View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19335_low_3 (Length: 346)

Name: NF19335_low_3
Description: NF19335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19335_low_3
NF19335_low_3
[»] chr7 (36 HSPs)
chr7 (112-328)||(42901878-42902085)
chr7 (1-83)||(7240744-7240826)
chr7 (1-82)||(1738500-1738581)
chr7 (1-80)||(1565782-1565861)
chr7 (1-80)||(46840858-46840937)
chr7 (1-83)||(9268751-9268833)
chr7 (1-83)||(31319452-31319534)
chr7 (1-79)||(38063966-38064044)
chr7 (1-78)||(23314192-23314269)
chr7 (1-79)||(7482224-7482302)
chr7 (1-83)||(22285694-22285776)
chr7 (1-79)||(28536804-28536882)
chr7 (1-78)||(36583395-36583472)
chr7 (1-84)||(38441454-38441537)
chr7 (1-78)||(94371-94448)
chr7 (1-78)||(36016249-36016326)
chr7 (1-79)||(4790247-4790325)
chr7 (1-62)||(33418392-33418453)
chr7 (1-80)||(9575407-9575486)
chr7 (4-72)||(40840175-40840243)
chr7 (32-82)||(7240833-7240883)
chr7 (32-82)||(7482309-7482359)
chr7 (32-81)||(1738444-1738493)
chr7 (1-78)||(7269458-7269535)
chr7 (32-84)||(38441544-38441596)
chr7 (32-79)||(9268840-9268887)
chr7 (24-79)||(28469480-28469535)
chr7 (32-78)||(22285783-22285829)
chr7 (32-78)||(23314139-23314185)
chr7 (32-66)||(36033238-36033272)
chr7 (32-86)||(38063905-38063959)
chr7 (77-115)||(42902135-42902173)
chr7 (32-78)||(46840944-46840990)
chr7 (32-81)||(36583479-36583528)
chr7 (34-66)||(958518-958550)
chr7 (32-72)||(33418460-33418500)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-85)||(23778-23862)
scaffold0204 (32-82)||(23869-23919)
[»] chr4 (50 HSPs)
chr4 (1-85)||(48336256-48336340)
chr4 (1-82)||(47833607-47833688)
chr4 (1-81)||(3372118-3372198)
chr4 (1-78)||(20538739-20538816)
chr4 (1-78)||(24704370-24704447)
chr4 (1-78)||(53337370-53337447)
chr4 (1-81)||(3992973-3993053)
chr4 (1-81)||(42797729-42797809)
chr4 (1-79)||(26231576-26231654)
chr4 (1-79)||(33551200-33551278)
chr4 (1-78)||(6121946-6122023)
chr4 (1-78)||(46797725-46797802)
chr4 (4-79)||(3904739-3904814)
chr4 (1-80)||(43900547-43900626)
chr4 (1-84)||(51894635-51894718)
chr4 (1-79)||(7579309-7579387)
chr4 (1-79)||(47838670-47838748)
chr4 (1-78)||(52756675-52756752)
chr4 (1-63)||(33621811-33621873)
chr4 (5-79)||(40913246-40913320)
chr4 (4-84)||(5986870-5986950)
chr4 (1-80)||(41469819-41469898)
chr4 (1-63)||(3422076-3422137)
chr4 (4-63)||(41615732-41615791)
chr4 (6-79)||(25855082-25855155)
chr4 (4-60)||(29845663-29845719)
chr4 (24-78)||(4780371-4780425)
chr4 (32-79)||(3993060-3993107)
chr4 (6-72)||(17236845-17236912)
chr4 (1-64)||(50430471-50430534)
chr4 (32-82)||(3422144-3422194)
chr4 (32-78)||(42797816-42797862)
chr4 (32-82)||(47838613-47838663)
chr4 (22-87)||(5986950-5987015)
chr4 (32-81)||(41469763-41469812)
chr4 (148-212)||(24520992-24521056)
chr4 (24-79)||(24704446-24704501)
chr4 (32-78)||(1716301-1716347)
chr4 (32-78)||(6121893-6121939)
chr4 (32-78)||(46797809-46797855)
chr4 (32-78)||(47833695-47833741)
chr4 (32-82)||(48336347-48336397)
chr4 (32-78)||(51894582-51894628)
chr4 (34-79)||(3904682-3904727)
chr4 (7-72)||(17344219-17344284)
chr4 (1-66)||(31013033-31013098)
chr4 (32-81)||(33621880-33621929)
chr4 (32-73)||(40913194-40913235)
chr4 (32-80)||(17344297-17344345)
chr4 (34-78)||(20538686-20538730)
[»] chr3 (49 HSPs)
chr3 (1-85)||(22721924-22722008)
chr3 (1-82)||(4238590-4238671)
chr3 (1-78)||(51406673-51406750)
chr3 (1-80)||(44785449-44785528)
chr3 (1-79)||(19557105-19557183)
chr3 (1-79)||(49823434-49823512)
chr3 (1-82)||(2787885-2787966)
chr3 (1-78)||(10297979-10298056)
chr3 (1-82)||(38964388-38964469)
chr3 (1-81)||(8437422-8437502)
chr3 (1-81)||(21295379-21295459)
chr3 (1-81)||(34080083-34080163)
chr3 (1-81)||(42170399-42170479)
chr3 (1-80)||(8817439-8817518)
chr3 (1-83)||(48340392-48340474)
chr3 (1-78)||(17653712-17653789)
chr3 (1-78)||(37508921-37508998)
chr3 (1-81)||(40691049-40691129)
chr3 (1-81)||(42507408-42507488)
chr3 (1-80)||(9111547-9111626)
chr3 (1-79)||(36095733-36095811)
chr3 (1-79)||(46208029-46208107)
chr3 (1-78)||(35513473-35513550)
chr3 (1-62)||(6013389-6013450)
chr3 (1-63)||(33942985-33943047)
chr3 (32-80)||(17653796-17653844)
chr3 (32-79)||(4238678-4238725)
chr3 (32-79)||(37509005-37509052)
chr3 (32-79)||(46208114-46208161)
chr3 (6-68)||(8951954-8952016)
chr3 (32-78)||(21295326-21295372)
chr3 (28-66)||(29285838-29285876)
chr3 (23-60)||(33128224-33128261)
chr3 (32-85)||(40690989-40691042)
chr3 (32-80)||(10298063-10298111)
chr3 (20-87)||(9213588-9213655)
chr3 (25-68)||(26001141-26001184)
chr3 (32-79)||(49823380-49823427)
chr3 (32-78)||(6013336-6013382)
chr3 (32-82)||(8817382-8817432)
chr3 (32-78)||(19557052-19557098)
chr3 (32-78)||(34080030-34080076)
chr3 (32-78)||(38964476-38964522)
chr3 (32-78)||(48340481-48340527)
chr3 (32-73)||(9111499-9111540)
chr3 (32-73)||(42507360-42507401)
chr3 (6-63)||(43323075-43323132)
chr3 (34-79)||(51406759-51406804)
chr3 (32-80)||(9027140-9027188)
[»] chr8 (46 HSPs)
chr8 (1-79)||(12763707-12763785)
chr8 (1-82)||(54665-54746)
chr8 (1-86)||(6552647-6552732)
chr8 (1-81)||(2890215-2890295)
chr8 (1-80)||(7785831-7785910)
chr8 (1-80)||(7805752-7805831)
chr8 (1-79)||(43199407-43199485)
chr8 (1-78)||(3304331-3304408)
chr8 (1-78)||(12343193-12343270)
chr8 (1-78)||(32114528-32114605)
chr8 (1-78)||(44498240-44498317)
chr8 (1-79)||(25601053-25601131)
chr8 (1-79)||(32211416-32211494)
chr8 (1-78)||(15888405-15888482)
chr8 (1-78)||(31654613-31654690)
chr8 (1-78)||(39571256-39571333)
chr8 (1-81)||(33289314-33289394)
chr8 (1-78)||(7012171-7012248)
chr8 (16-80)||(4245649-4245713)
chr8 (1-79)||(13578856-13578934)
chr8 (1-75)||(28463614-28463688)
chr8 (1-78)||(8587170-8587247)
chr8 (24-82)||(27422266-27422324)
chr8 (24-79)||(25600999-25601054)
chr8 (32-81)||(7785775-7785824)
chr8 (34-86)||(33057680-33057732)
chr8 (32-80)||(39571201-39571249)
chr8 (32-79)||(54611-54658)
chr8 (32-79)||(2890161-2890208)
chr8 (32-79)||(43199353-43199400)
chr8 (32-83)||(44498182-44498233)
chr8 (32-78)||(6552739-6552785)
chr8 (21-63)||(13246809-13246851)
chr8 (7-73)||(17006916-17006982)
chr8 (7-73)||(17570265-17570331)
chr8 (10-80)||(24692040-24692110)
chr8 (34-80)||(32211361-32211407)
chr8 (32-78)||(33289261-33289307)
chr8 (45-82)||(6899415-6899452)
chr8 (32-81)||(7805696-7805745)
chr8 (4-69)||(28999104-28999169)
chr8 (32-84)||(3304272-3304324)
chr8 (32-80)||(7012255-7012303)
chr8 (32-72)||(12343146-12343186)
chr8 (32-80)||(12763652-12763700)
chr8 (53-89)||(35011200-35011236)
[»] chr5 (33 HSPs)
chr5 (1-82)||(37149008-37149089)
chr5 (1-82)||(582985-583066)
chr5 (1-78)||(9395350-9395427)
chr5 (1-81)||(20848071-20848151)
chr5 (1-80)||(36563591-36563670)
chr5 (1-79)||(23359941-23360019)
chr5 (1-79)||(41989460-41989538)
chr5 (1-78)||(11795168-11795245)
chr5 (1-84)||(26350403-26350486)
chr5 (1-79)||(13033050-13033128)
chr5 (1-79)||(13103023-13103101)
chr5 (1-80)||(17025622-17025701)
chr5 (1-82)||(37641949-37642031)
chr5 (1-80)||(4443958-4444037)
chr5 (1-79)||(38361744-38361822)
chr5 (1-54)||(21575970-21576023)
chr5 (1-57)||(6126845-6126901)
chr5 (1-71)||(13539920-13539986)
chr5 (24-79)||(2629620-2629675)
chr5 (32-82)||(9395434-9395484)
chr5 (32-82)||(13103108-13103158)
chr5 (32-78)||(23360026-23360072)
chr5 (32-73)||(4444044-4444085)
chr5 (34-70)||(36595782-36595818)
chr5 (32-80)||(41989405-41989453)
chr5 (32-79)||(17025708-17025755)
chr5 (32-79)||(36563537-36563584)
chr5 (32-78)||(6126908-6126954)
chr5 (34-72)||(11574166-11574204)
chr5 (32-82)||(13033135-13033185)
chr5 (24-73)||(966224-966273)
chr5 (32-84)||(11795252-11795304)
chr5 (53-81)||(26327531-26327559)
[»] chr1 (42 HSPs)
chr1 (1-82)||(27159411-27159492)
chr1 (1-82)||(44668146-44668227)
chr1 (1-81)||(26471118-26471198)
chr1 (1-84)||(47216752-47216835)
chr1 (1-79)||(9981646-9981724)
chr1 (1-83)||(39402019-39402101)
chr1 (1-78)||(31842848-31842925)
chr1 (1-81)||(47588390-47588470)
chr1 (1-80)||(11795931-11796010)
chr1 (1-80)||(14984835-14984914)
chr1 (1-79)||(34042695-34042773)
chr1 (1-78)||(1050888-1050965)
chr1 (1-78)||(23278054-23278131)
chr1 (1-78)||(44955259-44955336)
chr1 (4-81)||(12483684-12483761)
chr1 (1-78)||(47777534-47777611)
chr1 (1-82)||(25694315-25694396)
chr1 (1-72)||(47969700-47969772)
chr1 (1-79)||(17556751-17556830)
chr1 (6-79)||(11897053-11897126)
chr1 (4-79)||(12213530-12213605)
chr1 (1-79)||(16448161-16448239)
chr1 (32-80)||(11897138-11897186)
chr1 (6-66)||(11989793-11989853)
chr1 (22-81)||(12483625-12483684)
chr1 (24-79)||(37552217-37552272)
chr1 (32-81)||(14984921-14984970)
chr1 (1-78)||(37552141-37552218)
chr1 (32-85)||(39401959-39402012)
chr1 (32-72)||(44955212-44955252)
chr1 (32-79)||(17556837-17556884)
chr1 (32-79)||(25694403-25694450)
chr1 (32-82)||(9981731-9981781)
chr1 (32-78)||(11796017-11796063)
chr1 (32-78)||(27159358-27159404)
chr1 (32-78)||(31842795-31842841)
chr1 (32-78)||(44668093-44668139)
chr1 (32-78)||(47777481-47777527)
chr1 (22-71)||(40676796-40676845)
chr1 (32-81)||(47588334-47588383)
chr1 (32-80)||(1050972-1051020)
chr1 (32-80)||(34042780-34042828)
[»] chr6 (32 HSPs)
chr6 (1-81)||(8383022-8383102)
chr6 (1-80)||(33052847-33052926)
chr6 (1-79)||(2830334-2830412)
chr6 (1-79)||(11572198-11572276)
chr6 (1-78)||(6330115-6330192)
chr6 (1-82)||(13853646-13853727)
chr6 (1-78)||(26602323-26602400)
chr6 (1-79)||(8099529-8099607)
chr6 (1-79)||(35031054-35031132)
chr6 (1-82)||(8417846-8417927)
chr6 (1-83)||(6068561-6068643)
chr6 (1-79)||(6143553-6143631)
chr6 (1-78)||(9644696-9644773)
chr6 (1-78)||(9650713-9650790)
chr6 (1-78)||(13043758-13043835)
chr6 (1-62)||(28747187-28747248)
chr6 (22-79)||(3788111-3788168)
chr6 (5-70)||(6068997-6069062)
chr6 (1-48)||(17992018-17992065)
chr6 (21-59)||(6549902-6549940)
chr6 (1-78)||(22896471-22896539)
chr6 (32-81)||(26602407-26602456)
chr6 (32-80)||(8099614-8099662)
chr6 (32-80)||(9644780-9644828)
chr6 (32-80)||(9650797-9650845)
chr6 (32-79)||(6330199-6330246)
chr6 (32-83)||(8382964-8383015)
chr6 (32-79)||(11572144-11572191)
chr6 (32-79)||(13853592-13853639)
chr6 (32-78)||(2830419-2830465)
chr6 (34-79)||(35031000-35031045)
chr6 (1-73)||(14936510-14936582)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-80)||(12858-12937)
scaffold0482 (32-81)||(12944-12993)
[»] chr2 (43 HSPs)
chr2 (1-80)||(37990066-37990145)
chr2 (1-80)||(41478692-41478771)
chr2 (1-79)||(3055557-3055635)
chr2 (1-79)||(4683985-4684063)
chr2 (1-79)||(15896841-15896919)
chr2 (1-79)||(44397546-44397624)
chr2 (1-79)||(44398685-44398763)
chr2 (1-78)||(13197763-13197840)
chr2 (1-78)||(16044370-16044447)
chr2 (1-78)||(37666663-37666740)
chr2 (1-80)||(13344482-13344561)
chr2 (1-79)||(9047808-9047886)
chr2 (1-87)||(15372217-15372303)
chr2 (1-79)||(16243836-16243914)
chr2 (1-79)||(38917575-38917653)
chr2 (1-78)||(6648572-6648649)
chr2 (1-78)||(12337990-12338067)
chr2 (1-76)||(30099235-30099310)
chr2 (1-63)||(41492949-41493011)
chr2 (4-78)||(12170455-12170529)
chr2 (1-50)||(44804631-44804680)
chr2 (1-72)||(31150659-31150730)
chr2 (32-81)||(41492893-41492942)
chr2 (6-70)||(16734791-16734855)
chr2 (32-82)||(6648515-6648565)
chr2 (32-81)||(9047752-9047801)
chr2 (32-85)||(37990006-37990059)
chr2 (6-47)||(41453090-41453131)
chr2 (32-81)||(41478636-41478685)
chr2 (32-80)||(3055642-3055690)
chr2 (7-63)||(4553069-4553125)
chr2 (22-82)||(12170395-12170455)
chr2 (32-79)||(38917521-38917568)
chr2 (32-79)||(44398770-44398817)
chr2 (32-78)||(12337937-12337983)
chr2 (32-78)||(13197710-13197756)
chr2 (20-78)||(13724102-13724160)
chr2 (32-78)||(15372310-15372356)
chr2 (32-78)||(15896926-15896972)
chr2 (32-82)||(16243779-16243829)
chr2 (20-82)||(23227344-23227406)
chr2 (32-81)||(37666607-37666656)
chr2 (20-69)||(45294395-45294444)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-80)||(49503-49579)
scaffold0009 (22-78)||(49579-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-79)||(1334-1412)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-78)||(6184-6261)
scaffold0464 (32-82)||(6127-6177)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-60)||(13782-13838)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-78)||(231358-231433)
scaffold0011 (32-80)||(231301-231349)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-79)||(43-115)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 6e-93; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 112 - 328
Target Start/End: Complemental strand, 42902085 - 42901878
Alignment:
Q  112 ttgcgggatttatttgaatgcaagtttgcttccacaaaattaatcaattgattgatgatgaaaacgagtttgtacttattgaagatggaagatgaaggta 211  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  42902085 ttgcgggatttatttgaatgcaagtttgcttccacaacattaatcaattgattgatgatgaaaacgagtttgtacttattgaagatggaagat------- 42901993  T
Q  212 acacacgttttgatcatattaataagtttaacgaatttgtatttgtacttatatatgaatacataggaaaatataaaagatgaagaacaaaaatttctcg 311  Q
      |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42901992 --acacgttttgatcatattaataagtttaacgagtttgtatttgtacttatatatgaatacataagaaaatataaaagatgaagaacaaaaatttctcg 42901895  T
Q  312 tgttggtttcactagct 328  Q
    |||||||||||||||||    
T  42901894 tgttggtttcactagct 42901878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7240826 - 7240744
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 7240744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1738500 - 1738581
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 1738581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1565782 - 1565861
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46840937 - 46840858
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9268833 - 9268751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtattata 9268751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31319452 - 31319534
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 31319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38063966 - 38064044
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23314192 - 23314269
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7482302 - 7482224
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22285776 - 22285694
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattata 22285694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28536804 - 28536882
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36583472 - 36583395
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38441537 - 38441454
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagtactatat 38441454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 94371 - 94448
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36016249 - 36016326
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4790325 - 4790247
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9575486 - 9575407
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||| |||||| || ||||||||||||| || ||||||||| ||||| |||| |||| ||||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtatt 9575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40840175 - 40840243
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||| ||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 7240833 - 7240883
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 7240883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 7482309 - 7482359
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 7482359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 1738493 - 1738444
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 1738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||| ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||||||||||||| ||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 38441544 - 38441596
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||| |||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagtactatat 38441596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 9268840 - 9268887
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28469535 - 28469480
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||| ||| |||||||||||| || ||| |||||    
T  28469535 atacattaacttttgttgacctaaatgtcttttataaataagatcgaagggagtat 28469480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22285783 - 22285829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 36033272 - 36033238
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataaga 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  36033272 acttttgttgacctaaatttatcttataaataaga 36033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 38063959 - 38063905
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatatat 86  Q
    ||||||||||||| ||| |||||||||||||| |||| |||| ||||||| ||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagtattaaatat 38063905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 42902173 - 42902135
Alignment:
Q  77 tattatatatacagtcagcctaatttaagtgacacttgc 115  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  42902173 tattatatatatagtcagcctaatttaactgacacttgc 42902135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 36583479 - 36583528
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| || |||||| |||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 958518 - 958550
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataaga 66  Q
    |||||||||||||||| ||||||||||||||||    
T  958518 ttttgttgacctaaatatctcttataaataaga 958550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||| ||| |||||||||||||| ||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23862 - 23778
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatata 23778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 23869 - 23919
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| ||||||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtattat 23919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48336340 - 48336256
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatata 48336256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47833688 - 47833607
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 47833607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3372198 - 3372118
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20538739 - 20538816
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24704447 - 24704370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53337447 - 53337370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3993053 - 3992973
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatta 3992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42797809 - 42797729
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26231654 - 26231576
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33551278 - 33551200
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6121946 - 6122023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46797802 - 46797725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3904739 - 3904814
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43900626 - 43900547
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51894635 - 51894718
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtattatat 51894718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7579387 - 7579309
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47838670 - 47838748
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52756752 - 52756675
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33621873 - 33621811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 33621811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40913246 - 40913320
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 5986950 - 5986870
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||| |||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagtaatatat 5986870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41469819 - 41469898
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtatt 41469898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3422137 - 3422076
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaata 3422076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 41615732 - 41615791
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaata 41615791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 25855155 - 25855082
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||| ||||||| |||| |||| |||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 29845719 - 29845663
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 60  Q
    |||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 29845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 3993060 - 3993107
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||| ||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50430471 - 50430534
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataa 64  Q
    |||| |||||||||||| |||||||||||  ||||||||||||| || || |||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaataa 50430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 3422144 - 3422194
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 3422194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 47838663 - 47838613
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtattat 47838613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 5986950 - 5987015
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatatata 87  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||  ||||||| |||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtattaaatata 5987015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41469812 - 41469763
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatta 41469763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 24520992 - 24521056
Alignment:
Q  148 aaattaatcaattgattgatgatgaaaacgagtttgtacttattgaagatggaagatgaaggtaa 212  Q
    ||||||| |||| ||||||||||||||| ||| |||||||  || ||| ||||||||||||||||    
T  24520992 aaattaaccaatcgattgatgatgaaaatgagcttgtactcgttaaagctggaagatgaaggtaa 24521056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| |||||||||||||| || |||||| |||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 1716347 - 1716301
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| || | ||||||||||||||||||||||| ||||    
T  1716347 acttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 48336347 - 48336397
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| ||||||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtattat 48336397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 3904727 - 3904682
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 17344284 - 17344219
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||  |||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31013098 - 31013033
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataaga 66  Q
    |||||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| ||||||||||||    
T  31013098 atctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaataaga 31013033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 33621880 - 33621929
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| |||||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagtatta 33621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    ||||||||||| | |||||||||||||||||| |||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 17344297 - 17344345
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||| | |||||||||||||||||||||  ||||| ||||||    
T  17344297 acttttgttgatccaaatttctcttataaataagattggagggagtatt 17344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22722008 - 22721924
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatata 22721924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4238671 - 4238590
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 4238590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51406750 - 51406673
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44785449 - 44785528
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19557105 - 19557183
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49823434 - 49823512
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2787885 - 2787966
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattat 2787966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10298056 - 10297979
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38964469 - 38964388
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtattat 38964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8437502 - 8437422
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatta 8437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21295379 - 21295459
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 21295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34080083 - 34080163
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42170399 - 42170479
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8817439 - 8817518
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 8817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48340474 - 48340392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagtactata 48340392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17653789 - 17653712
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37508998 - 37508921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40691049 - 40691129
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagtatta 40691129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42507408 - 42507488
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatta 42507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9111547 - 9111626
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 9111626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36095733 - 36095811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46208107 - 46208029
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35513550 - 35513473
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6013389 - 6013450
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33942985 - 33943047
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaata 33943047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 17653796 - 17653844
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 8951954 - 8952016
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagacc 68  Q
    ||||||||||||||||||||||||| |||||||| ||   || ||||||||||||| ||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaacaagacc 8952016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 29285838 - 29285876
Alignment:
Q  28 attcacttttgttgacctaaatttctcttataaataaga 66  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29285838 attcacttttgttgacctaaatttatcttataaataaga 29285876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 33128261 - 33128224
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataa 60  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataa 33128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 40691042 - 40690989
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||| ||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtattttata 40690989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 10298063 - 10298111
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 10298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 9213588 - 9213655
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatatata 87  Q
    ||||||||||  | |||||||||||||||||||||| ||||||| ||| ||||| ||||  |||||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagtaaaatatata 9213655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  25 tacattcacttttgttgacctaaatttctcttataaataagacc 68  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 49823427 - 49823380
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 8817432 - 8817382
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||| | ||||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccggaaggagtattat 8817382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 19557098 - 19557052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 34080076 - 34080030
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 43323132 - 43323075
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||| | |||||||||||  ||||||||||||| || ||| |||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaata 43323075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51406759 - 51406804
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9027188 - 9027140
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagtatt 9027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12763707 - 12763785
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54665 - 54746
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 54746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6552732 - 6552647
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatatat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatat 6552647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2890215 - 2890295
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 2890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7785831 - 7785910
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7805752 - 7805831
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43199407 - 43199485
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3304331 - 3304408
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12343193 - 12343270
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32114528 - 32114605
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44498240 - 44498317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25601053 - 25601131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32211416 - 32211494
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15888405 - 15888482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654690 - 31654613
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39571256 - 39571333
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33289314 - 33289394
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatta 33289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7012248 - 7012171
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4245649 - 4245713
Alignment:
Q  16 cagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13578934 - 13578856
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28463688 - 28463614
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggta 75  Q
    |||| ||| ||||||||||||||||||||  ||||||||||||| || ||||||||||||||| |||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8587247 - 8587170
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 27422266 - 27422324
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||| ||| ||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtattat 27422324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7785824 - 7785775
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 33057680 - 33057732
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagtattatatat 86  Q
    ||||||||||| || ||||||||||||||||||||||| | ||||| ||||||    
T  33057680 ttttgttgaccaaactttctcttataaataagaccggatggagtataatatat 33057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 39571249 - 39571201
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 39571201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 54658 - 54611
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2890208 - 2890161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 43199400 - 43199353
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 44498233 - 44498182
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    |||||| |||||| ||| |||||||||||||| ||||||||| |||||||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagtattata 44498182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 13246851 - 13246809
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaata 13246809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 17006982 - 17006916
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || ||||||||||||||| || ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17570265 - 17570331
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || ||||||||||||||| || ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 24692040 - 24692110
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||| ||||||||||| || || ||| ||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 32211407 - 32211361
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 32211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 6899452 - 6899415
Alignment:
Q  45 taaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagtattat 6899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7805745 - 7805696
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||| |||||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagtatta 7805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28999104 - 28999169
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccg 69  Q
    ||||||||||||||||| | ||||||  | ||||||||||| || ||||| |||||||||| ||||    
T  28999104 tagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaataaaaccg 28999169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 3304324 - 3304272
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| |||| |||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagtagtatat 3304272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7012255 - 7012303
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||| | ||| |||||||||||||| ||||||||| ||||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagtatt 7012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||| ||| |||||||||||||| ||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12763700 - 12763652
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| ||||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagtatt 12763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 35011236 - 35011200
Alignment:
Q  53 tcttataaataagaccggaggtagtattatatataca 89  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  35011236 tcttataaataggaccggaggtagtattataaataca 35011200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37149008 - 37149089
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 37149089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 583066 - 582985
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtattat 582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9395427 - 9395350
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20848151 - 20848071
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatta 20848071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36563591 - 36563670
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23360019 - 23359941
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41989460 - 41989538
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11795245 - 11795168
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26350403 - 26350486
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagtactatat 26350486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13033128 - 13033050
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13103101 - 13103023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17025701 - 17025622
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtatt 17025622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37642031 - 37641949
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagtattat 37641949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4444037 - 4443958
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtatt 4443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38361744 - 38361822
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||| |||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13539920 - 13539986
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccgga 71  Q
    |||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||| |||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 2629620 - 2629675
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||| | ||||||||| ||||||||||| |||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagtat 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 9395434 - 9395484
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 9395484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 13103108 - 13103158
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 13103158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccgg 70  Q
    |||||||||||||| ||||||||||||||||||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41989453 - 41989405
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17025708 - 17025755
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 36563584 - 36563537
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6126908 - 6126954
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggag 72  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 13033135 - 13033185
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| || |||||| ||||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtattat 13033185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    ||||||||| ||||||||| | |||||||||||||||||| ||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 11795252 - 11795304
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||| ||| |||||||||||||| ||| ||||| ||||| ||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtataatat 11795304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 26327559 - 26327531
Alignment:
Q  53 tcttataaataagaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||    
T  26327559 tcttataaataagaccggaggtagtatta 26327531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27159411 - 27159492
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 27159492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44668146 - 44668227
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 44668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26471118 - 26471198
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 26471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 47216752 - 47216835
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatat 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 47216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9981724 - 9981646
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39402019 - 39402101
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtata 39402101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31842848 - 31842925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47588390 - 47588470
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatta 47588470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11796010 - 11795931
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14984914 - 14984835
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatt 14984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34042773 - 34042695
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1050965 - 1050888
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23278054 - 23278131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44955259 - 44955336
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 12483684 - 12483761
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 12483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47777534 - 47777611
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25694396 - 25694315
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| || | |||| ||||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagtattat 25694315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47969772 - 47969700
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataagaccggag 72  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17556830 - 17556751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattca-cttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||| |||| |||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 11897126 - 11897053
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12213530 - 12213605
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||||||| ||||| |||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16448161 - 16448239
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||| ||||||||| |||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11897138 - 11897186
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 11989853 - 11989793
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataaga 66  Q
    ||||||||||||||||||||| |||   ||||||||||| || ||||||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaataaga 11989793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 12483684 - 12483625
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatta 12483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||| || |||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 14984921 - 14984970
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 14984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||| ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||| ||||||||| ||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 39402012 - 39401959
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||| ||||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagtaatatata 39401959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17556837 - 17556884
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| || ||||||||||||||| ||||||||| |||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 25694403 - 25694450
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 9981731 - 9981781
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| | ||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagggaatattat 9981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 40676845 - 40676796
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccgga 71  Q
    |||||||| || ||||||||||| |||| | |||||||||||||||||||    
T  40676845 aaatacatccatttttgttgaccaaaatgtttcttataaataagaccgga 40676796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 47588383 - 47588334
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| ||||||||||||||| |||| ||| |||||||    
T  47588383 acttttgttgacccaaaattctcttataaataaaaccgaagggagtatta 47588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1050972 - 1051020
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||| ||||||| ||| |||||||||||||| ||||||||| ||||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagtatt 1051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34042780 - 34042828
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||  |||||||| ||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtatt 34042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8383022 - 8383102
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33052847 - 33052926
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2830412 - 2830334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11572198 - 11572276
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6330192 - 6330115
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13853646 - 13853727
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattat 13853727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26602400 - 26602323
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8099607 - 8099529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35031054 - 35031132
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8417846 - 8417927
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtattat 8417927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6068643 - 6068561
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtattata 6068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6143631 - 6143553
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9644773 - 9644696
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9650790 - 9650713
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13043835 - 13043758
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccgg 70  Q
    ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||| ||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaa 48  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttata 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22896539 - 22896471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||         |||||||||||| |||||||||||||| ||||||||| ||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 26602407 - 26602456
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 26602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 8099614 - 8099662
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 8099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9644780 - 9644828
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9650797 - 9650845
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6330199 - 6330246
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 8383015 - 8382964
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattata 83  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||| ||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagtagtata 8382964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 11572191 - 11572144
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13853639 - 13853592
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 2830419 - 2830465
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35031045 - 35031000
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14936510 - 14936582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 73  Q
    |||||||||| ||||   |||||||||||  ||| ||||||||| |||| ||||||||||||| |||| ||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12937 - 12858
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 12944 - 12993
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||| |||||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagtatta 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37990066 - 37990145
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41478692 - 41478771
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 41478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3055635 - 3055557
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4683985 - 4684063
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15896919 - 15896841
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44397624 - 44397546
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44398763 - 44398685
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13197763 - 13197840
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16044370 - 16044447
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37666663 - 37666740
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13344561 - 13344482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtatt 13344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9047808 - 9047886
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15372303 - 15372217
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattatatata 87  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtattatttata 15372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16243836 - 16243914
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38917575 - 38917653
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6648572 - 6648649
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12337990 - 12338067
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30099235 - 30099310
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtag 76  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41492949 - 41493011
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaata 41493011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12170455 - 12170529
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||| |||||| || |||||| ||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31150730 - 31150659
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 72  Q
    ||||||||||||||| |||||||||||||  ||||||||||||  || ||||||||||||||| || |||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41492942 - 41492893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatta 41492893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 16734855 - 16734791
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccgg 70  Q
    ||||||||||||||||| ||||||  ||||||||||||| || ||||||||||| || |||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttatatattagaccgg 16734791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 6648565 - 6648515
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtattat 6648515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9047801 - 9047752
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 9047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 37990059 - 37990006
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattatata 85  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||| ||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtattttata 37990006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaa 47  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41478685 - 41478636
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 41478636  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3055642 - 3055690
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3055690  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 12170455 - 12170395
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||  ||||||||||||| || |||||||||||||||||| |||| | ||||||||    
T  12170455 aaatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtattat 12170395  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38917568 - 38917521
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44398770 - 44398817
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 13197756 - 13197710
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||  ||||||||||||||| || |||||| |||||| ||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 16243829 - 16243779
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| |||||||||||||| ||||||| | ||||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccggatggagtattat 16243779  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 23227344 - 23227406
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||| ||| | ||| ||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtattat 23227406  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 37666656 - 37666607
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 81  Q
    ||||| ||||||| ||| |||||||||||||| ||||||||| |||||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagtatta 37666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 45294395 - 45294444
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccg 69  Q
    |||||||| || |||||||||||||||||||| ||||| |||||| ||||    
T  45294395 ccaaatactttaacttttgttgacctaaatttttcttaaaaataaaaccg 45294444  T

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Target: scaffold0009 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 49579 - 49503
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 49503  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold1707 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1412 - 1334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagtat 1334  T

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Target: scaffold0464 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6184 - 6261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 6177 - 6127
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtattat 82  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| ||||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtattat 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 13782 - 13838
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 60  Q
    |||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 13838  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 78  Q
    |||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| || || |||||| ||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 231349 - 231301
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 80  Q
    ||||||||||||||||  ||||| |||||||| ||||||||| ||||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagtatt 231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43 - 115
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 79  Q
    |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||  |||||||| |||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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