View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19340_low_7 (Length: 315)

Name: NF19340_low_7
Description: NF19340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19340_low_7
NF19340_low_7
[»] chr1 (33 HSPs)
chr1 (13-315)||(46319973-46320273)
chr1 (79-239)||(45977202-45977368)
chr1 (15-90)||(45977384-45977459)
chr1 (89-188)||(42799250-42799357)
chr1 (191-313)||(28989298-28989426)
chr1 (208-313)||(26545023-26545136)
chr1 (208-313)||(28359080-28359193)
chr1 (191-315)||(38830507-38830637)
chr1 (208-315)||(10380399-10380514)
chr1 (196-315)||(14281614-14281740)
chr1 (208-315)||(40161182-40161297)
chr1 (196-315)||(2352333-2352458)
chr1 (196-315)||(2961103-2961228)
chr1 (196-311)||(45536162-45536283)
chr1 (193-314)||(7796086-7796213)
chr1 (196-313)||(10065254-10065377)
chr1 (196-315)||(9301918-9302043)
chr1 (196-315)||(23398104-23398229)
chr1 (213-315)||(24594933-24595042)
chr1 (208-315)||(1673981-1674096)
chr1 (208-315)||(15289797-15289912)
chr1 (208-315)||(33325357-33325472)
chr1 (196-313)||(9548698-9548821)
chr1 (213-315)||(26550301-26550411)
chr1 (13-65)||(42799200-42799252)
chr1 (208-315)||(29312463-29312578)
chr1 (208-313)||(26733811-26733924)
chr1 (196-315)||(34718915-34719033)
chr1 (208-313)||(6784685-6784798)
chr1 (243-308)||(30264821-30264891)
chr1 (268-315)||(23537398-23537445)
chr1 (267-315)||(24463314-24463361)
chr1 (196-243)||(26070823-26070868)
[»] chr2 (30 HSPs)
chr2 (13-315)||(39377860-39378163)
chr2 (208-315)||(20427025-20427140)
chr2 (213-315)||(40430680-40430790)
chr2 (196-315)||(44737282-44737406)
chr2 (210-315)||(11363009-11363122)
chr2 (192-315)||(16241262-16241391)
chr2 (211-311)||(43657937-43658045)
chr2 (213-315)||(25891958-25892068)
chr2 (213-315)||(32880931-32881041)
chr2 (196-313)||(42263469-42263592)
chr2 (191-315)||(29866106-29866236)
chr2 (196-315)||(6761489-6761614)
chr2 (196-315)||(7765793-7765918)
chr2 (196-311)||(13775739-13775860)
chr2 (243-315)||(30864722-30864799)
chr2 (208-313)||(32197402-32197515)
chr2 (213-304)||(2100052-2100151)
chr2 (208-315)||(41260049-41260164)
chr2 (208-315)||(42341642-42341757)
chr2 (213-315)||(45065594-45065704)
chr2 (196-308)||(32750341-32750459)
chr2 (223-315)||(11711348-11711448)
chr2 (208-315)||(18452593-18452707)
chr2 (208-304)||(41205499-41205603)
chr2 (208-315)||(38598480-38598595)
chr2 (196-315)||(39377835-39377955)
chr2 (213-315)||(1944548-1944658)
chr2 (213-267)||(20360521-20360578)
chr2 (213-315)||(3264946-3265052)
chr2 (271-315)||(27596729-27596773)
[»] chr7 (22 HSPs)
chr7 (196-315)||(12763253-12763378)
chr7 (213-315)||(3411356-3411466)
chr7 (196-315)||(23248667-23248792)
chr7 (196-315)||(30866269-30866394)
chr7 (196-315)||(5347722-5347846)
chr7 (196-315)||(12426529-12426654)
chr7 (196-315)||(20397839-20397964)
chr7 (196-315)||(34281668-34281793)
chr7 (208-315)||(7107654-7107769)
chr7 (208-315)||(29770346-29770461)
chr7 (213-315)||(32050094-32050204)
chr7 (208-315)||(5909480-5909595)
chr7 (208-313)||(7463475-7463589)
chr7 (213-313)||(19979507-19979616)
chr7 (196-315)||(35427658-35427783)
chr7 (208-315)||(10599324-10599440)
chr7 (208-315)||(12085033-12085148)
chr7 (225-313)||(46680855-46680951)
chr7 (192-243)||(13807237-13807286)
chr7 (212-269)||(36655434-36655494)
chr7 (245-297)||(15074659-15074716)
chr7 (207-243)||(48082807-48082843)
[»] chr6 (20 HSPs)
chr6 (196-315)||(7405468-7405593)
chr6 (196-315)||(24949630-24949755)
chr6 (191-315)||(17225237-17225367)
chr6 (196-315)||(31971029-31971154)
chr6 (213-315)||(30686568-30686678)
chr6 (214-315)||(390820-390929)
chr6 (196-311)||(885601-885722)
chr6 (196-315)||(33859514-33859639)
chr6 (208-315)||(6045690-6045805)
chr6 (196-315)||(14931282-14931402)
chr6 (213-315)||(8558928-8559037)
chr6 (196-311)||(6047795-6047916)
chr6 (213-311)||(766441-766547)
chr6 (243-313)||(6801598-6801673)
chr6 (213-315)||(34639054-34639164)
chr6 (268-315)||(22898877-22898924)
chr6 (208-244)||(2972173-2972209)
chr6 (268-308)||(13144286-13144326)
chr6 (268-315)||(22880942-22880989)
chr6 (243-304)||(36363-36429)
[»] chr5 (33 HSPs)
chr5 (208-315)||(9601602-9601717)
chr5 (196-313)||(23411191-23411314)
chr5 (210-315)||(41046852-41046965)
chr5 (213-315)||(20578669-20578779)
chr5 (213-315)||(41989588-41989698)
chr5 (208-315)||(7749942-7750057)
chr5 (196-313)||(903965-904088)
chr5 (213-315)||(6338329-6338439)
chr5 (196-313)||(31802957-31803080)
chr5 (196-315)||(13144904-13145029)
chr5 (196-315)||(26898215-26898340)
chr5 (196-315)||(37699779-37699904)
chr5 (208-315)||(21090385-21090500)
chr5 (191-313)||(36417041-36417169)
chr5 (213-315)||(15569345-15569455)
chr5 (213-313)||(18353222-18353330)
chr5 (196-315)||(25027718-25027843)
chr5 (196-315)||(29374194-29374319)
chr5 (213-304)||(2825895-2825994)
chr5 (208-315)||(42311819-42311934)
chr5 (208-313)||(2959248-2959361)
chr5 (208-313)||(2967717-2967830)
chr5 (196-315)||(1643368-1643493)
chr5 (196-315)||(7053672-7053796)
chr5 (196-315)||(36418984-36419109)
chr5 (243-315)||(1108307-1108384)
chr5 (215-313)||(7945863-7945969)
chr5 (208-313)||(41815211-41815324)
chr5 (229-313)||(6910738-6910830)
chr5 (215-315)||(14338839-14338947)
chr5 (213-313)||(21610315-21610423)
chr5 (243-304)||(16089134-16089200)
chr5 (196-243)||(3814075-3814120)
[»] chr3 (39 HSPs)
chr3 (213-315)||(29019759-29019869)
chr3 (213-313)||(23825175-23825283)
chr3 (208-315)||(8243691-8243806)
chr3 (208-315)||(14768122-14768237)
chr3 (213-313)||(335389-335497)
chr3 (196-315)||(10049692-10049817)
chr3 (196-315)||(26999045-26999170)
chr3 (207-315)||(49122968-49123084)
chr3 (213-315)||(9190052-9190162)
chr3 (208-313)||(19202259-19202372)
chr3 (191-315)||(51698108-51698238)
chr3 (196-315)||(6086900-6087025)
chr3 (196-315)||(28945680-28945805)
chr3 (208-315)||(9440137-9440252)
chr3 (208-315)||(9465080-9465195)
chr3 (208-315)||(25113358-25113473)
chr3 (208-315)||(28564944-28565059)
chr3 (208-315)||(379094-379212)
chr3 (196-315)||(21653343-21653468)
chr3 (196-315)||(40214899-40215024)
chr3 (196-315)||(40464546-40464671)
chr3 (207-315)||(52114032-52114148)
chr3 (208-315)||(25846520-25846635)
chr3 (208-311)||(44593210-44593321)
chr3 (208-315)||(47449940-47450055)
chr3 (213-315)||(42605841-42605951)
chr3 (208-309)||(1122305-1122414)
chr3 (208-313)||(18765267-18765380)
chr3 (230-308)||(8825762-8825848)
chr3 (208-315)||(22003820-22003935)
chr3 (208-315)||(22011337-22011452)
chr3 (268-313)||(40141951-40141996)
chr3 (214-313)||(42225577-42225684)
chr3 (268-315)||(3484356-3484403)
chr3 (213-310)||(13826141-13826246)
chr3 (268-306)||(8987806-8987844)
chr3 (268-315)||(16660357-16660406)
chr3 (196-267)||(26123067-26123139)
chr3 (268-313)||(55139199-55139244)
[»] scaffold0221 (1 HSPs)
scaffold0221 (196-315)||(11054-11179)
[»] chr8 (30 HSPs)
chr8 (196-315)||(2339314-2339439)
chr8 (196-315)||(41915618-41915743)
chr8 (208-311)||(33642486-33642597)
chr8 (213-311)||(40465252-40465358)
chr8 (191-313)||(34028409-34028537)
chr8 (208-313)||(22781908-22782021)
chr8 (212-315)||(12270069-12270180)
chr8 (208-315)||(25847991-25848106)
chr8 (208-315)||(29563682-29563797)
chr8 (208-315)||(30923930-30924045)
chr8 (208-315)||(32159043-32159158)
chr8 (208-315)||(43135068-43135183)
chr8 (196-315)||(2229069-2229194)
chr8 (196-315)||(42351197-42351322)
chr8 (196-315)||(45145893-45146014)
chr8 (208-315)||(7668215-7668330)
chr8 (208-315)||(37564640-37564755)
chr8 (213-304)||(40834171-40834270)
chr8 (208-313)||(41569105-41569218)
chr8 (213-306)||(43295077-43295178)
chr8 (208-315)||(11293196-11293311)
chr8 (208-315)||(42189827-42189942)
chr8 (214-315)||(3799731-3799841)
chr8 (213-315)||(8242247-8242357)
chr8 (194-311)||(27793225-27793348)
chr8 (213-313)||(25878186-25878293)
chr8 (243-315)||(33837604-33837681)
chr8 (209-313)||(29916553-29916665)
chr8 (196-304)||(34157696-34157810)
chr8 (208-244)||(24822826-24822862)
[»] chr4 (41 HSPs)
chr4 (195-313)||(38687909-38688033)
chr4 (208-315)||(5970288-5970403)
chr4 (213-315)||(580425-580535)
chr4 (215-313)||(21221143-21221249)
chr4 (208-313)||(31227297-31227410)
chr4 (220-313)||(31854400-31854501)
chr4 (196-315)||(2385194-2385319)
chr4 (196-315)||(6246632-6246757)
chr4 (196-315)||(36099511-36099636)
chr4 (243-315)||(7350253-7350330)
chr4 (216-315)||(47948963-47949070)
chr4 (212-315)||(56216258-56216369)
chr4 (213-315)||(2279548-2279658)
chr4 (196-313)||(15170882-15171005)
chr4 (196-313)||(19485598-19485721)
chr4 (209-315)||(23125670-23125784)
chr4 (213-310)||(39877432-39877537)
chr4 (196-315)||(4758776-4758901)
chr4 (207-315)||(3085881-3085996)
chr4 (196-315)||(53621327-53621452)
chr4 (243-315)||(18430302-18430379)
chr4 (243-311)||(35328967-35329040)
chr4 (215-313)||(2411856-2411962)
chr4 (210-313)||(54612000-54612101)
chr4 (208-315)||(32517779-32517896)
chr4 (208-313)||(55292121-55292234)
chr4 (213-315)||(49122535-49122644)
chr4 (243-315)||(18135360-18135437)
chr4 (210-313)||(52535962-52536073)
chr4 (213-315)||(44199986-44200096)
chr4 (193-314)||(53303761-53303888)
chr4 (268-315)||(27006529-27006576)
chr4 (268-315)||(51833036-51833083)
chr4 (208-300)||(20688455-20688555)
chr4 (213-311)||(38046638-38046744)
chr4 (243-315)||(39834298-39834375)
chr4 (208-290)||(29833274-29833364)
chr4 (195-243)||(44111849-44111895)
chr4 (243-302)||(21229262-21229326)
chr4 (208-244)||(50121446-50121482)
chr4 (196-243)||(53225748-53225793)
[»] scaffold2107 (1 HSPs)
scaffold2107 (196-313)||(469-592)
[»] scaffold0123 (1 HSPs)
scaffold0123 (208-313)||(29270-29383)
[»] scaffold0002 (1 HSPs)
scaffold0002 (196-313)||(492304-492427)
[»] scaffold0144 (1 HSPs)
scaffold0144 (196-315)||(38849-38974)
[»] scaffold0024 (1 HSPs)
scaffold0024 (196-315)||(35978-36103)
[»] scaffold0007 (1 HSPs)
scaffold0007 (196-304)||(77344-77458)
[»] scaffold0067 (1 HSPs)
scaffold0067 (213-313)||(5242-5350)
[»] scaffold0592 (2 HSPs)
scaffold0592 (213-311)||(407-513)
scaffold0592 (210-242)||(390-422)
[»] scaffold0246 (1 HSPs)
scaffold0246 (208-313)||(15181-15293)
[»] scaffold0009 (1 HSPs)
scaffold0009 (208-315)||(3640-3764)


Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-152; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 46319973 - 46320273
Alignment:
Q  13 aatatattatatagaaagaaatgtgtaatgcactaatgctacacatgcaattatgtataattaaatatgaaagatgttaagcctattgtgattagtagaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46319973 aatatattatatagaaagaaatgtgtaatgcactaatgctacacatgcaattatgtataattaaatatgaaagatgttaagcctattgtgattagtagaa 46320072  T
Q  113 ttatttatttactttcacaaaaactaatgaagaattgctcctattgataatattgtctttgtctaatatggtccactgtatactactccctccggggtct 212  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  46320073 ttatttatttactttcacaaaagctaatgaagaattgctcctgttgataatattgtctttgtctaatatggtccactgtatactactccctcc--gatct 46320170  T
Q  213 tatttataagagaaaattgactttttagatttgaataatatatgtatctagtcaataaaccaaatacataaattatttgatgtatctaaaaagtaaattg 312  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46320171 tatttataagagaaggttgactttttagatttgaataatatatgtatctagtcaataaaccaaatacataaattatttgatgtatctaaaaagtaaattg 46320270  T
Q  313 tct 315  Q
    |||    
T  46320271 tct 46320273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 45977368 - 45977202
Alignment:
Q  79 atgaaagatgttaagcctattgtgattagtagaattatttatttactttcacaaaaactaatgaagaattgctcctat--------tgataatattgtct 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |        ||||||||||||||    
T  45977368 atgaaagatgttaagcctattgtgattagtagaattatttatttgtcttcacaaaaactaatgaagaattgctccttttgatggggtgataatattgtct 45977269  T
Q  171 ttgtctaatatggtccactgtatactactccctccggggtcttatttataagagaaaattgacttttta 239  Q
    ||||| ||||||||||||||||||||||||||| |  ||| ||  |||||||| ||| |||||||||||    
T  45977268 ttgtccaatatggtccactgtatactactcccttc--ggtttttattataagaaaaagttgacttttta 45977202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 45977459 - 45977384
Alignment:
Q  15 tatattatatagaaagaaatgtgtaatgcactaatgctacacatgcaattatgtataattaaatatgaaagatgtt 90  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  45977459 tatattatatagaaagaaacgtgtaatgcactaatgctacatatgcaattatgtataattaaacatgaaagatgtt 45977384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 42799250 - 42799357
Alignment:
Q  89 ttaagcctattgtgattagtagaattatttatttactttcacaaaaactaatgaagaattgctcc--------tattgataatattgtctttgtctaata 180  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||        | |||||||||||||||||||| ||||    
T  42799250 ttaagcctattgtgattagtagaattatttatttgctttaacaaaaactaatgaagaattgctccttttgatgtgttgataatattgtctttgtccaata 42799349  T
Q  181 tggtccac 188  Q
    ||||||||    
T  42799350 tggtccac 42799357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 28989426 - 28989298
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||||||||||||||||  ||||||||| |||||||| ||||||| ||||||   ||||||||| || ||||||||||||     |||||||||||||||    
T  28989426 tatactactccctccgg--tcttatttacaagagaaagttgacttattagatacattgaataatgtacgtatctagtcaagaatctaaaccaaatacata 28989329  T
Q  283 aattatttgatgtatctaaaaagtaaattgt 313  Q
    |||||||| ||||||||||||||||||||||    
T  28989328 aattatttaatgtatctaaaaagtaaattgt 28989298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 26545136 - 26545023
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    ||||||||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||| ||||    
T  26545136 ggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgaatct 26545037  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  26545036 aaaaagtaaattgt 26545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 28359080 - 28359193
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| |||| |||||||||   ||||||||||||||||||||||||| ||     |||||||||||||||||||| ||||||||    
T  28359080 ggtcctatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaaccaaaaccaaatacataaattatttaatgtatct 28359179  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  28359180 aaaaagtaaattgt 28359193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 315
Target Start/End: Complemental strand, 38830637 - 38830507
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||||||||||||||||  || |||||| |||||| | ||||||||||| ||   |||||||||||||||||||||||||     |||||||||||||||    
T  38830637 tatactactccctccgg--tcctatttacaagagacagttgactttttaaatacattgaataatatatgtatctagtcaagaacctaaaccaaatacata 38830540  T
Q  283 aattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||  ||||||||||||||||||||||||    
T  38830539 aattattcaatgtatctaaaaagtaaattgtct 38830507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 10380399 - 10380514
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||||||   || |||||| ||||||||||||||      ||||||||||||||||||||||| ||||||||    
T  10380399 ggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatct 10380498  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  10380499 aaaaagtaaattgtct 10380514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 14281740 - 14281614
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||| || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  14281740 tactccctccggg-tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 14281642  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  14281641 ttcaatgtatctaaaaagtaaattgtct 14281614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 40161182 - 40161297
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||| ||   ||||||||| |||||||| ||||||     ||||||||||||||||||||||| ||||||||    
T  40161182 ggtcatatttacaagagaaaattgactttttaaatacattgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatct 40161281  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  40161282 aaaaagtaaattgtct 40161297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 2352458 - 2352333
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  2352458 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 2352361  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| || |||||||||||||||||||||    
T  2352360 tttaatatatctaaaaagtaaattgtct 2352333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 2961103 - 2961228
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   || |||||| ||||||||||||||      ||||||||||||||||||||    
T  2961103 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaatta 2961200  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  2961201 tttaatgtatctaaaaagtaaattgtct 2961228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 311
Target Start/End: Original strand, 45536162 - 45536283
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  | ||||||| |||||||||||||||||||||||   || |||||| ||| |||| ||||||     ||||||||||||||||||||    
T  45536162 tactccctccgg--ttttatttacaagagaaaattgactttttagatacattcaataatgtatttatcaagtcaagaacctaaaccaaatacataaatta 45536259  T
Q  288 tttgatgtatctaaaaagtaaatt 311  Q
    ||||||||||||||||||||||||    
T  45536260 tttgatgtatctaaaaagtaaatt 45536283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 7796086 - 7796213
Alignment:
Q  193 tactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaa 284  Q
    |||||||||||||||  || |||||| |||||||||| | ||||||||||   ||||||||| ||||||| |||||||     |||||||||||||||||    
T  7796086 tactactccctccgg--tcctatttacaagagaaaatagtctttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaa 7796183  T
Q  285 ttatttgatgtatctaaaaagtaaattgtc 314  Q
    |||||| ||||||||||||| |||||||||    
T  7796184 ttatttaatgtatctaaaaaataaattgtc 7796213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 10065254 - 10065377
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| ||||||||||||| |||||||||   ||||||||| ||||||||| |||||     |||| |||||||||||||||    
T  10065254 tactccctccgg--tcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctcgtcaagaacctaaatcaaatacataaatta 10065351  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  10065352 tttaatgtatctaaaaagtaaattgt 10065377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 9301918 - 9302043
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | || |||||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||    
T  9301918 tactccctccgg--tcctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 9302015  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  9302016 tttaatgtatctaaaaagtaaattgtct 9302043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 23398229 - 23398104
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| || ||| ||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  23398229 tactccctccgg--tcctatttacaatagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 23398132  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||| ||||||    
T  23398131 ttcaatgtatctaaaaagtaagttgtct 23398104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 24594933 - 24595042
Alignment:
Q  213 tatttataagagaaaattgactttttagat--ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaag 305  Q
    ||||||||| | ||| ||||||||||||||  |||||| || |||||||||||||||     ||||||||||| ||||||||||| ||||||||||||||    
T  24594933 tatttataaaataaagttgactttttagatcattgaattatgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaaag 24595032  T
Q  306 taaattgtct 315  Q
    ||||||||||    
T  24595033 taaattgtct 24595042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 1673981 - 1674096
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| |||||||| |||||   || |||||||||||||| |||||||     ||||||||||||||||||||||| ||||||||    
T  1673981 ggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatct 1674080  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  1674081 aaaaaataaattgtct 1674096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 15289912 - 15289797
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatct 299  Q
    ||||||||||| |||||||| ||||||||||||||   ||||||||| |||||| |||||||||||     |||||||| ||||||||||| ||||||||    
T  15289912 ggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtacctagtcaataacctaaaccaaatatataaattatttaatgtatct 15289813  T
Q  300 aaaaagtaaattgtct 315  Q
    |||||  |||||||||    
T  15289812 aaaaaagaaattgtct 15289797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 33325472 - 33325357
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||| ||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||| ||||||||||||||| ||||||||    
T  33325472 ggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccagatacataaattatttaatgtatct 33325373  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  33325372 aaaaaataaattgtct 33325357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 9548821 - 9548698
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   ||||| ||| | |||||||| ||||     |||| |||||||||||||||    
T  9548821 tactccctccgg--tcctatttacaagagaaaattgactttttagatacattgaagaatgtgtgtatctaatcaagaacctaaatcaaatacataaatta 9548724  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  9548723 tttaatgtatctaaaaagtaaattgt 9548698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 26550301 - 26550411
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||| ||     |||| |||||||||||||||||| |||| ||||||||    
T  26550301 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaagcaaatacataaattatttaatgtttctaaaaa 26550400  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  26550401 gtaaattgtct 26550411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 42799200 - 42799252
Alignment:
Q  13 aatatattatatagaaagaaatgtgtaatgcactaatgctacacatgcaatta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42799200 aatatattatatagaaagaaatgtgtaatgcactaatgctacatatgcaatta 42799252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 29312578 - 29312463
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| || ||||| ||||||||||| ||   ||||||||| || ||||||||||||     |||| |||||||||||||||||| ||||||||    
T  29312578 ggtcctatttacaacagaaagttgactttttaaatacattgaataatgtacgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatct 29312479  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  29312478 aaaaagtaaattgtct 29312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 26733924 - 26733811
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagatt---tgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| |||||||| |||||    | |||||| |||||||||||||||     ||||||||||||||| ||||||| ||||||||    
T  26733924 ggtcctatttataagagaaagttgactttatagataaaataaataatttatgtatctagtcaagaatataaaccaaatacatagattatttaatgtatct 26733825  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||| ||||||    
T  26733824 aaaaagttaattgt 26733811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 34719033 - 34718915
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagatttgaataatatatgtatctagtcaa-----taaaccaaatacataaattattt 290  Q
    ||||||||||||  || |||||| || ||||| || |||||||||||    ||||| || ||||||||||||     |||||||||||||||||||||||    
T  34719033 tactccctccgg--tcctatttacaaaagaaagttaactttttagat----ataatgtacgtatctagtcaaaaatctaaaccaaatacataaattattt 34718940  T
Q  291 gatgtatctaaaaagtaaattgtct 315  Q
     ||||||||||||| ||||||||||    
T  34718939 aatgtatctaaaaattaaattgtct 34718915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 6784798 - 6784685
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaac-----caaatacataaattatttgatgtatct 299  Q
    |||| ||||||||| ||||| |||| |||||||||   ||||||||| |||||||||| |||| || |     |||||| ||||||||||| ||||||||    
T  6784798 ggtcctatttataatagaaagttgattttttagatacattgaataatgtatgtatctaatcaagaacctgaatcaaatatataaattatttaatgtatct 6784699  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  6784698 aaaaagtaaattgt 6784685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 30264821 - 30264891
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaa 308  Q
    |||||||||||||||||||||||||     ||||||||||| ||||||||||| || ||||||||||||||    
T  30264821 ttgaataatatatgtatctagtcaagaacctaaaccaaatatataaattatttaatatatctaaaaagtaa 30264891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 23537398 - 23537445
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||||||||||||||||| || |||||||||| ||||||||||    
T  23537398 taaaccaaatacataaattatttaatttatctaaaaaataaattgtct 23537445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 24463361 - 24463314
Alignment:
Q  267 ataaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||||||| ||||||||||| || |||||||||| ||||||||||    
T  24463361 ataaaccaaatatataaattatttaatatatctaaaaa-taaattgtct 24463314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 26070823 - 26070868
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagatt 243  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||||||    
T  26070823 tactccctccgg--tcttatttataagtgaaatttgactttttagatt 26070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 315
Target Start/End: Complemental strand, 39378163 - 39377860
Alignment:
Q  13 aatatattatatagaaagaaatgtgtaatgcactaatgctacacatgcaattatgtataattaaatatgaaagatgttaagcctattgtgattagtagaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39378163 aatatattatatagaaagaaatgtgtaatgcactaatgctacatatgcaattatgtataattaaatatgaaagatgttaagcctattgtgattagtagaa 39378064  T
Q  113 ttatttatttactttcacaaaaactaatgaagaattgctcctattgataatattgtctttgtctaatatggtccactgtatactactccctccggggtct 212  Q
    || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| | |||  ||||     
T  39378063 ttgtttatttactttcacaaaaactaatgaagaattgctactgttgataatattgtctttgtctaatatggtctactgtatactacttcttcc--ggtcc 39377966  T
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaaccaaatacataaattatttgatgtatctaaaaagtaaa 309  Q
    |||||| |||||| |||| |||||||||||   |  |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39377965 tatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtcaataaaccaaatacataaattatttgatgtatctaaaaagtaaa 39377866  T
Q  310 ttgtct 315  Q
    ||||||    
T  39377865 ttgtct 39377860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 20427140 - 20427025
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||     |||| |||||||||||||||||| || |||||    
T  20427140 ggtcttatttataagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatctatct 20427041  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  20427040 aaaaagtaaattgtct 20427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 40430680 - 40430790
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||||||||||||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  40430680 tatttataagagaaaattgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 40430779  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  40430780 gtaaattgtct 40430790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 44737282 - 44737406
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaata----aaccaaatacataaattat 288  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||||||| |||||||||||| || |    |||||||||||||||||||    
T  44737282 tactccctccgg--tcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaatctaaccaaatacataaattat 44737379  T
Q  289 ttgatgtatctaaaaagtaaattgtct 315  Q
    |  ||||||||||||||||||||||||    
T  44737380 tcaatgtatctaaaaagtaaattgtct 44737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 11363009 - 11363122
Alignment:
Q  210 tcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaa 301  Q
    ||||||||| |||||||| ||||||||||||||   ||||||||| ||| |||||||||||     ||||||||||||||||||||||| ||||||||||    
T  11363009 tcttatttacaagagaaagttgactttttagatgcattgaataatgtatctatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 11363108  T
Q  302 aaagtaaattgtct 315  Q
    ||||||||||||||    
T  11363109 aaagtaaattgtct 11363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 16241262 - 16241391
Alignment:
Q  192 atactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataa 283  Q
    ||||||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||    
T  16241262 atactactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataa 16241359  T
Q  284 attatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||  ||||||||||||||||||||||||    
T  16241360 attattcaatgtatctaaaaagtaaattgtct 16241391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 43657937 - 43658045
Alignment:
Q  211 cttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaa 302  Q
    |||||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||    
T  43657937 cttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaa 43658036  T
Q  303 aagtaaatt 311  Q
    |||||||||    
T  43658037 aagtaaatt 43658045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 25891958 - 25892068
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  |||||||||||||    
T  25891958 tatttataagagacagttgactttttagataaattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaa 25892057  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  25892058 gtaaattgtct 25892068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 32881041 - 32880931
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||| ||| ||||||||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| |||||| ||||||    
T  32881041 tatttacaagataaagttgactttttagatatattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 32880942  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  32880941 gtaaattgtct 32880931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 42263469 - 42263592
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||||| |||| |||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||    
T  42263469 tactccctccgg--tcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 42263566  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  42263567 tttaatgtatctaaaaagtaaattgt 42263592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 191 - 315
Target Start/End: Complemental strand, 29866236 - 29866106
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||| ||||||||||||  || |||||| |||| ||| |||||||||||| |   ||||||||| |||||||||||||||     |||||||||||||||    
T  29866236 tataatactccctccgg--tcctatttacaagataaagttgactttttaggtacattgaataatgtatgtatctagtcaagaacctaaaccaaatacata 29866139  T
Q  283 aattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||| ||||||||||||||||||||||||    
T  29866138 aattatttaatgtatctaaaaagtaaattgtct 29866106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 6761614 - 6761489
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  6761614 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaatta 6761517  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  6761516 ttcaatgtatctaaaaagtaaattgtct 6761489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 7765793 - 7765918
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     |||| ||||||||||| |||    
T  7765793 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataattta 7765890  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  7765891 tttaatgtatctaaaaagtaaattgtct 7765918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 13775860 - 13775739
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||||| ||||||||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||    
T  13775860 tactccctccgg--tcctatttataagagaaagttgactttttagatacattaaataatgtatgtatctagtcaaaaacctaaaccaaatacataaatta 13775763  T
Q  288 tttgatgtatctaaaaagtaaatt 311  Q
    ||| || |||||||||||||||||    
T  13775762 tttaatatatctaaaaagtaaatt 13775739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 30864722 - 30864799
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30864722 ttgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtct 30864799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 32197515 - 32197402
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| |||| |||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  32197515 ggtcctatttacaagagaaagttgattttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatct 32197416  T
Q  300 aaaaagtaaattgt 313  Q
    ||||| ||||||||    
T  32197415 aaaaaataaattgt 32197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 2100151 - 2100052
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||| ||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  2100151 tatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2100052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 41260164 - 41260049
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| | ||||||||| ||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||     
T  41260164 ggtcctatttacaagagaaagtcgactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatca 41260065  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  41260064 aaaaagtaaattgtct 41260049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 42341757 - 42341642
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| ||||||||||||| |||||| ||   ||||||||| |||||||||| ||||     ||||||||||||||||||||||| |||||| |    
T  42341757 ggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtattt 42341658  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  42341657 aaaaagtaaattgtct 42341642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 45065594 - 45065704
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||| ||||| ||||||||||||||   ||||||||| ||||||||||||| |     ||||  ||||||||||||||||| |||||||||||||    
T  45065594 tatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtctagaatctaaattaaatacataaattatttaatgtatctaaaaa 45065693  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  45065694 gtaaattgtct 45065704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 32750341 - 32750459
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     |||| |||||||||||||||    
T  32750341 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaatcaaatacataaatta 32750438  T
Q  288 tttgatgtatctaaaaagtaa 308  Q
    | | |||||||||||||||||    
T  32750439 tgtaatgtatctaaaaagtaa 32750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 11711348 - 11711448
Alignment:
Q  223 agaaaattgactttttagat---ttgaataatatatgtatctagtcaataaac-----caaatacataaattatttgatgtatctaaaaagtaaattgtc 314  Q
    ||||||||||||||||||||   ||||||||| ||||||||||||||| || |     |||||||||||||||||| |||||||| ||||||||||||||    
T  11711348 agaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaagtcaaatacataaattatttaatgtatcttaaaagtaaattgtc 11711447  T
Q  315 t 315  Q
    |    
T  11711448 t 11711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 18452707 - 18452593
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttag-at-ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatcta 300  Q
    |||| |||||| |||||| | |||||||||||  || ||||||||| |||||||||||||||     ||||||||||||||||||||||  |||||||||    
T  18452707 ggtcctatttacaagagacagttgactttttaatatattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatcta 18452608  T
Q  301 aaaagtaaattgtct 315  Q
    |||||||||||||||    
T  18452607 aaaagtaaattgtct 18452593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 41205499 - 41205603
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtca-----ataaaccaaatacataaattatttgatgtatct 299  Q
    |||||||||||||||||||| |||| |||||||||   ||||||||| |||||||||||| |     |||||||||||||||||||||||| || |||||    
T  41205499 ggtcttatttataagagaaagttgattttttagatatattgaataatttatgtatctagtaaaaaatataaaccaaatacataaattatttaatatatct 41205598  T
Q  300 aaaaa 304  Q
    |||||    
T  41205599 aaaaa 41205603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 38598595 - 38598480
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| || ||||| || |||||||||||   ||||||||||||||||||| |||||     ||||||||||||||||||||||| || ||| |    
T  38598595 ggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggtcaagaacctaaaccaaatacataaattatttaatatatat 38598496  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  38598495 aaaaagtaaattgtct 38598480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 39377835 - 39377955
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaaccaaatacataaattatttga 292  Q
    ||||||||||||  || |||||| |||||| |||| |||||||||||   |  |||||| ||||||| | ||  ||  ||||||||||||||||||||||    
T  39377835 tactccctccgg--tcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttattgaccaaatacataaattatttga 39377932  T
Q  293 tgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||||||    
T  39377933 tgtatctaaaaagtaaattgtct 39377955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 1944548 - 1944658
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| || ||||| ||||||||||||||   ||||||||| |||||||||||||||     |||||||||| |||| ||||||| |||||||||||||    
T  1944548 tatttacaaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaattcatatattatttaatgtatctaaaaa 1944647  T
Q  305 gtaaattgtct 315  Q
    |||| ||||||    
T  1944648 gtaacttgtct 1944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 20360578 - 20360521
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa 267  Q
    ||||||||||||||| ||||||||||||||   ||||||||| |||||||||||||||    
T  20360578 tatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaa 20360521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 3265052 - 3264946
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaaccaaat-acataaattatttgatgtatctaaaaagtaa 308  Q
    ||||||||||| ||  |||| |||||||||   ||||||||| ||||||| ||||||| ||   |||  | ||||||||||| |||||||||||||||||    
T  3265052 tatttataagataatgttgattttttagatacattgaataatgtatgtatttagtcaagaacttaaaccaaataaattatttaatgtatctaaaaagtaa 3264953  T
Q  309 attgtct 315  Q
    |||||||    
T  3264952 attgtct 3264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 27596729 - 27596773
Alignment:
Q  271 accaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||||    
T  27596729 accaaatacataaattattcaatgtatctaaaaagtcaatcgtct 27596773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 12763378 - 12763253
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  12763378 tactccctccgg--tcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 12763281  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  12763280 tttaatgtatctaaaaagtaaattgtct 12763253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 3411466 - 3411356
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||| ||||||||||||||   ||||||||| |||||| ||||||||     ||||||||||||||||||||||| |||||||||||||    
T  3411466 tatttataagagaaatttgactttttagatacattgaataatgtatgtacctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 3411367  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  3411366 gtaaattgtct 3411356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 23248667 - 23248792
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||| ||| ||||||||||||||   ||||||||||||||||| |||||||     ||||||||||||||||||||    
T  23248667 tactccctccgg--tcctatttacaagataaagttgactttttagatacattgaataatatatgtatttagtcaagaacctaaaccaaatacataaatta 23248764  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  23248765 tttaatgtatctaaaaagtaaattgtct 23248792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 30866394 - 30866269
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||| |||| |||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||    
T  30866394 tactccctccgg--tcttatttacaagagaaagttgattttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 30866297  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  30866296 tttaatgtatctaaaaagtaaattgtct 30866269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 5347722 - 5347846
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||||| ||||||||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||    
T  5347722 tactccctccgg--tcctatttataagagaaagttgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 5347819  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| |||||||| |||||||||||||||    
T  5347820 tttaatgtatct-aaaagtaaattgtct 5347846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 12426529 - 12426654
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  |||||||||||||||||| || | |||||||||   ||||||||| |||||||||||||||     |||||||||||| |||||||    
T  12426529 tactccctccgg--tcttatttataagagaaagttaattttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacgtaaatta 12426626  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| |||||||||||||||||| |||||    
T  12426627 tttaatgtatctaaaaagtaaactgtct 12426654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 20397964 - 20397839
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||| ||||||||||||||    
T  20397964 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaatta 20397867  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||| ||||||||||    
T  20397866 tttaatgtatctaaaaattaaattgtct 20397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 34281668 - 34281793
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||| ||   ||||||||| ||||||| |||||||     ||||||||||||||||||||    
T  34281668 tactccctccgg--tcctatttacaagagaaagttgactttttacatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 34281765  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  34281766 tttaatgtatctaaaaagtaaattgtct 34281793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 7107769 - 7107654
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  7107769 ggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtatctagtcaaaaatctaaaccaaatacataaattatttaatgtatct 7107670  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| | ||||||||    
T  7107669 aaaaaattaattgtct 7107654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 29770461 - 29770346
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||  ||| ||||||||||||||   |||||||||  ||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  29770461 ggtcctatttataagttaaagttgactttttagatacattgaataatgcatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 29770362  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  29770361 aaaaagtaaattgtct 29770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 32050094 - 32050204
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||||||||||||||||| |||||||||   ||||||||| |||||||||| |||| ||     |||||||||||||||||||| || ||||||||||    
T  32050094 tatttataagagaaaattgattttttagatatattgaataatgtatgtatctactcaagaacctacaccaaatacataaattatttaatatatctaaaaa 32050193  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  32050194 gtaaattgtct 32050204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 5909480 - 5909595
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||| ||||||||   || |||||| ||| ||| |||||||     ||||||||||||||||||||||| ||||||||    
T  5909480 ggtcctatttacaagagaaaattgaccttttagatacattcaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatct 5909579  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  5909580 aaaaagtaaattgtct 5909595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 7463589 - 7463475
Alignment:
Q  208 ggtcttatttataagagaaaattgacttttt-agat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatc 298  Q
    |||| |||||||||||||||||||||||||| ||||   ||||||||| |||||||||| ||||     ||||||||||||||||||||| | ||||||     
T  7463589 ggtcctatttataagagaaaattgacttttttagatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatgtaatgtatt 7463490  T
Q  299 taaaaagtaaattgt 313  Q
    |||||||||||||||    
T  7463489 taaaaagtaaattgt 7463475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 19979507 - 19979616
Alignment:
Q  213 tatttataagagaaaattgacttttt-agat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaa 303  Q
    ||||||||||||||| || ||||||| ||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||||||||||||    
T  19979507 tatttataagagaaagttaacttttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaa 19979606  T
Q  304 agtaaattgt 313  Q
    ||||||||||    
T  19979607 agtaaattgt 19979616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 35427658 - 35427783
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtca-----ataaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||| ||||||||  ||||| ||   || |||||| ||||||| ||||||     |||||||||||||||||||||    
T  35427658 tactccctccgg--tcctatttataagataaaattgatcttttaaatacattcaataatgtatgtatatagtcaaaaacataaaccaaatacataaatta 35427755  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  35427756 tttaatgtatctaaaaagtaaattgtct 35427783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 10599324 - 10599440
Alignment:
Q  208 ggtcttatttataagagaaaattgacttttt-agat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatc 298  Q
    |||| |||||| |||| ||| |||||||||| ||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  |||||||    
T  10599324 ggtcctatttacaagataaagttgacttttttagatacattgaataatgtatgtatctagtcaaacacctaaaccaaatacataaattattgtatgtatc 10599423  T
Q  299 taaaaagtaaattgtct 315  Q
    |||||| ||||||||||    
T  10599424 taaaaaataaattgtct 10599440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 12085033 - 12085148
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| ||||||||||||||| |||||||   ||||||||| |||||||  | ||||     |||| |||||||||||||||||| ||||||||    
T  12085033 ggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtattaaatcaagaacctaaatcaaatacataaattatttaatgtatct 12085132  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| |||| |||||    
T  12085133 aaaaaataaactgtct 12085148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 46680855 - 46680951
Alignment:
Q  225 aaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 313  Q
    |||||||||||||||||    ||||| ||| ||| |||||||||||     |||| |||||| ||||||||||| ||||||||||||||||||||||    
T  46680855 aaaattgactttttagacacattgaagaatgtatatatctagtcaagaacttaaatcaaatatataaattatttaatgtatctaaaaagtaaattgt 46680951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 13807237 - 13807286
Alignment:
Q  192 atactactccctccggggtcttatttataagagaaaattgactttttagatt 243  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||||||    
T  13807237 atactactccctccgg--tcttatttataagaaaaagttgactttttagatt 13807286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 36655494 - 36655434
Alignment:
Q  212 ttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaata 269  Q
    ||||||| ||||||||||||| |||||||||   ||||| ||| |||||||||||||||||    
T  36655494 ttatttacaagagaaaattgaatttttagatacattgaacaatgtatgtatctagtcaata 36655434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 15074716 - 15074659
Alignment:
Q  245 gaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtat 297  Q
    ||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||    
T  15074716 gaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtat 15074659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 48082807 - 48082843
Alignment:
Q  207 gggtcttatttataagagaaaattgactttttagatt 243  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  48082807 gggtcttatttataagaaaaagttgactttttagatt 48082843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 7405593 - 7405468
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  7405593 tactccctccgg--tcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 7405496  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  7405495 tttaatgtatctaaaaagtaaattgtct 7405468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 24949630 - 24949755
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  24949630 tactccctccgg--tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaatta 24949727  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  24949728 tttaatgtatctaaaaagtaaattgtct 24949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 191 - 315
Target Start/End: Original strand, 17225237 - 17225367
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||||||||||||||||  ||||||||| ||| |||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||| |||    
T  17225237 tatactactccctccgg--tcttatttacaagtgaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatatata 17225334  T
Q  283 aattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||| ||||||||||||||||||||||||    
T  17225335 aattatttaatgtatctaaaaagtaaattgtct 17225367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 31971029 - 31971154
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  31971029 tactccctccgg--tcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 31971126  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| |||||||||||| |||||||||||    
T  31971127 tttaatgtatctaaaatgtaaattgtct 31971154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 30686678 - 30686568
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||| ||   ||||||||| |||||||||||||||     ||||| ||||||||||||||||| |||||||||||||    
T  30686678 tatttacaagagaaaattgactttttaaatacattgaataatgtatgtatctagtcaaaaacctaaacgaaatacataaattatttaatgtatctaaaaa 30686579  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  30686578 gtaaattgtct 30686568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 390820 - 390929
Alignment:
Q  214 atttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaag 305  Q
    |||||||||| ||| |||| |||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||||||||    
T  390820 atttataagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaag 390919  T
Q  306 taaattgtct 315  Q
    ||||||||||    
T  390920 taaattgtct 390929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 311
Target Start/End: Original strand, 885601 - 885722
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  885601 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 885698  T
Q  288 tttgatgtatctaaaaagtaaatt 311  Q
    ||| ||||||||||||||||||||    
T  885699 tttaatgtatctaaaaagtaaatt 885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 33859639 - 33859514
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| || |||||||||||   | ||||||| |||||||||||||||     ||||||||||||||||||||    
T  33859639 tactccctccgg--tcctatttacaagagaaagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaatta 33859542  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  33859541 tttaatgtatctaaaaagtaaattgtct 33859514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 6045690 - 6045805
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| ||||| ||||||||   ||||||||| |||||||||||||||     |||| |||||||||||||||||| || |||||    
T  6045690 ggtcctatttataagagaaagttgaccttttagatacattgaataatctatgtatctagtcaagaatctaaatcaaatacataaattatttaatctatct 6045789  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  6045790 aaaaagtaaattgtct 6045805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 14931402 - 14931282
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaaccaaatacataaattatttga 292  Q
    ||||||||||||  || |||||| |||||| ||||||||||||||||   ||||||||| |||||||| |     ||||||||||||||||||||||| |    
T  14931402 tactccctccgg--tcatatttacaagagacaattgactttttagatacattgaataatgtatgtatcaaaaacctaaaccaaatacataaattatttaa 14931305  T
Q  293 tgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||||||    
T  14931304 tgtatctaaaaagtaaattgtct 14931282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 8558928 - 8559037
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||||||   ||||||||| |||||||||||| ||     ||||||||||||||||||||||| |||||||||||||    
T  8558928 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattattt-atgtatctaaaaa 8559026  T
Q  305 gtaaattgtct 315  Q
     ||||||||||    
T  8559027 ataaattgtct 8559037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 311
Target Start/End: Original strand, 6047795 - 6047916
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| || ||||| || |||||||||||   ||||||||| |||||||||||||||     |||| |||||||||||||||    
T  6047795 tactccctccgg--tcctatttacaacagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatta 6047892  T
Q  288 tttgatgtatctaaaaagtaaatt 311  Q
    ||| ||||||||||||||||||||    
T  6047893 tttaatgtatctaaaaagtaaatt 6047916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 766441 - 766547
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||| | || |||||||||   ||||||||| ||||||| ||||||||||     |||||||||||||||||||| |||||||||||||    
T  766441 tatttataagagaaagtcgattttttagatacattgaataatgtatgtatttagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaa 766540  T
Q  305 gtaaatt 311  Q
     ||||||    
T  766541 ataaatt 766547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 6801598 - 6801673
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 313  Q
    ||||||||| |||||||||||||||     |||||||||||||| |||||||| ||||||||||||||||||||||    
T  6801598 ttgaataatgtatgtatctagtcaagaacctaaaccaaatacatgaattatttaatgtatctaaaaagtaaattgt 6801673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 34639054 - 34639164
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||| | ||||||||||||||   |  |||||| |||||||||||||||     ||||||||||||||||||| ||  |||||||||||||    
T  34639054 tatttacaagagacagttgactttttagatacatgcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatttttcaatgtatctaaaaa 34639153  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  34639154 gtaaattgtct 34639164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 22898924 - 22898877
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  22898924 taaaccaaatatataaattattcaatgtatctaaaaagtaaattgtct 22898877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 2972173 - 2972209
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagattt 244  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2972173 ggtcttatttataagagaaatttgactttttagattt 2972209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 13144286 - 13144326
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaa 308  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  13144286 taaacaaaatacataaattatttaatgtatctaaaaagtaa 13144326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 22880989 - 22880942
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  22880989 taaactaaatatataaattattcaatgtatctaaaaagtaaattgtct 22880942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 36363 - 36429
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||| ||| |||||||||||     ||||||||||||||||||||||| || ||||||||||    
T  36363 ttgaataatttatatatctagtcaaaaatctaaaccaaatacataaattatttaatatatctaaaaa 36429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 9601602 - 9601717
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||    
T  9601602 ggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccaaatacataaattatttgatgtatct 9601701  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  9601702 aaaaagtaaattgtct 9601717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 23411314 - 23411191
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||    
T  23411314 tactccctccgg--tcttatttacaagagaaaattgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaatta 23411217  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||| ||||    
T  23411216 tttaatgtatctaaaaagtaatttgt 23411191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 41046965 - 41046852
Alignment:
Q  210 tcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaa 301  Q
    |||||||||||||||||| |||| |||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||    
T  41046965 tcttatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaa 41046866  T
Q  302 aaagtaaattgtct 315  Q
    |||||| |||||||    
T  41046865 aaagtagattgtct 41046852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 20578669 - 20578779
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||     |||||||||||||||||||| |||||| ||||||    
T  20578669 tatttataagagaaagttgactttttagatacattgaataatatatctatctagtcaataacctaaaccaaatacataaattatttaatgtatataaaaa 20578768  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  20578769 gtaaattgtct 20578779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 41989698 - 41989588
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  41989698 tatttaaaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 41989599  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  41989598 gtaaattgtct 41989588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 7750057 - 7749942
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  7750057 ggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatct 7749958  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  7749957 aaaaattaaattgtct 7749942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 903965 - 904088
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| | |||||||||||||     ||||||||||||||||||||    
T  903965 tactccctccgg--tcctatttacaagagaaagttgactttttagatatattgaataatgtgtgtatctagtcaagaacctaaaccaaatacataaatta 904062  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  904063 tttaatgtatctaaaaagtaaattgt 904088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 6338329 - 6338439
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||||||||| || ||||||||||||||   ||||||||| |||||||||| ||||     ||||||||||||||||||||||| |||||||||||||    
T  6338329 tatttataagaggaagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 6338428  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  6338429 gtaaattgtct 6338439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 31802957 - 31803080
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| ||| ||||||||||||||     |||||||||||||||||    
T  31802957 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatatatctagtcaataacctaaaccaaatacataaatta 31803054  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  31803055 tttaatgtatctaaaaagtaaattgt 31803080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 13145029 - 13144904
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | |||| |||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  13145029 tactccctccgg--tcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 13144932  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  13144931 tttaatgtatctaaaaagtaaattgtct 13144904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 26898340 - 26898215
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||    
T  26898340 tactccctccgg--tcctatttacaagagaaagttgactttttagatgcattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 26898243  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| |||||| |||||||||||||||||    
T  26898242 tttaatgtatttaaaaagtaaattgtct 26898215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 37699779 - 37699904
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  37699779 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 37699876  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  37699877 ttcaatgtatctaaaaagtaaattgtct 37699904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 21090385 - 21090500
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| ||||||||||| |||||||||||   ||||||||| |||||||||||||||     ||||||||||||||| ||||||| |||||| |    
T  21090385 ggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacatacattatttaatgtattt 21090484  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  21090485 aaaaagtaaattgtct 21090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 313
Target Start/End: Original strand, 36417041 - 36417169
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||| ||||||||||||  || |||||| |||||||| ||||||||||| ||   ||||||||| |||||||||||||||     ||| |||||||||||    
T  36417041 tataatactccctccgg--tcctatttacaagagaaatttgactttttaaatacattgaataatgtatgtatctagtcaagaacctaatccaaatacata 36417138  T
Q  283 aattatttgatgtatctaaaaagtaaattgt 313  Q
    |||||||| ||||||||||||||||||||||    
T  36417139 aattatttaatgtatctaaaaagtaaattgt 36417169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 15569345 - 15569455
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||||||| ||| |||||| ||||     ||||||||||||||||||||||| |||||||||||||    
T  15569345 tatttacaagagaaagttgactttttagatacattgaataatgtatatatctaatcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 15569444  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  15569445 gtaaattgtct 15569455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 18353222 - 18353330
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| |||| |||||| ||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  18353222 tatttacaagagaaagttgattttttacatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 18353321  T
Q  305 gtaaattgt 313  Q
    |||||||||    
T  18353322 gtaaattgt 18353330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 25027843 - 25027718
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| ||| |||||||||||     ||||||||||||||||||||    
T  25027843 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaatta 25027746  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  25027745 ttcaatgtatctaaaaagtaaattgtct 25027718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 29374319 - 29374194
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| ||||||||| |||||     ||||||||||||||||||||    
T  29374319 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctcgtcaagaacctaaaccaaatacataaatta 29374222  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  29374221 ttcaatgtatctaaaaagtaaattgtct 29374194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 2825994 - 2825895
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||||||   ||||||||| |||||||||||| ||     ||||||||||||||||||||||| |||||||||||||    
T  2825994 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2825895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 42311819 - 42311934
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||| ||||||||||||||| ||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||||||||    
T  42311819 ggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtatttagtcaaaaacttaaaccaaatacataaattatttaatgtatct 42311918  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  42311919 aaaaaataaattgtct 42311934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 2959248 - 2959361
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||||||   ||||| ||| ||| |||||||||||     |||| |||||||||| ||||||| ||||||||    
T  2959248 ggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatct 2959347  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  2959348 aaaaagtaaattgt 2959361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 2967717 - 2967830
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||||||   ||||| ||| ||| |||||||||||     |||| |||||||||| ||||||| ||||||||    
T  2967717 ggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatct 2967816  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  2967817 aaaaagtaaattgt 2967830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 1643493 - 1643368
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||| | ||||||||||||||   || |||||| |||||||||||||||     |||| ||||||||||||||     
T  1643493 tactccctccgg--tcctatttataagagacagttgactttttagatacattcaataatgtatgtatctagtcaagaatctaaatcaaatacataaattt 1643396  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  1643395 ttcaatgtatctaaaaagtaaattgtct 1643368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 7053796 - 7053672
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||  ||||||||||| ||   ||||||||| |||||||||||||||     |||| |||||||||||||||    
T  7053796 tactccctccgg--tcctatttacaagagaag-ttgactttttaaatacattgaataatgtatgtatctagtcaagagcctaaatcaaatacataaatta 7053700  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  7053699 tttaatgtatctaaaaagtaaattgtct 7053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 36418984 - 36419109
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||| ||| |||| ||||| |||   ||||||||| |||||||||||||||     ||||| ||||||||||||||    
T  36418984 tactccctccgg--tcctatttacaagataaagttgatttttttgatacattgaataatgtatgtatctagtcaagaacctaaactaaatacataaatta 36419081  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  36419082 ttttatgtatctaaaaagtaaattgtct 36419109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 1108384 - 1108307
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||| |||||||||||||||     ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  1108384 ttgaataatgtatgtatctagtcaagaacctaaactaaatacataaattattttatgtatctaaaaagtaaattgtct 1108307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 7945969 - 7945863
Alignment:
Q  215 tttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagt 306  Q
    |||| ||||||||  | |||||||||||   ||||||||| |||||||||||||||     ||||||||||| ||||||||||| |||||||||||||||    
T  7945969 tttacaagagaaagatcactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatatataaattatttaatgtatctaaaaagt 7945870  T
Q  307 aaattgt 313  Q
    |||||||    
T  7945869 aaattgt 7945863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 41815324 - 41815211
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| || |||| ||||||| ||     |||||||||||||||||||| |||||| |    
T  41815324 ggtcctatttacaagagaaagttgactttttagatacattgaataatgtacgtatttagtcaagaacctgaaccaaatacataaattatttaatgtattt 41815225  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  41815224 aaaaagtaaattgt 41815211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 6910830 - 6910738
Alignment:
Q  229 ttgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 313  Q
    ||||||||||||||   ||||||||| |||| ||||||||||     |||| |||||||||||||||||| ||||||||||||| ||||||||    
T  6910830 ttgactttttagatatattgaataatgtatgcatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaaataaattgt 6910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 315
Target Start/End: Complemental strand, 14338947 - 14338839
Alignment:
Q  215 tttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagt 306  Q
    |||| |||||||| || |||||||||||   ||||||||| |||||||||| ||||     ||||||||||||||||||||||| || |||||||||| |    
T  14338947 tttacaagagaaatttaactttttagatacattgaataatttatgtatctattcaagaatttaaaccaaatacataaattatttaatttatctaaaaaat 14338848  T
Q  307 aaattgtct 315  Q
     ||||||||    
T  14338847 taattgtct 14338839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 21610315 - 21610423
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||| ||| || |||||||||||   ||||||||| ||| ||| |||||||     ||||||||||||||||||||||| |||||| ||||||    
T  21610315 tatttacaagataaagttaactttttagatacattgaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 21610414  T
Q  305 gtaaattgt 313  Q
    || ||||||    
T  21610415 gttaattgt 21610423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 16089134 - 16089200
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||| ||||||||||||||      ||||||||||||||||||||||| || ||||||||||    
T  16089134 ttgaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatatatctaaaaa 16089200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 3814120 - 3814075
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagatt 243  Q
    ||||||||||||  |||| ||||||||| |||||||||||||||||||    
T  3814120 tactccctccgg--tcttgtttataagaaaaaattgactttttagatt 3814075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 29019869 - 29019759
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||     
T  29019869 tatttacaagagaaaattgactttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaat 29019770  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  29019769 gtaaattgtct 29019759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 23825283 - 23825175
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  23825283 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttgatgtatctaaaaa 23825184  T
Q  305 gtaaattgt 313  Q
    |||||||||    
T  23825183 gtaaattgt 23825175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 8243691 - 8243806
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    ||||||||||| |||||| ||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  ||||||||    
T  8243691 ggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgtatct 8243790  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  8243791 aaaaagtaaattgtct 8243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 14768237 - 14768122
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| |||| |||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  14768237 ggtcctatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 14768138  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  14768137 aaaaagtaaattgtct 14768122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 335389 - 335497
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  335389 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 335488  T
Q  305 gtaaattgt 313  Q
    |||||||||    
T  335489 gtaaattgt 335497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 10049817 - 10049692
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| ||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  10049817 tactccctccgg--tcctatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 10049720  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  10049719 ttcaatgtatctaaaaagtaaattgtct 10049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 26999170 - 26999045
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  26999170 tactccctccgg--tcctatttacaagagacatttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 26999073  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  26999072 tttaatgtatctaaaaagtaaattgtct 26999045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 49123084 - 49122968
Alignment:
Q  207 gggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatc 298  Q
    ||||| |||||||| || ||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||    
T  49123084 gggtcctatttataggataaatttgactttttagatacattgaataatgtatgtatctagtcaagagcctaaaccaaatacataaattatttaatgtatc 49122985  T
Q  299 taaaaagtaaattgtct 315  Q
    |||||||||||||||||    
T  49122984 taaaaagtaaattgtct 49122968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 9190162 - 9190052
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||| ||||    
T  9190162 tatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatttaaaccaaatacataaattatttaatgtatcttaaaa 9190063  T
Q  305 gtaaattgtct 315  Q
    |||||| ||||    
T  9190062 gtaaatcgtct 9190052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 19202259 - 19202372
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||  |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  19202259 ggtcctatttacaagagaaagttgactttttagatacattgaataaggtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 19202358  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  19202359 aaaaagtaaattgt 19202372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 191 - 315
Target Start/End: Original strand, 51698108 - 51698238
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtca-----ataaaccaaatacata 282  Q
    |||| ||||||||||||  || |||||| |||||||| ||||||||||||||   || |||||| |||||||||||| |     ||||||||||||||||    
T  51698108 tataatactccctccgg--tcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtaatgaacataaaccaaatacata 51698205  T
Q  283 aattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||| ||||||||||||||||||||||||    
T  51698206 aattatttaatgtatctaaaaagtaaattgtct 51698238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 6086900 - 6087025
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  6086900 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 6086997  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  6086998 ttcaatgtatctaaaaagtaaattgtct 6087025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 28945805 - 28945680
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   || |||||| ||||| |||||| ||     ||||||||||||||||||||    
T  28945805 tactccctccgg--tcctatttacaagagaaaattgactttttagatatattcaataatgtatgtttctagttaagaacctaaaccaaatacataaatta 28945708  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  28945707 tttaatgtatctaaaaagtaaattgtct 28945680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 9440137 - 9440252
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  ||||||||    
T  9440137 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatct 9440236  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  9440237 aaaaagtaaattgtct 9440252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 9465080 - 9465195
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||| ||| ||||||||||||||   ||||||||| |||||||||||||||     |||| |||||||||||||||||| ||||||||    
T  9465080 ggtcctatttacaagataaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattattttatgtatct 9465179  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  9465180 aaaaagtaaattgtct 9465195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 25113358 - 25113473
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| ||||||||||||||   ||||||||| ||||||| || ||||     ||||||||||||||||||||||| |||||||     
T  25113358 ggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatttaatgtatcg 25113457  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  25113458 aaaaagtaaattgtct 25113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 28564944 - 28565059
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||| ||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||| ||||    
T  28564944 ggtcctatttacaagagaaaattgactttttatatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgcatct 28565043  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  28565044 aaaaaataaattgtct 28565059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 379212 - 379094
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa--------taaaccaaatacataaattatttgatgta 296  Q
    |||| ||||||||||||||| ||||||||||||||   ||||||||| |||||||||||||||        ||||||||||||||||||||||| |||||    
T  379212 ggtcctatttataagagaaagttgactttttagatacattgaataatttatgtatctagtcaagatcaatctaaaccaaatacataaattatttaatgta 379113  T
Q  297 tctaaaaagtaaattgtct 315  Q
    |||||||| | ||||||||    
T  379112 tctaaaaaattaattgtct 379094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 21653343 - 21653468
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| |||| |||||||||   ||||||||| ||| |||||||||||     |||||||||| |||||||||    
T  21653343 tactccctccgg--tcctatttacaagagaaatttgattttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatgcataaatta 21653440  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  21653441 tttaatgtatctaaaaagtaaattgtct 21653468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 40214899 - 40215024
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||| ||||| |||||||||||||||     |||| |||||||||||||||    
T  40214899 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattggataatgtatgtatctagtcaagaatctaaatcaaatacataaatta 40214996  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||| ||||||    
T  40214997 tttaatgtatctaaaaagtaacttgtct 40215024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 40464671 - 40464546
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||| ||| |||| |||||| ||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  40464671 tactccctccgg--tcctatttataagataaagttgattttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 40464574  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| || |||||||||||||||||||||    
T  40464573 tttaatttatctaaaaagtaaattgtct 40464546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 52114032 - 52114148
Alignment:
Q  207 gggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatc 298  Q
    ||||||||| |  |||||||| |||| |||||||||   ||||||||| |||||||||||| ||     ||||||||||||||||||||||| |||||||    
T  52114032 gggtcttatcttcaagagaaagttgattttttagatacattgaataatgtatgtatctagtaaagaacctaaaccaaatacataaattatttaatgtatc 52114131  T
Q  299 taaaaagtaaattgtct 315  Q
    |||||||||||||||||    
T  52114132 taaaaagtaaattgtct 52114148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 25846520 - 25846635
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||| ||| | |||| |||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||| |    
T  25846520 ggtcctatttataaaagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtattt 25846619  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  25846620 aaaaagtaaattgtct 25846635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 311
Target Start/End: Original strand, 44593210 - 44593321
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    ||||||||||| |||| ||| ||||||||||| ||   |||||||||||||||||||| ||||     ||||||||||||||||||||||| ||||||||    
T  44593210 ggtcttatttacaagaaaaagttgactttttaaatacattgaataatatatgtatctaatcaaaaacttaaaccaaatacataaattatttaatgtatct 44593309  T
Q  300 aaaaagtaaatt 311  Q
    ||||| ||||||    
T  44593310 aaaaattaaatt 44593321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 47450055 - 47449940
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| || ||||| |||| |||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  47450055 ggtcctatttacaatagaaagttgagtttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 47449956  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  47449955 aaaaagtaaattgtct 47449940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 42605841 - 42605951
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||| ||| |||| |||||||||   ||||||||| |||||||||||||||     ||||| ||||||||||||||||| |||||||||||||    
T  42605841 tatttacaagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacttaaactaaatacataaattattttatgtatctaaaaa 42605940  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  42605941 gtaaattgtct 42605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 1122414 - 1122305
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||||||||||||||   ||||| ||| |||||||||||||||     ||||  ||||||||||||||||| ||||||||    
T  1122414 ggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtatctagtcaagaacctaaaataaatacataaattatttaatgtatct 1122315  T
Q  300 aaaaagtaaa 309  Q
    ||||||||||    
T  1122314 aaaaagtaaa 1122305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 18765267 - 18765380
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| |||| |||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||| ||||    
T  18765267 ggtcatatttacaagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgcatct 18765366  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  18765367 aaaaagtaaattgt 18765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 8825848 - 8825762
Alignment:
Q  230 tgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaa 308  Q
    |||||||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| || ||||||||||||||    
T  8825848 tgactttttagatgcattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatatatctaaaaagtaa 8825762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 22003935 - 22003820
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||     ||||| ||||| ||||||||||  ||||||||    
T  22003935 ggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatct 22003836  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| | ||||||||    
T  22003835 aaaaaattaattgtct 22003820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 22011452 - 22011337
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||     ||||| ||||| ||||||||||  ||||||||    
T  22011452 ggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatct 22011353  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| | ||||||||    
T  22011352 aaaaaattaattgtct 22011337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 268 - 313
Target Start/End: Original strand, 40141951 - 40141996
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 313  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40141951 taaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 40141996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 313
Target Start/End: Original strand, 42225577 - 42225684
Alignment:
Q  214 atttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaag 305  Q
    ||||| |||| |||||| | |||||||||   ||||||||| ||||||||||||||||||     || ||||||||||||||||| ||||||| ||||||    
T  42225577 atttacaagaaaaaattaattttttagatacattgaataatgtatgtatctagtcaataacctaaactaaatacataaattatttaatgtatcaaaaaag 42225676  T
Q  306 taaattgt 313  Q
    ||||||||    
T  42225677 taaattgt 42225684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 3484403 - 3484356
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||    
T  3484403 taaaccaaatacataaactatttaatgtatctaaaaaattaattgtct 3484356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 13826246 - 13826141
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   ||||| ||| ||||||| |||||||     |||| ||||| |||||||||||| |||||  ||||||    
T  13826246 tatttacaagagaaagttgactttttagatacattgaagaatgtatgtatttagtcaagaacctaaatcaaattcataaattatttaatgtaaataaaaa 13826147  T
Q  305 gtaaat 310  Q
    ||||||    
T  13826146 gtaaat 13826141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 8987806 - 8987844
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagt 306  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  8987806 taaaccaaatacataaattattgaatgtatctaaaaagt 8987844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 16660357 - 16660406
Alignment:
Q  268 taaaccaaatacataaatt--atttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||  |||| ||||||||||||||||||| ||||    
T  16660357 taaaccaaatacataaattttatttaatgtatctaaaaagtaaatcgtct 16660406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 26123139 - 26123067
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa 267  Q
    ||||||||||||  || |||||| ||||||||  |||||||||||||   ||||||||| |||||||||||||||    
T  26123139 tactccctccgg--tcctatttacaagagaaagatgactttttagatacattgaataatgtatgtatctagtcaa 26123067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 55139244 - 55139199
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 313  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||||    
T  55139244 taaaacaaatacataaattattcaatgtatctaaaaagtcaattgt 55139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 11179 - 11054
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   |||||||||||||||||||| ||||     ||||||||||||||||||||    
T  11179 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatatatgtatctaatcaagaacttaaaccaaatacataaatta 11082  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  11081 tttaatgtatctaaaaagtaaattgtct 11054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 2339439 - 2339314
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  2339439 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 2339342  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  2339341 tttaatgtatctaaaaagtaaattgtct 2339314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 41915743 - 41915618
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   ||||||||| ||||||||||||||||||     |||||||||||||||||    
T  41915743 tactccctccgg--tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaataatctaaaccaaatacataaatta 41915646  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||| ||||||||||    
T  41915645 tttaatgtatctaaaaattaaattgtct 41915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 311
Target Start/End: Complemental strand, 33642597 - 33642486
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    ||||||||||| |||||||| |||| |||||||||   |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  33642597 ggtcttatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 33642498  T
Q  300 aaaaagtaaatt 311  Q
    ||||||||||||    
T  33642497 aaaaagtaaatt 33642486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 40465252 - 40465358
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||||||||||    
T  40465252 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 40465351  T
Q  305 gtaaatt 311  Q
    |||||||    
T  40465352 gtaaatt 40465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 34028537 - 34028409
Alignment:
Q  191 tatactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacata 282  Q
    |||| ||||||||||||  || |||||| |||||||| ||||| ||||||||   ||||||||| |||||||||||||||     |||||||||||||||    
T  34028537 tataatactccctccgg--tcctatttacaagagaaagttgaccttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacata 34028440  T
Q  283 aattatttgatgtatctaaaaagtaaattgt 313  Q
    |||||||| ||||||||||||||||||||||    
T  34028439 aattatttaatgtatctaaaaagtaaattgt 34028409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 22782021 - 22781908
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| |||| ||||| |||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  22782021 ggtcctatttataagagaaagttgattttttggatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 22781922  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  22781921 aaaaagtaaattgt 22781908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 12270069 - 12270180
Alignment:
Q  212 ttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaa 303  Q
    ||||||| |||||||| ||||||||||||||   | ||||||||||| ||| |||||||     ||||||||||||||||||||||| ||||||||||||    
T  12270069 ttatttacaagagaaagttgactttttagatacatcgaataatatatatatttagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaa 12270168  T
Q  304 agtaaattgtct 315  Q
    ||||||||||||    
T  12270169 agtaaattgtct 12270180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 25848106 - 25847991
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||| | ||||||||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||||||||    
T  25848106 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatct 25848007  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  25848006 aaaaagtaaattgtct 25847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 29563797 - 29563682
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   || |||||| |||||||||||| ||     ||||||||||||||||||||||| ||||||||    
T  29563797 ggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatct 29563698  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  29563697 aaaaagtaaattgtct 29563682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 30923930 - 30924045
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||| | ||||||||||||||   ||||||||| |||||||||| ||||     ||||||||||||||||||||||| ||||||||    
T  30923930 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatct 30924029  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  30924030 aaaaagtaaattgtct 30924045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 32159043 - 32159158
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   || |||||| |||||||||| ||||     ||||||||||||||||||||||| ||||||||    
T  32159043 ggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatct 32159142  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  32159143 aaaaagtaaattgtct 32159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 43135183 - 43135068
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  ||||||||    
T  43135183 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatct 43135084  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  43135083 aaaaagtaaattgtct 43135068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 2229069 - 2229194
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagatt---tgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||    |||||||| |||||||||||||||     ||||||||||||||||||||    
T  2229069 tactccctccgg--tcctatttacaagagacagttgactttttagatacaatgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 2229166  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  2229167 ttcaatgtatctaaaaagtaaattgtct 2229194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 42351197 - 42351322
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||  ||||||||||||||   || ||||||||||||||||||||||     |||| |||||| ||||||||    
T  42351197 tactccctccgg--tcttatttacaagagaatgttgactttttagatacattaaataatatatgtatctagtcaagaacctaaatcaaatatataaatta 42351294  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||| ||||||||||    
T  42351295 tttaatgtatctaaaaaataaattgtct 42351322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 45146014 - 45145893
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgta-tctagtcaataaaccaaatacataaattatttg 291  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   ||||||||| |||||| || ||    ||||||||| |||||||||||||     
T  45146014 tactccctccgg--tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtagtcaagaacctaaaccaaaaacataaattattta 45145917  T
Q  292 atgtatctaaaaagtaaattgtct 315  Q
    ||||||||||||||||||||||||    
T  45145916 atgtatctaaaaagtaaattgtct 45145893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 7668330 - 7668215
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||||||| ||||||| ||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||||||||    
T  7668330 ggtcctatttacaagagaaaattgtctttttaaatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatct 7668231  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  7668230 aaaaaataaattgtct 7668215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 37564640 - 37564755
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||||||||| ||||||||||| ||   ||||||||| |||| ||||||| ||     ||||||||||||||||||||||| |||||| |    
T  37564640 ggtcctatttataagagaaagttgactttttaaatacattgaataatgtatgcatctagttaagaacctaaaccaaatacataaattatttaatgtattt 37564739  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  37564740 aaaaagtaaattgtct 37564755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 40834270 - 40834171
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||||||| ||||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| |||||||||||||    
T  40834270 tatttataagagaaaattgtctttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 40834171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 41569105 - 41569218
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| |||| |||||||||   ||||||||| ||||||||||||||| ||     |||||||||||||||||||| || |||||    
T  41569105 ggtcctatttacaagagaaagttgattttttagatatattgaataatgtatgtatctagtcaagaacctcaaccaaatacataaattatttaatatatct 41569204  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  41569205 aaaaagtaaattgt 41569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 43295077 - 43295178
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||| || |||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||| ||||||    
T  43295077 tatttataagagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 43295176  T
Q  305 gt 306  Q
    ||    
T  43295177 gt 43295178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 11293196 - 11293311
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     |||||||  ||||||||| |||| |||||| |    
T  11293196 ggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatttacataaatgatttaatgtattt 11293295  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  11293296 aaaaagtaaattgtct 11293311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 42189942 - 42189827
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||||| || ||| ||||||||||||||   ||||||||| ||| |||||||||||     ||||||||||||||||||||||| || ||| |    
T  42189942 ggtcctatttatatgataaagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaattatttaatatattt 42189843  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  42189842 aaaaagtaaattgtct 42189827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 3799731 - 3799841
Alignment:
Q  214 atttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct-aaaaa 304  Q
    |||||||||||||| | | ||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||||| | |||||    
T  3799731 atttataagagaaagtcggctttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatttaaaaaa 3799830  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  3799831 gtaaattgtct 3799841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 8242357 - 8242247
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||| ||||| |||| |||||||||   ||||||||| |||||||||||||||     |||| ||||||||||||| |||| |||||| ||||||    
T  8242357 tatttataaaagaaatttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatcatttaatgtatttaaaaa 8242258  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  8242257 gtaaattgtct 8242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 27793348 - 27793225
Alignment:
Q  194 actactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaat 285  Q
    ||||||||||||||  || |||||| |||||||| ||||||||||||||   || |||||| ||| ||||| |||||     ||||||||||||||||||    
T  27793348 actactccctccgg--tcctatttacaagagaaagttgactttttagatatattcaataatgtatatatctggtcaagaacctaaaccaaatacataaat 27793251  T
Q  286 tatttgatgtatctaaaaagtaaatt 311  Q
    ||||| ||| ||||||||||||||||    
T  27793250 tatttaatgcatctaaaaagtaaatt 27793225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 25878186 - 25878293
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||||||||||||||||||| ||   ||||| ||| |||||||||||||||     |||| |||||||||||||||| | |||||||| ||||    
T  25878186 tatttataagagaaaattgactttttaaatacattgaagaatgtatgtatctagtcaagaacctaaatcaaatacataaattatataatgtatct-aaaa 25878284  T
Q  305 gtaaattgt 313  Q
    |||||||||    
T  25878285 gtaaattgt 25878293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 33837681 - 33837604
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||| |||||||||||||||     ||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  33837681 ttgaataatttatgtatctagtcaagaatctaaactaaatgcataaattatttaatgtatctaaaaagtaaattgtct 33837604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 29916665 - 29916553
Alignment:
Q  209 gtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatcta 300  Q
    |||||||||||||||||| |||||||||||| ||   ||||||| | || |||| |||||||     ||||||||||||||||||||||| |||||||||    
T  29916665 gtcttatttataagagaagattgactttttatatacattgaatattgta-gtatttagtcaagaacttaaaccaaatacataaattatttaatgtatcta 29916567  T
Q  301 -aaaagtaaattgt 313  Q
     |||||||||||||    
T  29916566 aaaaagtaaattgt 29916553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 34157810 - 34157696
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| |||| ||||| |||   | ||||||| ||||||| |||||||     ||||||||||||||||||||    
T  34157810 tactccctccgg--tcctatttacaagagaaatttgaatttttggatacatcgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 34157713  T
Q  288 tttgatgtatctaaaaa 304  Q
    ||| |||||||||||||    
T  34157712 tttaatgtatctaaaaa 34157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 24822862 - 24822826
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagattt 244  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  24822862 ggtcctatttataagaaaaaattgactttttagattt 24822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 38687909 - 38688033
Alignment:
Q  195 ctactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatt 286  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||||   ||||||||| || ||||||||||||     |||||||||||||||||||    
T  38687909 ctactccctccgg--tcttatttacaagagaaagttgactttttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 38688006  T
Q  287 atttgatgtatctaaaaagtaaattgt 313  Q
    |||| ||||||||||||||||||||||    
T  38688007 atttaatgtatctaaaaagtaaattgt 38688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 5970288 - 5970403
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| ||||||||| ||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| |||| |||    
T  5970288 ggtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtgtct 5970387  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||||||||||||||    
T  5970388 aaaaagtaaattgtct 5970403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 580425 - 580535
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||||||||||||||||||   ||||||||| |||||||| ||||||     ||||||||||||||||||||||| |||||||||||||    
T  580425 tatttacaagagaaaattgactttttagatacgttgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaa 580524  T
Q  305 gtaaattgtct 315  Q
     ||||||||||    
T  580525 ataaattgtct 580535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 21221249 - 21221143
Alignment:
Q  215 tttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaagt 306  Q
    |||||||||||||  | |||||||||||   ||||||||||||||||||||||||||||     |||||||||||||||||||| |||||||||||||||    
T  21221249 tttataagagaaagatcactttttagatacattgaataatatatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagt 21221150  T
Q  307 aaattgt 313  Q
    |||||||    
T  21221149 aaattgt 21221143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 31227410 - 31227297
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   || |||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  31227410 ggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 31227311  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  31227310 aaaaagtaaattgt 31227297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 31854400 - 31854501
Alignment:
Q  220 aagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaagtaaatt 311  Q
    |||||||| ||||||||||||||   ||||||||| ||||||||||||||||||     |||||||||||||||||||| ||||||||||||||||||||    
T  31854400 aagagaaagttgactttttagatacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 31854499  T
Q  312 gt 313  Q
    ||    
T  31854500 gt 31854501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 2385194 - 2385319
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||| ||||||||||||||    
T  2385194 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaatta 2385291  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||| ||||||||||    
T  2385292 tttaatgtatctaaaaattaaattgtct 2385319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 6246757 - 6246632
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||| ||||||||||||||   || |||||||||||||| | |||||     ||||||||||||||||||||    
T  6246757 tactccctccgg--tcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggtcaagaacctaaaccaaatacataaatta 6246660  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  6246659 tttaatgtatctaaaaagtaaattgtct 6246632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 36099636 - 36099511
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | |||| |||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  36099636 tactccctccgg--tcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 36099539  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  36099538 tttaatgtatctaaaaagtaaattgtct 36099511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 7350253 - 7350330
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7350253 ttgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtct 7350330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 315
Target Start/End: Complemental strand, 47949070 - 47948963
Alignment:
Q  216 ttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagta 307  Q
    |||||||||||| |||| |||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| ||||||||||||||||    
T  47949070 ttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagta 47948971  T
Q  308 aattgtct 315  Q
    ||||||||    
T  47948970 aattgtct 47948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 56216369 - 56216258
Alignment:
Q  212 ttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaa 303  Q
    |||||||||||||||| ||||||||||||||   ||||||||| ||||||| |||| ||      |||||||||||||||||||||| ||||||||||||    
T  56216369 ttatttataagagaaagttgactttttagatacattgaataatgtatgtatttagttaagaatccaaaccaaatacataaattatttaatgtatctaaaa 56216270  T
Q  304 agtaaattgtct 315  Q
    ||||||||||||    
T  56216269 agtaaattgtct 56216258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 2279658 - 2279548
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| ||||||||||||||   || |||||| ||||||||||||||      ||||||||||||||||||||||| |||||||||||||    
T  2279658 tatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaaaa 2279559  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  2279558 gtaaattgtct 2279548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 15170882 - 15171005
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| ||   |||||||||||||||| ||| ||||     |||| |||||||||||||||    
T  15170882 tactccctccgg--tcttatttacaagagaaaattgactttttaaatacattgaataatatatgtaactaatcaagaacataaatcaaatacataaatta 15170979  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||  ||||||||||||||||||||||    
T  15170980 ttcaatgtatctaaaaagtaaattgt 15171005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 19485721 - 19485598
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| ||||||||||||| |||||||||   ||||||||| |||||||||| ||||     ||||||||||||||||||||    
T  19485721 tactccctccgg--tcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaatta 19485624  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| |||||| |||||||||||||||    
T  19485623 tttaatgtatttaaaaagtaaattgt 19485598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 315
Target Start/End: Complemental strand, 23125784 - 23125670
Alignment:
Q  209 gtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatcta 300  Q
    |||||||||| |||||||| ||||  ||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| |||||||||    
T  23125784 gtcttatttacaagagaaagttgatattttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 23125685  T
Q  301 aaaagtaaattgtct 315  Q
    |||||||||||||||    
T  23125684 aaaagtaaattgtct 23125670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 39877537 - 39877432
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| |||||||||||| |   ||||||||| ||||||||||||||||||     |||||||||||||||||||| |||||||||||||    
T  39877537 tatttacaagagaaagttgactttttaggtacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaa 39877438  T
Q  305 gtaaat 310  Q
    ||||||    
T  39877437 gtaaat 39877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 4758776 - 4758901
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||| ||     |||| |||||||||||||||    
T  4758776 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaatcaaatacataaatta 4758873  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  4758874 tttaatgtatctaaaaagtaaattgtct 4758901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 3085881 - 3085996
Alignment:
Q  207 gggtcttatttataagagaaaattgactttttagat--ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatct 299  Q
    ||||| |||||| ||||||||| | ||||||||||   ||||||||| ||||||| ||||||||||     |||||||||||||||||||| ||||||||    
T  3085881 gggtcctatttacaagagaaaaataactttttagaacattgaataatgtatgtatttagtcaataacataaaccaaatacataaattatttaatgtatct 3085980  T
Q  300 aaaaagtaaattgtct 315  Q
    ||||| ||||||||||    
T  3085981 aaaaaataaattgtct 3085996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 53621327 - 53621452
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||||||||||||   ||||||||| |||||||||| | ||     ||||||||||||||||||||    
T  53621327 tactccctccgg--tcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatgaagaacctaaaccaaatacataaatta 53621424  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||  ||||||||||||||||||||||||    
T  53621425 ttcaatgtatctaaaaagtaaattgtct 53621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 18430302 - 18430379
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||| |||||||||||||||     |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  18430302 ttgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtct 18430379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 35329040 - 35328967
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaatt 311  Q
    ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||||||    
T  35329040 ttgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 35328967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 313
Target Start/End: Original strand, 2411856 - 2411962
Alignment:
Q  215 tttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagt 306  Q
    |||||||||||||  | |||||||| ||   ||||||||| |||||||||||||||     ||||| ||||||||||||||||| |||||||||||||||    
T  2411856 tttataagagaaagatcactttttaaatacattgaataatgtatgtatctagtcaagaatctaaactaaatacataaattatttaatgtatctaaaaagt 2411955  T
Q  307 aaattgt 313  Q
    |||||||    
T  2411956 aaattgt 2411962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 54612101 - 54612000
Alignment:
Q  210 tcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaataaaccaaatacataaattatttgatgtatctaaaaagt 306  Q
    |||||||||||||||||| ||||| ||||| ||   ||||||||| ||||||| |||      ||||||||||||||||||||| |||||||||||||||    
T  54612101 tcttatttataagagaaagttgaccttttaaatacattgaataatgtatgtatttagc-----aaccaaatacataaattatttaatgtatctaaaaagt 54612007  T
Q  307 aaattgt 313  Q
    |||||||    
T  54612006 aaattgt 54612000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 32517779 - 32517896
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacat-aaattatttgatgtat- 297  Q
    |||| ||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||     |||| ||||||||| ||||||||| || |||     
T  32517779 ggtcctatttataagagaaagttgactttttagatacattgaataatatatgtatctagtcaagaatctaaatcaaatacataaaattatttaatatata 32517878  T
Q  298 ctaaaaagtaaattgtct 315  Q
    ||||||| ||||||||||    
T  32517879 ctaaaaaataaattgtct 32517896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 55292121 - 55292234
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| ||| ||||||||| |     |||| |||||||||||||||||| ||||||||    
T  55292121 ggtcctatttacaagagaaatttgactttttagatacattgaataatgtatatatctagtcgagaacctaaatcaaatacataaattatttaatgtatct 55292220  T
Q  300 aaaaagtaaattgt 313  Q
    ||||| ||||||||    
T  55292221 aaaaaataaattgt 55292234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 49122535 - 49122644
Alignment:
Q  213 tatttataagagaaaattgactttttagat--ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaag 305  Q
    |||||| |||||| | |||||||||||||   ||||||||| |||||||||||| ||     ||||||||||| ||||||||||  ||||||||||||||    
T  49122535 tatttacaagagacagttgactttttagaacattgaataatgtatgtatctagttaagaacctaaaccaaatatataaattattcaatgtatctaaaaag 49122634  T
Q  306 taaattgtct 315  Q
    ||||||||||    
T  49122635 taaattgtct 49122644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 18135360 - 18135437
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||| |||||||||||||||     |||| |||||||||||||||||  ||||||||||||||||||||||||    
T  18135360 ttgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattattcaatgtatctaaaaagtaaattgtct 18135437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 52535962 - 52536073
Alignment:
Q  210 tcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaa 301  Q
    |||||||||||||| ||| || |||||||||||   ||||||||| |||||||||||| ||     |||| |||||||||||||||||| |||||| |||    
T  52535962 tcttatttataagaaaaagttaactttttagatacattgaataatgtatgtatctagttaaaaacctaaatcaaatacataaattatttaatgtatataa 52536061  T
Q  302 aaagtaaattgt 313  Q
    ||||| ||||||    
T  52536062 aaagttaattgt 52536073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 44199986 - 44200096
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||| |||| ||||| |||   ||||||||| ||| ||||||||||      |||||||||||||||||||||||  ||||||||||||    
T  44199986 tatttacaagagaaagttgatttttttgatatattgaataatgtatatatctagtcaggaatctaaaccaaatacataaattatttagtgtatctaaaaa 44200085  T
Q  305 gtaaattgtct 315  Q
    |||||||||||    
T  44200086 gtaaattgtct 44200096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 53303888 - 53303761
Alignment:
Q  193 tactactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaa 284  Q
    ||||||||||||||| |   |||||| |||||||||| |  |||||||||   ||||||||| ||||||| |||||||     |||||||||||||||||    
T  53303888 tactactccctccggtgc--tatttacaagagaaaatggtttttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaa 53303791  T
Q  285 ttatttgatgtatctaaaaagtaaattgtc 314  Q
    ||||||  |||||||||||| |||||||||    
T  53303790 ttatttagtgtatctaaaaaataaattgtc 53303761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 27006576 - 27006529
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  27006576 taaatcaaatacataaattatttaatgtatctaaaaagtaaattgtct 27006529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 51833083 - 51833036
Alignment:
Q  268 taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  51833083 taaaccaaatacataaattatttaatgtatctaaaaaataaattgtct 51833036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 20688555 - 20688455
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||| | ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||  ||||||||    
T  20688555 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatct 20688456  T
Q  300 a 300  Q
    |    
T  20688455 a 20688455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 38046744 - 38046638
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    ||||||||||| ||| |||| |||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||||| || ||||| ||||    
T  38046744 tatttataagataaagttgattttttagatacattgaataatgtatgtatttagtcaaaaatctaaaccaaatacataaattattttatatatctgaaaa 38046645  T
Q  305 gtaaatt 311  Q
     ||||||    
T  38046644 ataaatt 38046638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 39834375 - 39834298
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaagtaaattgtct 315  Q
    ||||||||| |||||||||| ||||     ||||| ||||| ||||||||||| ||||||||||||| ||||||||||    
T  39834375 ttgaataatgtatgtatctaatcaagaacctaaacaaaatatataaattatttaatgtatctaaaaaataaattgtct 39834298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 29833274 - 29833364
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattattt 290  Q
    |||| |||||| |||| ||||||||||||||||||   ||||| ||||||||||| |||||||     |||| ||||||||||||||||||    
T  29833274 ggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtatttagtcaagaacctaaatcaaatacataaattattt 29833364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 44111895 - 44111849
Alignment:
Q  195 ctactccctccggggtcttatttataagagaaaattgactttttagatt 243  Q
    |||||||||||||  |||||||||||||| ||| |||||||||||||||    
T  44111895 ctactccctccgg--tcttatttataagaaaaagttgactttttagatt 44111849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 21229326 - 21229262
Alignment:
Q  243 ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaa 302  Q
    ||||||||| ||||||| |||||||     ||||||||||||||||||||||| |||||| ||||    
T  21229326 ttgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatttaaa 21229262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 50121446 - 50121482
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagattt 244  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  50121446 ggtcttatttataagaaaaatttgactttttagattt 50121482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 53225793 - 53225748
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagatt 243  Q
    ||||||||||||  || ||||||||||| |||||||||||||||||||    
T  53225793 tactccctccgg--tcctatttataagaaaaaattgactttttagatt 53225748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 592 - 469
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   ||||||||| |||||||||||||||     ||||| ||||||||||||||    
T  592 tactccctccgg--tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaacgaaatacataaatta 495  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  494 tttaatgtatctaaaaagtaaattgt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 29383 - 29270
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| ||||||||||||||   ||||||||| |||||||||||||||     ||||||||||||||||||||||| ||||||||    
T  29383 ggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 29284  T
Q  300 aaaaagtaaattgt 313  Q
    ||||||||||||||    
T  29283 aaaaagtaaattgt 29270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 492304 - 492427
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||||| |||| |||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||    
T  492304 tactccctccgg--tcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 492401  T
Q  288 tttgatgtatctaaaaagtaaattgt 313  Q
    ||| ||||||||||||||||||||||    
T  492402 tttaatgtatctaaaaagtaaattgt 492427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 38974 - 38849
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||| | ||||| ||||| ||   ||||||||| |||||||||||||||     ||||||||||||||||||||    
T  38974 tactccctccgg--tcctatttacaagagacagttgacattttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 38877  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  38876 tttaatgtatctaaaaagtaaattgtct 38849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 36103 - 35978
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||   || ||||||  ||||||||||| ||     ||||| ||||||||||||||    
T  36103 tactccctccgg--tcctatttacaagagaaaattgactttttagatgcattcaataatgcatgtatctagttaagaacctaaacaaaatacataaatta 36006  T
Q  288 tttgatgtatctaaaaagtaaattgtct 315  Q
    ||| ||||||||||||||||||||||||    
T  36005 tttaatgtatctaaaaagtaaattgtct 35978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 77344 - 77458
Alignment:
Q  196 tactccctccggggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaatta 287  Q
    ||||||||||||  || ||||||||||||||| ||||||||| ||||   ||||||||| ||||||| |||||||     ||||||||||||||||||||    
T  77344 tactccctccgg--tcctatttataagagaaagttgacttttcagatacattgaataatttatgtatgtagtcaagaatctaaaccaaatacataaatta 77441  T
Q  288 tttgatgtatctaaaaa 304  Q
    ||| |||||||||||||    
T  77442 tttaatgtatctaaaaa 77458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 5350 - 5242
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| ||||||||||| |||||||||||   ||||||||||||||||| |||||||     ||||||||||| ||||||||||| || |||  |||||    
T  5350 tatttacaagagaaaattaactttttagataaattgaataatatatgtatttagtcaagaacctaaaccaaatatataaattatttaatatattaaaaaa 5251  T
Q  305 gtaaattgt 313  Q
    |||||||||    
T  5250 gtaaattgt 5242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 513 - 407
Alignment:
Q  213 tatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatctaaaaa 304  Q
    |||||| |||||||  ||||||||||||||   ||||||||| |||||||||||||||     ||||||| ||| ||||||||||| || ||||||||||    
T  513 tatttacaagagaaggttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatatatataaattatttaatatatctaaaaa 414  T
Q  305 gtaaatt 311  Q
    |||||||    
T  413 gtaaatt 407  T

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Target: scaffold0592; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 390 - 422
Alignment:
Q  210 tcttatttataagagaaaattgactttttagat 242  Q
    ||||||||||||||||||||| |||||||||||    
T  390 tcttatttataagagaaaatttactttttagat 422  T

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Target: scaffold0246 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 15293 - 15181
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatttgatgtatct 299  Q
    |||| |||||| |||||||| || |||||||||||   ||||||||| || |||| |||||||     ||||||||||||||||||||||| ||||||||    
T  15293 ggtcctatttacaagagaaagttaactttttagatacattgaataatgtacgtat-tagtcaagaacctaaaccaaatacataaattatttaatgtatct 15195  T
Q  300 aaaaagtaaattgt 313  Q
    |||||| |||||||    
T  15194 aaaaagcaaattgt 15181  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 3640 - 3764
Alignment:
Q  208 ggtcttatttataagagaaaattgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataa---------attattt 290  Q
    |||| ||||||||| ||||| ||||||||||||||   ||||||||| ||||||| |||||||     ||||||||||||||||         |||||||    
T  3640 ggtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatataaattattt 3739  T
Q  291 gatgtatctaaaaagtaaattgtct 315  Q
     ||||||||||||||||||||||||    
T  3740 aatgtatctaaaaagtaaattgtct 3764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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