View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19337_low_8 (Length: 444)
Name: NF19337_low_8
Description: NF19337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19337_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 6704332 - 6703899
Alignment:
| Q |
1 |
tatcattatctatattttcttttaaaaatatctaccacctctttcatatttgccatcttcctctnnnnnnn--tgtcattgatttctaaccaaattacat |
98 |
Q |
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| T |
6704332 |
tatcattatctatattttcttttaaaaatatctaccacctctttcatattcgccatcttcctctaaaaaaaaatgtcattgatttctaaccaaattacat |
6704233 |
T |
|
| Q |
99 |
gataggagatgttcttcctttcatcaattcttgaaacatctcagcacaaaaacaatacacaattcaatacactcttttatactatgtctaagcatacata |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
6704232 |
gataggagatgttcttcctttcatcaattcttgaaacatctcagcacacaaacattacacaattcgatacactcttttatactatgtctaagcatacata |
6704133 |
T |
|
| Q |
199 |
tatatgtgcatgttttagtcgaaagttaatgatttaaa-gtacatatcaaactatattgttgtatttgcattggttggtgatttatgtgtactttacttt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
6704132 |
tatatgtgcatgttttagtcgaaagttaatgatttaaaagtacatatcaaactatattgttgtatttacattggttggtgatttatgtgtactttacttt |
6704033 |
T |
|
| Q |
298 |
tacatacaaattaatcatcatatttatgtgcacgaggccatgcattgagtgatattattatccattagtgtatatgtgccattatggtgtgtccaccatg |
397 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6704032 |
tacatacaaattaatcatcatatttatgtgcacgaggccatgcattgagtgatattattatccattagtgtatatgtgccattatggtgtgtccaccatg |
6703933 |
T |
|
| Q |
398 |
aatgaaactttg-aatacttcatgcacacacttc |
430 |
Q |
| |
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|||| ||||||| ||||||||||||||||||||| |
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| T |
6703932 |
aatgcaactttgaaatacttcatgcacacacttc |
6703899 |
T |
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