NF19335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19335_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 401775 - 402069
Alignment:
| Q |
1 |
ccctctcccattccagcacaacagccacatcccatagccataggcgctatattggcaagacttcagaggtttgttccacctgaaagggttcgaagattga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
401775 |
ccctctcccattccagcacaacagccacatcccatagccataggcgctatattggcaagacttcagaggtttgttccatctgaaagggttcgaagattga |
401874 |
T |
|
| Q |
101 |
gacctataatgtttcgttgaatgaaatctccgaaaaccagcaaatatttattctggcatctcataaatacaatctcgattttattcccagttaaaccagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
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| T |
401875 |
gacctataatgtttcgttgaatgaaatctccgaaaaccagcaaatatttattctggcatctcataaatacaatctcgattttatccacagttaaaccagc |
401974 |
T |
|
| Q |
201 |
cggcttcaagcaattgagagagnnnnnnnnggtcttccaacacccttcaaacacagaaaccaattgtttgggttagcagcctcccagcacaccat |
295 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
401975 |
cggcttcaagcaattgagagagttttttttggtcttccaacacccttcaaacacagaaaccaattgtttgggttagcagcctcccagcacaccat |
402069 |
T |
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