View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19340_high_5 (Length: 357)

Name: NF19340_high_5
Description: NF19340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19340_high_5
NF19340_high_5
[»] chr1 (17 HSPs)
chr1 (152-341)||(46321049-46321252)
chr1 (152-273)||(37382928-37383049)
chr1 (152-272)||(41768955-41769075)
chr1 (152-273)||(7699232-7699350)
chr1 (152-273)||(33205191-33205309)
chr1 (152-272)||(35567694-35567817)
chr1 (152-272)||(4296026-4296141)
chr1 (152-272)||(50986725-50986833)
chr1 (13-70)||(46320586-46320643)
chr1 (20-69)||(37383132-37383181)
chr1 (20-69)||(35567900-35567949)
chr1 (20-69)||(41769158-41769207)
chr1 (20-69)||(50986915-50986964)
chr1 (20-69)||(4295895-4295944)
chr1 (26-67)||(7699442-7699483)
chr1 (234-272)||(11166066-11166104)
chr1 (20-53)||(33206142-33206175)
[»] chr4 (9 HSPs)
chr4 (152-341)||(14200165-14200371)
chr4 (152-272)||(37080359-37080476)
chr4 (152-273)||(1375874-1375992)
chr4 (152-272)||(36039791-36039908)
chr4 (152-223)||(39455563-39455634)
chr4 (20-69)||(37080559-37080608)
chr4 (20-69)||(36039662-36039711)
chr4 (28-70)||(14200453-14200495)
chr4 (37-70)||(39455448-39455481)
[»] chr3 (9 HSPs)
chr3 (152-341)||(42373820-42374023)
chr3 (152-341)||(21627072-21627272)
chr3 (152-272)||(16860518-16860635)
chr3 (152-273)||(36099707-36099825)
chr3 (152-272)||(4330522-4330638)
chr3 (20-70)||(16860717-16860767)
chr3 (20-69)||(42373179-42373228)
chr3 (20-69)||(4331963-4332012)
chr3 (20-69)||(21628195-21628243)
[»] chr8 (2 HSPs)
chr8 (152-341)||(44842128-44842328)
chr8 (37-69)||(44842013-44842045)
[»] chr7 (9 HSPs)
chr7 (152-341)||(46371789-46371989)
chr7 (153-341)||(19624668-19624873)
chr7 (152-273)||(46741629-46741743)
chr7 (152-272)||(29053977-29054081)
chr7 (20-69)||(29053845-29053894)
chr7 (20-69)||(46371657-46371706)
chr7 (152-209)||(7671199-7671257)
chr7 (20-61)||(7671134-7671175)
chr7 (240-273)||(7671255-7671288)
[»] chr2 (4 HSPs)
chr2 (152-342)||(345047-345248)
chr2 (152-272)||(13099395-13099513)
chr2 (209-273)||(29601403-29601467)
chr2 (37-69)||(345332-345364)
[»] chr5 (5 HSPs)
chr5 (152-272)||(34986272-34986389)
chr5 (153-273)||(2842061-2842178)
chr5 (152-273)||(2852150-2852266)
chr5 (20-69)||(34986472-34986521)
chr5 (154-273)||(42866748-42866864)
[»] chr6 (3 HSPs)
chr6 (207-272)||(25461308-25461373)
chr6 (155-211)||(25461390-25461446)
chr6 (37-69)||(25461533-25461565)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 152 - 341
Target Start/End: Original strand, 46321049 - 46321252
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46321049 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcagtcgtt 46321148  T
Q  252 acattgctccaccatc--------------ttcatctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46321149 acattgctccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 46321248  T
Q  338 tttt 341  Q
    ||||    
T  46321249 tttt 46321252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 37383049 - 37382928
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37383049 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcctcctcctccctccttcagtgtgtctccggcggtcgtt 37382950  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  37382949 acattgctccaccatcttcatc 37382928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 41769075 - 41768955
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41769075 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcctcctcctccctccttcagtgtgtctccggcggtcgtt 41768976  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  41768975 acattgctccaccatcttcat 41768955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 7699350 - 7699232
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||| |||||||||||||||    
T  7699350 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcc---tcctccctccttcagtgtttctccggcggtcgtt 7699254  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  7699253 acattgctccaccatcttcatc 7699232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 33205309 - 33205191
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| |   ||||||||||||||||||||||||||||||||||    
T  33205309 ctctctcttgaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgac---tcctccctccttcagtgtgtctccggcggtcgtt 33205213  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  33205212 acattgctccaccatcttcatc 33205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 35567817 - 35567694
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccg---ccgcctcctccctccttcagtgtgtctccggcggtc 248  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||   || |||||||||||||||||||||||| ||||||||    
T  35567817 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcctcctcctcctccctccttcagtgtgtctacggcggtc 35567718  T
Q  249 gttacattgctccaccatcttcat 272  Q
    ||||||||||||| ||||||||||    
T  35567717 gttacattgctccgccatcttcat 35567694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 4296026 - 4296141
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||   |||||||||||||||||||||||  ||||||||||||||||||    
T  4296026 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaacccta---gccgccgcctcctccctccttca--gtgtctccggcggtcgtt 4296120  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  4296121 acattgctccaccatcttcat 4296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 50986833 - 50986725
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||          ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  50986833 ctctctcttcaccaaagaaatctggaaaactctctcatta---------ccctagccgccgcc---tcctccctccttcagtgtgtctccggcggtcgtt 50986746  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||| ||||||||||||||    
T  50986745 acattgatccaccatcttcat 50986725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 46320586 - 46320643
Alignment:
Q  13 aattctcaaaagtctatacccctttacccctttctatctcgtacaaacctagagtata 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46320586 aattctcaaaagtctatacccctttacccctttctatctcgtacaaacttagagtata 46320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37383181 - 37383132
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37383181 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 37383132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 35567949 - 35567900
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35567949 aaaagtctatacccctttacccctttctatctcggacaaacctagagtat 35567900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 41769207 - 41769158
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41769207 aaaagtctacacccctttacccctttctatctcgtacaaacctagagtat 41769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 50986964 - 50986915
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50986964 aaaagtcgatacccctttacccctttctatctcgtacaaacctagagtat 50986915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 4295895 - 4295944
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  4295895 aaaagtccatacccctttacccctttctatctcgtacaaatctagagtat 4295944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 7699483 - 7699442
Alignment:
Q  26 ctatacccctttacccctttctatctcgtacaaacctagagt 67  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7699483 ctatacccctttacccctttctatctcgtacaaacctagagt 7699442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 272
Target Start/End: Original strand, 11166066 - 11166104
Alignment:
Q  234 gtgtctccggcggtcgttacattgctccaccatcttcat 272  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11166066 gtgtctccggcggtcgttacattgctccaccatcttcat 11166104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 33206175 - 33206142
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcg 53  Q
    ||||||||||||||||||||| ||||||||||||    
T  33206175 aaaagtctatacccctttacctctttctatctcg 33206142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 152 - 341
Target Start/End: Complemental strand, 14200371 - 14200165
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccg---ccgcctcctccctccttcagtgtgtctccggcggtc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   || |||||||||||||||||||||||||||||||||    
T  14200371 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaaaccctagccgccgcctcctcctcctccctccttcagtgtgtctccggcggtc 14200272  T
Q  249 gttacattgctccaccatc--------------ttcatctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgacc 334  Q
    |||||||||||||||||||              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14200271 gttacattgctccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaactcaaagatgattttaaatttccctacgacc 14200172  T
Q  335 atctttt 341  Q
    |||||||    
T  14200171 atctttt 14200165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 37080476 - 37080359
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  37080476 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcc---tcctccctccttcagtgtgtctccggcggtcgtt 37080380  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  37080379 acattgctccaccatcttcat 37080359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 1375992 - 1375874
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||   |||||||||| |||||||||||||||||||||||    
T  1375992 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcc---tcctccctccctcagtgtgtctccggcggtcgtt 1375896  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  1375895 acattgctccaccatcttcatc 1375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 36039791 - 36039908
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  36039791 ctctctcttcaccaaagaaatctggaaaactctctcattcttaaacaaaccctagccg---ccgcctcctccctcattcagtgtgtctccggcggtcgtt 36039887  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  36039888 acattgctccaccatcttcat 36039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 39455563 - 39455634
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctcc 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  39455563 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaaaccctagccgacgcctcctcctcc 39455634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37080608 - 37080559
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37080608 aaaagtctacacccctttacccctttctatctcgtacaaacctagagtat 37080559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 36039662 - 36039711
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  36039662 aaaagtcgatactcctttacccctttctatctcgtacaaacctagagtat 36039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 14200495 - 14200453
Alignment:
Q  28 atacccctttacccctttctatctcgtacaaacctagagtata 70  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  14200495 atacccctctacccctttctatctcgtacaaacctagagtata 14200453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 39455448 - 39455481
Alignment:
Q  37 tacccctttctatctcgtacaaacctagagtata 70  Q
    ||||| ||||||||||||||||||||||||||||    
T  39455448 tacccgtttctatctcgtacaaacctagagtata 39455481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 152 - 341
Target Start/End: Original strand, 42373820 - 42374023
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42373820 ctctctcttcaccaaagaaatctggaaaactctctcattctcgaacaaaccctagccgccgcctcctcctcactccttcagtgtgtctccggcggtcgtt 42373919  T
Q  252 acattgctccaccatc--------------ttcatctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||              |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  42373920 acattgctccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctacgaccatc 42374019  T
Q  338 tttt 341  Q
    ||||    
T  42374020 tttt 42374023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 152 - 341
Target Start/End: Complemental strand, 21627272 - 21627072
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  21627272 ctctctcttcaccaaagaaatctggaaaactctctgattctcaaacaaaccctagccgccgcc---tcctccctccttcagtgtgtctccggcggtcgtt 21627176  T
Q  252 acattgctccaccatcttcatc--------------tgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||||||||              |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21627175 acattgctccaccatcttcatcctctccttttcatttgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctatgaccatc 21627076  T
Q  338 tttt 341  Q
    ||||    
T  21627075 tttt 21627072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 16860635 - 16860518
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||    
T  16860635 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccc---ccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 16860539  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  16860538 acattgctccaccatcttcat 16860518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 36099707 - 36099825
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  36099707 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgccg---cctccctccttcagtgtgtctccggcgatcgtt 36099803  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  36099804 acattgctccaccatcttcatc 36099825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 4330638 - 4330522
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||   |||||||||||||||||||||||||||||||||||||| ||||    
T  4330638 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaa-accta---gccgccgcctcctccctccttcagtgtgtctccggcggccgtt 4330543  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  4330542 acattgctccaccatcttcat 4330522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 16860767 - 16860717
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtata 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16860767 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtata 16860717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 42373179 - 42373228
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42373179 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 42373228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 4332012 - 4331963
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4332012 aaaagtctacacccctttacccctttctatctcgtacaaacctagagtat 4331963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21628243 - 21628195
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    |||||||||||||| ||||| | |||||||||||||||||| ||||||||    
T  21628243 aaaagtctataccc-tttactcatttctatctcgtacaaacgtagagtat 21628195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 152 - 341
Target Start/End: Original strand, 44842128 - 44842328
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  44842128 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccg---ccgcctcctccctccttcagtgtgtctccggcggtcgtt 44842224  T
Q  252 acattgctccaccatcttcatc--------------tgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||||||||              |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  44842225 acattgctccaccatcttcatcctctccttttcatttgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctacgaccatc 44842324  T
Q  338 tttt 341  Q
    ||||    
T  44842325 tttt 44842328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 44842013 - 44842045
Alignment:
Q  37 tacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||| |||||||||||||||||||||||    
T  44842013 tacccctttttatctcgtacaaacctagagtat 44842045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 152 - 341
Target Start/End: Original strand, 46371789 - 46371989
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  46371789 ctctatcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccg---ccgcctcctccctccttcagtgtgtccccggcggtcgtt 46371885  T
Q  252 acattgctccaccatc--------------ttcatctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||              |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  46371886 acattgctccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctacgaccatc 46371985  T
Q  338 tttt 341  Q
    ||||    
T  46371986 tttt 46371989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 19624873 - 19624668
Alignment:
Q  153 tctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctcc---ctccttcagtgtgtctccggcggtcg 249  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||| || ||||||||   ||||||||||||||||||||||||||    
T  19624873 tctctcttcaccaaagaaatctggaaaactatctcattctcaaacaaaccatagccgcctcctcctcctcctccctccttcagtgtgtctccggcggtcg 19624774  T
Q  250 ttacattgctccaccatctt--------------catctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgacca 335  Q
    |||||||| |||||||||||              |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  19624773 ttacattggtccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctacgacca 19624674  T
Q  336 tctttt 341  Q
    ||||||    
T  19624673 tctttt 19624668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 46741629 - 46741743
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| ||||||||    |||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  46741629 ctctctcttcaccaaagaaatctggaaaactc----attctcaaacaaaccctagccg---ccgcctcctccctccttcagtgtgtctccggcggtcgtt 46741721  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  46741722 acattgctccaccatcttcatc 46741743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 29053977 - 29054081
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||                |||||||||||||||||||||||||||    
T  29053977 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagcc----------------tccttcagtgtgtctccggcggtcgtt 29054060  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  29054061 acattgctccaccatcttcat 29054081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29053845 - 29053894
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29053845 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 29053894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 46371657 - 46371706
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46371657 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 46371706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 7671199 - 7671257
Alignment:
Q  152 ctctctcttcaccaaagaaa-tctagaaaactctctcattctcaaacaagccctagccg 209  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  7671199 ctctctcttcaccaaagaaaatctggaaaactctctcattctcaaacaaaccctagccg 7671257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7671134 - 7671175
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacc 61  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  7671134 aaaagtctatacccctttacccctttctatctaggacaaacc 7671175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 7671255 - 7671288
Alignment:
Q  240 ccggcggtcgttacattgctccaccatcttcatc 273  Q
    |||| |||||||||||||||||||||||||||||    
T  7671255 ccggtggtcgttacattgctccaccatcttcatc 7671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 6e-59; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 152 - 342
Target Start/End: Complemental strand, 345248 - 345047
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||   ||||||||||||||||||||||||| ||||||||    
T  345248 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgcagcc---tcctccctccttcagtgtgtctccgacggtcgtt 345152  T
Q  252 acattgctccaccatctt--------------catctgtaattatactctattaaatttatttcaactcaaagatgattttaaatttccctacgaccatc 337  Q
    ||||||||||||||||||              |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  345151 acattgctccaccatcttcatcctctccttttcatctgtaattatactctatcaaatttatttcaagtcaaagatgattttaaatttccctacgaccatc 345052  T
Q  338 ttttt 342  Q
     ||||    
T  345051 atttt 345047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 13099513 - 13099395
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||  || |||||||||||||||    
T  13099513 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgtcgcctcctcctccctccttca--gtttctccggcggtcgtt 13099416  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  13099415 acattgctccaccatcttcat 13099395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 29601403 - 29601467
Alignment:
Q  209 gccgccgcctcctccctccttcagtgtgtctccggcggtcgttacattgctccaccatcttcatc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29601403 gccgccgcctcctccctccttcagtgtgtctccggcggtcgttacattgctccaccatcttcatc 29601467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 345364 - 345332
Alignment:
Q  37 tacccctttctatctcgtacaaacctagagtat 69  Q
    |||||||||||||||||||||||||||||||||    
T  345364 tacccctttctatctcgtacaaacctagagtat 345332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 34986389 - 34986272
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  34986389 ctctctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgccgcc---tcctccctccttcagtgtgtctccggcggtcgtt 34986293  T
Q  252 acattgctccaccatcttcat 272  Q
    |||||||||||||||||||||    
T  34986292 acattgctccaccatcttcat 34986272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 2842061 - 2842178
Alignment:
Q  153 tctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtta 252  Q
    |||||||||||||||||||||| ||||||||||||||||||||| || |||||||||   |||||||||||||||||||||||||||||||||||||||     
T  2842061 tctctcttcaccaaagaaatctggaaaactctctcattctcaaataaaccctagccg---ccgcctcctccctccttcagtgtgtctccggcggtcgttt 2842157  T
Q  253 cattgctccaccatcttcatc 273  Q
    |||||||||||||||||||||    
T  2842158 cattgctccaccatcttcatc 2842178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 2852150 - 2852266
Alignment:
Q  152 ctctctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcggtcgtt 251  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||| ||   ||||||||||||||||||||| ||||||    
T  2852150 ctctctcttcaccaaagaaatctggaaaactctc--attctcaaacaaaccctagccgccgccgccacc---ctccttcagtgtgtctccggcagtcgtt 2852244  T
Q  252 acattgctccaccatcttcatc 273  Q
    ||||||||||||||||||||||    
T  2852245 acattgctccaccatcttcatc 2852266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 34986521 - 34986472
Alignment:
Q  20 aaaagtctatacccctttacccctttctatctcgtacaaacctagagtat 69  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34986521 aaaagtctatacccctttacccctttctatctcgtacaaacttagagtat 34986472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 42866748 - 42866864
Alignment:
Q  154 ctctcttcaccaaagaaat-ctagaaaactctctcattctcaaacaagccctagccgccgccgcctcctccctccttcagtgtgtctccggcg--gtcgt 250  Q
    ||||||||||||||||||| ||  ||||||||||||||||| ||||| ||||||| ||||      ||||| |||||||||||||||||||||  | | |    
T  42866748 ctctcttcaccaaagaaattctgtaaaactctctcattctctaacaaaccctagctgccg------cctccgtccttcagtgtgtctccggcggcgcctt 42866841  T
Q  251 tacattgctccaccatcttcatc 273  Q
    | ||||| |||||||||||||||    
T  42866842 ttcattgttccaccatcttcatc 42866864  T

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Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 25461373 - 25461308
Alignment:
Q  207 ccgccgccgcctcctccctccttcagtgtgtctccggcggtcgttacattgctccaccatcttcat 272  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25461373 ccgcctccgcctcctccctccttcagtgtgtctccggcggtcgttacattgctccaccatcttcat 25461308  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 25461446 - 25461390
Alignment:
Q  155 tctcttcaccaaagaaatctagaaaactctctcattctcaaacaagccctagccgcc 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  25461446 tctcttcaccaaagaaatctggaaaactctctcattctcaaacaaaccctagccgcc 25461390  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 25461565 - 25461533
Alignment:
Q  37 tacccctttctatctcgtacaaacctagagtat 69  Q
    |||||||||||||||||||||||||||||||||    
T  25461565 tacccctttctatctcgtacaaacctagagtat 25461533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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