View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19335_low_1 (Length: 923)

Name: NF19335_low_1
Description: NF19335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19335_low_1
NF19335_low_1
[»] chr1 (62 HSPs)
chr1 (218-646)||(14084608-14085037)
chr1 (290-646)||(48722278-48722637)
chr1 (19-276)||(14085033-14085282)
chr1 (296-642)||(50552299-50552647)
chr1 (288-646)||(51110009-51110369)
chr1 (289-646)||(17487191-17487551)
chr1 (287-646)||(10109514-10109876)
chr1 (281-625)||(33124559-33124906)
chr1 (281-646)||(18127845-18128213)
chr1 (361-646)||(30899526-30899814)
chr1 (288-599)||(12884093-12884404)
chr1 (288-645)||(6150503-6150877)
chr1 (318-642)||(29208010-29208333)
chr1 (288-646)||(52055347-52055707)
chr1 (299-644)||(20905196-20905545)
chr1 (338-642)||(25930450-25930755)
chr1 (349-646)||(27703439-27703737)
chr1 (734-918)||(14084336-14084517)
chr1 (281-469)||(20470518-20470706)
chr1 (349-645)||(30004817-30005108)
chr1 (407-646)||(28885579-28885824)
chr1 (349-624)||(12971278-12971539)
chr1 (288-556)||(6333514-6333782)
chr1 (485-646)||(2-163)
chr1 (406-646)||(50371050-50371289)
chr1 (327-483)||(28189229-28189390)
chr1 (30-151)||(14116437-14116559)
chr1 (406-556)||(5560399-5560549)
chr1 (393-646)||(15441193-15441444)
chr1 (352-645)||(1269420-1269704)
chr1 (349-549)||(44836726-44836931)
chr1 (432-554)||(37873762-37873884)
chr1 (359-547)||(3907339-3907528)
chr1 (432-554)||(42740052-42740174)
chr1 (536-646)||(52240444-52240554)
chr1 (415-554)||(17674354-17674492)
chr1 (191-260)||(14076122-14076192)
chr1 (432-554)||(22386837-22386959)
chr1 (419-554)||(24556735-24556870)
chr1 (499-646)||(13120776-13120921)
chr1 (30-148)||(14076231-14076336)
chr1 (59-151)||(14076856-14076949)
chr1 (734-803)||(51109849-51109918)
chr1 (591-646)||(20470713-20470768)
chr1 (464-643)||(9777387-9777565)
chr1 (406-554)||(26486373-26486513)
chr1 (734-788)||(30004673-30004727)
chr1 (432-550)||(38263806-38263924)
chr1 (734-803)||(17487029-17487098)
chr1 (406-511)||(31369432-31369536)
chr1 (738-803)||(50552746-50552811)
chr1 (281-393)||(28886140-28886251)
chr1 (760-803)||(20470884-20470927)
chr1 (734-800)||(48722119-48722185)
chr1 (738-803)||(6150971-6151036)
chr1 (298-389)||(26207184-26207275)
chr1 (754-797)||(30899929-30899972)
chr1 (757-803)||(20905036-20905082)
chr1 (758-803)||(6333020-6333065)
chr1 (739-788)||(12971655-12971704)
chr1 (734-791)||(29207855-29207912)
chr1 (490-535)||(32810370-32810415)
[»] chr4 (44 HSPs)
chr4 (281-646)||(53011506-53011868)
chr4 (281-646)||(19661171-19661535)
chr4 (281-642)||(32130702-32131063)
chr4 (281-646)||(28463496-28463862)
chr4 (290-646)||(11681650-11682008)
chr4 (290-646)||(11689929-11690287)
chr4 (299-646)||(23426074-23426417)
chr4 (281-646)||(41038039-41038406)
chr4 (290-645)||(23256394-23256748)
chr4 (281-646)||(44477829-44478196)
chr4 (288-646)||(27632199-27632554)
chr4 (281-646)||(29221529-29221897)
chr4 (281-521)||(21168847-21169088)
chr4 (395-646)||(16072498-16072754)
chr4 (395-646)||(29579783-29580036)
chr4 (287-632)||(45172568-45172895)
chr4 (389-556)||(21791545-21791712)
chr4 (422-643)||(5545261-5545481)
chr4 (414-554)||(35653980-35654120)
chr4 (289-401)||(39372815-39372927)
chr4 (406-554)||(43154788-43154936)
chr4 (349-554)||(34982097-34982288)
chr4 (406-646)||(22423600-22423840)
chr4 (374-529)||(26329057-26329211)
chr4 (420-556)||(55134138-55134274)
chr4 (432-642)||(10575437-10575642)
chr4 (406-554)||(24449040-24449190)
chr4 (298-409)||(29579655-29579766)
chr4 (735-800)||(29221377-29221442)
chr4 (590-646)||(16887891-16887947)
chr4 (369-446)||(48512330-48512409)
chr4 (734-804)||(41038496-41038566)
chr4 (734-803)||(53011959-53012028)
chr4 (738-804)||(11681491-11681557)
chr4 (738-804)||(11689770-11689836)
chr4 (757-803)||(19661648-19661694)
chr4 (298-389)||(16072220-16072310)
chr4 (734-796)||(28463344-28463405)
chr4 (734-791)||(23256842-23256898)
chr4 (734-791)||(27632643-27632700)
chr4 (349-396)||(55134081-55134127)
chr4 (734-804)||(32130539-32130609)
chr4 (734-788)||(44478284-44478338)
chr4 (514-551)||(51066667-51066704)
[»] chr6 (39 HSPs)
chr6 (290-646)||(2618155-2618511)
chr6 (281-646)||(3514758-3515125)
chr6 (301-646)||(57498-57844)
chr6 (287-642)||(6360558-6360911)
chr6 (287-646)||(6754003-6754362)
chr6 (288-645)||(7525076-7525434)
chr6 (289-646)||(29400939-29401294)
chr6 (375-646)||(12614626-12614895)
chr6 (407-646)||(29149316-29149559)
chr6 (397-644)||(628006-628254)
chr6 (281-469)||(31258543-31258732)
chr6 (287-491)||(24455016-24455220)
chr6 (498-646)||(22503751-22503899)
chr6 (288-556)||(31860815-31861067)
chr6 (349-556)||(1690631-1690824)
chr6 (432-556)||(30915364-30915488)
chr6 (432-554)||(3748568-3748690)
chr6 (298-556)||(19231420-19231678)
chr6 (349-632)||(1092964-1093231)
chr6 (379-556)||(350306-350481)
chr6 (281-379)||(12622136-12622234)
chr6 (281-632)||(29308390-29308724)
chr6 (406-556)||(14893415-14893564)
chr6 (583-646)||(31258480-31258543)
chr6 (384-556)||(11088450-11088613)
chr6 (734-796)||(3514606-3514668)
chr6 (515-646)||(6294279-6294408)
chr6 (496-554)||(21946113-21946171)
chr6 (734-803)||(2618597-2618666)
chr6 (738-801)||(29401387-29401450)
chr6 (760-803)||(31258322-31258365)
chr6 (739-799)||(1092796-1092856)
chr6 (419-483)||(6294208-6294272)
chr6 (734-790)||(22503988-22504044)
chr6 (739-803)||(29308218-29308282)
chr6 (739-790)||(1690481-1690532)
chr6 (411-474)||(7341130-7341193)
chr6 (496-535)||(31234917-31234956)
chr6 (757-790)||(11088836-11088869)
[»] chr3 (49 HSPs)
chr3 (287-646)||(29387662-29388022)
chr3 (281-646)||(8363962-8364329)
chr3 (281-646)||(46791605-46791971)
chr3 (290-646)||(28132644-28133000)
chr3 (281-644)||(41706962-41707329)
chr3 (288-646)||(51939463-51939822)
chr3 (281-646)||(21784691-21785057)
chr3 (288-646)||(24252416-24252776)
chr3 (288-646)||(52655031-52655390)
chr3 (294-646)||(18407995-18408347)
chr3 (287-646)||(23164480-23164838)
chr3 (281-646)||(23067632-23067999)
chr3 (281-646)||(27729677-27730041)
chr3 (287-646)||(6715247-6715595)
chr3 (349-646)||(25598995-25599291)
chr3 (349-645)||(54430412-54430708)
chr3 (340-646)||(13401311-13401616)
chr3 (274-479)||(27110882-27111087)
chr3 (352-556)||(21596199-21596401)
chr3 (288-626)||(48626959-48627279)
chr3 (351-646)||(40152039-40152332)
chr3 (496-646)||(20762055-20762205)
chr3 (361-554)||(36538186-36538375)
chr3 (406-646)||(42009172-42009410)
chr3 (432-554)||(7767005-7767127)
chr3 (406-554)||(27303103-27303251)
chr3 (289-416)||(51064299-51064424)
chr3 (564-646)||(27110780-27110862)
chr3 (349-556)||(1649829-1650040)
chr3 (376-550)||(19965884-19966056)
chr3 (446-547)||(1255057-1255158)
chr3 (497-627)||(15987207-15987336)
chr3 (462-554)||(46904714-46904806)
chr3 (420-535)||(43905862-43905977)
chr3 (432-640)||(51146880-51147085)
chr3 (496-554)||(50677314-50677372)
chr3 (734-803)||(6715683-6715752)
chr3 (739-803)||(28132485-28132549)
chr3 (441-555)||(4207357-4207465)
chr3 (734-804)||(52654872-52654942)
chr3 (738-791)||(23164334-23164387)
chr3 (734-796)||(8364417-8364479)
chr3 (734-788)||(25598848-25598902)
chr3 (734-788)||(27110636-27110690)
chr3 (421-474)||(40501273-40501326)
chr3 (757-803)||(13401725-13401771)
chr3 (734-804)||(21784530-21784599)
chr3 (734-799)||(46791451-46791514)
chr3 (758-803)||(54430817-54430862)
[»] chr8 (42 HSPs)
chr8 (287-646)||(7857883-7858241)
chr8 (287-645)||(18420518-18420879)
chr8 (288-645)||(13585098-13585454)
chr8 (290-646)||(43967978-43968334)
chr8 (288-645)||(44664955-44665308)
chr8 (281-646)||(43926231-43926597)
chr8 (281-645)||(3471384-3471755)
chr8 (349-643)||(32098090-32098383)
chr8 (287-594)||(42951725-42952042)
chr8 (392-646)||(18112011-18112273)
chr8 (281-627)||(34523879-34524208)
chr8 (289-470)||(3445481-3445661)
chr8 (281-608)||(27074376-27074692)
chr8 (290-556)||(5869320-5869579)
chr8 (412-554)||(3628747-3628889)
chr8 (488-646)||(1004056-1004213)
chr8 (420-624)||(23567205-23567408)
chr8 (420-624)||(12531489-12531692)
chr8 (348-626)||(39697867-39698130)
chr8 (380-556)||(30915285-30915465)
chr8 (281-393)||(18111605-18111717)
chr8 (360-455)||(1003958-1004055)
chr8 (406-554)||(35874840-35874990)
chr8 (349-643)||(29372227-29372508)
chr8 (349-646)||(42777610-42777900)
chr8 (349-450)||(41666040-41666141)
chr8 (436-554)||(2545921-2546038)
chr8 (377-556)||(33452677-33452858)
chr8 (734-804)||(43926075-43926145)
chr8 (734-801)||(1004302-1004369)
chr8 (734-804)||(7858329-7858399)
chr8 (734-799)||(3445777-3445842)
chr8 (734-803)||(13585550-13585619)
chr8 (734-803)||(18420356-18420425)
chr8 (508-642)||(36515069-36515202)
chr8 (496-547)||(42076114-42076165)
chr8 (734-797)||(44664360-44664423)
chr8 (389-431)||(3575170-3575212)
chr8 (757-791)||(42951557-42951591)
chr8 (348-400)||(12531432-12531482)
chr8 (349-397)||(23567418-23567464)
chr8 (734-791)||(27074718-27074775)
[»] chr2 (53 HSPs)
chr2 (288-646)||(45618774-45619132)
chr2 (281-646)||(26151655-26152020)
chr2 (290-643)||(7993433-7993786)
chr2 (287-646)||(18676218-18676579)
chr2 (288-646)||(41096445-41096806)
chr2 (281-646)||(42411466-42411831)
chr2 (290-646)||(19367327-19367683)
chr2 (281-646)||(13020212-13020579)
chr2 (287-643)||(25222119-25222476)
chr2 (289-646)||(36481204-36481550)
chr2 (287-646)||(4855786-4856149)
chr2 (287-642)||(6530456-6530811)
chr2 (287-639)||(42759671-42760015)
chr2 (298-646)||(2063616-2063961)
chr2 (343-646)||(12269279-12269580)
chr2 (290-645)||(45042187-45042545)
chr2 (395-625)||(34061789-34062015)
chr2 (349-624)||(18172871-18173130)
chr2 (361-643)||(31273078-31273357)
chr2 (281-624)||(15457308-15457634)
chr2 (361-554)||(39081271-39081462)
chr2 (412-554)||(1418832-1418973)
chr2 (349-632)||(17117568-17117828)
chr2 (420-624)||(21747161-21747364)
chr2 (363-556)||(36059903-36060095)
chr2 (420-620)||(38985644-38985842)
chr2 (349-556)||(18916052-18916245)
chr2 (351-556)||(1226264-1226465)
chr2 (421-556)||(27302526-27302661)
chr2 (376-554)||(13997204-13997378)
chr2 (349-554)||(38599261-38599466)
chr2 (734-803)||(41096290-41096359)
chr2 (406-626)||(13001560-13001772)
chr2 (414-554)||(29480637-29480777)
chr2 (349-550)||(9029472-9029664)
chr2 (734-803)||(26151498-26151567)
chr2 (734-802)||(42759507-42759575)
chr2 (734-803)||(2064049-2064118)
chr2 (734-803)||(4856237-4856306)
chr2 (734-803)||(18676060-18676129)
chr2 (734-791)||(34061628-34061685)
chr2 (734-803)||(45042635-45042704)
chr2 (734-803)||(45619220-45619289)
chr2 (361-488)||(32186216-32186342)
chr2 (734-791)||(6530906-6530963)
chr2 (734-803)||(13020666-13020735)
chr2 (734-803)||(19367175-19367244)
chr2 (739-803)||(17117396-17117460)
chr2 (739-802)||(21746983-21747046)
chr2 (734-801)||(36481639-36481706)
chr2 (349-400)||(38985849-38985899)
chr2 (604-646)||(9029707-9029749)
chr2 (739-800)||(15457751-15457812)
[»] chr7 (51 HSPs)
chr7 (287-646)||(33909863-33910220)
chr7 (296-646)||(18015488-18015839)
chr7 (288-646)||(46221611-46221969)
chr7 (288-646)||(42161030-42161389)
chr7 (288-646)||(36796279-36796636)
chr7 (281-646)||(33419025-33419390)
chr7 (281-646)||(6379992-6380358)
chr7 (338-646)||(11672431-11672742)
chr7 (324-625)||(4099801-4100104)
chr7 (290-556)||(8358292-8358558)
chr7 (288-646)||(44893937-44894299)
chr7 (349-645)||(7636234-7636536)
chr7 (287-476)||(12251466-12251655)
chr7 (477-646)||(12251196-12251365)
chr7 (290-450)||(38524984-38525145)
chr7 (386-645)||(32956670-32956929)
chr7 (281-556)||(26282540-26282799)
chr7 (406-646)||(26633279-26633517)
chr7 (288-544)||(25061702-25061957)
chr7 (349-556)||(40001694-40001887)
chr7 (359-646)||(41908046-41908332)
chr7 (305-643)||(773795-774121)
chr7 (349-645)||(40841155-40841454)
chr7 (411-645)||(36438262-36438494)
chr7 (349-646)||(30738986-30739278)
chr7 (361-554)||(9479002-9479191)
chr7 (420-599)||(1365939-1366117)
chr7 (356-551)||(40737994-40738187)
chr7 (406-554)||(18895397-18895545)
chr7 (411-626)||(44876087-44876292)
chr7 (288-387)||(27432390-27432489)
chr7 (383-643)||(41852212-41852469)
chr7 (423-646)||(42311943-42312163)
chr7 (406-646)||(3799671-3799906)
chr7 (734-803)||(33910309-33910378)
chr7 (415-554)||(7366612-7366751)
chr7 (734-803)||(44893778-44893847)
chr7 (349-646)||(28590053-28590347)
chr7 (734-804)||(6379834-6379904)
chr7 (734-803)||(42160873-42160942)
chr7 (734-790)||(4100205-4100261)
chr7 (515-632)||(25610091-25610207)
chr7 (734-803)||(12251034-12251104)
chr7 (738-788)||(32957016-32957066)
chr7 (734-803)||(11672835-11672904)
chr7 (734-791)||(36796134-36796191)
chr7 (281-342)||(44877006-44877067)
chr7 (349-400)||(25609964-25610014)
chr7 (757-803)||(44875910-44875956)
chr7 (349-400)||(1365882-1365932)
chr7 (739-804)||(1366258-1366323)
[»] scaffold0126 (2 HSPs)
scaffold0126 (287-646)||(16501-16866)
scaffold0126 (734-798)||(16955-17019)
[»] chr5 (45 HSPs)
chr5 (281-646)||(13423651-13424020)
chr5 (290-646)||(13474427-13474786)
chr5 (338-646)||(13656056-13656366)
chr5 (289-643)||(12661102-12661462)
chr5 (289-642)||(26377685-26378042)
chr5 (288-646)||(19099222-19099582)
chr5 (281-551)||(36718570-36718841)
chr5 (290-494)||(8398778-8398985)
chr5 (281-632)||(43511425-43511759)
chr5 (338-646)||(26311853-26312144)
chr5 (354-646)||(27351212-27351504)
chr5 (349-623)||(17513868-17514138)
chr5 (287-597)||(42291839-42292131)
chr5 (289-632)||(29156004-29156331)
chr5 (389-646)||(40956217-40956468)
chr5 (420-556)||(10591271-10591407)
chr5 (349-632)||(4734505-4734772)
chr5 (412-554)||(138066-138208)
chr5 (420-626)||(5829315-5829518)
chr5 (348-632)||(20975855-20976126)
chr5 (384-537)||(8379538-8379691)
chr5 (425-646)||(40779127-40779345)
chr5 (374-547)||(23069102-23069277)
chr5 (420-620)||(3349664-3349862)
chr5 (436-630)||(931326-931514)
chr5 (433-550)||(10033489-10033607)
chr5 (491-554)||(18873458-18873521)
chr5 (423-645)||(17325777-17325998)
chr5 (734-803)||(13474875-13474944)
chr5 (406-554)||(16515440-16515588)
chr5 (496-646)||(7390311-7390458)
chr5 (584-646)||(37046875-37046937)
chr5 (496-646)||(33281680-33281829)
chr5 (734-803)||(36718379-36718448)
chr5 (734-803)||(37047027-37047096)
chr5 (734-801)||(12661552-12661619)
chr5 (757-803)||(13424132-13424178)
chr5 (734-802)||(26312231-26312299)
chr5 (739-790)||(931618-931669)
chr5 (755-801)||(10591028-10591074)
chr5 (339-428)||(40778695-40778785)
chr5 (569-646)||(8379352-8379428)
chr5 (734-791)||(13656456-13656512)
chr5 (602-643)||(23069335-23069376)
chr5 (757-790)||(41612990-41613023)
[»] scaffold0100 (1 HSPs)
scaffold0100 (298-645)||(46084-46429)
[»] scaffold0181 (3 HSPs)
scaffold0181 (380-646)||(17040-17307)
scaffold0181 (287-388)||(18128-18229)
scaffold0181 (734-791)||(16896-16953)
[»] scaffold0564 (2 HSPs)
scaffold0564 (397-646)||(979-1217)
scaffold0564 (758-803)||(1330-1375)
[»] scaffold0035 (2 HSPs)
scaffold0035 (281-470)||(22847-23038)
scaffold0035 (515-646)||(22713-22844)
[»] scaffold0606 (1 HSPs)
scaffold0606 (424-550)||(8399-8525)


Alignment Details
Target: chr1 (Bit Score: 345; Significance: 0; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 218 - 646
Target Start/End: Complemental strand, 14085037 - 14084608
Alignment:
Q  218 taatgttagttctcataaaaaagtcaagctcatcatcgtatgagaagtacaaggtaataggctggccctgccttgagggtgtgcaaggtgctcaactaga 317  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||    
T  14085037 taatattagttctcataaaaaagtcaagctcatcatcgtatgagaagtacaaggtaatacggaggccctgccttgagggtgtgcaaggtgctcaaccaga 14084938  T
Q  318 ccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttc 417  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14084937 ccggacctccaaatgttacgggcctttaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttc 14084838  T
Q  418 agtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtca 517  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14084837 agtacaggtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaaaatgtataatcacttaatcagtca 14084738  T
Q  518 atttggaaagctatttcattgaaagaatcacaacaatc-annnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatc 616  Q
    |||| |||||||||||||||||||||||||||| |||| |       |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  14084737 atttagaaagctatttcattgaaagaatcacaataatcaatttttttcttcgcataaaccattcgttttacccttctccacaacagaggagtgacaaatc 14084638  T
Q  617 caaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||||||||||||    
T  14084637 caaacgacaccattagataaatttcacctc 14084608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 48722637 - 48722278
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||| ||||||||| || |||| |||||||||| ||| |||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  48722637 ttgagggtgtgcaaagtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatatccaccccccacttaaataaaaaa 48722538  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaatttttt---ctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||   |||||||||| ||||| |||||||||||||||| |||||||||||| ||    
T  48722537 tatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatcaaacca 48722438  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       |||| ||||||||||||||||||    
T  48722437 cccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcatttttttcttcgcataaaccattcgtttta 48722338  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  48722337 cccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 48722278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 14085282 - 14085033
Alignment:
Q  19 ctttgcctaccaagttacgatgtgggactttctacgactgtttgttctaaaaatcaacacagcgaaaacactatcaagagtcacaatgtggagcttcttt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085282 ctttgcctaccaagttacgatgtgggactttctacgactgtttgttctaaaaatcaacacagcgaaaacactatcaagagtcacaatgtggagcttcttt 14085183  T
Q  119 tttgttatcaagagacaccttaagtccttatcaagttatcaagccatttttaattaatttgtaattggtattttctagaaaccaaaatacacaaaaactt 218  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085182 tttgttatcaagagacaccttaagtccttat--------caagccatttttaattaatttgtaattggtattttctagaaaccaaaatacacaaaaactt 14085091  T
Q  219 aatgttagttctcataaaaaagtcaagctcatcatcgtatgagaagtacaaggtaata 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085090 aatgttagttctcataaaaaagtcaagctcatcatcgtatgagaagtacaaggtaata 14085033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 296 - 642
Target Start/End: Original strand, 50552299 - 50552647
Alignment:
Q  296 gtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa-tatat 394  Q
    |||||||||||||||||| ||||| |  ||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  50552299 gtgtgcaaggtgctcaaccagaccaggtctccaaatgctatggacctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaaatatat 50552398  T
Q  395 atgttatatcattttctttcttcagtacacgtttgaattttttc-tagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaa 493  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  50552399 atgttatatcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaa 50552498  T
Q  494 tatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccctttt 593  Q
    | ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||       ||||  ||||||||||| ||||||| ||||    
T  50552499 tttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcattttaccttttt 50552598  T
Q  594 ccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  50552599 ccacaacataggagtgacaaatccaaacgacaccattagataaatttca 50552647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 51110369 - 51110009
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||| |||||||||||| || |||| |||||||||| ||| |||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  51110369 ccttgagggtgtgtaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacctaccacccacttaaataaaa 51110270  T
Q  388 aa-tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    || ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||||||||| |    
T  51110269 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcctatcaaacc 51110170  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |       |||| ||||||||||| |||||    
T  51110169 acccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaataagttttttcttcgcataaaccatttgtttt 51110070  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    | |||||||||||| | ||||||||||||| |||| |||||| ||||||||||||||||||    
T  51110069 atccttttccacaacaaaggagtgacaaattcaaatgacaccgttagataaatttcacctc 51110009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 289 - 646
Target Start/End: Complemental strand, 17487551 - 17487191
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    |||||||||||||||||| |||||| |  |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17487551 cttgagggtgtgcaaggtcctcaaccaagccgggcctccaaatgatacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 17487452  T
Q  389 atatatatgttatatcattttctttcttcagt--acacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||  ||||||||||| |||  |||| ||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||| |    
T  17487451 atatatatgttatattcttttctttctttagtgtacacatttgagtttttttctagactctagttctcctttttttacataaatcggatcctatcaaacc 17487352  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| | |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||       |||  |||||||||||||||||    
T  17487351 acccctaatttatataatcacttaataaatcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttctttgcataaaccattcgtttt 17487252  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    | |||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||    
T  17487251 atccttttccacaacagaggagtgacaaatccaaacaacgccgttagataaatttcacctc 17487191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 10109514 - 10109876
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||||||||||||||||||||||  |||  |||  ||||  ||| || ||| ||||||||||||||||||||| |||||| |||||||||||||    
T  10109514 gccttgagggtgtgcaaggtgctcaactaagccgagcctttaaatactacgggtctcaaacgaaaaattaaatctaatatccaccccccacttaaataaa 10109613  T
Q  387 aaatata-tatgttatatcattttctttcttcagtacacgtttgaatttt--ttctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    ||| | | |||||||||||||||||||| || | ||||||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  10109614 aaaaaaaatatgttatatcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatcaaa 10109713  T
Q  484 tcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtt 583  Q
     |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||| ||||||| |||||||    
T  10109714 ccaccactaatttgtataatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatcatttttttcttcgcataaactattcgtt 10109813  T
Q  584 ttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  10109814 ttacccttttccacaacagaggagtgacaaatccaaacgacgccgttagataaatttcacctc 10109876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 281 - 625
Target Start/End: Complemental strand, 33124906 - 33124559
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||||||||||||||||||||||||||||||  || | || |||||||| | ||| |||||||||||||||||||||| ||||||||| || | |||||    
T  33124906 ggccctgccttgagggtgtgcaaggtgctcaatcaggctgggcctccaaacgctacgggcctctaacgaaaaattaaatttaatacccatccccaactta 33124807  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactc--tagttctcctttttgtacataaatctgatcct 477  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||| |||||||  |||||||||||||| |||||||||| ||||||    
T  33124806 aataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcct 33124707  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    || ||| |||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||    
T  33124706 attaaaccacctctaatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcacataaacca 33124607  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgaca 625  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||    
T  33124606 ttcgttataccattttccacaacagaggagtgacaaatccaaacgaca 33124559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 18128213 - 18127845
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || |||| |||| ||||| ||| | |||||||||||||||||||| ||||||||| || |||||||    
T  18128213 ggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctctaaatgctacggacctctaacgaaaaattaaatttaatacccagcccccactta 18128114  T
Q  381 aataaa--aaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatcc 476  Q
    ||||||  ||| |||||||||||||||||||||||||| ||||||||||||| ||||||  ||||| ||||||||||||||| |||| |||||| |||||    
T  18128113 aataaataaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttctagattctagttctcctttt-gtacgtaaatcggatcc 18128015  T
Q  477 tatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacc 576  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |       |||| |||||||     
T  18128014 tatcaaaccacccataatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaattatttttttcttcgcataaact 18127915  T
Q  577 attcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||||| |||||    
T  18127914 attcgttttacccttttccacaacaaaggagtgacaaatccaaacgacaccgttaggtaaattttacctc 18127845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 361 - 646
Target Start/End: Original strand, 30899526 - 30899814
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttt--ttctagactctagttctcctttt 458  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||    
T  30899526 taatacccaccc-ccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcctttt 30899624  T
Q  459 tgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-- 556  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||      
T  30899625 tgtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcatt 30899724  T
Q  557 nnnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
           |||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  30899725 tttttttcttcgcataaaccattcgttttacccttttccacaacagaggaatgacaaatccaaacgacaccgttagataaatttcacctc 30899814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 288 - 599
Target Start/End: Complemental strand, 12884404 - 12884093
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||| ||||| |||||||||  ||| |||||| ||| ||| | |||||||||||||||||||||||||| ||| || | ||||||||||||    
T  12884404 ccttgagggtgtgtaaggtactcaactaggtcgggcctccacatgctacggacctctaacgaaaaattaaatctaatatccaacccctacttaaataaaa 12884305  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||    
T  12884304 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaacca 12884205  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||    
T  12884204 cccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatca-ttttttcttcgcataaaccattcgtttta 12884106  T
Q  587 cccttttccacaa 599  Q
    |||||||| ||||    
T  12884105 cccttttctacaa 12884093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 288 - 645
Target Start/End: Original strand, 6150503 - 6150877
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||||||||||||||||||  || |||| | |||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||| |     
T  6150503 ccttgagggtgtgcaaggtgctcaatcaggccgggcttccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctacttaaatatat 6150602  T
Q  388 a---------------atatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatct 471  Q
    |               |||||||||||||||  ||||||||||||  || |||||||| |||| |||||||||||||||||||||||||||||||||||     
T  6150603 atatatatatatatatatatatatgttatattcttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatca 6150702  T
Q  472 gatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacat 571  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||    
T  6150703 gatcctatcaaaccacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcaattttttcttcacat 6150802  T
Q  572 aaaccattcgttttacc-cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  6150803 aaaccattcgttttaccttttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacct 6150877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 318 - 642
Target Start/End: Complemental strand, 29208333 - 29208010
Alignment:
Q  318 ccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttc 417  Q
    ||||||||||||||  ||   ||||| ||| ||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  29208333 ccggacctccaaattatatgagcctcaaacaaaaaattaagtctaatactcaccc-ccacttaaataaaaaa-atatatgttatatccttttctttcttc 29208236  T
Q  418 agtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtc 516  Q
     ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||| |||||||||| ||||||||||    
T  29208235 ggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcatttaatcagtc 29208136  T
Q  517 aatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatc 616  Q
    ||| |||||  |||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29208135 aatctggaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatc 29208036  T
Q  617 caaacgacaccattagataaatttca 642  Q
    |||| |||||| || |||||||||||    
T  29208035 caaatgacaccgttggataaatttca 29208010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 288 - 646
Target Start/End: Original strand, 52055347 - 52055707
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa- 386  Q
    ||||| ||| |||||||||||||||| || |||  |||||||||| ||  || ||| ||  ||||||||| |||||||||||| | |||||||||| ||     
T  52055347 ccttgggggagtgcaaggtgctcaaccaggccgagcctccaaatgctatgggtctcaaataaaaaattaagtctaatacccactccccacttaaatgaat 52055446  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttct--agactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    ||| ||||||||||||||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||||||||||||||||| ||| |||||||     
T  52055447 aaaaatatatgttatatcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatcatatcaaac 52055546  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
     | || |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  52055547 tatccataatttatataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatcagtttttccttcgcataaaccattcgttt 52055646  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||| |||||    
T  52055647 tacccttttacacaa-agaggagtgacaaatctaaacgacaccgttagataaattttacctc 52055707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 299 - 644
Target Start/End: Complemental strand, 20905545 - 20905196
Alignment:
Q  299 tgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaata-tatatg 397  Q
    ||||||||| ||||  || |||| ||||||||||| |  || ||| ||| ||||||||| |||||||| ||||| | |||||||||||||| | ||||||    
T  20905545 tgcaaggtgatcaatcaggccgggcctccaaatgtcatgggtctcaaacaaaaaattaagtctaatactcacccccgacttaaataaaaaaaaatatatg 20905446  T
Q  398 ttatatcattttctttcttcagtacacgtttgaatttt--ttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaata 495  Q
    ||||||  ||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||     
T  20905445 ttatattcttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatt 20905346  T
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccc-ttttc 594  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| |       ||||  |||||||||||||||||||| |||||    
T  20905345 tgtataatcacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgtataaaccattcgttttaccctttttc 20905246  T
Q  595 cacaagagaggagtgacaaatccaaacgacaccattagataaatttcacc 644  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  20905245 cacaacagaggagtgacaaatccaaacgacaccgttggataaatttcacc 20905196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 338 - 642
Target Start/End: Original strand, 25930450 - 25930755
Alignment:
Q  338 ggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt 437  Q
    |||||| ||| |||| |||| | ||||||||||||||||||||||||||||| | || ||| ||||| |||||||| ||| |||||||||||| ||||||    
T  25930450 ggcctcaaacaaaaatttaagtttaatacccaccctccacttaaataaaaaaaaaatgtgtgatatccttttcttttttcggtacacgtttgagtttttt 25930549  T
Q  438 --ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
      |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  25930550 gtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataatcacttaatcagtcaacttgaaaagctatttca 25930649  T
Q  536 ttgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagata 635  Q
    ||||||| |||||||||||||       |||   |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  25930650 ttgaaaggatcacaacaatca-ttttttctttggataaaccatttgttttacccttttccacaacagatgagtgacaaatccaaacgacaccgttagata 25930748  T
Q  636 aatttca 642  Q
    |||||||    
T  25930749 aatttca 25930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 349 - 646
Target Start/End: Complemental strand, 27703737 - 27703439
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaat---aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactc 445  Q
    ||||||||| |||||||||||||| ||||||||||   |||||||||||||||||  || ||||||||||| ||||||||||||| ||||||||||||||    
T  27703737 aaaaattaagtctaatacccaccccccacttaaattaaaaaaaatatatatgttacttctttttctttctttagtacacgtttgagttttttctagactc 27703638  T
Q  446 tagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat 545  Q
    |||||||| |||||| |||||||| |||| |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27703637 tagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaat 27703538  T
Q  546 cacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||||||||||        ||| ||||||||||||||||| ||||||||||| |  || ||||||| ||||||||||||||  |||| ||||||||||||    
T  27703537 cacaacaatcatttcatt-ttcgcataaaccattcgtttttcccttttccaccacggaagagtgac-aatccaaacgacactgttaggtaaatttcacct 27703440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 734 - 918
Target Start/End: Complemental strand, 14084517 - 14084336
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccctagtaataggaaaagaaacacaaatccatga 833  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  14084517 ttacgttttattttattataggtctattttaaaaagagagccgagcctcctattttactgggacggctctagtaataggaaaagaaacacaaatccatga 14084418  T
Q  834 ccatggcacccccaatacttgccaacatcaacacccccttcaccctctgtcgtcgcgcttctgtcactatcatattcatttgcct 918  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  14084417 ccagggcatccccaatacttgccaacatcaacacccccttcaccctct---gtcgcgcttctatcactatcatattcatttgcct 14084336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 281 - 469
Target Start/End: Original strand, 20470518 - 20470706
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||    
T  20470518 ggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacata 20470617  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaat 469  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  20470618 aataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 349 - 645
Target Start/End: Complemental strand, 30005108 - 30004817
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt---ctagactc 445  Q
    ||||||||| |||||||||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||| |||||||||||| ||||||   ||||||||    
T  30005108 aaaaattaagtctaatacccacctcccatttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagtttttttttctagactc 30005010  T
Q  446 tagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat 545  Q
    || |||||||||||||||||||||| ||||||||||||      | ||| |||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  30005009 tacttctcctttttgtacataaatccgatcctatcaaa------ccaatttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaat 30004916  T
Q  546 cacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    | |||||||||       |||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  30004915 cgcaacaatca-tttgttcttcccataaaccattcgttttacctttttccacaacagaggagtgacaaattcaaacgataccgttagataaatttcacct 30004817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 407 - 646
Target Start/End: Complemental strand, 28885824 - 28885579
Alignment:
Q  407 tttctttcttcagtacacgtttgaattttttctag----actctagttctccttttt--gtacataaatctgatcctatcaaatcacccctaatatgtat 500  Q
    |||||||||| ||||||||||||| |||||| |      |||||||||||| |||||  || |||||||| |||||||||||| ||||| |||| |||||    
T  28885824 tttctttctttagtacacgtttgagttttttttttttttactctagttctcttttttttgtgcataaatcggatcctatcaaaccacccataatttgtat 28885725  T
Q  501 aatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaag 600  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||       |||| |||||||||||||||||| | ||||||||||     
T  28885724 aatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaatcatttttttcttcgcataaaccattcgttttatctttttccacaac 28885625  T
Q  601 agaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  28885624 agatgagtgacaaatccaaacgacaccgttagataaatttcacctc 28885579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 349 - 624
Target Start/End: Original strand, 12971278 - 12971539
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||    
T  12971278 aaaaattaactctaatacccaccccccacttaaataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttag 12971364  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| | || |||||||||||||  ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  12971365 ttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatcgaaagaatcac 12971464  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgac 624  Q
    ||||||||        ||||||||||||||||||||| |||||| ||||||  ||  |||||||||||||||||||    
T  12971465 aacaatcatttcttt-ttcacataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaacgac 12971539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 288 - 556
Target Start/End: Complemental strand, 6333782 - 6333514
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||| ||||||||||||| |  ||  ||||||||||||||||||| ||||| ||| ||||||||  |||||||  || || ||| ||||||||||    
T  6333782 ccttgagggagtgcaaggtgctctaacagggcggacctccaaatgttacaagcctcaaacaaaaaattatgtctaatattcatcccccatttaaataaaa 6333683  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    || ||||||||||  |  |||||||||||| |||||||||||| ||||| | ||||||||||||||| ||  |||||||||||||||| |||||||| ||    
T  6333682 aaaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatcaaacca 6333583  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
      |||||| |||| |||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||    
T  6333582 -tcctaatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatca 6333514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 485 - 646
Target Start/End: Original strand, 2 - 163
Alignment:
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    ||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  2 cacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttt 101  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  102 tacccttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 406 - 646
Target Start/End: Original strand, 50371050 - 50371289
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    ||||||||||||| ||| | |||| |||| |||||||||||||||||||||| || | |||||  |||| ||||||||||||||  ||| ||||||||||    
T  50371050 ttttctttcttcaatacgcatttggatttcttctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatca 50371149  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagagg 605  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||        ||| |||||| |||| ||||| |||||  ||||||  ||||    
T  50371150 cttaatcagtcaatttgaaaaactgtttcattgaaagaatcacaacaatcatttcttt-ttcgcataaatcattagtttttcccttacccacaacggagg 50371248  T
Q  606 agtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||| ||| | |||| |||||||||||||    
T  50371249 agtgacaaatccaaacaacatcgttaggtaaatttcacctc 50371289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 327 - 483
Target Start/End: Original strand, 28189229 - 28189390
Alignment:
Q  327 caaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa-----tatatatgttatatcattttctttcttcagta 421  Q
    |||||| ||| || ||| ||| |||||| || |||||||||||||| ||||||||||||||||     ||||||||||||||||||||||||||||| ||    
T  28189229 caaatgctacgggtctcaaacaaaaaatcaagtctaatacccaccccccacttaaataaaaaagaatatatatatgttatatcattttctttcttcaata 28189328  T
Q  422 cacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  28189329 cacgtttgagttttttttagactttagttctcctttttgtacataaatctgatcctatcaaa 28189390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 14116559 - 14116437
Alignment:
Q  30 aagttacgatgtgggactttctacgactgtttgttctaaaaatcaacacagcg-aaaacactatcaagagtcacaatgtggagcttcttttttgttatca 128  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  14116559 aagttacgatgtgggactttgttcaactgtttgttctaaaaatcaacactgcgtaaaacgctatcaagagtcacgatgtggagcttcttttttgttatca 14116460  T
Q  129 agagacaccttaagtccttatca 151  Q
    |||||||||||||||||||||||    
T  14116459 agagacaccttaagtccttatca 14116437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 406 - 556
Target Start/End: Original strand, 5560399 - 5560549
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||||||||||||||||||||||||  ||||| |||||| |||||||| ||| || ||||||||||| | ||| |||| |||||| ||| ||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttttagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatca 5560498  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  5560499 cttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatca 5560549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 393 - 646
Target Start/End: Original strand, 15441193 - 15441444
Alignment:
Q  393 atatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcaccccta 492  Q
    ||||||||  || ||||||||||||  ||||||||||| |||||||||||||||||||||||||| |  |||||||| | || |||||||| ||||   |    
T  15441193 atatgttacttctttttctttcttcgatacacgtttgagttttttctagactctagttctcctttctagacataaatataatgctatcaaaccacctaca 15441292  T
Q  493 atatgtataatcacttaatcagtcaatttggaaagctatttcatt-gaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccctt 591  Q
    || |||||||||||||||||| |||||||  ||||||||||||||  |||||||||||||||| |        ||  |||||| ||||| |||| |||||    
T  15441293 atttgtataatcacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaataattcttt--tttgcataaatcattcatttt-ccctt 15441389  T
Q  592 ttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||| ||| |||||||||||||||||||| || |||| |||||||||||||    
T  15441390 ttccacaacagaagagtgacaaatccaaacgacgccgttaggtaaatttcacctc 15441444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 352 - 645
Target Start/End: Original strand, 1269420 - 1269704
Alignment:
Q  352 aattaaatctaatacccaccctccacttaaataaaaa-atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagtt 450  Q
    |||||| ||||||| |||| |  |||||||||||||| ||||||||||| | || |||||||| ||| |||||||||||| |||||||||||||||| ||    
T  1269420 aattaagtctaatatccacacctcacttaaataaaaatatatatatgttttttctttttcttttttctgtacacgtttgagttttttctagactctaatt 1269519  T
Q  451 ctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaa 550  Q
    ||||||| |  ||||||||||||| |||| ||| |||||| ||| ||||         ||| |||||||||| |||||||||||||| ||||||||||||    
T  1269520 ctcctttctagacataaatctgatgctatgaaaccacccccaatttgta--------aaattagtcaatttgaaaagctatttcattaaaagaatcacaa 1269611  T
Q  551 caatcannnnnnncttcacataaaccattcgttttacccttttccacaag-agaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    ||||||       |  || |||   ||||||||||  ||||| |||||||  |||||||||||||||||||||||||| ||   ||||||||||||    
T  1269612 caatcatttttttccgcatata---cattcgttttctcctttcccacaagcggaggagtgacaaatccaaacgacaccgttccgtaaatttcacct 1269704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 349 - 549
Target Start/End: Complemental strand, 44836931 - 44836726
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt------ctaga 442  Q
    ||||||||| | ||||| | |||| |||||||||| ||||   || ||||||  |||||||||||||||  ||||||| ||| ||||||      |||||    
T  44836931 aaaaattaagtataatatctaccc-ccacttaaattaaaatattacatgttacttcattttctttcttcgatacacgtatgagttttttttctttctaga 44836833  T
Q  443 ctctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaag 542  Q
     ||||||||| |||| || |||||||| |||| |||||||| ||||   ||| ||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  44836832 ttctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcactgaaag 44836733  T
Q  543 aatcaca 549  Q
    |||||||    
T  44836732 aatcaca 44836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 432 - 554
Target Start/End: Complemental strand, 37873884 - 37873762
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||||||||||||| |||| |  |||||||| |||| |||||||| ||||   ||| |||||| ||||||||||||| |||||| ||| || |    
T  37873884 ttttttctagactctagttctactttctagacataaatttgatgctatcaaaccaccatcaatttgtatagtcacttaatcagttaatttgaaaaactgt 37873785  T
Q  532 ttcattgaaagaatcacaacaat 554  Q
    |||||||||||||||||||||||    
T  37873784 ttcattgaaagaatcacaacaat 37873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 359 - 547
Target Start/End: Original strand, 3907339 - 3907528
Alignment:
Q  359 tctaatacccaccctccacttaaat--aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctt 456  Q
    ||||||| |||||||||||||||||  |||||| | ||||||||  || |||||||| || ||||||||||| | |||||| |||||| || || | |||    
T  3907339 tctaatatccaccctccacttaaattaaaaaaaaaaatatgttacttctttttctttttttagtacacgtttaagttttttttagactttattttttctt 3907438  T
Q  457 tttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
    | || ||||||||  |||  ||||||| ||| || ||| |||||||||| ||||||| |||||||| |||  |||||||||||||||||||    
T  3907439 tatgaacataaatacgatggtatcaaaccactcc-aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 432 - 554
Target Start/End: Original strand, 42740052 - 42740174
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||||||||||||| |||| || |||||| | |||| ||||||||  |||   ||| |||||||| ||||||| |||||||||| ||| ||||    
T  42740052 ttttttctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactat 42740151  T
Q  532 ttcattgaaagaatcacaacaat 554  Q
    ||||||||||||||| |||||||    
T  42740152 ttcattgaaagaatcgcaacaat 42740174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 536 - 646
Target Start/End: Complemental strand, 52240554 - 52240444
Alignment:
Q  536 ttgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagata 635  Q
    |||||||||||||||||||||       |||| |||||| ||||| |||| ||||||||||||| ||||||| ||||||| ||||||||||  |||||||    
T  52240554 ttgaaagaatcacaacaatcatttttttcttcgcataaatcattcattttgcccttttccacaacagaggagcgacaaattcaaacgacactgttagata 52240455  T
Q  636 aatttcacctc 646  Q
    |||||||||||    
T  52240454 aatttcacctc 52240444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17674492 - 17674354
Alignment:
Q  415 ttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcag 514  Q
    |||||||||||| ||| ||||| |||||||||||||   |||| |  | |||||| |||| |||| ||| ||||   ||| || ||||||||||||||||    
T  17674492 ttcagtacacgtatgagttttt-ctagactctagtttcactttctagatataaatttgatgctattaaaccaccatcaatttgaataatcacttaatcag 17674394  T
Q  515 tcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  17674393 tcaatttgaaaaactatttcattgaaagaatcacaacaat 17674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 14076192 - 14076122
Alignment:
Q  191 ttctagaaaccaaaatacacaaaaacttaatgt-tagttctcataaaaaagtcaagctcatcatcgtatga 260  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||    
T  14076192 ttctagaaaccaaaatacacaaaaactcaatgtctagttctgataaaaaaatcaagctcatcatcgtatga 14076122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 432 - 554
Target Start/End: Complemental strand, 22386959 - 22386837
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||||||||||||  || | || |||||||| |||| ||||  || ||||   ||| || | |||||||||||||||||||||| ||| ||||    
T  22386959 ttttttctagactctagttccactgtctggacataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatcagtcaatttgaaaaactat 22386860  T
Q  532 ttcattgaaagaatcacaacaat 554  Q
    |||||||||||||||||||||||    
T  22386859 ttcattgaaagaatcacaacaat 22386837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 419 - 554
Target Start/End: Original strand, 24556735 - 24556870
Alignment:
Q  419 gtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaa 518  Q
    |||||||| ||| |||||||||||||||| |||  |||| |  |||||||| || | |||| ||| ||||   ||| || ||||||||||||| ||||||    
T  24556735 gtacacgtatgagttttttctagactctaattccactttctcaacataaatttggtgctattaaaccaccatcaatttgaataatcacttaataagtcaa 24556834  T
Q  519 tttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||| ||| |||||||||| ||||||||||||||||    
T  24556835 tttgaaaaactatttcatttaaagaatcacaacaat 24556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 646
Target Start/End: Complemental strand, 13120921 - 13120776
Alignment:
Q  499 ataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccaca 598  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |        ||| |||||||||||| |||| |||||| | ||     
T  13120921 ataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttcttt-ttcgcataaaccattcattttcccctttcctacg 13120823  T
Q  599 agagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |   ||||||||| | ||||||||||||| |||| |||||||||||||    
T  13120822 acgtaggagtgac-attccaaacgacaccgttaggtaaatttcacctc 13120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 14076336 - 14076231
Alignment:
Q  30 aagttacgatgtgggactttctacgactgtttgttctaaaaatcaacacagcgaaaacactatcaagagtcacaatgtggagcttcttttttgttatcaa 129  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| |||             ||||||  |||||||||||| |||||||||||||    
T  14076336 aagttacgatgtgggactttcttcaactgtttgttctgaaaatcaacactgcg-------------gagtcaggatgtggagcttcctttttgttatcaa 14076250  T
Q  130 gagacaccttaagtcctta 148  Q
    |||||||||||||||||||    
T  14076249 gagacaccttaagtcctta 14076231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 14076949 - 14076856
Alignment:
Q  59 tttgttctaaaaatcaacacagcg-aaaacactatcaagagtcacaatgtggagcttcttttttgttatcaagagacaccttaagtccttatca 151  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||| ||||| | ||||||| ||||| || ||||||||||||  |||||||||    
T  14076949 tttgttcaaaaaatcaacactgcgtaaaacactatcaagagtcacgatgtgaaacttctttattgttgtcgagagacaccttatatccttatca 14076856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 51109918 - 51109849
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  51109918 ttacgttttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccct 51109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 591 - 646
Target Start/End: Original strand, 20470713 - 20470768
Alignment:
Q  591 tttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  20470713 tttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctc 20470768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 643
Target Start/End: Original strand, 9777387 - 9777565
Alignment:
Q  464 ataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc-attgaaagaatcacaacaatcannnnnn 562  Q
    ||||||||||| ||| |||| |||||| ||| | |||||||||| |||||||||||||| | | ||||||| ||  ||||||||||||||||||          
T  9777387 ataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatcattacct 9777486  T
Q  563 ncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
      ||| ||||||||||| | ||| |||||| ||| ||  || || ||| |||||||||||||||| |||| ||||||||||    
T  9777487 t-ttctcataaaccatttg-tttcccctttcccataatggatgaatgataaatccaaacgacaccgttaggtaaatttcac 9777565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 26486513 - 26486373
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||| |||||| ||||||||| ||| ||||||||| ||||||||||| |||| || | |||||| |||| |||||||| || |   ||| ||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttttctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatca 26486414  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||||||        || |||||||||||||||||| ||||| ||||||    
T  26486413 cttaatc--------tgaaaagctatttcattgaaaaaatcataacaat 26486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 734 - 788
Target Start/End: Complemental strand, 30004727 - 30004673
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||||||||||||    
T  30004727 ttacgttttattttactatgggcctattttaaaaagagagccgagcctcctattt 30004673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 432 - 550
Target Start/End: Original strand, 38263806 - 38263924
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||||||||||||  ||||||| |||||||| |||| |||| ||| |||     || || || || |||||||||||||||||  ||| ||||    
T  38263806 ttttttctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatcagtcaatttaaaaaactat 38263905  T
Q  532 ttcattgaaagaatcacaa 550  Q
    |||||||| ||||||||||    
T  38263906 ttcattgatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 17487098 - 17487029
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  17487098 ttacgttttattttactaagggcctattttaaaaagagagtcgagcctcctatttcacggggacgaccct 17487029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 511
Target Start/End: Complemental strand, 31369536 - 31369432
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||||||||||| | ||| |||||| ||||||||| |||||| ||||||||| || |||||||||||||  ||||||| |||    ||| ||||||||||    
T  31369536 ttttctttcttc-gaacatgtttgagttttttctaaactctaattctcctttctggacataaatctgatgttatcaaaccactttcaatttgtataatca 31369438  T
Q  506 cttaat 511  Q
    ||||||    
T  31369437 cttaat 31369432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 738 - 803
Target Start/End: Original strand, 50552746 - 50552811
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||||| || ||||| |||||    
T  50552746 gttttattttactaagggtttattttaaaaagagagctgagcctcctattttacagggacagccct 50552811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 28886251 - 28886140
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||| ||||  |||||||||  |||| | | ||||||| ||||||||||  |||| ||||||| |||||||||||||| ||| ||| |||| |    
T  28886251 ggcccggccttaaggggttgcaaggtgtccaaccaaatcggaccttcaaatgttacgtgcctttaacgaagaattaaatctaatatcca-ccttcactca 28886153  T
Q  381 aataaaaaatata 393  Q
    |||||||||||||    
T  28886152 aataaaaaatata 28886140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 760 - 803
Target Start/End: Original strand, 20470884 - 20470927
Alignment:
Q  760 ttttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  20470884 ttttaaaaagagagccgagcctcctatttcacggggacggccct 20470927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 800
Target Start/End: Complemental strand, 48722185 - 48722119
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggc 800  Q
    ||||||||||||||| ||| |  |||||||||||||||||  ||||||||||||||||  |||||||    
T  48722185 ttacgttttattttactatggacctattttaaaaagagagtcgagcctcctatttcacacggacggc 48722119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 738 - 803
Target Start/End: Original strand, 6150971 - 6151036
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||| ||  ||  ||||||||||||||||  |||||||||||||||| |||||||||||    
T  6150971 gttttattttactaagggcttattttaaaaagagagtcgagcctcctatttcacagggacggccct 6151036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 26207184 - 26207275
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||||| |||||||| ||  ||| |||||||||| |||| |  || ||| ||||||||| ||| ||||||||||  |||||||||||||||    
T  26207184 gtgcaagatgctcaaccaggtcgggcctccaaatgctacatgtatcaaacaaaaaattaagtctgatacccaccccacacttaaataaaaaa 26207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 797
Target Start/End: Original strand, 30899929 - 30899972
Alignment:
Q  754 ggtctattttaaaaagagagctgagcctcctatttcactgggac 797  Q
    ||||||||||||||||||||| || ||||||||||||| |||||    
T  30899929 ggtctattttaaaaagagagccgaacctcctatttcacagggac 30899972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 803
Target Start/End: Complemental strand, 20905082 - 20905036
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  20905082 ctattttaaaaagagagtcgagcctcctatttcacagggacgaccct 20905036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 803
Target Start/End: Complemental strand, 6333065 - 6333020
Alignment:
Q  758 tattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||| | ||||||||||||| | |||||||||||    
T  6333065 tattttaaaaagagagttcagcctcctatttcgcagggacggccct 6333020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 739 - 788
Target Start/End: Original strand, 12971655 - 12971704
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    |||||||||||||  ||| ||||||||| ||||||| |||||||||||||    
T  12971655 ttttattttattaggggtttattttaaatagagagccgagcctcctattt 12971704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 791
Target Start/End: Complemental strand, 29207912 - 29207855
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||| |  |||||||| ||||||||  ||||||||||||||||    
T  29207912 ttacgttttattttactatggacctattttagaaagagagtcgagcctcctatttcac 29207855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 535
Target Start/End: Complemental strand, 32810415 - 32810370
Alignment:
Q  490 ctaatatgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
    ||||| || ||||||||||||||| |||||||| ||||||||||||    
T  32810415 ctaatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 250; Significance: 1e-138; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 53011506 - 53011868
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| || ||| |||    
T  53011506 ggcccagccttgagggtgtgcaaggtgctcaaccagaccgg-cctccaaatgctacgggcctctaacgaaaaattaaatctaatacccatcccccattta 53011604  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  53011605 aataaaaaatat--atgttatatcattttctttctttagtacacgtttgagttttttctaaactctaattctcctttttgtacataaatcagatcctatc 53011702  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||| ||||||||||||    
T  53011703 aaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcatttttttcttcgcataaaccattc 53011802  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
     |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53011803 attttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 53011868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 19661171 - 19661535
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || | || ||| |||||| ||  || ||||||||||||||||||| ||||||||| || |||||||    
T  19661171 ggccccgccttgagggtgtgcaaggtgctcaaccaggcggg-ccttcaaatgctatgggtctctaacgaaaaattaaatttaatacccatcccccactta 19661269  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  19661270 aataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttctagactctagttctcatttttgtacataaatcggatcctatc 19661369  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||  ||||||||||||    
T  19661370 aaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatcctttttttctttgcataaaccattc 19661469  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  19661470 gttttacccttttccacaacaaaggagtgacaaatccaaacgacaccgttagataaatttcacctc 19661535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 281 - 642
Target Start/End: Complemental strand, 32131063 - 32130702
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||||||| |||||| ||||| || | || |||||||||| |||  || ||| ||||||||||||||||||||||||||| |||||||    
T  32131063 ggcccggccttgagggtgtgtaaggtgttcaaccaggctgggcctccaaatgctacgagcttctcacgaaaaattaaatctaatacccaccccccactta 32130964  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  32130963 aataaaaaatatatatgttatatcattttctttctttagtacccgtttgagttttttctagacactagttcttctttttgtacataaatcggatcctatc 32130864  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||       |||| ||||||||||||    
T  32130863 aaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattc 32130764  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  32130763 gttttacccttttccacaacagaggagtgacaaattcaaacgacacaattagataaatttca 32130702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 28463862 - 28463496
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || |||| ||||||||||||| ||||  || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  28463862 ggcccggctttgaaggtgtgcaaggtgttcaatcaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccactta 28463763  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||| |||    
T  28463762 aataaaaaatatatatgttatatccttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcttat 28463663  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccatt 579  Q
    |||| |||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||       |||| |||||||||||    
T  28463662 caaaccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccatt 28463563  T
Q  580 cgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28463562 cgttttgcccttttccacaatagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 28463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 11682008 - 11681650
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||| || |||| ||| |||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11682008 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11681909  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcc-tttttgtacataaatctgatcctatcaaatcac 487  Q
    ||||||| ||||||  ||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||    
T  11681908 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11681809  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||||  ||||||||| ||||||||    
T  11681808 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttac 11681709  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  11681708 ccttttccacaacagatgagtgacaaatccaaacaacaccgttagataaatttcacctc 11681650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 11690287 - 11689929
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||| || |||| ||| |||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11690287 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11690188  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcc-tttttgtacataaatctgatcctatcaaatcac 487  Q
    ||||||| ||||||  ||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||    
T  11690187 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11690088  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||||  ||||||||| ||||||||    
T  11690087 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttac 11689988  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  11689987 ccttttccacaacagatgagtgacaaatccaaacaacaccgttagataaatttcacctc 11689929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 299 - 646
Target Start/End: Complemental strand, 23426417 - 23426074
Alignment:
Q  299 tgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgt 398  Q
    |||||||||||||||||| | ||||||| ||||  ||| ||||||||||||||||||||||||||||||||||| | |||||||||     |||||||||    
T  23426417 tgcaaggtgctcaactaggctggacctcgaaatactacgggcctctaacgaaaaattaaatctaatacccaccccctacttaaata-----tatatatgt 23426323  T
Q  399 tatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatg 497  Q
    |||||  ||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||    
T  23426322 tatatacttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttg 23426223  T
Q  498 tataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccac 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  23426222 tataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccac 23426123  T
Q  598 aagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || ||||||||||||||||||||| || || ||||||||||||||||||    
T  23426122 aacagaggagtgacaaatccaaacaacgccgttagataaatttcacctc 23426074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 41038039 - 41038406
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||||||||||| |||||||| || |||| |||||||||| ||| || ||||||||||||||||||||||||| |||||| ||| |||    
T  41038039 ggcccggccttgagggtgtgcaagatgctcaaccaggccgggcctccaaatgatac-ggtctctaacgaaaaattaaatctaatatccaccccccattta 41038137  T
Q  381 aataaaaaa-tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttt-tgtacataaatctgatcct 477  Q
    ||||||||| ||||||| ||||||| ||||  ||||| ||||||||||||| |||||| ||||||||||||| |  |||| ||||||||||||  |||||    
T  41038138 aataaaaaaatatatatattatatcttttttattctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcct 41038237  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||| |||||||||    
T  41038238 atcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaacca 41038337  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41038338 ttcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 41038406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 290 - 645
Target Start/End: Original strand, 23256394 - 23256748
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||  || ||| ||||||||||||||  || || |||||||||||||||| ||||| |||||| ||||||||| ||||||    
T  23256394 ttgagggtgtgcaaggtgctcaatcaggccgaacctccaaatgttatgggtctttaacgaaaaattaaatataatatccaccc-ccacttaaacaaaaaa 23256492  T
Q  390 --tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
      ||||||||||||||| ||||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||    
T  23256493 aatatatatgttatatccttttctttctt-agtacacatttgagttttttttagactccagttctcctttttgtacataaatcggatcctatcaaaccac 23256591  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||       |||| |||||||||||||||||||    
T  23256592 ccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatca-ttttttcttcccataaaccattcgttttac 23256690  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  23256691 ccttttccacaacagaggagtgacaaattcaaacgacaccggtagataaatttcacct 23256748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 44477829 - 44478196
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||||||| |||||| ||||| ||  ||| ||||||||| |||| | ||||||||||||||| |||||||||| ||||||  || |||    
T  44477829 ggcccggccttgagggtgtgtaaggtgttcaaccaggtcgggcctccaaatattacggacctctaacgaaaaat-aaatctaatatccacccctcattta 44477927  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagact-ctagttctcctttttgtacataaatctgatccta 478  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||| ||| |||||| || |||||||||||||||| |||||||    
T  44477928 aataaaaaatatatatgttatatcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatccta 44478027  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaacca 577  Q
    ||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||| |    
T  44478028 tcaaaccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaacta 44478127  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  44478128 ttcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 44478196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 288 - 646
Target Start/End: Original strand, 27632199 - 27632554
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||| ||| |||||  ||  ||| |||||  |||||||||| || ||  ||||||||||    
T  27632199 ccttgagggagtgcaaggtgctcaactaggccgggcctccaaatgctacgggcctaaaa--aaatattaagactaatacccatccccctgttaaataaaa 27632296  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    || ||||  ||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  27632297 aaaatat--gttatataattttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaacca 27632394  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||       |||| |||||| |||||| ||||    
T  27632395 cccctaatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcatttttttcttcgcataaatcattcgcttta 27632494  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| |||| |||||||||||||||| ||||| ||||||||||||||||||    
T  27632495 cccttttccacaacagagtagtgacaaatccaaacaacaccgttagataaatttcacctc 27632554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 29221897 - 29221529
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||| ||| ||||||||||||||||  ||| || ||||||||||  |  |||||| ||| ||||||||| | |||||||||||| |||||||    
T  29221897 ggcccggccttgtgggagtgcaaggtgctcaaccggactgggcctccaaatgccatgggcctcaaacaaaaaattaagtttaatacccaccccccactta 29221798  T
Q  381 aataaaaaa--tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcct 477  Q
    |||||||||  ||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||    
T  29221797 aataaaaaaaatatatatgttatatccttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgatcct 29221698  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    |||||| ||| | |||| ||||||||||||||| | ||||||||||||  ||||||||||||| |||||||||||||||       |||| |||||||||    
T  29221697 atcaaaccactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatcatttttttcttcgcataaacca 29221598  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||| || ||| |||||||||||    
T  29221597 ttcgttttacccttttccacaacagaggagtgacaaatttaaacgacaccgttggattaatttcacctc 29221529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 281 - 521
Target Start/End: Original strand, 21168847 - 21169088
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||| ||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||  ||||||    
T  21168847 ggcccggccttgagggtatgcaaggtgctcaaccaggccggatctccaaatgatacgggcctctaacgaaaaattaaatctaatgcccaccccacactta 21168946  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21168947 aataaaaaatatatatgttataaccttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctat 21169046  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaattt 521  Q
    ||||||||||||||| |||||||||| ||||| |||||||||    
T  21169047 caaatcacccctaatttgtataatcaattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 395 - 646
Target Start/End: Original strand, 16072498 - 16072754
Alignment:
Q  395 atgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaa 493  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||  |||||| |||||||||||||||||||| ||||||||||||| || ||||||    
T  16072498 atgttatatcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaa 16072597  T
Q  494 tatgtataatcacttaatcagtcaatttggaaagctatttcatt----gaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccc 589  Q
    | |||||||||| |||||||||||||||| ||| |||||||| |    |||||||||||||||||||       |||| ||||||| ||| |||||||||    
T  16072598 tttgtataatcatttaatcagtcaatttgaaaaactatttcaatgaaagaaagaatcacaacaatcatttttttcttcgcataaactatttgttttaccc 16072697  T
Q  590 ttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| |||||||||||||| ||||| |||| | ||||||||||||||||||    
T  16072698 ttttccacaacagaggagtgacaaacccaaatgacatcgttagataaatttcacctc 16072754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 395 - 646
Target Start/End: Original strand, 29579783 - 29580036
Alignment:
Q  395 atgttatatcattttctttcttcagtacacgtttgaat---tttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccct 491  Q
    |||||||||| |||||||||||||  ||| |||||| |   ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  29579783 atgttatatccttttctttcttca-aacatgtttgagtttctttttctagactctagttctattttttgtacataaatctgatcctatcaaaccacccat 29579881  T
Q  492 aatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccctt 591  Q
    ||| |||||||| | |||||||||||| ||| |||||||||||| ||||||||||||||||||||       |||| ||||||| |||||||||||| ||    
T  29579882 aatttgtataattaattaatcagtcaaattgaaaagctatttcaatgaaagaatcacaacaatcatttttttcttcgcataaacaattcgttttaccatt 29579981  T
Q  592 ttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||| |||| ||||||||||||||| || ||| ||||||||||||||||||    
T  29579982 ttccacaacagagtagtgacaaatccaaatgataccgttagataaatttcacctc 29580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 287 - 632
Target Start/End: Complemental strand, 45172895 - 45172568
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||| |||||||||||||||  |  |||||||| |||| ||||   ||||| ||  ||||||||||||||||| |||||| |||||||||||||    
T  45172895 gccttgagggagtgcaaggtgctcaatcaagccggacctacaaaagttatgtgcctcaaa--aaaaattaaatctaatatccaccc-ccacttaaataaa 45172799  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||             ||||  ||||||||||| ||||||||||||| |||||||||  | || ||||||||||| | |||||||| ||    
T  45172798 aaatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttctccaatctggacataaatctggtactatcaaacca 45172712  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    ||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||        |||| ||| ||||||||||||     
T  45172711 ccc-taatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcatttcttt-ttcatatagaccattcgttttc 45172614  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    |||||| ||||||  ||  ||||||||||||||| |||||| ||||    
T  45172613 ccctttcccacaacggataagtgacaaatccaaatgacaccgttag 45172568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 389 - 556
Target Start/End: Complemental strand, 21791712 - 21791545
Alignment:
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    ||||||||||||  || ||||||||| |||||||| |||||| |||||||||||||||||||||||||| || |||||||| |||| | |||||| ||||    
T  21791712 atatatatgttacttctttttctttcatcagtacatgtttgagttttttctagactctagttctcctttctgaacataaatttgatgccatcaaaccacc 21791613  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
       ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21791612 ttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatca 21791545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 422 - 643
Target Start/End: Original strand, 5545261 - 5545481
Alignment:
Q  422 cacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaattt 521  Q
    ||||||||| |||||||||||||||| |||| || | || |||||||| |||| | |||||| |||| | ||| ||||||||||||||||| ||||||||    
T  5545261 cacgtttgagttttttctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaattt 5545360  T
Q  522 ggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaac 621  Q
    |||||||||||||||| ||||||||||||||||||        ||| ||||||||||||||||| ||| ||  |||||  |||||||||||||| |||||    
T  5545361 ggaaagctatttcattaaaagaatcacaacaatcatttattt-ttcgcataaaccattcgttttcccccttctcacaacggaggagtgacaaattcaaac 5545459  T
Q  622 gacaccattagataaatttcac 643  Q
    |||||| |||| ||||||||||    
T  5545460 gacaccgttaggtaaatttcac 5545481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 35654120 - 35653980
Alignment:
Q  414 cttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatca 513  Q
    ||||| ||||||| ||| ||||||||||||||||||||| |||| || |||||||| |||| |||||||| ||||   ||| ||||||||||||||||||    
T  35654120 cttcactacacgtatgagttttttctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatca 35654021  T
Q  514 gtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
     |||||||| |||||||||||||||||||||||||||||||    
T  35654020 atcaatttgaaaagctatttcattgaaagaatcacaacaat 35653980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 39372927 - 39372815
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||||||||| || ||||||||||||||  ||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  39372927 cttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctttaacgaaaaattaaatctaatatccacccgccacttaaataaaaa 39372828  T
Q  389 atatatatgttat 401  Q
    |||||||||||||    
T  39372827 atatatatgttat 39372815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 43154936 - 43154788
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    ||||||||||| || |||||| ||| ||||||||||| ||||||||| ||||||| |||||||| |||| |||||||| ||||   ||| ||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttttctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatca 43154837  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||||||||  |||| ||||||||| ||||||||||||||||    
T  43154836 cttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaat 43154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 349 - 554
Target Start/End: Original strand, 34982097 - 34982288
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||    
T  34982097 aaaaattaaatctaatacccaccc-ctacttaaataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttag 34982182  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    || | || | || ||||||||||| | ||| |||| || ||| ||| ||||||||||||||||||||||||| | ||| ||||||| |||||||||||||    
T  34982183 tttttctatctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcac 34982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 406 - 646
Target Start/End: Original strand, 22423600 - 22423840
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||| ||||||  |||||||| ||| ||||||||||||||||||||| |||| || |||||||| |||| |||||||| ||||   ||| ||||| ||||    
T  22423600 ttttttttctttggtacacgtatgagttttttctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatca 22423699  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnnctt-cacataaaccattcgttttacccttttccacaagagag 604  Q
    |||||||| |||||||| ||| |||||| ||||||||||||| |||||| |        || |||||||| |||||||||| || |||   || | | ||    
T  22423700 cttaatcaatcaatttgaaaaactattttattgaaagaatcaaaacaattatttattttttccacataaatcattcgtttttccatttcatacgacatag 22423799  T
Q  605 gagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||| | ||||||||||||| ||||||||||||||||||    
T  22423800 gagtgac-attccaaacgacaccgttagataaatttcacctc 22423840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 374 - 529
Target Start/End: Complemental strand, 26329211 - 26329057
Alignment:
Q  374 ccacttaaataaa-aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctg 472  Q
    ||||||||||||| ||| ||||||||||  || |||||||||||  |||||||||||||||||||||||||| || ||||||  |||| |||||||||||    
T  26329211 ccacttaaataaataaaaatatatgttacttctttttctttctttggtacacgtttgaattttttctagactgtaattctcc--tttggacataaatctg 26329114  T
Q  473 atcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagct 529  Q
    || ||| |||| |||| | ||| | |||||||| | ||||||||||||| |||||||    
T  26329113 atgctaccaaaccacctccaatttatataatcattcaatcagtcaatttagaaagct 26329057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 420 - 556
Target Start/End: Original strand, 55134138 - 55134274
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| |||||| |||||| |||||||| | | || |||||||| || | |||||||| |||  | |||  ||||||| |||||||||||||||    
T  55134138 tacacgtttgagttttttgtagactttagttctcttatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaat 55134237  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||| ||||||||||||| |||||||||||||||||||    
T  55134238 ttgaaaagctatttcatagaaagaatcacaacaatca 55134274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 432 - 642
Target Start/End: Complemental strand, 10575642 - 10575437
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||| |||||||||||   ||||  |||||||| | || |||||||| |||||  ||  |||||||||||||||||||||||||| ||||| |||    
T  10575642 ttttttctaaactctagttct---tttttaacataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttat 10575546  T
Q  532 ttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccatta 631  Q
    |||||||||| ||||||||||||||        ||| ||||||||||||||||| |||||| |||| |  |||||||||| ||||| || |||||| | |    
T  10575545 ttcattgaaataatcacaacaatcatttcttt-ttcgcataaaccattcgttttcccctttcccacgacggaggagtgac-aatccgaatgacaccgtca 10575448  T
Q  632 gataaatttca 642  Q
    | |||||||||    
T  10575447 ggtaaatttca 10575437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 24449040 - 24449190
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac--ccctaatatgtataat 503  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || | |||||| |||| |||||||| |||      ||| ||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataat 24449139  T
Q  504 cacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||| ||||||||| ||| ||||||| | ||||||| |||||||||    
T  24449140 cacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 24449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 29579655 - 29579766
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatg 397  Q
    |||||| ||||||||  || ||||||||||||||| ||| || ||| ||| ||||||||| |||||| | ||||| |||||||||||||||| |||||||    
T  29579655 gtgcaaagtgctcaatcaggccggacctccaaatgctacgggtctcaaacaaaaaattaagtctaatgctcaccccccacttaaataaaaaaaatatatg 29579754  T
Q  398 ttatatcatttt 409  Q
    ||||||| ||||    
T  29579755 ttatatcctttt 29579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 735 - 800
Target Start/End: Complemental strand, 29221442 - 29221377
Alignment:
Q  735 tacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggc 800  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  29221442 tacgttttattttactagaggcctattttaaaaagagagccgagcctcctatttcacagggacggc 29221377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 590 - 646
Target Start/End: Complemental strand, 16887947 - 16887891
Alignment:
Q  590 ttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16887947 ttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctc 16887891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 369 - 446
Target Start/End: Complemental strand, 48512409 - 48512330
Alignment:
Q  369 accctccacttaaat--aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactct 446  Q
    |||| ||||||||||  |||||| ||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||    
T  48512409 accccccacttaaatttaaaaaaaatatatgttatttctttttctttctttagtacacgtttgagttttttctagactct 48512330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 804
Target Start/End: Original strand, 41038496 - 41038566
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    |||| |||||||||| ||  || |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  41038496 ttacattttattttactaggggcctattttaaaaagagagccgagcctcctatttcaccgggacggcccta 41038566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 53011959 - 53012028
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| |||  | |||||||||||||||||| |||||||||||||||| || ||||||||    
T  53011959 ttacgttttattttactatgagcctattttaaaaagagagccgagcctcctatttcacaggaacggccct 53012028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 738 - 804
Target Start/End: Complemental strand, 11681557 - 11681491
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||| ||  || |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  11681557 gttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacggggacggcccta 11681491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 738 - 804
Target Start/End: Complemental strand, 11689836 - 11689770
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||| ||  || |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  11689836 gttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacggggacggcccta 11689770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 803
Target Start/End: Original strand, 19661648 - 19661694
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  19661648 ctattttaaaaagagagcagagcctcctatttcactaggacggccct 19661694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 16072220 - 16072310
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||||| ||||||| |||||| |||||| ||||| || ||||||  ||  ||||||||| |||||||||||||| |||| |||||||||||    
T  16072220 gtgcaagatgctcaattagaccagacctcaaaatgctaaaggccttaaataaaaaattaagtctaatacccaccc-ccacataaataaaaaa 16072310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 796
Target Start/End: Complemental strand, 28463405 - 28463344
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactggga 796  Q
    |||| |||||||||| || || |||||||||||||| ||||||||||||||||||||| ||||    
T  28463405 ttacattttattttactaaagatctattttaaaaag-gagctgagcctcctatttcacgggga 28463344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 791
Target Start/End: Original strand, 23256842 - 23256898
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||  || |||||||||||||||||| ||||||||||||||||    
T  23256842 ttacgttttattttactag-ggcctattttaaaaagagagccgagcctcctatttcac 23256898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 791
Target Start/End: Original strand, 27632643 - 27632700
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||  || ||||||||||| |||||| ||||||||||||||||    
T  27632643 ttacgttttattttactaggggcctattttaaaatgagagccgagcctcctatttcac 27632700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 55134081 - 55134127
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatat 396  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||    
T  55134081 aaaaatttactctaatacccaccc-ccacttaaataaaaaatatatat 55134127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 32130609 - 32130539
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| ||  |  |||||||||||  ||||| |||||||||||||||| ||||||| ||||    
T  32130609 ttacgttttattttactaaggacctattttaaaagaagagccgagcctcctatttcacagggacggtccta 32130539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 788
Target Start/End: Original strand, 44478284 - 44478338
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    ||||||||||||||| || || ||||||||||||||||||  || ||||||||||    
T  44478284 ttacgttttattttactaaagatctattttaaaaagagagtcgaacctcctattt 44478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 551
Target Start/End: Complemental strand, 51066704 - 51066667
Alignment:
Q  514 gtcaatttggaaagctatttcattgaaagaatcacaac 551  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  51066704 gtcaatttagaaagcaatttcattgaaagaatcacaac 51066667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 290 - 646
Target Start/End: Original strand, 2618155 - 2618511
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||| |||||||||||||||||| ||  |||  ||||||||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  2618155 ttgagagtgtgcaaggtgctcaaccaggtcgggtctccaaatgttacgggcctctattgaaaaattaaatctaatacccaccccccacttaaataaaaaa 2618254  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcaccc 489  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  2618255 tatatatgttatatcattttctttctttagtacacgtttgagttttttctagactttagttctcttttttgtacataaatcggatcctatcaaaccaccc 2618354  T
Q  490 ctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccc 589  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |       |||| |||||||||||||||||||||    
T  2618355 ctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttcttcgcataaaccattcgttttaccc 2618454  T
Q  590 ttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  2618455 ttttccacaacagaggagtgacaaatccaaacgacaccgttggataaatttcacctc 2618511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 3515125 - 3514758
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| |  |||| ||| |||||| ||| |||||||||||||||||||||| |||||| ||||| |||||||    
T  3515125 ggcccggccttgagggtgtgcaaggtgctcaaccaagccgggcctacaaatgctacgggcctctaacgaaaaattaaatttaatactcaccccccactta 3515026  T
Q  381 aataaaaaa-tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatccta 478  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  3515025 aataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatccta 3514926  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccat 578  Q
    ||||| |||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||       |||| ||||||||||    
T  3514925 tcaaaccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatcatttttttcttcgcataaaccat 3514826  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  3514825 tcgttttacccttttccacaacagaggagtgaaaaatccaaacgacaccattagataaatttcacctc 3514758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 301 - 646
Target Start/End: Original strand, 57498 - 57844
Alignment:
Q  301 caaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgtta 400  Q
    ||||||||||||| ||  |||||||||||||| ||| |||||| ||| ||||||||| |||||||||||| | |||||||||||||| ||||||||||||    
T  57498 caaggtgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccactccccacttaaataaaagatatatatgtta 57597  T
Q  401 tatcattttctttcttcagtacacgtttgaattttttct-agactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgta 499  Q
    ||||||||||||||||| |||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  57598 tatcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgta 57697  T
Q  500 taatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaa 599  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||       |||| |||||||||||||||||||||||||||||||    
T  57698 taatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaa 57797  T
Q  600 gagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||    
T  57798 tagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 57844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 287 - 642
Target Start/End: Original strand, 6360558 - 6360911
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||  || || | |||||||||| ||| ||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  6360558 gccttgagggtgtgcaaggtgctcaatcaggccaggcctccaaatgctacgggcctctaacgaaaa-ttaaatctaatatccaccccccacttaaataaa 6360656  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||    
T  6360657 aaatatatatgttatatcattttctttctttagtacacgtttgagttttttctagactctagttctcttttttgcacataaatcggatcctatcaaacca 6360756  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    ||| |||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||       ||||  |||||||||||||||||    
T  6360757 cccttaatttgtataatcacttaatcagtcaatttgaaaagtta-ttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgtttta 6360855  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  6360856 cccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttca 6360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 6754003 - 6754362
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||| ||||||||||| ||||  ||  |||||||||||||| ||| |||||||| ||||||||||| |||||||| ||| | |||||||||||||    
T  6754003 gccttgaggatgtgcaaggtgttcaatcaggtcggacctccaaatgctacgggcctctatcgaaaaattaattctaatactcactccccacttaaataaa 6754102  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||    
T  6754103 aaatatatatgttatatcattttctttctttagtacgcgtttgagttttttctagattctagttctcttttttgtacataaatcggatcctatcaaacca 6754202  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
     ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||    
T  6754203 tccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta 6754302  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||  ||||||||||||||    
T  6754303 cccttttccacaacagaggagtgacaaatccaaatgacaccgttgaataaatttcacctc 6754362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 288 - 645
Target Start/End: Complemental strand, 7525434 - 7525076
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||  ||| |||||||| |||| || |||||||||| ||| || |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  7525434 ccttgagggtgtataagatgctcaaccagacggggcctccaaatgctacgggtctctaacgaaaaattaaatctaatactcaccccccacttaaataaaa 7525335  T
Q  388 aatatatatgttatatcattttcttt-cttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    ||| ||||| ||||||| |||| ||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||||||||||| |    
T  7525334 aatttatatattatatcctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaacc 7525235  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||       |||| ||||||| |||  ||||    
T  7525234 acccataatttgtataatcacttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcatttttttcttcgcataaacaatttatttt 7525135  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  7525134 acccttttccacaacagaggagtgacaaatccaaa-gacaccgttagataaatttcacct 7525076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 289 - 646
Target Start/End: Original strand, 29400939 - 29401294
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||||||||  ||| |||   |||||||| ||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  29400939 cttgagggtgtgcaaggtgctcaatcagatcgggtttccaaatgctacgggcctctaacaaaaaattaaatataatacccacc-tccacttaaataaaaa 29401037  T
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||| || |||||||||| || ||||||||||||||||  |||||||||||  ||    
T  29401038 atatatatgtcatatcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatcctatcaaactac 29401137  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||       |||| |||||||||||||| ||||    
T  29401138 ccctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtcttac 29401237  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| | |||||||||||||||||||| ||||||  |||||||||||||||||    
T  29401238 ccttttccacgacagaggagtgacaaatccaaatgacacc--tagataaatttcacctc 29401294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 375 - 646
Target Start/End: Complemental strand, 12614895 - 12614626
Alignment:
Q  375 cacttaaataaaaaa-tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctga 473  Q
    ||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||    
T  12614895 cacttaaataaaaaaatatatatgttatatccttttctttttt-agtacacgtttgagttttttttagactctagttctcctttttgtacataaatcgga 12614797  T
Q  474 tcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataa 573  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| |||||    
T  12614796 tcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataa 12614697  T
Q  574 accattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||| |||||||||||||||||||| |||||||| |||||| ||||||  ||| ||||||||||||||||||    
T  12614696 accatccgttttacccttttccacaacagaggagtaacaaattcaaacg--accgttagataaatttcacctc 12614626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 407 - 646
Target Start/End: Original strand, 29149316 - 29149559
Alignment:
Q  407 tttctttcttcagtacacgtttga----attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataa 502  Q
    |||||||||| |||||||||||||     ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  503 tcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagag 602  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||||| ||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacag 29149515  T
Q  603 aggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||| ||| |||  |||||||||||||    
T  29149516 aggagtgacaaatccaaacgataccgttacgtaaatttcacctc 29149559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 397 - 644
Target Start/End: Complemental strand, 628254 - 628006
Alignment:
Q  397 gttatatcattttctttcttcagtacacgtttgaattt--tttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaat 494  Q
    |||||||| | ||||||||| |||||| |||||| |||  ||||||||||||||||| |||||||||||| ||||| |||| ||||||| ||||||||||    
T  628254 gttatatcctcttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaat 628155  T
Q  495 atgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttc 594  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| ||||||||||||||||| ||||||||    
T  628154 ttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt-cccttttc 628056  T
Q  595 cacaagagaggagtgacaaatccaaacgacaccattagataaatttcacc 644  Q
    ||||| |||| ||||| |||||||||||||| | ||||||||||||||||    
T  628055 cacaacagagaagtgataaatccaaacgacatcgttagataaatttcacc 628006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 281 - 469
Target Start/End: Complemental strand, 31258732 - 31258543
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctcc-actt 379  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| || || |    
T  31258732 ggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccccacat 31258633  T
Q  380 aaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaat 469  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  31258632 aaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 287 - 491
Target Start/End: Original strand, 24455016 - 24455220
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||| ||| | ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  24455016 gccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacggacctctaatgaaaaattaaatctaatacccaccccccacttaaataaa 24455115  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaa-ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||||| |||   | ||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||| |    
T  24455116 aaatatatatgttatatc-tttatatcctttagtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaacc 24455214  T
Q  486 acccct 491  Q
    ||||||    
T  24455215 acccct 24455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 498 - 646
Target Start/End: Original strand, 22503751 - 22503899
Alignment:
Q  498 tataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccac 597  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||| | ||||||||       ||||  ||||||||||| ||||||||||||||||    
T  22503751 tataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcatttttttcttcgtataaaccattcattttacccttttccac 22503850  T
Q  598 aagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || |||| |||||||||| |||| |||||| ||||||||||||||||||    
T  22503851 aacagagaagtgacaaattcaaatgacaccgttagataaatttcacctc 22503899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 288 - 556
Target Start/End: Original strand, 31860815 - 31861067
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||  ||||||||||||||  |  ||||||||| ||| | ||  |||||  ||  ||||||||| |||||||||||||| |||| |||||||||    
T  31860815 ccttgagggaatgcaaggtgctcaatcaagccggacctcgaaaagctatgggcctaaaaaaaaaaattaactctaatacccaccc-ccacctaaataaaa 31860913  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
    |||||||||||||             ||||  |||||||||||  |||||||||||| ||||||| || | || ||||||||||| |  ||||||| |||    
T  31860914 aatatatatgtta-------------cttctttacacgtttgaggtttttctagactttagttcttctatctggacataaatctggta-tatcaaaccac 31860999  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31861000 ccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 31861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 349 - 556
Target Start/End: Complemental strand, 1690824 - 1690631
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||             ||||  ||||||||||| ||||||||| | | |||    
T  1690824 aaaaattaactctaatacccacc-tccacttaaataaaatatatatatgtta-------------cttctttacacgtttgagttttttctaaattttag 1690739  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| |||| ||||||||||| | |||||||| |||| | ||| ||||||||||||| |||| |||||||| |||  ||||||||||||||||||||    
T  1690738 ttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaatcac 1690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 432 - 556
Target Start/End: Complemental strand, 30915488 - 30915364
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||||||||||||| |||| || |||||||| |||| |||||||| | ||   ||| |||||||| |||||||||||||||||| ||||||||    
T  30915488 ttttttctagactctagttctactttctggacataaatttgatgctatcaaacccccatcaatttgtataattacttaatcagtcaatttgaaaagctat 30915389  T
Q  532 ttcattgaaagaatcacaacaatca 556  Q
    || ||||||||||||||||||||||    
T  30915388 ttaattgaaagaatcacaacaatca 30915364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 432 - 554
Target Start/End: Complemental strand, 3748690 - 3748568
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    |||||| |||| ||||||||| ||||||| |||||||| |||| |||||||| | ||   ||| |||||||||||||||||| |||||||| ||||||||    
T  3748690 ttttttttagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctat 3748591  T
Q  532 ttcattgaaagaatcacaacaat 554  Q
    |||||||||||||||||||||||    
T  3748590 ttcattgaaagaatcacaacaat 3748568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 298 - 556
Target Start/End: Original strand, 19231420 - 19231678
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa---aaatatat 394  Q
    |||||||||||||||| |   |||||||||||| |||| ||| ||  ||  ||| ||||  |||||||  ||||| |||||||||||||   ||| ||||    
T  19231420 gtgcaaggtgctcaaccaagtcggacctccaaaagttataggtcttaaaaaaaatattatgtctaatattcaccc-ccacttaaataaatagaaaaatat 19231518  T
Q  395 atgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaat 494  Q
    |||||| ||  |||| ||||||||| |||||||||| ||||||||||| | ||||||| |||| || ||||||||||| | ||||||||  |||   |||    
T  19231519 atgttacattttttt-tttcttcaggacacgtttgagttttttctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaat 19231617  T
Q  495 atgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
     ||||| |||||||||||| |||||||| ||||||||  |||||||| ||||||||||||||    
T  19231618 ttgtat-atcacttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatca 19231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 349 - 632
Target Start/End: Complemental strand, 1093231 - 1092964
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||             ||||  | || |||||| ||||||||||||| |||    
T  1093231 aaaaattaactctaatacccaccc-ccacttaaataaaaactatatatgtta-------------cttctttgcatgtttgagttttttctagactttag 1093146  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| | || |||||||| || | |||||||| |||  | |||  ||||||| ||| |||||||||||||  |||||||||||| ||||||||||||    
T  1093145 ttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagctatttca-tgaaagaatcac 1093047  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||||||        ||||||||||||||||||||| |||||| ||| ||  ||  ||||||||||||||| |||||| ||||    
T  1093046 aacaatcatttcttt-ttcacataaaccattcgttttcccctttcccaaaacggataagtgacaaatccaaatgacaccgttag 1092964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 379 - 556
Target Start/End: Original strand, 350306 - 350481
Alignment:
Q  379 taaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatccta 478  Q
    ||||||||||| ||||||||||  || |||||||| | | ||||| |||||||||||||| |||| ||| |||||||||  | |||||||| |||| |||    
T  350306 taaataaaaaa-atatatgttacttctttttctttttccggtacatgtttgaattttttccagacactaattctccttt--ggacataaatatgatgcta 350402  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc-attgaaagaatcacaacaatca 556  Q
    ||||| ||||   ||| | |||||||||| ||||||||||||| |||||||||||| ||  ||||||||||||||||||    
T  350403 tcaaaccaccatcaatttatataatcactcaatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaatca 350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 281 - 379
Target Start/End: Complemental strand, 12622234 - 12622136
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactt 379  Q
    ||||| ||||||||||||||||||||||||||| || |||| |||||||||| ||| | |||||||| ||||||||||||||||| ||||| |||||||    
T  12622234 ggcccagccttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacaaaaaattaaatctaatatccaccatccactt 12622136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 281 - 632
Target Start/End: Complemental strand, 29308724 - 29308390
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||| |||||||||||||||  |   ||| |||||| | |||| |||| ||  |  ||||||||| |||||||||||||| |||||||    
T  29308724 ggcccggccttgagggagtgcaaggtgctcaatcaagtcgggcctccagaagttataggcttccga--aaaaattaactctaatacccaccc-ccactta 29308628  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||||||| ||             ||||  ||||||||||| ||||||||| ||| ||||| | || | || |||||||| || | |||||    
T  29308627 aataaaaaatatatatggta-------------cttctttacacgtttgagttttttctaaactttagtttttctatctggacataaatttggtactatc 29308541  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||  | |||  ||||||| |||||||||||||||||| ||| |||||||||||||  ||||||||||||||        |||||||||| |||||    
T  29308540 aaaccactaccaattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatcatttcttt-ttcacataaatcattc 29308442  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||| |||||| ||||||  ||  ||||| ||||| ||| |||||| ||||    
T  29308441 gttttcccctttcccacaatggataagtgataaatctaaatgacaccgttag 29308390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 406 - 556
Target Start/End: Complemental strand, 14893564 - 14893415
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||||||||||||||||| |||||| |||||| ||   |||| ||||||||| |  | ||||||||||| ||||||||  || |  ||| |||||||| |    
T  14893564 ttttctttcttcagtacatgtttgagttttttgtact-tctaattctcctttctagatataaatctgatgctatcaaacaactctgaatttgtataatta 14893466  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||||||||||||||||| ||| ||||||| || ||||||||||||||||||    
T  14893465 cttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatca 14893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 583 - 646
Target Start/End: Complemental strand, 31258543 - 31258480
Alignment:
Q  583 tttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  31258543 tttacccttttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctc 31258480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 384 - 556
Target Start/End: Original strand, 11088450 - 11088613
Alignment:
Q  384 aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    |||||| | ||||||||  || |||||||| ||| |||||||||||| |||||||||||||||| ||||||  |||| ||||||||||||| ||| ||||    
T  11088450 aaaaaaaaaatatgttacttctttttcttttttcggtacacgtttgagttttttctagactctaattctcc--tttggacataaatctgatgctaccaaa 11088547  T
Q  484 tcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc-attgaaagaatcacaacaatca 556  Q
     |||||| ||| | ||        ||||||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  11088548 ccacccccaatttata--------taatcagtcaatttgaaaagctatttcaataaaaagaatcacaacaatca 11088613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 796
Target Start/End: Complemental strand, 3514668 - 3514606
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactggga 796  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  3514668 ttacgttttattttactaagggtctattttaaaaagagagttgagcctcctatttcacaggga 3514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 515 - 646
Target Start/End: Original strand, 6294279 - 6294408
Alignment:
Q  515 tcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaa 614  Q
    |||||||| ||||| |||||||||||||||||||||||||||        ||| ||||||| ||||||||| |||||| |||| |   ||||||||| |     
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttcttt-ttcgcataaactattcgttttcccctttcccacgacgtaggagtgac-at 6294376  T
Q  615 tccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| |||| |||||||||||||    
T  6294377 tccaaacgacaccgttaggtaaatttcacctc 6294408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 496 - 554
Target Start/End: Original strand, 21946113 - 21946171
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  21946113 tgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaat 21946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 2618597 - 2618666
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  2618597 ttacgttttattttactaggggcctattttaaaaagagagccgaacctcctatttcacatggacggccct 2618666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 738 - 801
Target Start/End: Original strand, 29401387 - 29401450
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 801  Q
    ||||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||||||    
T  29401387 gttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacggggacggcc 29401450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 760 - 803
Target Start/End: Complemental strand, 31258365 - 31258322
Alignment:
Q  760 ttttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  31258365 ttttaaaaagagagccgagcctcctatttcacggggacggccct 31258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 739 - 799
Target Start/End: Complemental strand, 1092856 - 1092796
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 799  Q
    ||||||||||||| ||| |||||||||| ||||| | |||||||||||||||  |||||||    
T  1092856 ttttattttattagaggcctattttaaatagagaaccgagcctcctatttcatagggacgg 1092796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 483
Target Start/End: Original strand, 6294208 - 6294272
Alignment:
Q  419 gtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    ||||| || ||| ||||||||||||||||||||| |||||||  ||||||| |||| ||||||||    
T  6294208 gtacatgtatgagttttttctagactctagttctactttttgggcataaatttgatgctatcaaa 6294272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 734 - 790
Target Start/End: Original strand, 22503988 - 22504044
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttca 790  Q
    ||||||||||||||| |   ||||||||||||||||||| | |||||||||||||||    
T  22503988 ttacgttttattttactgagggtctattttaaaaagagaaccgagcctcctatttca 22504044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 739 - 803
Target Start/End: Complemental strand, 29308282 - 29308218
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||||||||    
T  29308282 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatggggacggccct 29308218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 790
Target Start/End: Complemental strand, 1690532 - 1690481
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttca 790  Q
    ||||||||||||  ||| |||||||||| ||||||| |||||||||||||||    
T  1690532 ttttattttattggaggcctattttaaatagagagccgagcctcctatttca 1690481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 474
Target Start/End: Original strand, 7341130 - 7341193
Alignment:
Q  411 tttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgat 474  Q
    |||||||||||||| | ||| ||||||||||||||||||||  |||| || |||||||| ||||    
T  7341130 tttcttcagtacacatatgagttttttctagactctagttccactttctggacataaatttgat 7341193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 535
Target Start/End: Original strand, 31234917 - 31234956
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  31234917 tgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 790
Target Start/End: Original strand, 11088836 - 11088869
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttca 790  Q
    ||||||||||||||||| ||||||||||||||||    
T  11088836 ctattttaaaaagagagttgagcctcctatttca 11088869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 240; Significance: 1e-132; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 287 - 646
Target Start/End: Complemental strand, 29388022 - 29387662
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||| |||||||||||||||||| || |||||||| |||||| |||  || ||||||||||||||||||||||||||||||| |||||||||||||    
T  29388022 gccttgagtgtgtgcaaggtgctcaaccaggccggaccttcaaatgctacgagcttctaacgaaaaattaaatctaatacccaccccccacttaaataaa 29387923  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  29387922 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcctatcaaacc 29387823  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||    
T  29387822 acccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt 29387723  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  29387722 acccttttctacaatagaggagtgacaaatccaaacaacaccgttagataaatttcacctc 29387662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 8363962 - 8364329
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || |||| ||||||| || ||| |||||||||||||||||||||||||||| |||||| |||||||    
T  8363962 ggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacgggcctctaacgaaaaattaaatctaatatccaccccccactta 8364061  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  8364062 aataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcctat 8364161  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccat 578  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||        |||| || |||||||    
T  8364162 caaaccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcgcacaaaccat 8364261  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    | ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  8364262 ttgttttacccttttccacaacagaggagagacaaatccaaacgacaccgttagataaatttcacctc 8364329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 46791971 - 46791605
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||| |||||   ||| |||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||    
T  46791971 ggccccgccttgagggtgtgcaaggtgcttaactaagtcgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccaccccccactta 46791872  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46791871 aataaaaaatatatatgttataacattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctat 46791772  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccatt 579  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||| |||||||||||    
T  46791771 caaaccacctctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcatttttttcttcgcataaaccatt 46791672  T
Q  580 cgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |  || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  46791671 cacttgacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 46791605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 28133000 - 28132644
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||| |||| |||||||    
T  28133000 ttgagggtgtgcaaggtgctcaaccagatcgggccttcaaatgttacgggcctttaacgaaaaattaaatataatacccaccccccatttaactaaaaaa 28132901  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28132900 tatatatgttatatcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacc 28132801  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacc 588  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||    
T  28132800 cttaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-ttttttcttcgcataaaccattcgttttacc 28132702  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
     |||||||||| ||||||||||||| | |||||||| || ||||||||||||||||||    
T  28132701 attttccacaacagaggagtgacaagttcaaacgacgccgttagataaatttcacctc 28132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 281 - 644
Target Start/End: Complemental strand, 41707329 - 41706962
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||| ||||| || |||| |||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||    
T  41707329 ggcccagccttgagggtgtgcaaggtgttcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatacccaccccccactta 41707230  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41707229 aataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctat 41707130  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca---nnnnnnncttcacataaacc 576  Q
    |||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||          |||| ||||||||    
T  41707129 caaaccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttttcttcgcataaacc 41707030  T
Q  577 attcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacc 644  Q
    ||||| ||||||||||| ||||  ||||||||||||||||||||||||| | ||||||||||||||||    
T  41707029 attcgctttaccctttttcacaccagaggagtgacaaatccaaacgacaacgttagataaatttcacc 41706962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 51939822 - 51939463
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||||||||||||||||||| || | || |||||||||  ||  |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  51939822 ccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaattctatgggcctctaacaaaaaattaaatctaatacccaccccccacttaaataaaa 51939723  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||| |||    
T  51939722 aatatatatgttatatccttttctttctttagtccacgtttgagttttttctagactctagttctcttttttgtacataaatcagatcctatcaaaccac 51939623  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgtttta 586  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  51939622 ccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcacataaaccattcgtttta 51939523  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| | || |||||||||||||||||||||  || | |||||||||||||    
T  51939522 cccttttccacaacatagaagtgacaaatccaaacgacacagttggttaaatttcacctc 51939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 21785057 - 21784691
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || |||||||||||||||||||| ||| || |||| ||||| |||| ||| || |||||||||||||||||||||||||  ||||| |||||||    
T  21785057 ggcccggctttgagggtgtgcaaggtgcttaaccaggccgggcctcccaatgctacgggtctctaacgaaaaattaaatctaatattcaccc-ccactta 21784959  T
Q  381 aataaaaaa-tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    ||||||||| |||||||||||||| | ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21784958 aataaaaaaatatatatgttatataactttatttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctat 21784859  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccat 578  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||| ||||||||||    
T  21784858 caaaccacccctaatttgtataatcacttaatcagttaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccat 21784759  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  21784758 tcgttttacccttttccacaacagaggagtgacaaatccaaacgacgccgttagataaatttcacctc 21784691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 288 - 646
Target Start/End: Original strand, 24252416 - 24252776
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||| | |||||| |||||    
T  24252416 ccttgagggtgtgtaaggtgctcaaccagaccgggcctccaaatgttacgggcctctaactaaaaattagatctaatacccacccccgacttaagtaaaa 24252515  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttga---attttttctagactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    ||||||||||||||||||||| |||||||||||| |||| ||||||||||||     
T  24252516 aatatatatgttatatctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacat-aatcagatcctatcaaac 24252614  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||       |||| ||||||||||||||||    
T  24252615 cacccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcatttttttcttcgcataaaccattcgttt 24252714  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||||    
T  24252715 tacccttttccacaacagatgagtgacaaatccaaacgaccccgttagataaatttcacctc 24252776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 52655390 - 52655031
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||||||||||||||| ||| || |||| |||| ||||||||  |||||||||| |||||||||||||||| ||||||| | || |||||||||    
T  52655390 ccttgagggtgtgcaaggtgcttaaccaggccgggcctc-aaatgttatgggcctctaac-aaaaattaaatctaatccccaccccctacataaataaaa 52655293  T
Q  388 aatatatatgttatatcattttctttcttcagtacac--gtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    ||||||||||||||||||||||||||||| |||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||     
T  52655292 aatatatatgttatatcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatcctatcaaac 52655193  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | || ||||||||||||||||    
T  52655192 caccactaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcctcgcataaaccattcgttt 52655093  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||| | ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  52655092 tacccttttccacaacataggagtgacaaattcaaacgataccgttagataaatttcacctc 52655031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 294 - 646
Target Start/End: Original strand, 18407995 - 18408347
Alignment:
Q  294 gggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatata 393  Q
    ||||||| |||||| |||| ||| |||| ||| ||| || ||| |  || |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18407995 gggtgtgtaaggtgttcaattaggccgggccttcaattgctacggatctttaacgaaaaattaaatataatacccaccttccacttaaataaaaaatata 18408094  T
Q  394 tatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaa 493  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||    
T  18408095 tatgttatatcattttctttctttagtacacgtttgagttttttctagactttagttctcatttttgtacataaatcggatcctatcaaaccacccctaa 18408194  T
Q  494 tatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttaccctttt 593  Q
    | ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||        ||| ||||||| |||||||||||||||||    
T  18408195 tttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcattttttttttcgcataaacaattcgttttaccctttt 18408294  T
Q  594 ccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||| |||| |||||||||||||||||||||| || |||||||||||||||    
T  18408295 ccacaacagagcagtgacaaatccaaacgacaccgtttgataaatttcacctc 18408347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 287 - 646
Target Start/End: Complemental strand, 23164838 - 23164480
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||| ||| |||||||||| ||||| ||  ||| ||||||||||  |  |||||| ||| ||||||||  ||||||||||||||  ||||||||||||    
T  23164838 gccttgggggagtgcaaggtgttcaaccaggtcgggcctccaaatgccatgggcctcaaacaaaaaattatgtctaatacccacccctcacttaaataaa 23164739  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23164738 aaa-atatatgttatatccttttcttttttcagtacacgtttgagttttttctagactctagttctcctttttgtacataaatctgatcctatcaaacca 23164640  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |       |||| ||||||||||||||||||    
T  23164639 cccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgcataaaccattcgtttta 23164540  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || |||||||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  23164539 cctttttccacaacagaggagtgacaaatccaaacgacaccgttggataaatttcacctc 23164480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 23067999 - 23067632
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || |||| ||||||| || ||| | |||||||||||||||||||| |||||||||||| ||| |||    
T  23067999 ggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacggacctctaacgaaaaattaaatttaatacccaccc-ccattta 23067901  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatccta 478  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||| |||||||    
T  23067900 aataaaatatatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatccta 23067801  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca-acaatcannnnnnncttcacataaacca 577  Q
    ||||| |||||||||| ||||||||||||| | ||||||||||| |||| ||||||||| ||||||||||| |||||||        ||| |||||||||    
T  23067800 tcaaaccacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcattttttaattcgcataaacca 23067701  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || ||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||    
T  23067700 tttgttttacccttttccacaacagaggagtgaaaaatccaaatgacaccgttagataaatttcacctc 23067632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 27730041 - 27729677
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || ||||| ||||||||| |||||||  ||  |||||||||||||| ||| |||||||||||||||||||||| ||||||  ||||  ||||||    
T  27730041 ggcccagctttgagagtgtgcaagatgctcaatcaggtcggacctccaaatggtacgggcctctaacgaaaaattaaatataatacgtaccc--cactta 27729944  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttc-tagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||| |||    
T  27729943 aataaaaaatatatatgttatatcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttat 27729844  T
Q  480 caaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccatt 579  Q
    |||| |||||||||| ||||||||||| |||||| |||||||||||||| |||| || |||||||||||||||||||       |||| |||||||||||    
T  27729843 caaaccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcattattttcttcgcataaaccatt 27729744  T
Q  580 cgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| ||||| | || |||||||||||||||||||||  ||||||||||||||||||    
T  27729743 cgttttaccctttttcacaacatagaagtgacaaatccaaacgacactgttagataaatttcacctc 27729677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 6715247 - 6715595
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||| || |||  |||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  6715247 gccttgagggtgtgcaaggtgctcaaccaggccgagcctctaaatgttacgggcctctaacgaaaaattaaatttaatacccaccctccatttaaataaa 6715346  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    |||||||||||||||||| || | | | || | ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||    
T  6715347 aaatatatatgttatatctttatatct-tttaatacacgtttgatttttttctagactctagttctcctttttgtatataaatcggatcctatcaaacca 6715445  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    ||  |||| ||          |||||||||||||| ||||| ||||||||||||||||||| ||||||||        ||| ||||||||||||||||||    
T  6715446 cctataatttg----------taatcagtcaattttgaaagttatttcattgaaagaatcataacaatcattttttt-ttcgcataaaccattcgtttta 6715534  T
Q  587 ccc-ttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  6715535 ccctttttccacaacagaggagtgacaaatccaaacgacaccattatataaatttcacctc 6715595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 349 - 646
Target Start/End: Complemental strand, 25599291 - 25598995
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttct--agactct 446  Q
    ||||||||| ||||||| | ||||||||||||||||||||| ||||  |||||||  |||||||||||||||||| |||||| |||||| |  |||||||    
T  25599291 aaaaattaagtctaatatctaccctccacttaaataaaaaaaatat--gttatattcttttctttcttcagtacaggtttgagttttttttttagactct 25599194  T
Q  447 agttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatc 546  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25599193 agttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatc 25599094  T
Q  547 acaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||       |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  25599093 acaacaatca-tgttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 25598995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 349 - 645
Target Start/End: Original strand, 54430412 - 54430708
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||  |||||||||||||||| |||| ||||||||| |||||||| ||| |||||||||||| |||||||||| ||||||    
T  54430412 aaaaattaagtctaatacccacctcccacttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagttttttctaggctctag 54430510  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||  |    
T  54430511 ttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaagaattgc 54430610  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaac-gacaccattagataaatttcacct 645  Q
    ||||||||       |||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||| || ||| |||||||||||||||||    
T  54430611 aacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacaaacgagtgacaaatccaaacggataccgttagataaatttcacct 54430708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 340 - 646
Target Start/End: Original strand, 13401311 - 13401616
Alignment:
Q  340 cctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttct 439  Q
    |||| ||| |||| |||| | ||||||||||||| ||||||||||||||| || ||||  ||||| |||||||| ||| || ||||||    ||||||||    
T  13401311 cctcgaacaaaaatttaagtttaatacccaccctacacttaaataaaaaaaatgtatg--atatccttttcttttttcggtccacgttgagtttttttct 13401408  T
Q  440 agactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattga 539  Q
    | ||||||||||||||||||||||||| ||  |||||||||||| ||| | |||| ||||||||||||||||||||||||||| |||||||||||||||     
T  13401409 aaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgg 13401508  T
Q  540 aagaatcacaacaatcannnnnnnct-tcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaat 638  Q
    |||||||||||||||||        |  | ||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||| | ||||||||    
T  13401509 aagaatcacaacaatcatttttttttcccgcataaaccatttgttttacccttttccacaacagaggagtgccaaattcaaacgacaccgtaagataaat 13401608  T
Q  639 ttcacctc 646  Q
    ||||||||    
T  13401609 ttcacctc 13401616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 274 - 479
Target Start/End: Complemental strand, 27111087 - 27110882
Alignment:
Q  274 ataggctggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccct 373  Q
    |||||| ||||| |||||||||||||| |||||||||||| || | || |||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  27111087 ataggcaggcccggccttgagggtgtg-aaggtgctcaaccaggcggggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccacccc 27110989  T
Q  374 ccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctg 472  Q
    | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||||||      
T  27110988 ctacttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgt 27110889  T
Q  473 atcctat 479  Q
    |||||||    
T  27110888 atcctat 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 352 - 556
Target Start/End: Original strand, 21596199 - 21596401
Alignment:
Q  352 aattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttc 451  Q
    ||||||||||||||  ||  | |||||||||||||||| || |||||||| || ||| |||| |||  ||||||||||  |||||||||||||||| |||    
T  21596199 aattaaatctaatattcatgccccacttaaataaaaaa-at-tatgttatttcttttacttttttcgttacacgtttgcgttttttctagactctaattc 21596296  T
Q  452 tcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaac 551  Q
    |||||| || ||||||||| ||| |||||||| ||| || ||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  21596297 tcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcattacaagaatcacaac 21596396  T
Q  552 aatca 556  Q
    |||||    
T  21596397 aatca 21596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 288 - 626
Target Start/End: Complemental strand, 48627279 - 48626959
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||| |||||||||||||||  |  |||| |||||||| | ||  ||||||  |  ||||||||| |||||||||||||| ||||||||||||||    
T  48627279 ccttgagggggtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccaccc-ccacttaaataaaa 48627183  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
    |||||||||||||             ||||  ||||||||||| ||||||||||||| |||||||| | | || ||||||||||||| |||||| | |||    
T  48627182 aatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttctcatatctggacataaatctgatactatcagaccac 48627096  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    | | ||| ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||        ||||||||||||||||||||| |    
T  48627095 cgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttattt-ttcacataaaccattcgtttt-c 48626998  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacac 626  Q
    || || |||||   ||  ||||||||||||||| |||||    
T  48626997 ccattcccacagcggataagtgacaaatccaaatgacac 48626959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 351 - 646
Target Start/End: Complemental strand, 40152332 - 40152039
Alignment:
Q  351 aaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagtt 450  Q
    ||||||| ||||||||  || ||||| ||||| |||||| ||||||||||  || |||| ||||||| |||||||||||| |||||| ||||||||| ||    
T  40152332 aaattaagtctaataca-acactccatttaaacaaaaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttttagactctaatt 40152234  T
Q  451 ctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaa-gaatcaca 549  Q
    || ||||||  ||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| ||||||||| ||| |||||||||| ||| ||||||||    
T  40152233 cttctttttagacatagatctgatgctaccaaatcatccccaatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcaca 40152134  T
Q  550 acaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||        | | ||||||||||| | ||| |||||| ||||||  ||||| ||| | |||||||| ||||| |||| |||||||||||||    
T  40152133 acaatcatttcttt-tgcgcataaaccatttg-tttcccctttcccacaacggaggaatgatacatccaaacaacacctttaggtaaatttcacctc 40152039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 496 - 646
Target Start/End: Original strand, 20762055 - 20762205
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc 595  Q
    ||||||||||||| |||||| |||||||||  |||||||||||||||||||| ||||||||       | || |||||||||||||||||||||||||||    
T  20762055 tgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcatttttttcgtcgcataaaccattcgttttacccttttcc 20762154  T
Q  596 acaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| ||||||||||||||| ||||||| ||| ||  ||||||||||||||    
T  20762155 acaatagaggagtgacaaatacaaacgataccgttgaataaatttcacctc 20762205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 361 - 554
Target Start/End: Complemental strand, 36538375 - 36538186
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttg 460  Q
    |||||||||||||| ||||||||||||||  || ||||||   | |||| || ||||| ||||||| ||| ||||||||| ||||||||| | |||| ||    
T  36538375 taatacccaccctc-acttaaataaaaaaattacatgtta---cttttttttccttcactacacgtatgagttttttctaaactctagttatactttatg 36538280  T
Q  461 tacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
     |||||||  |||| |||||||| ||||   ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  36538279 gacataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 36538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 406 - 646
Target Start/End: Complemental strand, 42009410 - 42009172
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||| ||||||||  |||||| ||| |||||| |||||| ||||||| |||| || |||||||| |||| |||||||| ||||   ||| ||||||||||    
T  42009410 ttttttttcttcatgacacgtatgagttttttttagactttagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatca 42009311  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagagg 605  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||| |        ||||||||||||||||||||| |||||| | || |   | |    
T  42009310 cttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttcttt-ttcacataaaccattcgttttcccctttcctacgacgtaag 42009212  T
Q  606 agtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||| | ||||||||| | | ||||||||||||||||||    
T  42009211 agtgac-attccaaacgaaatcgttagataaatttcacctc 42009172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 432 - 554
Target Start/End: Original strand, 7767005 - 7767127
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    |||||||||||||| |||||| |||| || |||||||| |||| ||||||||  |||   ||| ||||||||||||||||||||||||||| ||||||||    
T  7767005 ttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctat 7767104  T
Q  532 ttcattgaaagaatcacaacaat 554  Q
    |||||||||||||||||||||||    
T  7767105 ttcattgaaagaatcacaacaat 7767127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 27303103 - 27303251
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||| ||||||||| |||||| ||  |||||||||||||||| |||| |||| || |||||||| |||| | || ||| ||||   ||| ||||||||||    
T  27303103 ttttttttcttcaggacacgtatgtgttttttctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatca 27303202  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  27303203 cttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaat 27303251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 289 - 416
Target Start/End: Original strand, 51064299 - 51064424
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||| ||||  || |||| | |||||||  ||| | ||||||||||||||||||||||||||||||   ||||||||||||||||    
T  51064299 cttgagggtgtgcaaggtgttcaatcaggccgggcttccaaatactacggacctctaacgaaaaattaaatctaataccca--ttccacttaaataaaaa 51064396  T
Q  389 atatatatgttatatcattttctttctt 416  Q
    |||||||||||||||| |||||||||||    
T  51064397 atatatatgttatatctttttctttctt 51064424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 564 - 646
Target Start/End: Complemental strand, 27110862 - 27110780
Alignment:
Q  564 cttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27110862 cttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 27110780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 349 - 556
Target Start/End: Complemental strand, 1650040 - 1649829
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgtta--tatcattttctttctt----cagtacacgtttgaattttttctaga 442  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||| ||||  | |  |||||||||||    | |||||| ||| | |||| |||| |    
T  1650040 aaaaattaagtctaatacccaccctcca-ttaaataaaaaa-atatacgttacttttttttttctttctttcatcggtacacatttaagttttgtctaaa 1649943  T
Q  443 ctctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaag 542  Q
     |||||||||| ||| |  ||||||||||| | ||||||||||||||| ||| |||||||||||||||||| |||||||| ||| |||||||| ||||||    
T  1649942 atctagttctcttttctagacataaatctggtgctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatttcactgaaag 1649843  T
Q  543 aatcacaacaatca 556  Q
      || |||||||||    
T  1649842 cttcgcaacaatca 1649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 376 - 550
Target Start/End: Complemental strand, 19966056 - 19965884
Alignment:
Q  376 acttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatt--ttttctagactctagttctcctttttgtacataaatctga 473  Q
    |||||||||||||||||||    ||  || |||||||| ||| ||| |||||||| ||  |||| || |||||| |||||||||||| ||||||||||||    
T  19966056 acttaaataaaaaatatat----tacttctttttctttattccgtatacgtttgagttggttttttaaactctaattctcctttttggacataaatctga 19965961  T
Q  474 tcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaa 550  Q
    | |||||||| |||  | ||| |||||||||||||||| ||| || ||| |||||||||||||| ||||||||||||    
T  19965960 tgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaagaatcacaa 19965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 446 - 547
Target Start/End: Complemental strand, 1255158 - 1255057
Alignment:
Q  446 tagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat 545  Q
    ||||||| ||||||| ||||||||||||| ||||||||  |||  |||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat 1255059  T
Q  546 ca 547  Q
    ||    
T  1255058 ca 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 497 - 627
Target Start/End: Original strand, 15987207 - 15987336
Alignment:
Q  497 gtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcca 596  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||||| ||||| ||||        ||| ||||||||||||||||| |||||| |||    
T  15987207 gtataatcacttaatcattcaatttcgaaagttatttcattaaaagaattacaactatcatttattt-ttcgcataaaccattcgtttttccctttccca 15987305  T
Q  597 caagagaggagtgacaaatccaaacgacacc 627  Q
    |||  |||||||||||||| |||| ||||||    
T  15987306 caacggaggagtgacaaattcaaatgacacc 15987336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 46904714 - 46904806
Alignment:
Q  462 acataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||| || |||| |||||||| ||||   ||| ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  46904714 acatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaat 46904806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 43905977 - 43905862
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    |||||||||||  ||||| |||||| |||||||||| | || ||||||||||| | ||||||||  ||||  ||| |||||||||||| |||||||||||    
T  43905977 tacacgtttgaggtttttttagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaat 43905878  T
Q  520 ttggaaagctatttca 535  Q
    ||| |||| |||||||    
T  43905877 ttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 432 - 640
Target Start/End: Original strand, 51146880 - 51147085
Alignment:
Q  432 ttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctat 531  Q
    ||||||||||| ||||||||  ||||||| |||||||| |||| |||| ||| ||||   ||| || ||| |||||||||||||||||||  ||| ||||    
T  51146880 ttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaatttaaaaaactat 51146978  T
Q  532 ttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccatta 631  Q
    || |||||||||||||||||||| |         || ||||||||||||||||| |||||||| || | | || |||||| | ||||||||||||| |||    
T  51146979 tttattgaaagaatcacaacaattattttttctctcgcataaaccattcgtttt-cccttttctacgacatagaagtgac-attccaaacgacaccgtta 51147076  T
Q  632 gataaattt 640  Q
    | |||||||    
T  51147077 ggtaaattt 51147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 554
Target Start/End: Complemental strand, 50677372 - 50677314
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  50677372 tgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaat 50677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 6715683 - 6715752
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  | ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6715683 ttacgttttattttactaaggatctattttaaaaagagagccgagcctcctatttcacggggacggccct 6715752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 739 - 803
Target Start/End: Complemental strand, 28132549 - 28132485
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||| ||  || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  28132549 ttttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccct 28132485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 555
Target Start/End: Complemental strand, 4207465 - 4207357
Alignment:
Q  441 gactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaa 540  Q
    |||||||||||||||||||| |||  |||   || |||||||| || ||  ||| |||||||||||||||||| ||||||||||||| ||||||    ||    
T  4207465 gactctagttctcctttttggacaagaattcaatgctatcaaaccatcc--aatttgtataatcacttaatcattcaatttggaaagatatttc----aa 4207372  T
Q  541 agaatcacaacaatc 555  Q
    |||||||||||||||    
T  4207371 agaatcacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 52654942 - 52654872
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| ||  |  ||||||||||||||||| ||||||||||||||||| || |||||||||    
T  52654942 ttacgttttattttactagggacctattttaaaaagagagttgagcctcctatttcacaggaacggcccta 52654872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 738 - 791
Target Start/End: Complemental strand, 23164387 - 23164334
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||    
T  23164387 gttttattttactagaggcctattttaaaaagagagctgtgcctcctatttcac 23164334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 796
Target Start/End: Original strand, 8364417 - 8364479
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactggga 796  Q
    ||||||||||||||| ||| || |||||||||||||||||  |||||||||||| ||| ||||    
T  8364417 ttacgttttattttactatgggcctattttaaaaagagagtcgagcctcctattccacaggga 8364479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 788
Target Start/End: Complemental strand, 25598902 - 25598848
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    ||||||||||||||| || ||  |||||||||||||||||| |||||||||||||    
T  25598902 ttacgttttattttactaaagacctattttaaaaagagagccgagcctcctattt 25598848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 788
Target Start/End: Complemental strand, 27110690 - 27110636
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    ||||||||||||||| ||  ||||||||||||||||||||  |||||||||||||    
T  27110690 ttacgttttattttactacgggtctattttaaaaagagagtcgagcctcctattt 27110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 40501326 - 40501273
Alignment:
Q  421 acacgtttgaattttttctagactctagttctcctttttgtacataaatctgat 474  Q
    ||||| |||| || ||| || |||||||||||||||||||||||||||||||||    
T  40501326 acacgcttgagttatttttaaactctagttctcctttttgtacataaatctgat 40501273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 803
Target Start/End: Original strand, 13401725 - 13401771
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||  ||||||||||||| || |||||||||||    
T  13401725 ctattttaaaaagagagtcgagcctcctattttacagggacggccct 13401771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 21784599 - 21784530
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| ||| |  |||||||||||||||||  || ||||||||||||  ||||||||||||    
T  21784599 ttacgttttattttactat-gacctattttaaaaagagagtcgaacctcctatttcagagggacggcccta 21784530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 799
Target Start/End: Complemental strand, 46791514 - 46791451
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 799  Q
    ||||||||||||||| ||  || ||||||||||  |||||| |||||||||||||||| |||||||    
T  46791514 ttacgttttattttactaggggcctattttaaa--gagagccgagcctcctatttcacagggacgg 46791451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 803
Target Start/End: Original strand, 54430817 - 54430862
Alignment:
Q  758 tattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||||| |||||||||| || |||||| ||||    
T  54430817 tattttaaaaagagagctgaacctcctattttacagggacgaccct 54430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 7857883 - 7858241
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||| || ||| ||| |||||||||||||||||| ||||||||||||  ||||||||||||    
T  7857883 gccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaattgctacgggcttctaacgaaaaattaaatttaatacccaccc--cacttaaataaa 7857980  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  7857981 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaatc 7858080  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||       |||| |||||||||||||||||    
T  7858081 acccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt 7858180  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||    
T  7858181 acccttttccacaacagaggagtgaaaaatccaaatgacaccgttagataaatttcacctc 7858241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 287 - 645
Target Start/End: Complemental strand, 18420879 - 18420518
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||| ||||||||||||  ||||||||  ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18420879 gccttgatggtgtgcaaggttttcaactaggtcgggcctccaaatgttacgggcttctaacgaaaaattaaatctaatacccaccctccacttaaataaa 18420780  T
Q  387 aaatatatat--gttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  18420779 aaatatatatatgttatatcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaa 18420680  T
Q  484 tcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtt 583  Q
     ||| | |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||       |||| |||||||||||||||    
T  18420679 ccacacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtt 18420580  T
Q  584 ttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    ||||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18420579 ttaccttttttcacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacct 18420518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 288 - 645
Target Start/End: Original strand, 13585098 - 13585454
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||| ||||||||||||||||||||  ||||||| ||| ||||||  || ||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  13585098 ccttaagggtgtgcaaggtgctcaatcagaccgggccttcaaatgcaacgggcctctaacgaaaaattaaatctaatacccaccccccatttaactaaaa 13585197  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    |||||||  |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||    
T  13585198 aatatat--gttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcctatcaaacca 13585295  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||    
T  13585296 cccctaatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta 13585395  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    ||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||    
T  13585396 cccttttccacaacagaggagtgacaagtccaaacgacgccgttagataaatttcacct 13585454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 43968334 - 43967978
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||| |||||||||||||||||  ||   || ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  43968334 ttgagagtgtgcaaggtgctcaatcaggttgggcctccaaatattacaggcctctaacgaaaaattaaatctaatacccaccccacacttaa-taaaaaa 43968236  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
     |||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||     
T  43968235 aatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccact 43968136  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacc 588  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||||     
T  43968135 cctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttact 43968036  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  43968035 cttttccacaacagaggagtgacaaatccaaacgacatccttagataaatttcacctc 43967978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 288 - 645
Target Start/End: Complemental strand, 44665308 - 44664955
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||| |||||||||||  |  |||| |||||||||| ||| ||||||||||| | |||||||||||||||||||||  |||||||||||||    
T  44665308 ccttgagggtgtgtaaggtgctcaatcaagccgggcctccaaatgctacgggcctctaacgcataattaaatctaatacccacccctcacttaaataaaa 44665209  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttcta--gactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||  |||||||| |||||||||||    |||||||||| |||||| ||  |||||||||||||||||||||||||||||| |||||||||||| |    
T  44665208 aatatat--gttatatctttttctttctt----acacgtttgagttttttttatagactctagttctcctttttgtacataaatcggatcctatcaaacc 44665115  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||    
T  44665114 acctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt 44665015  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  44665014 acccttttccacaacagaggagtgacaaatccaaacgataccattagataaatttcacct 44664955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 43926597 - 43926231
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||  ||  |||  |||||||||  || ||||||||| |||||||||||| |||||||||||  |||||||    
T  43926597 ggcccggccttgagggtgtgcaaggtgctcaatcaggtcgggtctccaaatgccacgggcctctaaggaaaaattaaatttaatacccacctcccactta 43926498  T
Q  381 aataaaaaatatatatgttatatcattttctttc-ttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatcct 477  Q
    ||||||||||||||||||||||||  ||| | || || ||||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||| ||||||    
T  43926497 aataaaaaatatatatgttatatc--tttatatcatttagtacacgtttgagttttttttctagactctagttctactttttgtatataaatcggatcct 43926400  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    |||||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| |||||||||    
T  43926399 atcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacca 43926300  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43926299 ttcgctttacccttttccacaatagaggagtgacaaatccaaacgacaccgttacataaatttcacctc 43926231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 281 - 645
Target Start/End: Original strand, 3471384 - 3471755
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||| ||| ||||||| |||||||| ||  |||||||||||||| ||| |||||| ||| ||||||||| | |||||||||||| |||||||    
T  3471384 ggcccggccttgggggagtgcaagatgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtgtaatacccaccccccactta 3471483  T
Q  381 aataaaaaatata-tatgttatatcattttctttcttcagtacacgtttgaatttttt------ctagactctagttctcctttttgtacataaatctga 473  Q
    ||||||||| | | ||||||||||||||||||||||||||||||| ||||| ||||||      ||||| |||||||||| ||||||||||||||| |||    
T  3471484 aataaaaaaaaaaatatgttatatcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgtga 3471583  T
Q  474 tcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataa 573  Q
    | |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| ||| |    
T  3471584 ttctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcatga 3471683  T
Q  574 accattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    ||||||| |||||||||||||||||| |||||||||| | |||||||||||||| |||||||||||||||||    
T  3471684 accattcattttacccttttccacaacagaggagtgatagatccaaacgacaccgttagataaatttcacct 3471755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 349 - 643
Target Start/End: Complemental strand, 32098383 - 32098090
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||||||||||    
T  32098383 aaaaattaagtctaatacccaccccccacttaattaaaaaatatatatgttacttctttttctttcttcagtacacgtttgagttttttctagactctag 32098284  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    || ||||||||| |||||||| |||| |||||||| ||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  32098283 ttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatcac 32098184  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    |||||| |        ||  ||||||||||||||||| ||| || |||||| ||||||||||| ||||||||||||||| |||  ||||||||||    
T  32098183 aacaattatttcttt-tttgcataaaccattcgttttccccattcccacaacagaggagtgacgaatccaaacgacaccgttacgtaaatttcac 32098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 287 - 594
Target Start/End: Complemental strand, 42952042 - 42951725
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||||||||||||||||| |  ||  ||||| || ||||| ||  ||| |||| |||||||||||||||||||||||||| |||||||||||||    
T  42952042 gccttgagggtgtgcaaggtgctcgatcagttcggacttctaaatgctatgggcttctagcgaaaaattaaatctaatacccaccccccacttaaataaa 42951943  T
Q  387 aaata-tatatgttatatcattttctttcttcagtacacgtttgaatttttt-----ctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||| | ||||||||||||||||||||||||| ||||||||||||| ||||||     |||||||||||||||| ||||||||||||||||  ||||||||    
T  42951942 aaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatcctatc 42951843  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat----cacaacaatcannnnnnncttcacataaacc 576  Q
    ||| ||| |||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||    |||||||||||       |||| ||||||||    
T  42951842 aaaccactcctaatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcacacacaacaatcatttttttcttcgcataaacc 42951743  T
Q  577 attcgttttacccttttc 594  Q
    ||||||||||||||||||    
T  42951742 attcgttttacccttttc 42951725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 392 - 646
Target Start/End: Original strand, 18112011 - 18112273
Alignment:
Q  392 tatatgttatatcattttctttcttcagtacacgtttgaatttttt-------ctagactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||       ||||| |||||||||| ||| |||||||||||| |||| |||||||     
T  18112011 tatatgttatatcattttctttctttagtatacgtttgagtttttttttctttctagaatctagttctcttttatgtacataaatcggatcatatcaaac 18112110  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgtt 583  Q
    ||| |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||        |||| |||||||||||||||    
T  18112111 cactcctaatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgtt 18112210  T
Q  584 ttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  18112211 ttacccttttccacaatagaggagtgacaaatccaaacgacaccgttagataaatttaacctc 18112273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 281 - 627
Target Start/End: Complemental strand, 34524208 - 34523879
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||| |||||||||||||||  |  ||||||||||||| | ||| ||||||  |  |||||||||||||||||||||||| |||||||    
T  34524208 ggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctacgggcctcaga--aaaaattaaatctaatacccaccc-ccactta 34524112  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||||||||| | || ||||||||||| | |||||    
T  34524111 aataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatc 34524025  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||| |||||||||||    
T  34524024 aaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttcttt-ttcatataaaccattc 34523926  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacacc 627  Q
    ||||| |||||| ||||||  ||  ||||||||||||||||||||||    
T  34523925 gttttcccctttcccacaacggataagtgacaaatccaaacgacacc 34523879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 289 - 470
Target Start/End: Original strand, 3445481 - 3445661
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||||||||  |||||||  || |||||| ||| ||  ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3445481 cttgagggtgtgcaaggtgctcaatgagaccgggtcttcaaatgctacgggtttctaacgaagaattaaatctaatacccaccc-ccacttaaataaaaa 3445579  T
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatc 470  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3445580 atatatatgttatatctttttctttctttagtacacgtttgaattttttttagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 281 - 608
Target Start/End: Original strand, 27074376 - 27074692
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||| ||||||| ||||||| |||| ||| ||| ||||||  |  | |||| ||| ||||||||| |||||||| ||| | | |||||    
T  27074376 ggcccggccttgagggagtgcaagatgctcaattagatcgggccttcaaatgcaatggacctcaaacaaaaaattaagtctaatactcactccctactta 27074475  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |  |          |   |||||||| ||||||||||||||||||||||||||||||    
T  27074476 aataaaaaa-atatatgttatatcattttctttcttcaatactcact----------ccctactctagtactcctttttgtacataaatctgatcctatc 27074564  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| ||||||||||||||||||||||||||  ||  |||||||||||||| ||||||||||||||       |||| |||||||||||     
T  27074565 aaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccattt 27074664  T
Q  581 gttttacccttttccacaagagaggagt 608  Q
    |||||||| |||||||||| ||||||||    
T  27074665 gttttacctttttccacaacagaggagt 27074692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 290 - 556
Target Start/End: Complemental strand, 5869579 - 5869320
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||||| ||||||||||||| || || |||| |||||||||| ||| |||||  ||   |||||||  ||||||||||||||||  || ||||||||||    
T  5869579 ttgagggagtgcaaggtgctctaccaggccgggcctccaaatggtactggcctaaaa---aaaattatgtctaatacccaccctcgtct-aaataaaaaa 5869484  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcaccc 489  Q
     | ||||||||  |  |||||||| ||||||||||| |||| |||||| |||||| |||||||||||| ||||||||||| |||| |||||||| ||||     
T  5869483 aa-atatgttacttatttttctttattcagtacacgattgagttttttttagactttagttctcctttctgtacataaat-tgatactatcaaaccacca 5869386  T
Q  490 ctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    | ||| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5869385 c-aatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 5869320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 3628889 - 3628747
Alignment:
Q  412 ttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaat 511  Q
    ||||||||||||||| ||| ||||||||||||||||||||| | || ||  ||||||| |||| |||||||| ||||  |||| ||||||||||| ||||    
T  3628889 ttcttcagtacacgtatgagttttttctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataat 3628790  T
Q  512 cagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  3628789 cagtcaatttgaaaagttatttcattgaaagaatcacaacaat 3628747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 488 - 646
Target Start/End: Original strand, 1004056 - 1004213
Alignment:
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagct-atttcattgaaagaatcacaacaatcannnnnnn-cttcacataaaccattcgtttt 585  Q
    ||||||| ||||||||||||||||||||||||||| |||  | |||||||||||||||||||||||||||        | || |||||||||||||||||    
T  1004056 ccctaatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgtttt 1004155  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| |||||||||||||   ||||||||||| ||||||||||||||||||    
T  1004156 acccttttccacaacagaggagtgacaa---caaacgacaccgttagataaatttcacctc 1004213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 420 - 624
Target Start/End: Complemental strand, 23567408 - 23567205
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    |||||||||||  |||||||||||| |||||||| | | || ||||||||||| | |||||||| |||||| ||| ||||||||||||||||||||||||    
T  23567408 tacacgtttgaggtttttctagactttagttctcttatctgaacataaatctgctactatcaaaccacccccaatttgtataatcacttaatcagtcaat 23567309  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||| ||  ||||||||||||||| ||||||||||| |        ||||||||||||||||||||| || ||| ||||||  ||  | ||||||||||||    
T  23567308 ttgaaatactatttcattgaaagtatcacaacaatgatttcttt-ttcacataaaccattcgtttttccttttcccacaacggataaatgacaaatccaa 23567210  T
Q  620 acgac 624  Q
    |||||    
T  23567209 acgac 23567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 420 - 624
Target Start/End: Original strand, 12531489 - 12531692
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| ||||||||||||| |||||||||| |  | ||||||||||  | ||||||||  ||| | ||| ||||||||||||||||||||||||    
T  12531489 tacacgtttgagttttttctagactttagttctcctatccgaacataaatcttgtactatcaaactacctccaatttgtataatcacttaatcagtcaat 12531588  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||  ||| |||||||||||||||||||||||||||||        ||||||||||||||| ||||| |||||| ||||||  ||  | |||||||| |||    
T  12531589 ttaaaaatctatttcattgaaagaatcacaacaatcatttcttt-ttcacataaaccatttgttttcccctttcccacaacggataaatgacaaattcaa 12531687  T
Q  620 acgac 624  Q
    |||||    
T  12531688 acgac 12531692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 348 - 626
Target Start/End: Complemental strand, 39698130 - 39697867
Alignment:
Q  348 gaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactcta 447  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| ||    
T  39698130 gaaaaattaactttaatacccacc-tccacttaaataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagacttta 39698045  T
Q  448 gttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
    |||||||| | |   ||||||| || | |||||||| |||| | ||| ||||| |||| ||||| |||||||||| ||||||||||||||||||||||||    
T  39698044 gttctcctatcttggcataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatca 39697945  T
Q  548 caacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacac 626  Q
    ||||||| |        || ||||||||||||||||||  ||||| ||||||  ||  ||||||||||||||| |||||    
T  39697944 caacaattatttcttt-tttacataaaccattcgttttcgcctttcccacaacggataagtgacaaatccaaatgacac 39697867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 380 - 556
Target Start/End: Complemental strand, 30915465 - 30915285
Alignment:
Q  380 aaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga---attttttctagactctagttctcctttttgtacataaatctgatcc 476  Q
    |||||||||| ||||||||||  |  |||||||||||| ||| || ||| |    |||||| ||||||||| ||||||||| || ||||| ||||||| |    
T  30915465 aaataaaaaaaatatatgttacttttttttctttcttcggtatacatttaagtttttttttttagactctaattctcctttctggacatagatctgatgc 30915366  T
Q  477 tatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcatt-gaaagaatcacaacaatca 556  Q
    || |||| | || | ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  30915365 taccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatca 30915285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 18111605 - 18111717
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||  ||  |||||||||||||| ||  || ||||| ||||||||||||||||| |||||||||| |||||    
T  18111605 ggcccggccttgagggtgtgcaaggtgctcaatcaggtcggacctccaaatgctatgggtctctatcgaaaaattaaatctaacacccaccctcaactta 18111704  T
Q  381 aataaaaaatata 393  Q
    |||||||||||||    
T  18111705 aataaaaaatata 18111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 1003958 - 1004055
Alignment:
Q  360 ctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga--attttttctagactctagttctcct 455  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||   ||||||| | ||||||||||||||    
T  1003958 ctaatacccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacatgtttgagttttttttcgaaactctagttctcct 1004055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 35874840 - 35874990
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac--ccctaatatgtataat 503  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || | |||||| |||| |||||||| |||      ||| ||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataat 35874939  T
Q  504 cacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||| ||||||||| ||| ||||||| | ||||||| |||||||||    
T  35874940 cacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 35874990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 349 - 643
Target Start/End: Original strand, 29372227 - 29372508
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||  |||||||||| |||||  |||||||||    ||||     ||| |||||| |||||| ||||||||| ||| |||    
T  29372227 aaaaattaagtctaatacccaccacccacttaaattaaaaaattatatgtta----atttggaaactttagtacatgtttgagttttttctaaactttag 29372322  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    || |||||| || |||||       | ||||||||  ||||  ||| |||||||||| ||||||||||||||||||||| ||||  ||||||||||| ||    
T  29372323 ttttcctttctggacata-------tgctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgac 29372415  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    ||||||||        ||| |||||||||||| |||| |||||| |||| |   ||||||||| |||||||||||||||||||| ||||||||||    
T  29372416 aacaatcatttattt-ttcgcataaaccattcattttcccctttgccacgatgaaggagtgac-aatccaaacgacaccattaggtaaatttcac 29372508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 349 - 646
Target Start/End: Original strand, 42777610 - 42777900
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatat--gttatatcattttctttcttcagtacacgtttgaattttttctagactct 446  Q
    ||||||||| ||||||| |||| | | |||||||||||||| ||||||  ||| | |  |||| ||| |||  ||||||||||||||||||||||| |||    
T  42777610 aaaaattaagtctaatatccacaccctacttaaataaaaaagatatatctgtttttttttttttttttttcgatacacgtttgaattttttctagattct 42777709  T
Q  447 agttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatc 546  Q
    | ||||||||| | ||||||||| ||||  ||||||| |||||| ||| |||         |||| ||||||||| ||||||||||| ||| ||||||||    
T  42777710 aattctcctttctatacataaatatgatgatatcaaaccacccccaatttgt--------gtaattagtcaatttagaaagctatttaattaaaagaatc 42777801  T
Q  547 acaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||        | | |||| ||||||||||||  | ||| ||||||  ||||||||||||| |||||| ||||| ||   |||||||||||||    
T  42777802 acaacaatcattttttt-tccgcatataccattcgttttctcatttcccacaacggaggagtgacaaaaccaaaccacaccgttcagtaaatttcacctc 42777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 349 - 450
Target Start/End: Complemental strand, 41666141 - 41666040
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga--attttttctagactct 446  Q
    ||||||||| ||||||||| ||||  ||||||||||||||||||||||||||  |||| |||||||||| ||||||||||||   |||||||||||||||    
T  41666141 aaaaattaagtctaataccaaccc--cacttaaataaaaaatatatatgttacttcatcttctttcttcggtacacgtttgagttttttttctagactct 41666044  T
Q  447 agtt 450  Q
    ||||    
T  41666043 agtt 41666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 554
Target Start/End: Complemental strand, 2546038 - 2545921
Alignment:
Q  436 ttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
    ||||||||||||||||||||| ||  |||||| ||  || ||||||||||||||| ||| | |||||||||||||||| |||| |||| ||| |||||||    
T  2546038 ttctagactctagttctccttatttgacataattcgcatgctatcaaatcaccccaaat-tatataatcacttaatcaatcaaattgggaagttatttca 2545940  T
Q  536 ttgaaagaatcacaacaat 554  Q
    ||||||  |||| ||||||    
T  2545939 ttgaaactatcaaaacaat 2545921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 377 - 556
Target Start/End: Original strand, 33452677 - 33452858
Alignment:
Q  377 cttaaataaaaa-atatatatgtta--tatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctga 473  Q
    |||||||||||| |||| |||||||  | || |||||||||||| ||||  |||||| |||||||||||||||| |||||  ||||| |||||||||| |    
T  33452677 cttaaataaaaatatatgtatgttacttttctttttctttcttcggtaccagtttgagttttttctagactctaattctc--ttttggacataaatctta 33452774  T
Q  474 tcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagcta-tttcattgaaagaatcacaacaatca 556  Q
    |  ||||||| |||| | ||| | |||||||||| ||| | |||||||| |||| || ||| ||  ||||||||||||||||||    
T  33452775 tggtatcaaaccacctccaatttatataatcactcaattaatcaatttgaaaagttattttaataaaaagaatcacaacaatca 33452858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 43926145 - 43926075
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| || ||| |||||||||||||||||| |||| ||||||||||| | ||||||||||    
T  43926145 ttacgttttattttactaaaggcctattttaaaaagagagccgagcttcctatttcacggagacggcccta 43926075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 734 - 801
Target Start/End: Original strand, 1004302 - 1004369
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 801  Q
    ||||||||||||||| ||| | ||||||||||||| ||||  |||||||||||||||| |||||||||    
T  1004302 ttacgttttattttactatggatctattttaaaaaaagagtcgagcctcctatttcacggggacggcc 1004369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 734 - 804
Target Start/End: Original strand, 7858329 - 7858399
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| ||  || |||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  7858329 ttacgttttattttactaggggcctattttaaaaagagagtcgagcctcctattccacggggacggcccta 7858399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 799
Target Start/End: Original strand, 3445777 - 3445842
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 799  Q
    ||||||||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||||    
T  3445777 ttacgttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacagggacgg 3445842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 13585550 - 13585619
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||| |||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||||||||    
T  13585550 ttacattttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacagggacggccct 13585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 18420425 - 18420356
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||   | |||||||||||||||||| |||||||||||||||| |||||| ||||    
T  18420425 ttacgttttattttactaggagactattttaaaaagagagccgagcctcctatttcacagggacgaccct 18420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 642
Target Start/End: Complemental strand, 36515202 - 36515069
Alignment:
Q  508 taatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggag 607  Q
    |||||||| |||||  ||| ||||||||||||||||||||||||||| |       |||| |||||| |||| ||||| || ||| | || |   |||||    
T  36515202 taatcagttaatttaaaaaactatttcattgaaagaatcacaacaattatttttttcttcgcataaatcatttgttttcccatttcctacgacgtaggag 36515103  T
Q  608 tgacaaatccaaacgacaccattagataaatttca 642  Q
    |||| | ||||||||||||| ||||||||||||||    
T  36515102 tgac-attccaaacgacaccgttagataaatttca 36515069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 42076114 - 42076165
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
    |||||||| ||||||||| |||||||| ||||||||  ||||||||||||||    
T  42076114 tgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatca 42076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 797
Target Start/End: Complemental strand, 44664423 - 44664360
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggac 797  Q
    ||||||||||||||| ||  |  |||||||||||||||||| ||||| |||||||||| |||||    
T  44664423 ttacgttttattttactagggacctattttaaaaagagagccgagccacctatttcacagggac 44664360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 3575212 - 3575170
Alignment:
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaa 431  Q
    ||||||||||||  |||||||||||| ||||||||||||||||    
T  3575212 atatatatgttacttcattttctttcgtcagtacacgtttgaa 3575170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 791
Target Start/End: Complemental strand, 42951591 - 42951557
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcac 791  Q
    |||||||||||||||||| ||||||||||||||||    
T  42951591 ctattttaaaaagagagccgagcctcctatttcac 42951557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 12531432 - 12531482
Alignment:
Q  348 gaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgtta 400  Q
    ||||||| || ||||||||||||||  ||||||||||||||||| ||||||||    
T  12531432 gaaaaatcaactctaatacccaccc--cacttaaataaaaaatagatatgtta 12531482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 23567464 - 23567418
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatg 397  Q
    ||||||||| ||| ||||||||  |||||||||||||||||||||||||    
T  23567464 aaaaattaactctgatacccac--tccacttaaataaaaaatatatatg 23567418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 791
Target Start/End: Original strand, 27074718 - 27074775
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||| |  |||||||||||||| ||| ||||||| ||||||||    
T  27074718 ttacgttttattttactatggacctattttaaaaagatagccgagcctcatatttcac 27074775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 288 - 646
Target Start/End: Original strand, 45618774 - 45619132
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||||||||||||||||| | || |||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  45618774 ccttgagggtgtgcaaggtgctcagccaggccgggcctccaaatgctacgggcctctaacgaaaaat-aaatctaatacccaccccccatttaaataaaa 45618872  T
Q  388 aa-tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagact-ctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    || ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |    
T  45618873 aaatatatatgttatatccttttctttctttagtatacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaacc 45618972  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||| ||||||||||| |||||    
T  45618973 acccctaatttgtataatcacttaatcagtcaatttgg-aagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatttgtttt 45619071  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  45619072 acccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 45619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 26152020 - 26151655
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||||||||||| |||||||| ||  ||| |||||||||| ||| || |||||||||||||| ||||||||||||||||| ||| |||    
T  26152020 ggcccggccttgagggtgtgcaagatgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaaat-aaatctaatacccaccc-ccattta 26151923  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagact-ctagttctcctttttgtacataaatctgatccta 478  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  26151922 aataaaaaatatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatccta 26151823  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccat 578  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||    
T  26151822 tcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccat 26151723  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  26151722 tcgttttacccttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 26151655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 290 - 643
Target Start/End: Original strand, 7993433 - 7993786
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||   |||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||| | | ||||||||||||    
T  7993433 ttgagggtgtgcaaggtgctcaatctgaccgggcctccaaatgctacag-cctctaacgaaaaattaaatttaatacccaccccctatttaaataaaaaa 7993531  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcaccc 489  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  7993532 tatatatgttatatccttttctttctttagtacacatttgagttttttctagactctagttctcctttttgtacataaaccggatcctatcaaaccaccc 7993631  T
Q  490 ctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc-annnnnnncttcacataaaccattcgttttacc 588  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||||    
T  7993632 ctaatttgtataatcacttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgttttacc 7993731  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  7993732 cttttccacaatagaggagtgacaaatccaaacgacaccgttagataaatttcac 7993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 287 - 646
Target Start/End: Complemental strand, 18676579 - 18676218
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||| |||||||||||||||||| || |||| | |||||||| ||| ||  |||||||||||||||||||||||||||||||  ||||||||||||    
T  18676579 gccttgagagtgtgcaaggtgctcaaccaggccgggcatccaaatgctacgggtttctaacgaaaaattaaatctaatacccacccctcacttaaataaa 18676480  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||      
T  18676479 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaact 18676380  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgttt 584  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        |||  ||||||||||||||||    
T  18676379 acccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttctttgcataaaccattcgttt 18676280  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  18676279 tacccttttccacaaaagaggagtgacaaattcaaacgacaccgttagataaagttcacctc 18676218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 41096806 - 41096445
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||| |||||||||||| |||||  || ||||||||| ||||| ||| || ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  41096806 ccttgaaggtgtgcaaggtactcaatcaggccggacctctaaatgctacgggtctctaacgaaaaattaaatttaatacccaccccccacttaaataaaa 41096707  T
Q  388 a-atatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    | |||||||||||||||| ||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41096706 atatatatatgttatatccttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatc 41096607  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgttt 584  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||| ||| ||||||||||||    
T  41096606 acccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgttt 41096507  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41096506 tacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 41096445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 42411831 - 42411466
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || |||||||||||||||||||||||  || |||| ||||||| || ||   ||||||||||||||||||||||||||||||| || |||||||    
T  42411831 ggcccggcattgagggtgtgcaaggtgctcaatcaggccgggcctccaattgctaagagcctctaacgaaaaattaaatctaatacccaacccccactta 42411732  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    || |||| |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42411731 aaaaaaatatatatatgttatatccttttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctatc 42411632  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||       |||| ||||||||||||    
T  42411631 aaaccacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcattttttacttcgcataaaccattc 42411532  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||| |||||    
T  42411531 gttttaccctttttcacaacagaggagtgaaaaatccaaacgacaccgttagataaatttaacctc 42411466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 290 - 646
Target Start/End: Complemental strand, 19367683 - 19367327
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||| ||  ||| |||||||||| ||| || |||||||||||| |||||||||||||| | || ||| ||||||||||||    
T  19367683 ttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaa-ttaaatctaatacctatcccccatttaaataaaaaa 19367585  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  19367584 tatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacc 19367485  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacc 588  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||  |||||||||||||||||||    
T  19367484 cctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccattcgttttacc 19367385  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||    
T  19367384 cttttccacaacagtggagtgacaaattcaaacgacaccgttagataaatttcacctc 19367327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 13020212 - 13020579
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| ||  ||| ||||||| || ||| |||||||||||||||||||||| |||||||||||| |||||||    
T  13020212 ggcccggccttgagggtgtgcaaggtgctcaaccagggcgggcctccaattgctacgggcctctaacgaaaaattaaatttaatacccaccc-ccactta 13020310  T
Q  381 aataaaaaa-tatatatgttatatcattttctttcttcagtacacgtttgaatttt--ttctagactctagttctcctttttgtacataaatctgatcct 477  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||  |||||||||||||||||| |||||||||||||||| ||||||    
T  13020311 aataaaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcct 13020410  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |       |||| |||||||||    
T  13020411 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaataatttttttcttcgcataaacca 13020510  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||| |||| ||||| |||||||||| |||| |||| |||||| ||||||||||||||||||    
T  13020511 ttcgttttaccttttttcacaacagaggagtgaaaaattcaaatgacaccgttagataaatttcacctc 13020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 287 - 643
Target Start/End: Original strand, 25222119 - 25222476
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||| || |||||||||||| || |||| |||||||||| ||| |||||||||||||||||||||||||||||| |||  | |||||||||||    
T  25222119 gccttgagggtatgaaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaataccgaccgcctacttaaataaa 25222218  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  25222219 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatc 25222318  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    |  |||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||    
T  25222319 attcctaatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt 25222418  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    |||||||| ||||| ||||||||||||||| ||||| ||||| ||| |||||||||||    
T  25222419 accctttttcacaacagaggagtgacaaattcaaacaacaccgttatataaatttcac 25222476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 289 - 646
Target Start/End: Original strand, 36481204 - 36481550
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36481204 cttgagggtgtgcaaggtgctcaaccaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 36481303  T
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||| || ||||||||| |||||||||||||||||||||  |||||| ||||| ||||    
T  36481304 atatatatgttatatcattttctttctt-agtacacatttgagtttcttttagactctaattctcctttttgtacataaattggatcctttcaaaccacc 36481402  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacc 588  Q
    |||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||       |||| |||||||||||| |||||||    
T  36481403 cctaatttgtataatcacttaa----------tggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcattttacc 36481492  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  36481493 cttttccacaacagaggagtgacaaatccaaacgacaccggtagataaatttcacctc 36481550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 4855786 - 4856149
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||| || ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  4855786 gccttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctctaacgaaaaat-aaatctaatacccaccctccatttaaataaa 4855884  T
Q  387 aaa-tatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactct-agttctcctttttgta-cataaatctgatcctatca 481  Q
    ||| |||||||||||||||  ||||||||||  |||||||||||| ||||||  ||||| | | |||||||||||||||| |||||||| ||||||||||    
T  4855885 aaaatatatatgttatatccctttctttctttcgtacacgtttgagttttttttctagatttttagttctcctttttgtaacataaatcagatcctatca 4855984  T
Q  482 aatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcg 581  Q
    || |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||    
T  4855985 aaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg 4856084  T
Q  582 ttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||| |||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||    
T  4856085 ttttaaccttttccacaacagaggagtgacaaatccaaacgacattgttagataaatttcacctc 4856149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 287 - 642
Target Start/End: Original strand, 6530456 - 6530811
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  6530456 gccttgagggtgtgtaaggtgctcaacgagaccggacctctaaatgatacgggcctctaacgaaaaattaaatctaatatccaccc-ccacttaaataaa 6530554  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    ||||||||| |||||||| ||||||||||| |||| | |||| | |||| |||||||||||||||||| |||||||||||||||| ||| |||||||| |    
T  6530555 aaatatatacgttatatccttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaacc 6530654  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||    
T  6530655 acccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcattattttcttcgcataaaccattcgtttt 6530754  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    | ||| |||||||| |||||||||||| || |||||| |||  ||||||||||||||    
T  6530755 atcctattccacaacagaggagtgacagattcaaacgtcactgttagataaatttca 6530811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 287 - 639
Target Start/End: Complemental strand, 42760015 - 42759671
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaat-aa 385  Q
    ||||||||||||| ||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||| ||    
T  42760015 gccttgagggtgtacaaggtgctcaactaggtcgggcctccaaatgctacaggcctctaacgaaaaattaaatctaatatccacc--ccacttaaataaa 42759918  T
Q  386 aaaatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||| |||||||     
T  42759917 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcatatcaaac 42759818  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    ||||| |||| | ||        |||||||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  42759817 cacccataattttta--------taatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttt 42759726  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatt 639  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||    
T  42759725 tacccttttccacaatagaggggtgacaaattcaaacgacaccgttagataaatt 42759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 298 - 646
Target Start/End: Original strand, 2063616 - 2063961
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatg 397  Q
    |||||||||| ||||| ||||||| |||||||||  ||| |||||| ||| ||||||||| ||||||||||||||  |||||||||||| || | | ||     
T  2063616 gtgcaaggtgttcaaccagaccgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccc--cacttaaataaataaaaaa-ata 2063712  T
Q  398 ttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatg 497  Q
    ||||||| |||||||||||| ||| |||||||| |||||| |||||||||||| |||||||||||||||||| | ||||||||||| |||||||||| ||    
T  2063713 ttatatccttttctttcttcggtatacgtttgagttttttttagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttg 2063812  T
Q  498 tataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccac 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          | || ||||||||||||||||| ||||||||    
T  2063813 tataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcccgcaaaaaccattcgttttacctttttccac 2063912  T
Q  598 aagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  2063913 aacagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 2063961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 343 - 646
Target Start/End: Original strand, 12269279 - 12269580
Alignment:
Q  343 ctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctaga 442  Q
    ||||||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||    
T  12269279 ctaacgaaaaattaaatctaatatccaccc-cagcttaaataaaaaatatatatgttatatcattttttttctttagtacacatttgaattttttttaga 12269377  T
Q  443 ctctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaag 542  Q
    ||||||||||| |||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||     
T  12269378 ctctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagt-gatttggaaagctatttcattaaaaa 12269476  T
Q  543 aatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    |||||| |||||||       ||||||||||||||||||||||| | |||||||||  |||||| |||||||| ||||||||||| ||||||||||||||    
T  12269477 aatcaccacaatcatttttttcttcacataaaccattcgttttatctttttccacagcagaggaatgacaaattcaaacgacaccgttagataaatttca 12269576  T
Q  643 cctc 646  Q
    ||||    
T  12269577 cctc 12269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 290 - 645
Target Start/End: Original strand, 45042187 - 45042545
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    ||||||| | |||||||||||||  ||  ||| |||||||||||||  |||||| ||| ||||||||| |||||||||||| |   | ||||||||||||    
T  45042187 ttgagggagcgcaaggtgctcaatcaggtcgggcctccaaatgttatgggcctcaaacaaaaaattaagtctaatacccactccttatttaaataaaaaa 45042286  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaatttt--ttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
     |||||||| |||||||||||||||||||||| |||||||| ||||  ||||||||||||||||| ||||| |||||||||| ||||||||||||| |||    
T  45042287 aatatatgtcatatcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccac 45042386  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttg--gaaag-ctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    ||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||       |||| |||||||||||||  |    
T  45042387 ccctaatttgtataatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg--t 45042484  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    ||||||||||||||| ||||||||||||||| |||||||||   || ||||||||||||||    
T  45042485 tacccttttccacaacagaggagtgacaaattcaaacgacattgttggataaatttcacct 45042545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 395 - 625
Target Start/End: Complemental strand, 34062015 - 34061789
Alignment:
Q  395 atgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaat 494  Q
    |||||||||| ||||||||||||||||||||| ||| |||||| |||||| ||||||| ||||||||||||||||||| |||||||||| ||||| ||||    
T  34062015 atgttatatctttttctttcttcagtacacgtatgagttttttttagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataat 34061916  T
Q  495 atgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttc 594  Q
     ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||| |||||||||||||||    
T  34061915 ttgtatgattacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttacccttttc 34061816  T
Q  595 cacaagagaggagtgacaaatccaaacgaca 625  Q
    |||    || |||||||||||||||||||||    
T  34061815 cac----gatgagtgacaaatccaaacgaca 34061789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 349 - 624
Target Start/End: Complemental strand, 18173130 - 18172871
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| ||     
T  18173130 aaaaattaactctaatacccaccc-ccacttaaataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagacttta- 18173046  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| | || ||||||||||| | |||||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  18173045 ttctcctatatggacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcac 18172946  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgac 624  Q
    ||||||||        ||||||||||||||||||||| |||||| ||||||  ||  |||||||||||||||||||    
T  18172945 aacaatcatttcttt-ttcacataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaacgac 18172871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 361 - 643
Target Start/End: Complemental strand, 31273357 - 31273078
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttg 460  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||| || ||||| |||||| || |||| || |||||||| ||    
T  31273357 taatacccaccc-ccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttttttgtatactccagctctcctttctg 31273259  T
Q  461 tacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnn 560  Q
     || ||||| ||||  ||||||| |||||| ||| |||||||||| |||||||||||||||||||  |||||||||| ||||||||| |||| |||        
T  31273258 gacttaaatttgatgttatcaaaccacccc-aatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatcataacattcatttc 31273160  T
Q  561 nnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
        ||| ||||||||||| ||||| | |||| |||||| |||  |||||||||||||||||||||  |||| ||||||||||    
T  31273159 ttt-ttcgcataaaccatttgtttttctctttcccacaacagaaaagtgacaaatccaaacgacacagttaggtaaatttcac 31273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 281 - 624
Target Start/End: Original strand, 15457308 - 15457634
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||| | |||||||||||||||  |  |||| |||||||| ||||  ||||||    |||||||||| |||||||||||||| |||||||    
T  15457308 ggcccggccttgagagagtgcaaggtgctcaatcaagccgggcctccaaaagttatgggcctca---gaaaaattaactctaatacccaccc-ccactta 15457403  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||||| | | |  | ||||||||||| | |||||    
T  15457404 aataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttcacttatccggacataaatctggtactatc 15457490  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    |||  ||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |        |||||| |||||||||    
T  15457491 aaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaataattttttttttcacacaaaccattc 15457590  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgac 624  Q
    ||||| |||||| ||||||  ||  |||||||||||||||||||    
T  15457591 gttttcccctttcccacaacggacaagtgacaaatccaaacgac 15457634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 361 - 554
Target Start/End: Original strand, 39081271 - 39081462
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttg 460  Q
    ||||||||| || |||||||||| |||||  || ||||||  || |||| |||||||||||||||| ||| ||||||||||||||||||| | |||| ||    
T  39081271 taatacccatcc-ccacttaaattaaaaaattacatgttac-tctttttttttcttcagtacacgtatgagttttttctagactctagttttactttctg 39081368  T
Q  461 tacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
     |||||||| |||| |||||||| ||||   ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  39081369 gacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaat 39081462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 1418832 - 1418973
Alignment:
Q  412 ttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaat 511  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||  |||||| | |||| |||||||| ||||   ||| ||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttttctagactctagttctactttttagacataatt-tgatgctatcaaaccaccatcaatttgtataatcacttaat 1418930  T
Q  512 cagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  1418931 cagtcaatttgtaaagctatttcattgaaagaatcacaacaat 1418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 349 - 632
Target Start/End: Complemental strand, 17117828 - 17117568
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||             ||||  ||||||||||||||||||||||| | |||    
T  17117828 aaaaattaaatctaatactcaccc-ccacttaaataaaaaatatatatgtta-------------cttctttacacgtttgaattttttctagattttag 17117743  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
     |||||| | || ||||||||||| | |||||||| |||||| ||| ||||||||||        ||||||||| |||||||||||||||||||||||||    
T  17117742 ctctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatca--------gtcaatttgaaaagctatttcattgaaagaatcac 17117651  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||||||        |||| |||||||||||||||| |||||| ||||||  ||  |||||||||||||||||||||| ||||    
T  17117650 aacaatcatttcttt-ttcatataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaacgacaccgttag 17117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 420 - 624
Target Start/End: Complemental strand, 21747364 - 21747161
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    |||||||||||  |||||||||||| ||||||| || | || ||||||||||| | |||||||| |||||| ||| ||||||||||||||||||||||||    
T  21747364 tacacgtttgaggtttttctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaat 21747265  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||  ||  |||| |||||||||||||||||||||| |        ||||||||||||||||||||| |||||| |||||| |||  ||||| |||| |||    
T  21747264 ttaaaatactatgtcattgaaagaatcacaacaat-aatttctttttcacataaaccattcgtttttccctttcccacaacagataagtgagaaattcaa 21747166  T
Q  620 acgac 624  Q
    |||||    
T  21747165 acgac 21747161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 363 - 556
Target Start/End: Complemental strand, 36060095 - 36059903
Alignment:
Q  363 atacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgta 462  Q
    |||||||||| |||||||||| |||||  || ||||||  || |||||||||||  |||| ||| | | ||||||||||||||||||||| ||||||  |    
T  36060095 atacccaccc-ccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttttttctagactctagttctactttttaga 36059997  T
Q  463 cataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    || |||| |||| |||||||| ||||   ||| |||||||||||||||||||| |||||  ||||||||||||||||||||| |||||||||||    
T  36059996 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattgaaagaaccacaacaatca 36059903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 420 - 620
Target Start/End: Complemental strand, 38985842 - 38985644
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| ||||||||| ||| || ||||||| | || |||||||| || | |||||||| |||| | ||| |||||||||| ||||||| |||||    
T  38985842 tacacgtttgagttttttctaaacttta-ttctcctatctggacataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaat 38985744  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||| |||||||||||||||||||||||||||||||||        |||||||||| |||| ||||| |||||||||||||  ||  ||||||||||||||    
T  38985743 ttgaaaagctatttcattgaaagaatcacaacaatcatttcttt-ttcacataaaacatttgttttccccttttccacaacggataagtgacaaatccaa 38985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 349 - 556
Target Start/End: Complemental strand, 18916245 - 18916052
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||         |||| ||    ||||||||||  |||||||||||| |||    
T  18916245 aaaaattaactctaatacccaccc-ccacttaaataaaaaatatatatgtta---------ctttttt----acacgtttgaggtttttctagactttag 18916160  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    |||| |  | || ||||||||||| | |||||||| || ||| ||| |||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  18916159 ttcttcaatctggacataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcac 18916060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 351 - 556
Target Start/End: Complemental strand, 1226465 - 1226264
Alignment:
Q  351 aaattaaatctaatacccaccctccacttaaataaaaaa--tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||| ||||||||| || | ||||||||||||||||  |||||||||||     || | ||||||| |||||||||||| ||||||||||||||||     
T  1226465 aaattaagtctaatacc-acaccccacttaaataaaaaaaatatatatgtta----cttctttttcttcggtacacgtttgagttttttctagactctaa 1226371  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc-attgaaagaatca 547  Q
    ||||||  |||| ||||||||||||| ||| |||| |||||  ||| | |||||||||| |||||| ||||||| |||| |||||| ||  |||||||||    
T  1226370 ttctcc--tttggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatttcaataaaaagaatca 1226273  T
Q  548 caacaatca 556  Q
    |||||||||    
T  1226272 caacaatca 1226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 556
Target Start/End: Complemental strand, 27302661 - 27302526
Alignment:
Q  421 acacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatt 520  Q
    |||| ||||| |||||||||||||||| |||| || | || ||| ||||  ||| ||| ||||||||||  ||| ||||||||||||||||| |||||||    
T  27302661 acacatttgagttttttctagactctaattcttctgtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatt 27302562  T
Q  521 tggaaagctatttcattgaaagaatcacaacaatca 556  Q
    || |||||||| ||||| ||||||||||||||||||    
T  27302561 tgaaaagctatatcattaaaagaatcacaacaatca 27302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 376 - 554
Target Start/End: Original strand, 13997204 - 13997378
Alignment:
Q  376 acttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatc 475  Q
    ||||||||||||||  |||||||||     |||| ||| |||| ||||||| ||| ||||| |||||||||||||   |||| || |||||||| ||||     
T  13997204 acttaaataaaaaaattatatgttac----ttttttttattcaatacacgtatgagtttttcctagactctagtttcactttctggacataaatttgatg 13997299  T
Q  476 ctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||  || ||||   ||| || ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  13997300 ctattgaaccaccgtcaatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaat 13997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 349 - 554
Target Start/End: Original strand, 38599261 - 38599466
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| | ||||| ||| ||| || |||||| |||||  || ||||||  || |||||||||||| |||||  | ||| ||||||||  |||| ||    
T  38599261 aaaaattaagtataatatccatccttcatttaaattaaaaaattacatgttacttctttttctttcttcggtacaactatgagttttttcttaactcaag 38599360  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||  ||| || | |||||| |||| |||||||||||     ||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||||     
T  38599361 ttctattttatggatataaatttgatgctatcaaatcattatcaatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaa 38599460  T
Q  549 aacaat 554  Q
    ||||||    
T  38599461 aacaat 38599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 41096359 - 41096290
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  41096359 ttacgttttattttactaggggtctattttaaaaagagagccgagcctcctatttcacagggacggccct 41096290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 406 - 626
Target Start/End: Original strand, 13001560 - 13001772
Alignment:
Q  406 ttttctttcttcagtacacgttt-gaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatc 504  Q
    |||||||| ||| ||| |||||| || ||||||||| |||||| ||||||||||| ||||||||| |||| |||||||| |||||| ||| ||||         
T  13001560 ttttcttttttcggtatacgttttgagttttttctaaactctaattctcctttttatacataaatttgatgctatcaaaccacccccaatttgta----- 13001654  T
Q  505 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttca-cataaaccattcgttttacccttttccacaagaga 603  Q
       |||| |||||||||  |||||||||||||| |||||||||||| |||||        ||||  ||| || |||||||||  ||||| |||||| | |    
T  13001655 ---taattagtcaatttataaagctatttcattaaaagaatcacaataatcatttttt--ttcagtatatacaattcgttttctcctttcccacaacaaa 13001749  T
Q  604 ggagtgacaaatccaaacgacac 626  Q
    |||||||||||||||||||||||    
T  13001750 ggagtgacaaatccaaacgacac 13001772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 29480777 - 29480637
Alignment:
Q  414 cttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatca 513  Q
    |||||||| |||| ||| |||||| |||||| ||||||  |||| || |||||||| |||| |||| ||| ||||   ||| || |||| |||||| |||    
T  29480777 cttcagtagacgtatgatttttttttagactttagttcaactttctggacataaatttgatgctattaaaccaccatcaatttgaataaacacttattca 29480678  T
Q  514 gtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||| |||  ||||||||||||||||||||||||||    
T  29480677 gtcaatttgaaaaattatttcattgaaagaatcacaacaat 29480637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 550
Target Start/End: Original strand, 9029472 - 9029664
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaat-aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactcta 447  Q
    ||||||||| ||||||| |||| | |||||||||| |||||||||||||||||| ||  ||| ||| ||| ||| | |||||| |||||| |||||||||    
T  9029472 aaaaattaagtctaatatccacaccccacttaaataaaaaaatatatatgttatttc--ttttttttttcggtatatgtttgagttttttttagactcta 9029569  T
Q  448 gttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
     ||||||||| |  |||||||| || | |||||||| || ||| ||| ||||        |||| ||||||||| ||||| ||||||||| |||||||||    
T  9029570 attctcctttctagacataaatatgttgctatcaaagcagccccaatttgta--------taattagtcaatttagaaagttatttcattaaaagaatca 9029661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 26151567 - 26151498
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || ||||||||||||||||||  ||||||||||||||| |||||||||||    
T  26151567 ttacgttttattttactaggggcctattttaaaaagagagccaagcctcctatttcacggggacggccct 26151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 802
Target Start/End: Complemental strand, 42759575 - 42759507
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccc 802  Q
    ||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||| | ||||||||    
T  42759575 ttacgttttattttactatggacctattttaaaaagagggctgagcctcctatttcacggagacggccc 42759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 2064049 - 2064118
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  |  ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  2064049 ttacgttttattttactacggacctattttaaaaagagagttgagcctcctatttcacaggaacggccct 2064118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 4856237 - 4856306
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  4856237 ttacgttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacggggacgaccct 4856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 18676129 - 18676060
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||| ||||||||||||||||| |||||||| |||||| ||||    
T  18676129 ttacgttttattttactaggggcctattttataaagagagctgagcctcttatttcacagggacgaccct 18676060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 791
Target Start/End: Complemental strand, 34061685 - 34061628
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||  ||  ||||||||||||||||||||||||||||||||||    
T  34061685 ttacgttttattttactaggggcttattttaaaaagagagctgagcctcctatttcac 34061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 45042635 - 45042704
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||| |||||||||||||||| |||| ||  ||| |||||||| |||||||||||    
T  45042635 ttacgttttattttactatgggtctattttaaaaagtgagccgattctcatatttcacagggacggccct 45042704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 45619220 - 45619289
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||  ||||||| |||||||| |||||||||||    
T  45619220 ttacgttttattttactaagggcctattttaaaaagagagtcgagcctcgtatttcacggggacggccct 45619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 361 - 488
Target Start/End: Complemental strand, 32186342 - 32186216
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttg 460  Q
    ||||| |||||| ||| |||||| |||||  || ||||||  || |||||||||||| | |||  | ||| ||||||||||||||||||||| ||||||     
T  32186342 taatatccaccc-ccaattaaattaaaaaattacatgttacttctttttctttcttcggcacatatatgagttttttctagactctagttctacttttta 32186244  T
Q  461 tacataaatctgatcctatcaaatcacc 488  Q
     |||||||| |||| |||||||| ||||    
T  32186243 gacataaatttgatgctatcaaaccacc 32186216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 791
Target Start/End: Original strand, 6530906 - 6530963
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||   | |||||||||||||||||| ||||||||||||||||    
T  6530906 ttacgttttattttaataggagcctattttaaaaagagagccgagcctcctatttcac 6530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 13020666 - 13020735
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||| || |||||||||  || |||||||||||    
T  13020666 ttacgttttattttactaggggcctattttaaaaagagagccgaacctcctattctacggggacggccct 13020735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 19367244 - 19367175
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||   | |||||||||||||||||   ||||||||||||||| |||||||||||    
T  19367244 ttacgttttattttactaggagcctattttaaaaagagagtcaagcctcctatttcacagggacggccct 19367175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 739 - 803
Target Start/End: Complemental strand, 17117460 - 17117396
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||||||||    
T  17117460 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacggccct 17117396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 802
Target Start/End: Complemental strand, 21747046 - 21746983
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccc 802  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||  ||||||||||    
T  21747046 ttttattttattggagacctattttaaatagagagccgagcctcctatttcatagggacggccc 21746983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 801
Target Start/End: Original strand, 36481639 - 36481706
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 801  Q
    ||||||||||||||| || | | ||||||||||||||||||  | |||||||| |||| |||||||||    
T  36481639 ttacgttttattttactagaagactattttaaaaagagagccaaacctcctatgtcacagggacggcc 36481706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 38985899 - 38985849
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgtta 400  Q
    ||||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  38985899 aaaaattaactctaataccccacc-ccacttaaataaaaaatatatatgtta 38985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 646
Target Start/End: Original strand, 9029707 - 9029749
Alignment:
Q  604 ggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  9029707 ggagtgacaaatccaaacgacaccgtttggtaaatttcacctc 9029749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 739 - 800
Target Start/End: Original strand, 15457751 - 15457812
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggc 800  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||  ||||||||    
T  15457751 ttttattttattgaagacctattttaaatagagagccgagcctcctatttcatagggacggc 15457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-123; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 33909863 - 33910220
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||| |||||||||||||||||||| || |||| |||||||||| ||| |||||| ||| ||||||||| ||||||||||||||  ||||||||||||    
T  33909863 gccttgggggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccacccctcacttaaataaa 33909962  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    ||| | ||||||||||||  ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33909963 aaaaa-atatgttatatc--tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatc 33910059  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttt 585  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| |||||||||||||||||    
T  33910060 acccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt 33910159  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||    
T  33910160 acccttttccacaacagaggaattacaaatccaaacgacaccgttagataaatttcacctc 33910220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 296 - 646
Target Start/End: Complemental strand, 18015839 - 18015488
Alignment:
Q  296 gtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatata 395  Q
    ||||||||| |||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18015839 gtgtgcaagatgctcaaccaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-ccacttaaataaaaaatatata 18015741  T
Q  396 tgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaata 495  Q
    ||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||     
T  18015740 tgttatatccttttctttctttagtacatgtttgagttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatt 18015641  T
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca--nnnnnnncttcacataaaccattcgttttaccctttt 593  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |         |||| ||| |||||||||||||||||||||    
T  18015640 tgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattatttttttttcttcgcattaaccattcgttttaccctttt 18015541  T
Q  594 ccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
     ||||| |||  |||||||||| ||||||||||| || |||||||||||||||    
T  18015540 acacaacagaaaagtgacaaattcaaacgacaccgtttgataaatttcacctc 18015488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 46221969 - 46221611
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  46221969 ccttgagggtgtgcaaggtgctcaactaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccaccc-ctacttaaataaaa 46221871  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||| ||||||||||||||||  |||||||||||  |    
T  46221870 aatatatatgttatatcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaacta 46221771  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||    
T  46221770 cccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttattcgcataaaccattcgtttta 46221671  T
Q  587 cccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || |||||||||| ||| || ||||||||||||| || | | |||||||||||| |||||    
T  46221670 ccattttccacaacagaagaatgacaaatccaaatgatatcgttagataaattttacctc 46221611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 42161389 - 42161030
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||||||||||||||||||||| || |||  |||||||||| ||| |||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  42161389 ccttgagggtgtgcaaggtgctcaaccaggccgagcctccaaatgctacgggcctctaacgaaaaattaaatttaatatcctccccccacttaaataaaa 42161290  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcc--tatcaaat 484  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||| |||||||||||||||  |||||  |||||||     
T  42161289 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcctatatcaaac 42161190  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||       |||| ||||||||||||||||    
T  42161189 cacccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcacagcaa-ca-atttttcttcgcataaaccattcgttt 42161092  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  42161091 tacctttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 42161030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 36796636 - 36796279
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    |||||||| ||||||||||||||||| || |||| |||||||||  ||| | ||||||||||||||| ||||||||||||||||  ||| ||||||||||    
T  36796636 ccttgaggctgtgcaaggtgctcaaccaggccgg-cctccaaatactacggacctctaacgaaaaat-aaatctaatacccacctcccatttaaataaaa 36796539  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagact-ctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||  |    
T  36796538 aatatatatgttatatcattt-ctttctttagtacacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaacta 36796440  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgtttt 585  Q
    ||| |||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||        |||| |||||||||||||||||    
T  36796439 cccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgtttt 36796340  T
Q  586 acccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  36796339 acccttttccacaacagaggagtgacaaatcaaaacgacaccgttagataaatttcacctc 36796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 33419390 - 33419025
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||| ||||||| ||| |||||||||| || ||||  |||||||| |||| | |||||||||||||||||||||||||| ||||||  ||||||    
T  33419390 ggcccggcctcgagggtgagcatggtgctcaaccaggccgggtctccaaatattacggtcctctaacgaaaaattaaatctaataaccaccc--cactta 33419293  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctat 479  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||| |||||||||||||||  |||||||||||||||| ||||||||    
T  33419292 aataaaaaatatatatgttatatccttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatcctat 33419193  T
Q  480 caaatcacccctaatatgtataatcacttaatca-gtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccat 578  Q
    ||||  ||||||||| |||||||||||||||| | ||||||||| |||| |||||||||||||||||||||| |||||       |||| ||||||||||    
T  33419192 caaactacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatcatttttttcttcgcataaaccat 33419093  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  33419092 tcgttttaccattttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctc 33419025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 281 - 646
Target Start/End: Complemental strand, 6380358 - 6379992
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || ||||||| | |||||||||| ||| || |||| |||||||||   ||||||||| ||| ||||||||| ||||||| |||| | | |||||    
T  6380358 ggcccggctttgagggagcgcaaggtgcttaaccaggccgggcctccaaataccacaggcctcaaacaaaaaattaagtctaatatccactccctactta 6380259  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatccta 478  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  6380258 aataaaaaa-atatatgttatatcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatccta 6380160  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccat 578  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||       |||| ||||||||||    
T  6380159 tcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatcatatttttcttcgcataaaccat 6380060  T
Q  579 tcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   || |||||||||||||||    
T  6380059 tcgttttacccttttccacaacagaggagtgacaaatccaaacgacattgttggataaatttcacctc 6379992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 338 - 646
Target Start/End: Original strand, 11672431 - 11672742
Alignment:
Q  338 ggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga-attttt 436  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||    
T  11672431 ggcctttaacgaaaaattaaatctaatatccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacatttgagtttttt 11672530  T
Q  437 tctagactctagttctcctttttgtac--ataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc 534  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||||    
T  11672531 tctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatttc 11672630  T
Q  535 attgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagat 634  Q
    | ||||||||||||||||||||       |||| |||||| |||||||||||| ||||||||||| |||||||||||||||| |||||||| | || |||    
T  11672631 aatgaaagaatcacaacaatcatttttttcttcgcataaatcattcgttttactcttttccacaacagaggagtgacaaatctaaacgacatcgtttgat 11672730  T
Q  635 aaatttcacctc 646  Q
    ||||||||||||    
T  11672731 aaatttcacctc 11672742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 324 - 625
Target Start/End: Original strand, 4099801 - 4100104
Alignment:
Q  324 ctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtaca 423  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4099801 ctccaaatgctacgggcttctaacgaaaaattaaatttaatacccacctcccacttaaataaaaaatatatatgttatatccttttctttctttagtaca 4099900  T
Q  424 cgtttga--attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaattt 521  Q
    |||||||   |||||||||||| ||| |||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  4099901 cgtttgagttttttttctagacgctaattctcctttttgtacataaatcggat-ctatcaaaccacccctaatttgtataatcacttaatcaatcaattt 4099999  T
Q  522 ggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcg-ttttacccttttccacaagagaggagtgacaaatccaaa 620  Q
    | |||||||||||||||||||||| ||||||||||       |||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4100000 gaaaagctatttcattgaaagaattacaacaatcatttttttcttcgcaaaaaccattcgtttttacccttttccacaacagaggagtgacaaatccaaa 4100099  T
Q  621 cgaca 625  Q
    |||||    
T  4100100 cgaca 4100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 290 - 556
Target Start/End: Complemental strand, 8358558 - 8358292
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||| | || |||| |||||||||| ||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  8358558 ttgagggtgtgcaaggtgctcatccaggccgggcctccaaatgctacgggcctctaacaaaaaattaaatctaatatccaccctc-acttaaataaaaaa 8358460  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  8358459 tatatatgttatatcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaaccacc 8358360  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    |||||| | ||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  8358359 cctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatca 8358292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 44894299 - 44893937
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatac----ccaccctccacttaaat 383  Q
    |||||||| ||| |||| |||||||| ||  ||| |||||||||| ||| |  ||||||  ||||||||||||||||||    ||||||  || ||||||    
T  44894299 ccttgaggatgtacaagatgctcaaccaggtcgggcctccaaatgctacggatctctaagaaaaaattaaatctaatacatacccacccctcatttaaat 44894200  T
Q  384 aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaa 482  Q
    ||||||||||||||||||||| || | |  ||| ||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||| |||||||| ||    
T  44894199 aaaaaatatatatgttatatctttatatc-ctttagtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatcctattaa 44894101  T
Q  483 atcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgt 582  Q
    | |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||       |||||||||||||||||||    
T  44894100 accacccctaatttgtataatcacttaatcaatcaatttggaaagctattttattgaaagaatcacaacaatcatttttttcttcacataaaccattcgt 44894001  T
Q  583 tttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||  | |||||| |||||| ||||||||||| ||| ||||||||||||||    
T  44894000 tttacccttttccacagcaaaggagttacaaattcaaacgacaccgttacataaatttcacctc 44893937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 349 - 645
Target Start/End: Complemental strand, 7636536 - 7636234
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt------ctaga 442  Q
    ||||||||| ||||| |||||||  |||||||||||||||| |||| ||||||||| |||||||| ||| |||||||||| | ||||||      |||||    
T  7636536 aaaaattaagtctaacacccacctcccacttaaataaaaaa-atatgtgttatatctttttcttttttcggtacacgtttaagtttttttttcttctaga 7636438  T
Q  443 ctctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaag 542  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  7636437 ctctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaag 7636338  T
Q  543 aatcacaacaatca-nnnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttc 641  Q
    |||| |||||||||        |||| ||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||||||||    
T  7636337 aatcgcaacaatcattttttttcttcccataagccattcgttttacccttttccacaacagaagagtgacaaattcaaacgataccgttagataaatttc 7636238  T
Q  642 acct 645  Q
    ||||    
T  7636237 acct 7636234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 287 - 476
Target Start/End: Complemental strand, 12251655 - 12251466
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||||||||||||| |||||  || ||||||||||||||| |||  ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  12251655 gccttgagggtgtgcaaggtactcaatcaggccggacctccaaatgctacgagcctctatcaaaaaattaaatctaatacccaccctccacttaaataaa 12251556  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcc 476  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  12251555 aaatatatatgttatctcattttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 477 - 646
Target Start/End: Complemental strand, 12251365 - 12251196
Alignment:
Q  477 tatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacc 576  Q
    ||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacc 12251266  T
Q  577 attcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  12251265 attcgttttacccttttccacaacagaggagtgacaaatccaaacgtcaccgttagataaatttcacctc 12251196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 290 - 450
Target Start/End: Original strand, 38524984 - 38525145
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||||||| || |||| |||||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38524984 ttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccactctccacttaaataaaaaa 38525083  T
Q  390 tatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagtt 450  Q
    ||||||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||    
T  38525084 tatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagtt 38525145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 386 - 645
Target Start/End: Original strand, 32956670 - 32956929
Alignment:
Q  386 aaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttct-agactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    |||| ||||||||||  || |||||||||||| |||||||||||| |||||| | |||||||||||||||||| || ||||||||||||| ||||||||     
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    |||||| ||| | |||||||| |||||||||||||||  |||| |||||||||||||||||||||||||| |        ||| ||||||||||||||||    
T  32956770 cacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaatcacaacaatgatttcttt-ttcgcataaaccattcgttt 32956868  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    | |||||| ||||||  || ||||||||||||||||||||||  |||| ||||||||||||    
T  32956869 tcccctttcccacaacggatgagtgacaaatccaaacgacactgttaggtaaatttcacct 32956929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 281 - 556
Target Start/End: Complemental strand, 26282799 - 26282540
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||| ||||||||| |||||  |  |||| |||||||| | || |||||||  |  ||||||||| |||||||||||||| |||||||    
T  26282799 ggcccggccttgagggagtgcaaggtactcaatcaagccgggcctccaaaagctataggcctcaga--aaaaattaactctaatacccaccc-ccactta 26282703  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||||||||| | || ||||||||||| | |||||    
T  26282702 aataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttctcctatctgcacataaatctggtactatc 26282616  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26282615 aaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 26282540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 406 - 646
Target Start/End: Original strand, 26633279 - 26633517
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||| |||| || |||||||| |||| |||| ||| ||||   ||| ||||||||||    
T  26633279 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctggacataaatttgatgctataaaaccaccatcaatttgtataatca 26633378  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagagg 605  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||        ||| |||||||||||| |||| |||||| |||| |   | |    
T  26633379 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttcttt-ttcgcataaaccattcatttttccctttcccacgacgtatg 26633477  T
Q  606 agtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||| | ||||||||||||| |||  |||||||||||||    
T  26633478 agtgac-attccaaacgacaccgttaagtaaatttcacctc 26633517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 288 - 544
Target Start/End: Original strand, 25061702 - 25061957
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||| ||| |||||||||||||||| |  |||||||||||||| |||  |||||  ||  ||||||||| ||||||| |||||| | ||||||||||||    
T  25061702 ccttgggggagtgcaaggtgctcaaccaagccggacctccaaatattatgggcctaaaaa-aaaaattaagtctaatatccaccccctacttaaataaaa 25061800  T
Q  388 aatata-tatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    || | | |||||||  || |||||||||||| |||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||  |    
T  25061801 aaaaaaatatgttacttctttttctttcttcggtacacgttttaatttttt-tagactctagttcttctttttggacataaatctgatgctatcaaacta 25061899  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaa 544  Q
      |  ||| |||| |||||||| |||||| |||||| |||||||||||||||||||||    
T  25061900 ttctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 349 - 556
Target Start/End: Complemental strand, 40001887 - 40001694
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| |||||||||||||| | |||||||||||||||||||||||||             ||||  |||||||||||  |||||||||||| |||    
T  40001887 aaaaattaactctaatacccaccc-ctacttaaataaaaaatatatatgtta-------------cttctttacacgtttgaggtttttctagactttag 40001802  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    |||| || | || ||||||||||| | |||||||| |||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40001801 ttcttctatctgaacataaatctggtactatcaaaccacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcac 40001702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 359 - 646
Target Start/End: Original strand, 41908046 - 41908332
Alignment:
Q  359 tctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctccttt 457  Q
    ||||||||||||||||   |||||||||||| | ||||||||  || |||||||||||| ||||| |||||| |||||| || |||||| |||||| |||    
T  41908046 tctaatacccaccctctttttaaataaaaaaaa-atatgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattt 41908144  T
Q  458 tt-gtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    || | ||||||||||||| || ||||| |||| | ||| |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  41908145 tttggacataaatctgatgctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatca 41908244  T
Q  557 nnnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
            ||| |||||| || |||| ||  |||||| ||| |  ||||||||||| |||||||||| | | ||||||||||||||||||    
T  41908245 tttcttt-ttcgcataaa-cactcgtattctcctttttcactacggaggagtgacagatccaaacgatatcgttagataaatttcacctc 41908332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 305 - 643
Target Start/End: Complemental strand, 774121 - 773795
Alignment:
Q  305 gtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa-atatatatgttatat 403  Q
    ||||||||||| |||||||||||||| |||| ||| ||| ||  ||||||| | ||| |||| ||||||  ||||||||||||| | |||| |||||  |    
T  774121 gtgctcaactaaaccggacctccaaaagttataggtctcaaaataaaaatttagtctgatactcaccctt-acttaaataaaaataaatatttgttactt 774023  T
Q  404 cattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataat 503  Q
    | |||||||||||||||||| |||||| |||            |||| || ||| || | ||||||||||| ||||||||||||||||||| ||||||||    
T  774022 ctttttctttcttcagtacatgtttgacttt------------agttatcatttctggaaataaatctgatgctatcaaatcacccctaatttgtataat 773935  T
Q  504 cacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnnctt-cacataaaccattcgttttacccttttccacaagag 602  Q
     |||| ||||||||||||| |||||||||| ||||||||||||||||||||||        ||   ||||||||||||||||| |||||| | ||||  |    
T  773934 tactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcattttttttttgtgcataaaccattcgtttt-ccctttccaacaacgg 773836  T
Q  603 aggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    |||||| |||||| |||||||| || |||| ||||||||||    
T  773835 aggagtcacaaattcaaacgacgccgttaggtaaatttcac 773795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 349 - 645
Target Start/End: Complemental strand, 40841454 - 40841155
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaa---aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactc 445  Q
    ||||||||| | |||||||||| | ||||| ||||||||   || |||||||||   || |||||||||||||||||| |||||| ||||||||||||||    
T  40841454 aaaaattaagtttaatacccacaccccactgaaataaaataaaaaatatatgtttcttctttttctttcttcagtacatgtttgagttttttctagactc 40841355  T
Q  446 tagttctcctttttgtacataaatctgatcctatcaaatcacc-cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaa 544  Q
    || || | ||||||| |||||||| ||||  ||||||| |||| |||||| |||||||| ||||||  | |||||||  |||| ||||  ||| ||||||    
T  40841354 taattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataattacttaactaatcaatttataaagttattctattaaaagaa 40841255  T
Q  545 tcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacc 644  Q
    | |||||| |||        ||| ||||||||||||||||| |||||| | ||||  ||| |||||||||||||||||| ||||||||  ||||||||||    
T  40841254 ttacaacactcatttcttt-ttcgcataaaccattcgttttcccctttcctacaacggagaagtgacaaatccaaacgagaccattaggaaaatttcacc 40841156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 411 - 645
Target Start/End: Complemental strand, 36438494 - 36438262
Alignment:
Q  411 tttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaa 510  Q
    ||||||||||||| || ||| |||||||||| |||||||||| |||| || |||||||| |||| |||||||| |||    ||| |||||||||||||||    
T  36438494 tttcttcagtacaggtatgagttttttctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaa 36438395  T
Q  511 tcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc-acaagagaggagtg 609  Q
    |||||||||||| ||| | ||||||||||||||||||||||||| |        ||||||||||||||||||||| ||||||||| || |   |||||||    
T  36438394 tcagtcaatttgaaaaaccatttcattgaaagaatcacaacaat-aatttatttttcacataaaccattcgtttt-cccttttcctacgacgtaggagtg 36438297  T
Q  610 acaaatccaaacgacaccattagataaatttcacct 645  Q
    || | |||||| |||||| |||| ||||||||||||    
T  36438296 ac-attccaaatgacaccgttaggtaaatttcacct 36438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 349 - 646
Target Start/End: Original strand, 30738986 - 30739278
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactcta 447  Q
    ||||||||| |||||||| ||| |  ||||||||||||||| |     ||||  || |||||||| ||| |||||||||||| |||||| ||||| || |    
T  30738986 aaaaattaagtctaatacacacaccacacttaaataaaaaaaa-----gttacttctttttcttttttcggtacacgtttgagtttttttctagattcca 30739080  T
Q  448 gttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
     ||||||||| || ||||||||| ||| |||||||| || |   ||| | ||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  30739081 attctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatcacttaatcagtcaatttgaaaagttatttcattaaaagaatca 30739180  T
Q  548 caacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| ||||        ||| ||||||| ||| ||||| ||||||| |||||  | ||||||||||||||||| |||||| || | |||||||||||||    
T  30739181 caacgatcatttcctt-ttcgcataaacaattagttttcccctttttcacaacggcggagtgacaaatccaaatgacaccgtttggtaaatttcacctc 30739278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 361 - 554
Target Start/End: Original strand, 9479002 - 9479191
Alignment:
Q  361 taatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttg 460  Q
    |||||||||| |||||||||||| |||||  || ||||||     |||| |||||| | ||||||| ||| ||||||||| ||||||||||| |||| ||    
T  9479002 taatacccactctccacttaaattaaaaaattacatgttac----ttttttttctttaatacacgtatgatttttttctaaactctagttctactttctg 9479097  T
Q  461 tacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
     |||||||| |||| |||||||| ||||   ||| |||||||| |||||||||||||||||  ||| ||||||| |||||||||||||||||||    
T  9479098 gacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgttgaaagaatcacaacaat 9479191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 420 - 599
Target Start/End: Original strand, 1365939 - 1366117
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| ||| ||||||||| |||||||||| | || |||||||| || | |||||||| |||  | |||  ||||||| |||||||||||||||    
T  1365939 tacacgtttgagtttcttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaat 1366038  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaa 599  Q
    ||| |||| |||||||| |||||||||||||||||||        ||||||||||||||||||||| |||||| ||||||    
T  1366039 ttgaaaagttatttcatagaaagaatcacaacaatcatttcttt-ttcacataaaccattcgttttcccctttcccacaa 1366117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 356 - 551
Target Start/End: Complemental strand, 40738187 - 40737994
Alignment:
Q  356 aaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcct 455  Q
    |||| |||||||||||| |||||||||| |||||  || ||||||  |  |||| ||| ||| |||| ||| ||| ||||||||| ||||||||||| ||    
T  40738187 aaatataatacccaccc-ccacttaaattaaaaaattacatgttacgttttttt-tttattcggtacgcgtatgagttttttctaaactctagttctact 40738090  T
Q  456 ttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaac 551  Q
    ||||  |||||||| |||| |||||||| ||||   ||| |||||||| |||||||||||||||||  |||||||||| |||||||||||||||||    
T  40738089 tttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttattgaaagaatcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 18895545 - 18895397
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    ||||||| ||||  ||||||| ||| |||||||||||||| |||||| ||| ||  |||||||| ||||  ||||||| |||   |||| ||||||||||    
T  18895545 ttttcttccttcgatacacgtatgagttttttctagactcgagttctacttattagacataaatttgatgttatcaaaccactattaatttgtataatca 18895446  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
     |||||||||||||||  |||| ||||||||||||||||||||||||||    
T  18895445 attaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaat 18895397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 411 - 626
Target Start/End: Complemental strand, 44876292 - 44876087
Alignment:
Q  411 tttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaa 510  Q
    ||||||||||| | | |||| |||||| |||||||||||||||||    |||||||||| |||| |||||||| | | || ||| | || ||||| ||||    
T  44876292 tttcttcagtatatgattgagttttttttagactctagttctcct----gtacataaat-tgatactatcaaaccgcacc-aatttttaaaatcatttaa 44876199  T
Q  511 tcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtga 610  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||       |  | |||||||||||||||||  || |||||||||   ||||||||    
T  44876198 tcagtcaatttagaaagctatttcattaaaagaatcacaacaatcatttttttc--cgcataaaccattcgtttt--ccctttccacaatgaaggagtga 44876103  T
Q  611 caaatccaaacgacac 626  Q
    ||||||||||||||||    
T  44876102 caaatccaaacgacac 44876087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 27432390 - 27432489
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||||||||||| |||||||||||| || || | ||| |||||| ||| |||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  27432390 ccttgagggtgtgtaaggtgctcaaccaggcccggccttcaaatgctacgggcctctaacgaaaaattaaatttaatacccaccccacacttaaataaaa 27432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 41852469 - 41852212
Alignment:
Q  383 taaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaa 482  Q
    ||||||| ||||||||||  |  |||||| |||| | ||||||||||  ||||||||||||| ||||||||||||  | |  ||||| || | |||| ||    
T  41852469 taaaaaaaatatatgttacttatttttctctctttaatacacgtttgggttttttctagactttagttctcctttcaggatgtaaatatggtgctataaa 41852370  T
Q  483 atcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgt 582  Q
    | ||| || ||| | |||||||||||| |||||||||||  | || |||||||||||||||||| ||||| |||        ||  ||||||  |||| |    
T  41852369 accactcc-aattt-tataatcacttactcagtcaatttaaagagttatttcattgaaagaatcgcaacactcatttcttttttg-cataaataattcat 41852273  T
Q  583 tttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    ||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||    
T  41852272 tttccccttttccacaacggaggagtgacaaattcaaacgacaccgttagataaatttcac 41852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 423 - 646
Target Start/End: Original strand, 42311943 - 42312163
Alignment:
Q  423 acgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttg 522  Q
    |||||||| |||||||||||||||| ||||| ||| || |||||||||||||  || ||||  ||||   || ||||||||||||| || ||||||||||    
T  42311943 acgtttgagttttttctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcacttgattagtcaatttg 42312041  T
Q  523 gaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacg 622  Q
     |||||||||||||| |||||||||||||| |||        ||| | ||||  ||||||||| ||| |||||||||  || ||| |||||||| |||||    
T  42312042 aaaagctatttcattaaaagaatcacaacagtcatttattt-ttcgcttaaataattcgtttt-cccctttccacaacggatgagcgacaaatctaaacg 42312139  T
Q  623 acaccattagataaatttcacctc 646  Q
    ||||| |||  |||||||||||||    
T  42312140 acaccgttaagtaaatttcacctc 42312163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 406 - 646
Target Start/End: Complemental strand, 3799906 - 3799671
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    ||||||||||||| ||| ||||||  ||| || |||| | |||||||||||| || |  ||||| |||| || ||||| |||| | ||  ||||||||||    
T  3799906 ttttctttcttcattacgcgtttgggtttcttttagattttagttctcctttctggat-taaatttgatgct-tcaaaccacctccaaattgtataatca 3799809  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagagg 605  Q
     ||||| || |||||| | ||||||||||||||||||||||||||||||||       |  | ||||||||||||||||||    || ||||||  ||||    
T  3799808 tttaataagccaattttggaagctatttcattgaaagaatcacaacaatcatttttttc--cgcataaaccattcgttttagaaattcccacaatggagg 3799711  T
Q  606 agtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || | ||||||||||||||||| |||| |||||||||||||    
T  3799710 agcg-caaatccaaacgacaccgttaggtaaatttcacctc 3799671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 33910309 - 33910378
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  33910309 ttacgttttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccct 33910378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 7366612 - 7366751
Alignment:
Q  415 ttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcag 514  Q
    ||||| |||||| ||| ||||||||| ||||||||||  |||| || |||||||| ||||  ||| ||| ||||   ||| || ||||| |||||||  |    
T  7366612 ttcagcacacgtatgagttttttctatactctagttccactttctggacataaatttgatgatattaaaccaccatcaatttgaataattacttaatttg 7366711  T
Q  515 tcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||||||| ||| |||||| ||||||||||||||||||||    
T  7366712 tcaatttgaaaaactattttattgaaagaatcacaacaat 7366751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 44893847 - 44893778
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||||||  | ||||||||||||||||||  |||||||||||||||| | |||||||||    
T  44893847 ttacgttttattttattaaggatctattttaaaaagagagtcgagcctcctatttcacggagacggccct 44893778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 349 - 646
Target Start/End: Complemental strand, 28590347 - 28590053
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacac--gtttgaattttttctagactct 446  Q
    ||||||||| ||||||| ||||  ||||||||| ||||||  | |||||||   |  |||||||||||| ||| ||  |||||| ||||||||||| | |    
T  28590347 aaaaattaagtctaatatccacattccacttaattaaaaacaaaatatgttgcttttttttctttcttccgtatacatgtttgagttttttctagatt-t 28590249  T
Q  447 agttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatc 546  Q
    |||| |||||| || ||| ||||  ||| ||| |||| |||||| ||| | |||||| ||||||| ||| | |||  ||  |||||||||| ||||||||    
T  28590248 agttatcctttctggacaaaaatacgatgctaccaaaccacccccaatttatataattacttaattagttactttttaa--ctatttcattaaaagaatc 28590151  T
Q  547 acaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||||||| |        ||| | ||| ||||||||||| |||||| ||||||  ||||||||||||||||||||||||   |||| |||| ||||||||    
T  28590150 acaacaattatttcttt-ttcgcgtaa-ccattcgttttcccctttcccacaacggaggagtgacaaatccaaacgacattgttaggtaaaattcacctc 28590053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 6379904 - 6379834
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||||| ||| || ||||||||||||| |||| ||||||| |||||||| |||||| |||||    
T  6379904 ttacgttttattttactatgggcctattttaaaaagtgagccgagcctcatatttcacagggacgacccta 6379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 42160942 - 42160873
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  | |||||||||||||||||||  | ||||||||||||| |||||||||||    
T  42160942 ttacgttttattttactaaggatctattttaaaaagagagcataacctcctatttcacagggacggccct 42160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 790
Target Start/End: Original strand, 4100205 - 4100261
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttca 790  Q
    ||||||||||||||| || || ||||||||||||||||||| || ||||||||||||    
T  4100205 ttacgttttattttactagagatctattttaaaaagagagccgaacctcctatttca 4100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 632
Target Start/End: Original strand, 25610091 - 25610207
Alignment:
Q  515 tcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaa 614  Q
    |||||||| ||||  |||||||||||||||||||||||||||        ||||||||||||| | ||||| |||||| ||||||  ||   ||||||||    
T  25610091 tcaatttgaaaagtcatttcattgaaagaatcacaacaatcatttcttt-ttcacataaaccaatagttttcccctttcccacaatggataggtgacaaa 25610189  T
Q  615 tccaaacgacaccattag 632  Q
    ||||||||||||| ||||    
T  25610190 tccaaacgacaccgttag 25610207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 12251104 - 12251034
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaa-gagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| || ||| |||||||||||| || ||  |||||||||||||||| |||||||||||    
T  12251104 ttacgttttattttactagaggcctattttaaaaaagatagtcgagcctcctatttcacagggacggccct 12251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 738 - 788
Target Start/End: Original strand, 32957016 - 32957066
Alignment:
Q  738 gttttattttattataggtctattttaaaaagagagctgagcctcctattt 788  Q
    |||||||||||||  ||| ||||||||||||||||| ||||||||||||||    
T  32957016 gttttattttattggaggcctattttaaaaagagagttgagcctcctattt 32957066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 11672835 - 11672904
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  ||||||||||||||||||| | || ||||| ||||||| |||| ||||||    
T  11672835 ttacgttttattttactaggggtctattttaaaaagagaaccgaacctccaatttcacggggatggccct 11672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 791
Target Start/End: Complemental strand, 36796191 - 36796134
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    |||| |||||||||| ||  | ||||||||||||||||||||||| ||||||||||||    
T  36796191 ttacattttattttactagggatctattttaaaaagagagctgagtctcctatttcac 36796134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 44877067 - 44877006
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcct 342  Q
    ||||| |||||||||| ||||||||||||| ||||| |||| ||| |||||||||| |||||    
T  44877067 ggcccggccttgagggagtgcaaggtgctctactaggccgggccttcaaatgttacgggcct 44877006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 25609964 - 25610014
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgtta 400  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| |||||||    
T  25609964 aaaaattaactctaatacccacc-tccatttaaataaaaaatatgtatgtta 25610014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 803
Target Start/End: Complemental strand, 44875956 - 44875910
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||    
T  44875956 ctattttaaaaagagagtcgagcctcctatttcatagggacggccct 44875910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 1365882 - 1365932
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaata-aaaaatatatatgtta 400  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||||||||||||    
T  1365882 aaaaattaactctaatacccacc--ccacttaaatataaaaatatatatgtta 1365932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 739 - 804
Target Start/End: Original strand, 1366258 - 1366323
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 804  Q
    ||||||||||||   | ||||||||||| ||||||| |||||| ||||||||  ||||||||||||    
T  1366258 ttttattttattggggatctattttaaatagagagccgagccttctatttcatagggacggcccta 1366323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 223; Significance: 1e-122; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 287 - 646
Target Start/End: Original strand, 16501 - 16866
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16501 gccttgagggtgtgcaaggtgctcaaccagaccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaa 16600  T
Q  387 aaatatatatgt-tatatcat---tttctttc-ttcagtacacgtttgaatttt-ttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    | |||||||| | ||||| ||   ||| | || || ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  16601 agatatatatatatatattatatctttatatcctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatc 16700  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||       |||| ||||||||||||    
T  16701 aaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacgatcatatttttcttcgcataaaccattc 16800  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  16801 gttttacccttttccacaacagaggagtaacaaatccaaacgacaccgttagataaatttcacctc 16866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 798
Target Start/End: Original strand, 16955 - 17019
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacg 798  Q
    ||||||| ||||||| ||  || ||||||||||||||||| ||||||||||||||||| ||||||    
T  16955 ttacgttatattttactaggggcctattttaaaaagagagttgagcctcctatttcacggggacg 17019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 281 - 646
Target Start/End: Original strand, 13423651 - 13424020
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| ||||||||||||||||||||||||||| || | || |||||||||||||| |||||||||||||||||||||||||||||| | |  |||||||    
T  13423651 ggccccgccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacctatctcccactta 13423750  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga----attttttctagactctagttctcctttttgtacataaatctgatcc 476  Q
    |||||||||||||||||||||||| ||||||||||| || |||||| |||     |||||| ||||||||||||||| |||||||||||||||| |||||    
T  13423751 aataaaaaatatatatgttatatccttttctttctttagcacacgtatgagttttttttttttagactctagttctcttttttgtacataaatcggatcc 13423850  T
Q  477 tatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacc 576  Q
    ||||||| ||  |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||       |||| ||||||||    
T  13423851 tatcaaaccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacc 13423950  T
Q  577 attcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| || |||||||||||||||    
T  13423951 attcgttttacccttttccacaatagaggagtgacaaatctaaacgacaccgttcgataaatttcacctc 13424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 290 - 646
Target Start/End: Original strand, 13474427 - 13474786
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaa 389  Q
    |||||||||||||||||||| ||| || | ||  ||||||||||||  ||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  13474427 ttgagggtgtgcaaggtgcttaaccaggctgggtctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccc--cacttaaataaaaaa 13474524  T
Q  390 ----tatatatgttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
        ||||||| |||||||||||| |||||| ||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| ||||||||||||     
T  13474525 aaaatatatatattatatcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaac 13474624  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    |||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  13474625 cacccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttt 13474724  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  13474725 tacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaattttacctc 13474786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 338 - 646
Target Start/End: Original strand, 13656056 - 13656366
Alignment:
Q  338 ggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt 437  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  13656056 ggcctctaacgaaaaattaaatctaataaccacc-tccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttt 13656154  T
Q  438 ctagactctagttctcctttttgtacataaatctgatcct---atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttc 534  Q
    ||||||||||||||||||||||||||||||||| ||||||   |  ||| || ||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  13656155 ctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataatcacttaatcagtcaatttgaaaagttatttc 13656254  T
Q  535 attgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagat 634  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||| ||||||    
T  13656255 attgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttctacaacagaggagtgtcaaattcaaacgacaccgttagat 13656354  T
Q  635 aaatttcacctc 646  Q
    ||||||||||||    
T  13656355 aaatttcacctc 13656366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 289 - 643
Target Start/End: Original strand, 12661102 - 12661462
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||| ||| | |||| | | ||||||||||||||||| | ||||||||||||||||||||    
T  12661102 cttgagggtgtgcaaggtgctcaaccagatcgggcctccaaatgctacggacctcaatcaaaaaattaaatctaatatctaccctccacttaaataaaaa 12661201  T
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag------ttctcctttttgtacataaatctgatcctatcaa 482  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||      || |  |||||||| ||||||| ||| |||||||    
T  12661202 atatatatgttatttcattttctttctttagtacacgtttgagttttttctagactctagtttttttttttttttttgtatataaatcggattctatcaa 12661301  T
Q  483 atcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgt 582  Q
    | |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||    
T  12661302 accacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaatattttttttcttcgcataaaccattcgt 12661401  T
Q  583 tttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  12661402 tttacccttttccacaacagaggagtgacaaatccaaacgacactgttagataaatttcac 12661462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 289 - 642
Target Start/End: Complemental strand, 26378042 - 26377685
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctcc-acttaaataaaa 387  Q
    ||||||||||||||||||||||||| ||  ||| ||| |||||  ||| || |||||||||||||||||||||||||  ||||| || ||||||||||||    
T  26378042 cttgagggtgtgcaaggtgctcaaccaggtcgggccttcaaattctacgggtctctaacgaaaaattaaatctaataatcacccccccacttaaataaaa 26377943  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatcctatcaaatc 485  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |    
T  26377942 aatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatcctatcaaacc 26377843  T
Q  486 acccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-nnnnnnncttcacataaaccattcgttt 584  Q
    ||||||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||        |||| ||||||||||||||||    
T  26377842 acccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttcgcataaaccattcgttt 26377743  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttca 642  Q
    |||| |||| |||||  |||||||||||||||||||||||||| ||||||||||||||    
T  26377742 taccttttttcacaactgaggagtgacaaatccaaacgacaccgttagataaatttca 26377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 288 - 646
Target Start/End: Complemental strand, 19099582 - 19099222
Alignment:
Q  288 ccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa 387  Q
    ||||| ||| |||||||||||||||| ||  ||| |||||||||  ||| |||||| ||| ||||||||| |||||||||||||| ||| ||||||||||    
T  19099582 ccttgtgggagtgcaaggtgctcaaccaggtcgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccccatttaaataaaa 19099483  T
Q  388 aatatatatgttatatcattttctttcttcagtacacgtttgaattttttct---agactctagttctcctttttgtacataaatctgatcctatcaaat 484  Q
    || | || ||||||||| ||||| || ||| | ||| |||||| |||||| |   ||||| ||||||||||||||||||||||||||||||||||||||     
T  19099482 aaaa-atgtgttatatccttttcctttttcggcacatgtttgagtttttttttttagactatagttctcctttttgtacataaatctgatcctatcaaac 19099384  T
Q  485 cacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttt 584  Q
    || ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  19099383 catccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttt 19099284  T
Q  585 tacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    || |  |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||    
T  19099283 tatcactttccacaaccgagaagtgacaaatccaaacgacaccgttagataaatttcacctc 19099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 281 - 551
Target Start/End: Complemental strand, 36718841 - 36718570
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| || |||||| |||||||||||||||||||| |||| ||||| |||| ||| || |||||||||||||| ||||||||||| | | | |||||||    
T  36718841 ggcccggctttgaggatgtgcaaggtgctcaactaggccgggcctccgaatgctacgggtctctaacgaaaaat-aaatctaatactctctccccactta 36718743  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactctagttctcctttttgtacataaatctgatccta 478  Q
    |||||||||||||||||||||||  |||||||| || ||||||||| ||| ||||||  |||||||||||||||||||||||||||| |||| |||||||    
T  36718742 aataaaaaatatatatgttatattcttttctttttttagtacacgtgtgagttttttttctagactctagttctcctttttgtacatgaatcggatccta 36718643  T
Q  479 tcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaac 551  Q
    ||||| |||||||||| |||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||    
T  36718642 tcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagttattttattgaaagaatcacaac 36718570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 290 - 494
Target Start/End: Original strand, 8398778 - 8398985
Alignment:
Q  290 ttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa- 388  Q
    |||||||||||||||||||||||  || ||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||     
T  8398778 ttgagggtgtgcaaggtgctcaatcaggccggacctccaaatgctacgggcccctaacgaaaaattaaatctaatactcaccccccacttaaataaaaaa 8398877  T
Q  389 -atatatatgttatatcattttctttcttcagtacacgtttga-attttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
     |||||||||||||||| ||||||||||| |||||||||||||  |||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||    
T  8398878 tatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcggatcctatcaaacca 8398977  T
Q  487 cccctaat 494  Q
    ||||||||    
T  8398978 cccctaat 8398985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 281 - 632
Target Start/End: Original strand, 43511425 - 43511759
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    ||||| |||||||||| |||||||||||||||  |  ||||||||||||| | ||  ||||||  |  ||||||||||||||||||||||| ||||||||    
T  43511425 ggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctatgggcctcaga--aaaaattaaatctaatacccacc-tccactta 43511521  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatc 480  Q
    ||||||||||||||||||||             ||||  ||||||||||| ||||||||||||| |||||||||| | || ||||||||||| | |||||    
T  43511522 aataaaaaatatatatgtta-------------cttctttacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatc 43511608  T
Q  481 aaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattc 580  Q
    ||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||        |||| |||||||||||    
T  43511609 aaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcatttcttt-ttcatataaaccattc 43511707  T
Q  581 gttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||| |||||| ||||||  ||  |||||||||||||||||||||| ||||    
T  43511708 gtttttccctttcccacaacggataagtgacaaatccaaacgacaccgttag 43511759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 338 - 646
Target Start/End: Original strand, 26311853 - 26312144
Alignment:
Q  338 ggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttga--atttt 435  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||   | ||| ||||| |||||||   ||||    
T  26311853 ggcctctaacgaaaaattaaatctaatacctacccccaacttaaataaaaaatatatatgttatatc-tttatatcctttagtactcgtttgagtttttt 26311951  T
Q  436 ttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||                      |    
T  26311952 ttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatc----------------------a 26312029  T
Q  536 ttgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta-cccttttccacaagag---aggagtgacaaatccaaacgacaccatta 631  Q
    |||||||||||||||||||||       ||||  ||||||||||||||||| ||||||||||||| ||   ||||||||||||||||||||||||| |||    
T  26312030 ttgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccccttttccacaacagatcaggagtgacaaatccaaacgacaccgtta 26312129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 354 - 646
Target Start/End: Original strand, 27351212 - 27351504
Alignment:
Q  354 ttaaatctaatacccaccctccacttaaataaaa-aatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttct 452  Q
    |||| |||||||| ||||| | |||| ||||||| || ||||||||||  || |||||||||||||||| ||||||||  ||||||||||||||||||||    
T  27351212 ttaagtctaatactcaccccctacttgaataaaataaaatatatgttacttccttttctttcttcagtatacgtttgagatttttctagactctagttct 27351311  T
Q  453 cctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaaca 552  Q
    ||||| || |||||||| || | |||||||| |||| | ||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||   |    
T  27351312 cctttctgaacataaatttggtgctatcaaaccacctccaatttgtataaccacttaatcagtcaatttggaaagttatttcattgaaagaataacctaa 27351411  T
Q  553 atcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||        ||  ||||||||| || ||||   |||| ||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||    
T  27351412 atcatttcttt-tttgcataaaccagtcattttcttctttcccacaacggaggagtgacaaatctaaacgacactattaggtaaatttcacctc 27351504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 349 - 623
Target Start/End: Complemental strand, 17514138 - 17513868
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||   | |  | | |  | ||||  |||||||||||  |||||||||||| |||    
T  17514138 aaaaattaaatctaatacccaccc-ccacttaaataaaaaatatatataaaaaaaaaatgt--tacttctttacacgtttgaggtttttctagactttag 17514042  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| | || | ||||||||| | ||| |||| |||||| ||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  17514041 ttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcactgaaagaatcac 17513942  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacga 623  Q
    ||||||||        ||||||||||||||||||||| |||||| ||||||  ||  ||||||||||||||||||    
T  17513941 aacaatcatttcttt-ttcacataaaccattcgtttttccctttcccacaacggataagtgacaaatccaaacga 17513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 287 - 597
Target Start/End: Complemental strand, 42292131 - 42291839
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||| | || |||||||  |  ||||||||| |||||||| ||| | |||||||||||||    
T  42292131 gccttgagggagtgcaaggtgctcaattag-ccgggcctccaaaagctataggcctcaga--aaaaattaactctaatactcacgc-ccacttaaataaa 42292036  T
Q  387 aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatca 486  Q
    ||||||||||||||             ||||  ||||||||||| ||||||||| ||| |||||||||| | || |||||||| || | |||||||||||    
T  42292035 aaatatatatgtta-------------cttctttacacgtttgacttttttctaaactttagttctcctatctggacataaatttggtactatcaaatca 42291949  T
Q  487 cccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgtttta 586  Q
    || | ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||        |||||||||||||||||||||     
T  42291948 ccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttcttt-ttcacataaaccattcgttttc 42291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 289 - 632
Target Start/End: Original strand, 29156004 - 29156331
Alignment:
Q  289 cttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 388  Q
    |||||||| ||||||| |||||||  | |||||||||||||| ||||  | ||||  |  ||||||||||||||||||||||| || | |||||||||||    
T  29156004 cttgagggagtgcaagatgctcaatcaaaccggacctccaaaagttatggacctcaga--aaaaattaaatctaatacccacc-tctatttaaataaaaa 29156100  T
Q  389 a-tatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 487  Q
    | |||||||||||             ||||  ||||||||||| ||||||||||||| ||||| |||| | || ||||||||||| | |||||||| |||    
T  29156101 aatatatatgtta-------------cttctttacacgtttgagttttttctagactatagttatcctatctgaacataaatctggtactatcaaaccac 29156187  T
Q  488 ccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttac 587  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||        |||| |||||||||||||||| |    
T  29156188 ccctaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatttcttt-ttcatataaaccattcgttttcc 29156286  T
Q  588 ccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||| ||||||  ||  |||||||||| ||||||| ||| ||||    
T  29156287 cctttcccacaacggataagtgacaaattcaaacgataccgttag 29156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 389 - 646
Target Start/End: Original strand, 40956217 - 40956468
Alignment:
Q  389 atatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacc 488  Q
    ||||||||||||  || |||||||||||||     ||||||| |||||||||||||||||||||||||| || ||||||||||||| | ||||||    |    
T  40956217 atatatatgttacttctttttctttcttca-----cgtttgagttttttctagactctagttctcctttgtggacataaatctgatgcaatcaaacattc 40956311  T
Q  489 cctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacc 588  Q
     | ||| |||||||||||||||||| | |||||| ||| |||||||||| ||||||||||||||||||        ||  |||| |||||||||||| ||    
T  40956312 tccaatttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaatcacaacaatcatttcttttttg-catacaccattcgttttccc 40956410  T
Q  589 cttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| ||||||  || |||||||||||||||||||| || ||||||||||||||||||    
T  40956411 ctttcccacaatggaagagtgacaaatccaaacgacgccgttagataaatttcacctc 40956468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 420 - 556
Target Start/End: Complemental strand, 10591407 - 10591271
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| ||||||||||||| |||||||||| | || |||||||| || | |||||||| |||||| ||| |||||||||||||||||||| |||    
T  10591407 tacacgtttgagttttttctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaat 10591308  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatca 556  Q
    ||| |||| ||||||||||||||||||||||||||||    
T  10591307 ttgaaaagttatttcattgaaagaatcacaacaatca 10591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 349 - 632
Target Start/End: Complemental strand, 4734772 - 4734505
Alignment:
Q  349 aaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctag 448  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||             ||||  |||| |||||| ||||||||||||| |||    
T  4734772 aaaaattaactctaatacccaccc--cacttaaataaaaaatatatatgtta-------------cttctttacatgtttgagttttttctagactttag 4734688  T
Q  449 ttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcac 548  Q
    ||||||| | || ||||||||||| | |||||||| |||| | ||| ||||||||| ||| |||| |||||||| ||| |||||||||||||||||||||    
T  4734687 ttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctatttcattgaaagaatcac 4734588  T
Q  549 aacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    ||||||||        ||||||||||||||||||||| || ||| |||||   ||  ||||||||||||||| |||||| ||||    
T  4734587 aacaatcatttcttt-ttcacataaaccattcgttttcccatttcccacagcggataagtgacaaatccaaatgacaccgttag 4734505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 138066 - 138208
Alignment:
Q  412 ttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaat 511  Q
    |||||| | |||||| ||| ||||||||||||||||||||| ||||| | |||||||| |||| |||||||| ||||   ||| ||||||||||||||||    
T  138066 ttcttctggacacgtatgagttttttctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaat 138165  T
Q  512 cagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  138166 cagtcaatttgaaaagctatttcattgaaataatcacaacaat 138208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 420 - 626
Target Start/End: Original strand, 5829315 - 5829518
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| |||||| |||||| |||||||||| | |  ||||||||||| | |||||||| || ||  ||| ||||||||||||||||||||||||    
T  5829315 tacacgtttgagttttttatagactttagttctcctatcttgacataaatctggtactatcaaaccaacctcaatttgtataatcacttaatcagtcaat 5829414  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||  |||||||||||||| ||||||||||||||||||        ||||||||||||||||||||| |||||| | ||||  ||   |||||||||||||    
T  5829415 tt--aaagctatttcattaaaagaatcacaacaatcatttcttt-ttcacataaaccattcgtttttccctttcctacaacggataggtgacaaatccaa 5829511  T
Q  620 acgacac 626  Q
    |||||||    
T  5829512 acgacac 5829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 348 - 632
Target Start/End: Original strand, 20975855 - 20976126
Alignment:
Q  348 gaaaaattaaatctaatacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaatttttt--ctagactc 445  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||             ||||  ||||||||||| ||||||  |||||||     
T  20975855 gaaaaattaactctaatacccacc-tccacttaaataaaaaatatatatgtta-------------cttctttacacgtttgagttttttttctagactt 20975940  T
Q  446 tagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat 545  Q
    |||||||| | | |  |||||||| || | |||||||| |||| | ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  20975941 tagttctcttatcttgacataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaat 20976040  T
Q  546 cacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattag 632  Q
    |||||||||||        ||||||||||| |||||||||   |||| ||||||  ||  ||||||||||||||| |||||| ||||    
T  20976041 cacaacaatcatttcttt-ttcacataaactattcgttttcgtctttcccacaacggataagtgacaaatccaaatgacaccgttag 20976126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 384 - 537
Target Start/End: Complemental strand, 8379691 - 8379538
Alignment:
Q  384 aaaaaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaa 483  Q
    |||||| | ||||||||| || |||||||||||| |||||| ||||| |||||||||||||||  ||||| ||| || |||||||| ||||  |||||||    
T  8379691 aaaaaaaaaatatgttatttctttttctttcttcggtacacatttgagttttttctagactctcattctcatttatggacataaatatgatgttatcaaa 8379592  T
Q  484 tcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcatt 537  Q
    ||||||||||| |||||||| ||||||||| | ||||| ||||| |||||||||    
T  8379591 tcacccctaatttgtataattacttaatcaattaatttcgaaagttatttcatt 8379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 425 - 646
Target Start/End: Original strand, 40779127 - 40779345
Alignment:
Q  425 gtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttgga 524  Q
    |||||| ||||||||||| |||||||||||||| || |||||||| ||||  |||||||  | ||| ||| |||||||||  ||||| |||||||||| |    
T  40779127 gtttgagttttttctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaa 40779226  T
Q  525 aagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgac 624  Q
    || ||||| ||||| | |||||||||||||||        |||  ||||||||||||||||  ||||| ||||||  ||||||||||||||| |||||||    
T  40779227 aaactattccattg-aggaatcacaacaatcatttcttttttcgtataaaccattcgtttt--cctttcccacaatggaggagtgacaaatcgaaacgac 40779323  T
Q  625 accattagataaatttcacctc 646  Q
    | |||||| |||||||||||||    
T  40779324 atcattaggtaaatttcacctc 40779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 374 - 547
Target Start/End: Original strand, 23069102 - 23069277
Alignment:
Q  374 ccacttaaataaa--aaatatatatgttatatcattttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatct 471  Q
    |||||||||||||  ||| ||||||||||  || ||||||||||||  ||||||||||  |||||| || |||||| ||||||||| || |||||||| |    
T  23069102 ccacttaaataaataaaagatatatgttacttctttttctttcttcgttacacgtttgtgttttttttatactctaattctcctttctgaacataaatat 23069201  T
Q  472 gatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatca 547  Q
    ||| ||| |||| |||||| ||| ||||||||| |||||||| || ||||||||||||||||||||  ||||||||    
T  23069202 gatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatttcattacaagaatca 23069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 420 - 620
Target Start/End: Complemental strand, 3349862 - 3349664
Alignment:
Q  420 tacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaat 519  Q
    ||||||||||| ||||||||||||| |||||||||| | || |||||||| || | | |||||| |||  | |||  | ||||| |||||||||||||||    
T  3349862 tacacgtttgagttttttctagactttagttctcctatctggacataaatttggtac-atcaaaccactaccaattggaataatgacttaatcagtcaat 3349764  T
Q  520 ttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaa 619  Q
    ||| ||||||||||||| |||||||||||||||||||        |||||||||||| |||||||| |||||| ||||||  ||  ||||||||||||||    
T  3349763 ttgaaaagctatttcatagaaagaatcacaacaatcatttcttt-ttcacataaaccgttcgttttcccctttcccacaacggataagtgacaaatccaa 3349665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 436 - 630
Target Start/End: Original strand, 931326 - 931514
Alignment:
Q  436 ttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttca 535  Q
    ||||||||| |||||||| ||| | || |||||| |||| |||| ||||||| || ||| |||||||||||||||||||||||||| ||||||||||       
T  931326 ttctagactatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagctatt--- 931422  T
Q  536 ttgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccatt 630  Q
      ||||||||||||| |||||        ||| |||||||||||||||||  ||||| |||||| ||| ||||||  | ||||||||||| ||||    
T  931423 --gaaagaatcacaataatcatttcttt-ttcgcataaaccattcgttttctcctttcccacaacagacgagtgaagagtccaaacgacaacatt 931514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 433 - 550
Target Start/End: Original strand, 10033489 - 10033607
Alignment:
Q  433 tttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaat-cagtcaatttggaaagctat 531  Q
    |||||||||||||||||||| |||| ||||||||||| |||| |||||||| | ||   ||| |||||||||||| | |  |||||||||| ||||||||    
T  10033489 tttttctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctat 10033588  T
Q  532 ttcattgaaagaatcacaa 550  Q
    || ||||||||||||||||    
T  10033589 tttattgaaagaatcacaa 10033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 18873458 - 18873521
Alignment:
Q  491 taatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  18873458 taatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaat 18873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 423 - 645
Target Start/End: Original strand, 17325777 - 17325998
Alignment:
Q  423 acgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttg 522  Q
    |||| ||| |||||| |||||||||||||  |||| || |||||||| |||| |||| |||  |||    || || ||||||||||||||||||||||||    
T  17325777 acgtatgagttttttttagactctagttccactttctggacataaatttgatgctattaaactaccatcgatttgaataatcacttaatcagtcaatttg 17325876  T
Q  523 gaaag-ctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaac 621  Q
     |||  ||||||||||||||||||||||||||| |        ||| ||||||||||||| ||| |||||| | || |   ||||||||| | |||||||    
T  17325877 aaaaaactatttcattgaaagaatcacaacaattatttcttt-ttcgcataaaccattcgctttcccctttcctacgacgtaggagtgac-attccaaac 17325974  T
Q  622 gacaccattagataaatttcacct 645  Q
    |||||| |||| ||||||||||||    
T  17325975 gacaccgttaggtaaatttcacct 17325998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 13474875 - 13474944
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| || ||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  13474875 ttacgttttattttactagaggcctattttaaaaagagagtcgagcctcctatttcacggggacggccct 13474944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 16515440 - 16515588
Alignment:
Q  406 ttttctttcttcagtacacgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatca 505  Q
    |||| |||||||||||||||| |||  ||||| || ||| ||||||| |||| |  |||||||| |||| |||| ||| ||||   ||| |  |||||||    
T  16515440 ttttttttcttcagtacacgtatgagctttttttaaactttagttctactttctagacataaatttgatgctattaaaacaccatcaattttaataatca 16515539  T
Q  506 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 554  Q
    |||||||| |||||||| |||  ||||| ||||||||||||||||||||    
T  16515540 cttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaat 16515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 496 - 646
Target Start/End: Complemental strand, 7390458 - 7390311
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc 595  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||||||| ||||| |        ||| ||||||||||||||||| |||||| |     
T  7390458 tgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttcttt-ttcgcataaaccattcgttttcccctttcct 7390360  T
Q  596 acaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
     | | | || ||||||  || ||||||||||| ||||||||||||||||||    
T  7390359 gcgacatagaagtgac--attcaaacgacaccgttagataaatttcacctc 7390311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 584 - 646
Target Start/End: Original strand, 37046875 - 37046937
Alignment:
Q  584 ttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||| ||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  37046875 ttaccattttctacaatcgaggagtgacaaatccaaacgacaccgttagataaatttcacctc 37046937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 646
Target Start/End: Original strand, 33281680 - 33281829
Alignment:
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc 595  Q
    |||||||||||||||| |||||||||  |||| |||||||||||||||||| ||| |||||        ||| ||||||||||| | ||| || ||| ||    
T  33281680 tgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcatttcttt-ttcgcataaaccatttgcttttccttttccc 33281778  T
Q  596 acaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||  || ||||||||||| ||||||||| | |||  |||||||||||||    
T  33281779 acaacggatgagtgacaaattcaaacgacatcgttaagtaaatttcacctc 33281829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 36718448 - 36718379
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||| || | |||||||||    
T  36718448 ttacgttttattttactatggatctattttaaaaagagagttgagcctcctattttacagagacggccct 36718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 37047027 - 37047096
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||| ||  || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  37047027 ttacgttttattttactaagggcctattttaaaaagagagccgaacctcctatttcacggggacggccct 37047096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 734 - 801
Target Start/End: Original strand, 12661552 - 12661619
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 801  Q
    ||||||||||||||| || ||  |||||||||||||||||| |||||||| ||||||| |||||||||    
T  12661552 ttacgttttattttactaaagacctattttaaaaagagagccgagcctcccatttcacagggacggcc 12661619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 803
Target Start/End: Original strand, 13424132 - 13424178
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||    
T  13424132 ctattttaaaaagagagccgagcctcctatttcacagggacggccct 13424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 802
Target Start/End: Original strand, 26312231 - 26312299
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccc 802  Q
    ||||||||||||||| |||  | ||||||||||| |||||  |||||||||||||||| ||||||||||    
T  26312231 ttacgttttattttactattagcctattttaaaatgagagtcgagcctcctatttcacggggacggccc 26312299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 790
Target Start/End: Original strand, 931618 - 931669
Alignment:
Q  739 ttttattttattataggtctattttaaaaagagagctgagcctcctatttca 790  Q
    |||| ||||| || |||||||||||||||||||||| || ||||||||||||    
T  931618 ttttgttttactagaggtctattttaaaaagagagccgaacctcctatttca 931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 755 - 801
Target Start/End: Complemental strand, 10591074 - 10591028
Alignment:
Q  755 gtctattttaaaaagagagctgagcctcctatttcactgggacggcc 801  Q
    |||||||||||| ||||||| |||||||||||||||  |||||||||    
T  10591074 gtctattttaaatagagagccgagcctcctatttcatagggacggcc 10591028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 40778695 - 40778785
Alignment:
Q  339 gcctctaacgaaaaattaaatctaatacccaccctccacttaaataaaa-aatatatatgttatatcattttctttcttcagtacacgttt 428  Q
    ||||| ||| ||| ||||| |||||||| ||||| | |||||||||||| || ||||||||||  || ||||||||||| ||| |||||||    
T  40778695 gcctcaaacaaaatattaagtctaatactcaccccctacttaaataaaataaaatatatgttacttccttttctttcttgagtgcacgttt 40778785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 646
Target Start/End: Complemental strand, 8379428 - 8379352
Alignment:
Q  569 cataaaccattcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||| ||||||||||| |||||  ||||||  || ||||||||||||||||||||||| ||   |||||||||||||    
T  8379428 cataatccattcgttttccccttc-ccacaacggatgagtgacaaatccaaacgacaccgttgcgtaaatttcacctc 8379352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 791
Target Start/End: Original strand, 13656456 - 13656512
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||| ||| |  |||||||||||||||||| || |||||||||||||    
T  13656456 ttacgttttattttactat-gacctattttaaaaagagagccgaacctcctatttcac 13656512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 602 - 643
Target Start/End: Original strand, 23069335 - 23069376
Alignment:
Q  602 gaggagtgacaaatccaaacgacaccattagataaatttcac 643  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    
T  23069335 gaggagtgacaaattcaaacgacaccgttaggtaaatttcac 23069376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 790
Target Start/End: Original strand, 41612990 - 41613023
Alignment:
Q  757 ctattttaaaaagagagctgagcctcctatttca 790  Q
    |||||||||||||||||| |||||||||||||||    
T  41612990 ctattttaaaaagagagcagagcctcctatttca 41613023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 156; Significance: 2e-82; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 298 - 645
Target Start/End: Complemental strand, 46429 - 46084
Alignment:
Q  298 gtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaa-ttaaatctaatacccaccctccacttaaataaaaaatatatat 396  Q
    |||||||||||||||| || |||||||| ||||||  |  |||||| ||| ||||| |||| |||||||||||| | | |||||||||||||| | | ||    
T  46429 gtgcaaggtgctcaaccaggccggaccttcaaatgccatgggcctcaaacaaaaaaattaagtctaatacccacacac-acttaaataaaaaaaaaa-at 46332  T
Q  397 gttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaata 495  Q
    ||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||| ||||| ||||     
T  46331 gttatatcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataatt 46232  T
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc 595  Q
    || |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||       |||||||||||||||||||||||| ||||| |    
T  46231 tggataatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatca-ttttttcttcacataaaccattcgttttactctttttc 46133  T
Q  596 acaagagaggagtgacaaatccaaacgacaccattagataaatttcacct 645  Q
    |||| ||||||||||||||||||||||||||| || | ||||||||||||    
T  46132 acaa-agaggagtgacaaatccaaacgacaccgttggctaaatttcacct 46084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 153; Significance: 1e-80; HSPs: 3)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 380 - 646
Target Start/End: Complemental strand, 17307 - 17040
Alignment:
Q  380 aaataaaaaatatatatgttatatcattttctttcttcagtacacgtttgaat--tttttctagactctagttctcctttttgtacataaatctgatcct 477  Q
    ||||||||||||||||||||||| | || | |  ||| |||||||||||||||  ||||||||||||||||||||| |||||||| ||||||| ||||||    
T  17307 aaataaaaaatatatatgttataactttatatc-ctttagtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcct 17209  T
Q  478 atcaaatcacccctaatatgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaacca 577  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       |||| |||||||||    
T  17208 atcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaatcacaacaatcattttcttcttcgcataaacca 17109  T
Q  578 ttcgttttacccttttccacaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    ||||||||||| |||||||||| | || |||||||||| ||||||||||| || |||||||||||||||    
T  17108 ttcgttttaccattttccacaacaaagaagtgacaaattcaaacgacaccgttggataaatttcacctc 17040  T

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Target: scaffold0181; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 18229 - 18128
Alignment:
Q  287 gccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccacttaaataaa 386  Q
    |||||||||||||| |||||| ||||  || |||| |||||||||||||  ||||| ||||||||||||||||||||||| ||||| ||| |||||||||    
T  18229 gccttgagggtgtgaaaggtgttcaatcaggccgggcctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccccatttaaataaa 18130  T
Q  387 aa 388  Q
    ||    
T  18129 aa 18128  T

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Target: scaffold0181; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 791
Target Start/End: Complemental strand, 16953 - 16896
Alignment:
Q  734 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 791  Q
    ||||||||||||||||||  || |||||||||||||||||| ||||||||||||||||    
T  16953 ttacgttttattttattaggggcctattttaaaaagagagccgagcctcctatttcac 16896  T

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Target: scaffold0564 (Bit Score: 125; Significance: 7e-64; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 397 - 646
Target Start/End: Original strand, 979 - 1217
Alignment:
Q  397 gttatatcattttctttcttcagtacacgtttgaatttttt-ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaata 495  Q
    |||||||| |||| |||||| | |||| |||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||     
T  979 gttatatccttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatt 1078  T
Q  496 tgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttcc 595  Q
    ||||||||||            |||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  1079 tgtataatca------------atttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttcc 1166  T
Q  596 acaagagaggagtgacaaatccaaacgacaccattagataaatttcacctc 646  Q
    |||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  1167 acaacataggagtgacaaatccaaacgacaccgttagataaatttcacctc 1217  T

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Target: scaffold0564; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 758 - 803
Target Start/End: Original strand, 1330 - 1375
Alignment:
Q  758 tattttaaaaagagagctgagcctcctatttcactgggacggccct 803  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  1330 tattttaaaaagagagccgagcctcctatttcacggggacggccct 1375  T

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Target: scaffold0035 (Bit Score: 121; Significance: 2e-61; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 281 - 470
Target Start/End: Complemental strand, 23038 - 22847
Alignment:
Q  281 ggccctgccttgagggtgtgcaaggtgctcaactagaccggacctccaaatgttacaggcctctaacgaaaaattaaatctaatacccaccctccactta 380  Q
    |||| |||||| |||||||| |||||||||||| || ||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||    
T  23038 ggccttgccttcagggtgtgtaaggtgctcaaccaggccggacctccaaatgatacgggtctctaacgaaaaattaaatctaatatccaccctccactta 22939  T
Q  381 aataaaaaatatatatgttatatcattttctttcttcagtacacgtttga--attttttctagactctagttctcctttttgtacataaatc 470  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||   |||||| ||||||||| ||||||||||||||||||||||    
T  22938 aataaaaaatatatatgttatatccttttatttctttagtacacgtttgagttttttttgtagactctaattctcctttttgtacataaatc 22847  T

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Target: scaffold0035; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 515 - 646
Target Start/End: Complemental strand, 22844 - 22713
Alignment:
Q  515 tcaatttggaaagctatttcattgaaagaatcacaacaatcannnnnnncttcacataaaccattcgttttacccttttccacaagagaggagtgacaaa 614  Q
    ||||| || ||| ||||||||||||||||||||||| ||| |       |||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  22844 tcaatatgaaaaactatttcattgaaagaatcacaataattatttttttcttcgcataaaccattcgttttacccttttccacaacataggagtgacaaa 22745  T
Q  615 tccaaacgacaccattagataaatttcacctc 646  Q
    | ||||||||||| ||||||||||||||||||    
T  22744 ttcaaacgacaccgttagataaatttcacctc 22713  T

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Target: scaffold0606 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 424 - 550
Target Start/End: Complemental strand, 8525 - 8399
Alignment:
Q  424 cgtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatatgtataatcacttaatcagtcaatttgg 523  Q
    ||||||| ||| | ||||||||||| | |||||| || ||||||| || || |||||||| ||||| |||| |||||||||| ||||||||||||||| |    
T  8525 cgtttgagtttctactagactctagatttcctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatcagtcaatttcg 8426  T
Q  524 aaagctatttcattgaaagaatcacaa 550  Q
    ||| |||||||||||||||||||||||    
T  8425 aaaactatttcattgaaagaatcacaa 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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